cov    pid  1 [        .         .         .         .         :         .         .         . 80 
 1 1652242_gnl_PID 100.0% 100.0%    LAATNSDPN--QPTRLFVSNP--KVSEAAG-EAQFVIERTGD---LNKYVLVSYITQDMSGKAG-DRYLPI--AGQLIFN    
 2 1653629_gnl_PID 100.0%  65.3%    NTGNVGDIN--IATKLFVSSP--TASEALG-EVDFTIERTGD---LDKYVVVSYLTQDMDGKAG-DRYLPV--AGQLVFK    
 3 127793_sp_P2368 100.0%  25.7%    ATVTIFDDD--HAGIFTFEEPVTHVSESIG-IMEVKVLRTSG---ARGNVIVPYKTIEGTARGGGEDFEDT--CGELEFQ    
 4 1346653_sp_P487 100.0%  23.8%    ATVTILDDD--HAGIFSFQDRLLHVSECMG-TVDVRVVRSSG---ARGTVRLPYRTVDGTARGGGVHYEDA--CGELEFG    
 5 1947092/2-0     100.0%  22.0%    ATVMILDDD--HPGIFQIDEKEMSVTESSG-EVEVRIIRTSG---ARGCVKVPFHSVDGTATYG-KDYELV--DKDVIFD    
 6 1905892/2-0     100.0%  20.0%    ATVMILDDD--HAGIFAFTDSVFEITESVG-RFELKVMRYSG---ARGTVIVPYWTENDTATES-KDYEGA--RGELVFE    
 7 1009384/2-0     100.0%  19.0%    ATVIIVDDD--HAGSFGFLSEKFKCTESCG-SFVAEVIRSRG---ARGKVSIPYKTVDGAAKSP-QDYEHQ--EGVLKFA    
 8 1572830/2-0     100.0%  14.0%    ATIMILDDD--HAGVFGFEHDHFQVVENCG-HLSLQMKRHSG---ARGKVIIPFRTVEGTASAD-KHFEMK--EGEIVFE    
 9 1346648_sp_P487 100.0%  27.7%    VNTEVAEND--PVSKIFFEQGTYQCLENCG-TVALTIIRRGG--DLTNTVFVDFRTEDGTANAG-SDYEFT--EGTVVFK    
10 1346653_sp_P48b 100.0%  27.7%    DGAPDDEDD--GASRIFFEPSLYHCLENCG-SVLLSVACQGG--EGNSTFYVDYRTEDGSAKAG-SDYEYS--EGTLVFK    
11 1947092/1-101   100.0%  26.7%    IVIDQKPED--EITRVSFDPGHYTVMENVG-TFYGTVTREGG--DLTKTLYVDYKTEDGTANAG-SDYVYA--EGTLVFY    
12 1572830/1-101   100.0%  27.7%    QAQEKQSRD--NTCKIFLDPAHYTVLESVG-SFDVVVGRDGG--PDGLTVMVDYFTEDGSANAG-SDYIPV--KGTLTFY    
13 1009384/1-103   100.0%  19.4%    KLEPMVVQK--TMATVEFDPPHYTCLENVG-DVYLTVKCDRGSVPEDTTVTVHYRTIADTAQAE-SDFVHT--EGTITFE    
14 1905892/1-100   100.0%  27.0%    HAGDDEEAD--DPIRMYFEPGHYTVMENCG-EFEVRVVRRGD---ISTYASVEYETQDGTASAG-TDFVGR--KGLLSFP    
15 2460285/2-0      99.0%  15.7%    TQVVVLDPD---VVSVGFGRPNVTRNESDG-QFTMCVVKDRD---TAVPVVVTISTADGTATEG-QDFDPANVPATVIID    
16 2460291/1-101    99.0%  14.7%    TVVSILDTE---VLNVGFGRPSVTVNESDG-EFMMCVLKDRE---TVFPVEVTISTSSGTATEG-ADYDPANIPASITIP    
17 2460285/3-0      99.0%  15.7%    TMVIILDDD---VVSVQFEQPTYTYDETDG-SAQVCLVKDAE--TATSFTVDNIVTEDGTAMDG-VDYTGG--PYSVMFD    
18 2460291/4-0     100.0%  11.5%    VTVVIIDDDELQVITVQFEQSTYTAEESSG-VVQVCLVKDVE--TAESFTVDDITTSEGTATDG-VDYIGG--PYNVTFG    
19 2460289/3-0      99.0%  15.7%    TIVTLLDDD---IVLVEFEQATYNVIESTG-VAEVCLVKNAE--TAESFEVVGITTAEGTATEG-SDYTQG--PYSVTFG    
20 1246503_gnl_PID 100.0%  28.4%    LKIQDVDED--SKICLGACNVAHVVKENAG-FSRSFVTRRGG--KLKKPLQVHYETEDVTAKQG-DDYTAVK-DGILGFE    
21 1652714_gnl_PID 100.0%  29.7%    LRLVIPHNN--SQGSSQLQVSPIRVKETDG-EAVLLVRRTGN---IQEAVSFNYRTVDGSATAG-ADYVAQ--AGTLTFA    
22 2370303_gnl_PID  99.0%  13.3%    ADVEILDSG---MIFVMFAEPVYTYNEEDG-VGTIEIVKTGA---TSEPFTVRVYGGPSNQTDIERSADGIDIIVEFQAG    
23 484472_pir__JN0 100.0%  27.4%    VNITIIKEQ--ASGVVSFEQPEYSVSRGDQ-VARIPVIRHIL---DNGKSQVSYSTQDNTAHGH-RDYVPV--EGELLFH    
24 1185049/2-0     100.0%  22.5%    TLVTIKDKI--APSTIAMQSAVIRVNEGQW-LVEVPLVRSGD---LSKPARAQLPLDGMTPRWG-LDFLPWL-GQSVSWP    
25 1652030_gnl_PID  96.9%  18.6%    AIAGSVSSN----TTVGIAATGATGSENGPTPGEFTILRTGD---TS-TALDVTYSISGDAANG-TDYAAID-PTTVTIP    
26 1185049/1-99     98.0%  20.8%    LVAIQYPLP--PTGELSLTTSAANVEEGST--LTLAVQRKGG---SRGAASVSWSVQYGSADRQ--DLAPL--SGVLNWS    
   consensus/100%                   .................h......h.ct........h.p..............h.....s......ph........h.h.    
   consensus/90%                    ..h.....t......h.ht...hph.Es.s..h.h.l.+ptt....t..h...h.s.t.suptt..ca......h.l.h.    
   consensus/80%                    hhh..hcps....s.h.hp.s.hps.EssG..h.h.lh+pss...hpt.s.lsh.T.ssoApts.tDa..h...spl.a.    
   consensus/70%                    hhs.hh-ps...sshhthppshhps.EssG..hphplh+pus...hpthshlshhT.-uoAptG.pDa..h..tuplhFt    

                      cov    pid 81          .         1         .     ] 116
 1 1652242_gnl_PID 100.0% 100.0%    PGE-NQKNITVKIP----TDSVYTA--DRQFSLLVS    
 2 1653629_gnl_PID 100.0%  65.3%    PGE-TKKTIKVKVP----NDSIYTG--DKQFGLLVS    
 3 127793_sp_P2368 100.0%  25.7%    NDE-IVKTISVKVI----DDEEYEK--NKTFFLEIG    
 4 1346653_sp_P487 100.0%  23.8%    DDE-TMKTLQVKIV----DDEEYEK--KDNFFIELG    
 5 1947092/2-0     100.0%  22.0%    NDE-TEKFLRVRVV----DDEEYEK--NETFFIWLD    
 6 1905892/2-0     100.0%  20.0%    NNE-SEKFIDLFIL----EESSYEK--DVSFKVHIG    
 7 1009384/2-0     100.0%  19.0%    DEQ-SKAEIYIPIV----NDDEYEK--HEDFYIELG    
 8 1572830/2-0     100.0%  14.0%    DNQ-TEALVEIGIV----DTEQYER--SDYFYIELS    
 9 1346648_sp_P487 100.0%  27.7%    PGE-TQKEIRVGII----DDDIFEE--DENFLVHLS    
10 1346653_sp_P48b 100.0%  27.7%    PGE-TQKELRIGII----DDDIFEE--DEHFFVRLL    
11 1947092/1-101   100.0%  26.7%    PME-THKQFPISII----DDDIFEE--DEHFYIRLS    
12 1572830/1-101   100.0%  27.7%    PED-KHQKVTIEVV----DDDVFEE--DEHFYLRLC    
13 1009384/1-103   100.0%  19.4%    PGQ-TEQKIKVGIV----DNDIYED--DEQFMVRLS    
14 1905892/1-100   100.0%  27.0%    PGV-DEQRFRIEVI----DDDVFEE--DECFYIRLF    
15 2460285/2-0      99.0%  15.7%    PDS-AMECFDSNAI----LDDEVAL--EDEEFFLLL    
16 2460291/1-101    99.0%  14.7%    ANE-DMTCFTTDTV----LDDLIAL--EEDEVFSLD    
17 2460285/3-0      99.0%  15.7%    APADDIKCIMINLT----VDNVDED--TENFVVSLA    
18 2460291/4-0     100.0%  11.5%    MQANDRQCIDIPLI----ADDENEI--SENFTVSLN    
19 2460289/3-0      99.0%  15.7%    TDAGDRQCINIPVV----TDDMNEG--SEDFSVVLA    
20 1246503_gnl_PID 100.0%  28.4%    GQE-YEKYIDIDVI----DDKMDEK--DEAFIIELL    
21 1652714_gnl_PID 100.0%  29.7%    PGE-VFKEIRIAIL----DDDITERR-AEKFRVVIT    
22 2370303_gnl_PID  99.0%  13.3%    PSAPDSIFINFTLT----DDEVALEA-DETYDVRFE    
23 484472_pir__JN0 100.0%  27.4%    PGE-TWKELQVKLLELQEVDSLLRGRQVRRFQVQLS    
24 1185049/2-0     100.0%  22.5%    AGEGGVKSIKVLFI----DDWFVEP--TEQFRVSLS    
25 1652030_gnl_PID  96.9%  18.6%    AGQ-SQVKISINPI----DDVIIES--TESIVITLT    
26 1185049/1-99     98.0%  20.8%    DGDEQDKTLQIPTL----SDTKNEG--DETFTLLLQ    
   consensus/100%                   ........h..........p............h.h.    
   consensus/90%                    stt...t.h.h.hh.....-p..t...pcph.l.l.    
   consensus/80%                    ssp.s.pplpl.ll....sDp.hct..s-pFhl.lt    
   consensus/70%                    ssp.s.pplpltll....sDs.hEt..s-pFhlpLs