cov pid 1 [ . . . . : . . ] 74 1 5880612/1-0 100.0% 100.0% YDAWVATQVYV--------AGDRVEVDG---RVFEA------QWWTQG----QHPLVSG-------PWGSWMEV 2 1176231/6-0 100.0% 37.7% AKAWSASTVYV--------KGDRVVVDG---QAYEA------LFWTQS----DNPALVANQNATGSNSRPWKPL 3 3193265/1-47 100.0% 45.7% YNEWKDTAVYT--------GGDRVVFNG---KVYEA------KWWTKG----EQPDQAG-------ESGVWKLI 4 1845337/1-49 100.0% 39.6% YDEWKETNAYT--------GGERVAFNG---KVYEA------KWWTKG---DRRINPVNG------AYGGWSEA 5 3928777/1-0 93.5% 39.1% STTWNADAIYT--------GGDTVLYNG---VEYKA------KWWTQG----DRPD----------LGGPWEEV 6 5360796/1-51 100.0% 26.0% SSPWTAARIYE--------AGNVVSFDG---HDYTA------AYRSQG----NAPATASGEAG---SGQPWVAG 7 458468/2-0 100.0% 32.0% ALAWAAGTAYS--------AGATVSYAG---TNYRA------NYWTQG----DNPSTSSGGAG---TGKPWTSQ 8 423799/1-44 93.5% 43.5% YPTWDRSTVYV--------GGDRVIHNS---NVLEA------KWWTQG----EEPG----------TADVWKAV 9 483820/1-0 95.7% 34.8% HPAWSAGTVYN--------TNDKVSHKQ---LVWQA------KYWTQG----NEPSR---------TADQWKLV 10 3928777/2-0 91.3% 33.3% VRAWRADLVYN--------TGDKVTHNN---NTYTA------KWWTKG----EEPG----------VADVWAK- 11 2661684/1-47 100.0% 32.6% AVPWNSGAIYT--------GGQQVSHEG---HTWKA------KWWTTG----EEPGTTG-------QWGVWQDL 12 1763985/1-47 100.0% 43.5% AAAWDANTVYV--------EGDQVSHDG---ATWVA------GWYTRG----EEPGTTG-------EWGVWKKA 13 483820/2-0 93.5% 32.6% QLGWDAGVVYN--------GGDVTSHNG---RKWKA------QYWTKG----DEPG----------KAAVWVDQ 14 3928776/2-0 93.5% 32.6% DDAWLSSKAYS--------AGDIVSHNS---QKYQA------RWWTKG----DEPG----------TASVWQTL 15 3928776/1-0 93.5% 37.0% VPAWDASKAYN--------AGDKVSYLG---TVYKA------KWWVQG----EKPN----------SSDAWQSL 16 4587324/2-0 100.0% 34.0% YTAWSSSAAYN--------GGDKVTYNG---RNYQA------KWWTQN----NIPSSNTG------DGLPWTDL 17 2126245/2-0 100.0% 31.9% LPAWNTGTAYN--------GGVQVSYNG---HTYTA------KWWTQG----NIPSSSTG------DGQPWTDN 18 2662299/1-44 93.5% 32.6% ATAWSSSSVYT--------NGGTVSYNG---RNYTA------KWWTQN----ERPG----------TSDVWADK 19 2865165/1-48 100.0% 31.9% LTQWQSQQVYT--------GGDAVTYQS---AKYTA------KWWTQN----QNPAQNSN------TYDVWQAN 20 5921751/1-48 100.0% 25.5% LAEWQSDTIYT--------GGDQVQYNG---SAYQA------NYWTQN----NDPEQFSG------DYAQWKLL 21 3928775/1-0 97.8% 25.5% IAEWQSGVAYT--------GGQQVQKAN---TAYEA------KWWTQ-----ADPVTHSG------QYQEWKNL 22 2696017/1-46 97.8% 37.0% YPTYDSKTVYN--------GGDIVVYNG---ETYRC------KWWTQG----EIPGSS--------EWGAWEKI 23 6580045/1-43 91.3% 30.4% YPKYEPGKTYN--------QGDVVEYNG---KIWRV------KYWTQ-----SVPG----------SDDSWELV 24 121781/2-0 93.5% 39.1% YPAWDPTQIYT---------NEIVYHNG---QLWQA------KWWTQN----QEPGY---------PYGPWEPL 25 5880612/2-0 95.7% 39.1% VLAWTSSWVYP--------GGDVVAYDG---SLWKA------KWWTRN----QAPGD---------VYGPWQKV 26 6562005/1-46 97.8% 34.8% AAPWSATATYL--------GGSKVSHGG---ISYKA------KWWTLN----EKPGAS--------QWGPWEAT 27 6523073/3-0 100.0% 35.4% AVTWSAAAVYT--------GGAVVAHAG---SSYKA------KWWTQG----EVPGSGAA-----NAWGSPILC 28 6523073/1-0 97.8% 26.1% CATVAPASSYS--------SNAVVSHQS---VNYSA------KWWTQN----NVPGSD--------PWGPWTSQ 29 1176231/3-0 97.8% 18.0% VVAWKGQEGSS---------TWYVIYNG---GIYKN------AWWVGA---ANCPGDAKEND----ASNPWRYV 30 1176231/1-0 97.8% 22.0% MEAWNNQQGGN---------KYQVIFDG---KIYEN------AWWVSS---TNCPGKAKAND----ATNPWRLK 31 1176231/4-0 97.8% 18.0% LQAWSGQEGSE---------IYHVIFNG---NVYKN------AWWVGS---KDCPRGTSAEN----SNNPWRLE 32 6649589/1-48 93.5% 12.0% AAAWAEGNTYT--------ANSLASYQS---TNYKAL--VTHTAYVGA---NWNPAA---------SPTLCLT- 33 2126242/1-0 95.7% 19.6% APAWQEGNTYT--------AGTVVTYNG---HDYQAL--VTHTAYVGA---AWNPSS---------TPTLWKDL 34 458468/1-49 95.7% 17.6% CVPWQEGGTYN--------AGTVVTYLG---GNYTAL--VTQTDHVGS---GWNPVS---------TPSLWSAG 35 4115619/1-0 93.5% 19.6% YPVWQPDTTYA--------AGTIVYYQG---HDYKAL--VTQTDYSST---GWNPT----------VASLWQDL 36 CHI1_BACCI/1-47 93.5% 18.0% VSAWQVNTAYT--------AGQLVTYNG---KTYKCL--QPHTSLAG-----WEPSN---------VPALWQLQ 37 CHID_BACCI/1-47 93.5% 22.0% AAQWQAGTAYK--------QGDLVTYLN---KDYECI--QPHTALTG-----WEPSN---------VPALWKYV 38 Q54442/1-47 93.5% 18.0% APEWQNNHSYK--------AGDVVSYKG---KKYTCI--QAHTSNAG-----WTPDA---------AFTLWQLI 39 O30678/1-46 93.5% 18.4% APEWNAAVIYL--------SGTTLQKGG---VLYRA---NQDIWNAPP----DHPA----------GAPYYTNL 40 2842409/1-54 100.0% 28.3% YQQWIATQIYT--------EGNLVSHKG---VDYRA------NHWSQG----DEPVCLPPPDSMVSRGRCWLPD 41 3928775/2-0 91.3% 28.6% QTDWAGNPSHA--------AGGDLMVDGASTAVYKA------KWWTS-----TEPG----------TSADWDSV 42 5921751/2-0 95.7% 25.0% VVEWVPGSTQV-------SDGTTVTYNG---KCFVAQ-----NSPGVW----ESPTQ---------TNWFWEEV 43 1763985/2-0 93.5% 20.4% YPPYAAGTNYE--------AGDIVVGNDN--GLYECKPWPYTAWCASA---SYAPG----------DSLYWQNA 44 3851166/2-0 93.5% 15.1% LPVYSVGTAYS--------AGQLVQNKN---QKYRCD---IAGWCSSSSGWAYEPG----------VGSYWKEA 45 1176231/2-0 97.8% 20.0% VVAWNKQQGGQ--------TWYVVFNG----AVYKN------AWWVASS---NCPGDAKSN----DASNPWRYV 46 Q9XA22/1-47 93.5% 22.0% GGTWASGHAYT--------SGDRVTYGG---RSYRC--LQAHTAMTGW----EPPN----------VPALWQSE 47 Q9XA96/1-47 93.5% 28.0% ADAWTAGRVYE--------VGTTVSYDG---VRYRC--LQSHQAQGVG----SPAS----------VPALWQRV 48 PRTC_STRGR/1-45 89.1% 16.7% --TWAVGTAYA--------AGATVTYGG---ATYRC--LQAHTAQPGW----TPAD----------VPALWQRV 49 Q59929/1-43 93.5% 23.9% APAYVPGTTYA--------QGALVSYQG---YVWQT------KWGYIT----SAPG----------SDSAWLMV 50 Q9Z493/1-46 91.3% 26.0% IAEWNATTIYN--------AGNKLVYQG---RLYQA---TTSIWNTPPT---HCP-----------SCGYYQDP 51 3851166/1-48 91.3% 21.6% VPVWDSSTVYV--------GSDKVQKTN---TAYQA-----RYWTQGNDPVTHFG-----------QWDAWQIV 52 GUNZ_ERWCH/1-44 91.3% 25.0% SKDWAGGQPTH------NEAGQSIVYKG---NLYTA------NWYTA-----SVPG----------SDSSWTQV 53 O86099/1-44 91.3% 16.7% NKDYSGGPFTH------NNTDDKMQYQG---NAYSA------NWYTN-----SLPG----------SDASWTLL 54 1176231/1-45 93.5% 16.7% ADGFQASKAYS--------ADSIVDYND---AHYKT----SVDQDAWG----FVPG----------GDNPWKKY 55 Q9Z4P2/1-45 93.5% 25.0% YPSWVAGRSYA--------AGDIVRYTD--GKAYIAE-----HANPG-----YDPTI---------STWYWEPY 56 AAF00931/1-53 93.5% 12.5% AATWTLEFDLPAGTTISSSWDADVTRNG---NHYTAK----SKSWAGP----FAPG----------ASQTWGYI consensus/100% ...h..t................h.........h.s...................................... consensus/90% ...a..t..h..........st.l.hts.....aps......t..s........Ps............t.W... consensus/80% hstWtsstsYs........sushV.apu...t.Yps......thhst.......Ps..........s.s.Wp.. consensus/70% hssWpsspsYs........sGshVtasG...thYpA......paasts....ptPs..........sss.Wp.h