Family alignment for the CpcD domain, displayed in

                                            cov    pid  1 [        .         .         .         .         :         .] 61
 1 64471.sync_1003_from_12_to_59         100.0% 100.0%    ERAFTIVFTGLGG-----------RRAELSRLN--VSYGRLRDTICVLLSRGARIQSVSPA   
 2 316279.Syncc9902_0749_from_13_to_62    97.9%  29.4%    SGLFTVVASGRQAG--------SRPTVVQSYT---VPLRQLSTTFKQITASGARILSVTAA   
 3 110662.Syncc9605_1917_from_13_to_62    97.9%  23.5%    EALFTVVASGPHVG--------SQPSVVQTYT---VGMNQFSALFKRLGASGAKILSVNGV   
 4 84588.SYNW0751_from_13_to_62           97.9%  33.3%    SSLFTVVASGIQAG--------SGPSVIRTYR---VAMSGLNDLYKRLAASGARILSVSPA   
 5 1148.ssr3383_from_1_to_56             100.0%  17.9%    MRMFRITACVPSQT-----RIRTQRELQNTYFTKLVPYDNWFREQQRIMKMGGKIVKVELA   
 6 251221.gvip174_from_2_to_57           100.0%  14.3%    SRYFKVTACIPSLK-----RVRTGRELQNTFFTKLVPYENWFTEQQRIQKAGGKVLSVKLF   
 7 110662.Syncc9605_2199_from_1_to_56    100.0%  16.1%    MRLFKVTACIPSPE-----KVRTQRELQNTFFTKWVPYDSWFAEQQRIQKQGGRIIKVELC   
 8 251221.gvip181_from_227_to_283        100.0%  12.3%    SKVLRITVGQAPVP---TDGLDTYDPSDSSYSVV-VPLNRMLTEMQNIKRKGGRILNITSI   
 9 251221.gvip184.1_from_13_to_68        100.0%  16.1%    RKVFKITVAQFPDA----DGLDTDNLSQSNYFVT-VPLARLLPEMQLIKNKGGKVLSVEPV   
10 316279.Syncc9902_1899_from_6_to_54    100.0%  28.6%    GTQFTVQVSALNRS----------RPSLATHFK--VPFNNLSSGMRVMHRTGFRINSVSTA   
11 203124.Tery_0986_from_17_to_67        100.0%  25.5%    DRIIEIEVTGVCRQ--------DFKRVSTYKKK--VSHKRMNEALREIYSLGGKIVSVTLL   
12 1148.sll1579_from_220_to_273           97.9%  18.2%    NQMYRLQVIQGAAP----GRGTRVRRGKAEYL---VSYDNLSAKLQQINRQGDTVTMISLA   
13 203124.Tery_0985_from_212_to_263      100.0%  15.4%    SKSFLIEFLSRTAD-------ARLNRRGKRKRV--VTYSQMNQQVRNIHRSGGKIVKITEL   
14 203124.Tery_0999_from_226_to_277      100.0%  19.2%    GKRFRIVYTTSKVS-------ARLNRLSKKELI--INYTEMSPFVQRIHQTGGKIISITEK   
15 203124.Tery_4105_from_200_to_252       97.9%  14.8%    NRVKRFQISVTKTG-----IGPVVKKSATTYT---VSYEQLSSKINSIQRTGGKILKITEV   
16 251221.gvip184_from_17_to_66           97.9%  21.6%    NRTVVIEVTGMRQD--------RMRRSNTTFK---VPHARMSQTMQLINRMGGKVVGVTLP   
17 321332.CYB_0170_from_63_to_112         97.9%  25.5%    DKIFAIKVSGLVGG--------GVRRSVVEYK---VPFSRLSQEVKRITQMGGKIVSIAES   
18 1140.Synpcc7942_1051_from_17_to_75    100.0%  23.7%    SRVFVYEVEGLHQSDQTDLNRYPVRQSGTVQFK--VPYARMNEELRRINRLGARIVSIKPL   
19 197221.tlr1211_from_9_to_67           100.0%  22.0%    SRMFRYEVVGLRQTAETEKTNYAIRNSGSQFFN--VPYDRMNQFMQQITRWGGKIVSIQPL   
20 103690.asr0531_from_17_to_75          100.0%  16.9%    SRVFRYEVVGLRQSSETDKNKYNIRNSGSVFIT--VPYSRMNEEYQRITRLGGKIVKIEQL   
21 197221.tsr1960_from_17_to_75          100.0%  22.0%    ARVFRYEVVGLRQNEETDRMEFPIRRSGSTFIT--VPYNRMNEEMQRITRMGGKIVSITPV   
22 103690.all4121_from_17_to_75          100.0%  16.9%    SRVFVYEVVGMRQNEETDQTNYPIRKSGSVFIR--VPYNRMNQEMQRITRLGGKIVSIQTV   
23 203124.Tery_3658_from_23_to_81        100.0%  20.3%    NRTFVYEVEGLRQSQTAGELNNPIRRSGTVYIT--VPYSRMNQEMRRITGMGGKILSIKTL   
24 1148.slr1643_from_18_to_76            100.0%  20.3%    NRLFVYEVIGLSQSTMTDGLDYPIRRSGSTFIT--VPLKRMNQEMRRITRMGGKIVSIKPL   
25 1148.ssl3093_from_17_to_75            100.0%  22.0%    NRVFVYEVSGLRQTDANENSAHDIRRSGSVFIK--VPYARMNDEMRRISRLGGTIVNIRPY   
26 1140.Synpcc7942_0978_from_17_to_74    100.0%  25.9%    NRLFIYEVIGLRQA-EGEPSDSSIRRSGSTFFK--VPYSRMNQEMQRILRLGGKIVSIRPA   
27 1140.Synpcc7942_1049_from_219_to_273   97.9%  26.8%    DQLFRVQVQQQGVT---ARTSNRIRRSNATYF---VSYEKLNATLQRVHAQGGRIVSITPA   
28 32051.SynWH7803_1560_from_13_to_62     97.9%  41.2%    ERVFTLVVVGLQSS--------NQRRSEQTFT---VSYDRLQSTVQRINACGGRILSVTAG   
29 32051.SynWH7803_0501_from_195_to_245   97.9%  30.8%    GNRFTVLWTSRVQL-------GAVRRSAQRSV---VSYSSLSRTIQSIQAQGGRILSIANA   
30 316278.SynRCC307_2040_from_193_to_243  97.9%  34.6%    SDTFTILWTSGRQI-------GANRRASQRSV---VKQTSMSMTIQGILARGGRIQSIQPN   
31 64471.sync_0511_from_194_to_244        97.9%  28.8%    GGALTISWTSRKQI-------GANRRVGQKSV---VSQASMSSTIKSILAQGGKILSITKA   
32 316279.Syncc9902_1885_from_194_to_244  97.9%  32.7%    ANALRITWTSGRQI-------GANRRAVQKSV---VSQTSMSATIQSILKQGGRISSISKA   
33 84588.SYNW2001_from_194_to_244         97.9%  28.8%    ANSLTINWTSRRQV-------GANRRAVQKSV---VNQTSMSATIRSILSQGGKILSIAKA   
34 316278.SynRCC307_0760_from_13_to_62    97.9%  31.4%    PRMFAIEVAGMSGA--------GVKRSNEVLK---VSYDQLNSVMRNTGRSGARIVRVTPI   
35 251221.gvip182_from_204_to_254         97.9%  21.2%    AKSFRIVVSGAKYT-------GRLRRSTVEYL---VPANHMTAQIQRINRTSGTIVSITEV   
36 251221.gvip183_from_203_to_253         97.9%  19.2%    AKRFRITVAKSNVG-------PRVRYSNIEYV---VSYDKMTQQVQNIHKAGGRIVAISEV   
37 316278.SynRCC307_2039_from_495_to_545  97.9%  23.1%    KKRFRIVVAAQAAR-------SRQRTANSTYL---VSGKDMSSQMKYIHARGGKIVSITEV   
38 32051.SynWH7803_0502_from_495_to_545   97.9%  25.0%    TKRFRIVVNAQPRG-------GRQRTPNASYL---VSGKDMTSQLKYIHARGGRIVSITEV   
39 103690.alr0525_from_226_to_278         97.9%  29.6%    NRMFVIEAIAGGLN-----TNVAVRRSRQVYT---VSYERLSATYQEIHKRGGKIVKISQV   
40 32051.SynWH7803_0503_from_238_to_293   97.9%  14.0%    GKTYRVEVTAYSAN--NVRRISRYTRSNRVYF---VPFDKLSEQFKRIHAEGGKISSITPV   
41 203124.Tery_4104_from_233_to_288       97.9%  17.5%    GKVYRVEVTAYRSK--VVNRVSRFRRSNQVFL---VPFDQLSKEYQRIHRQGGVIASITPI   
42 1148.sll1580_from_236_to_288           97.9%  20.4%    SKLFRVEITAISAP-----GYPKVRRSNKAVI---VPFEQLNQTLQQINRLGGKVASITPA   
43 1140.Synpcc7942_1050_from_235_to_287   97.9%  29.6%    SRIFRVEIAAISKP-----GFPSVRRSNRSLL---VPYEQLNNTLQQVNRSGGRVVSVAPA   
44 103690.alr0530_from_234_to_286         97.9%  29.6%    DRVYRLEVTGIRSP-----GYPSVRRSSTVFI---VPYERLSDKIQQVHKQGGKIVSVTSA   
45 197221.tlr1959_from_235_to_287         97.9%  33.3%    GRVYRIEVAGIRQP-----GYPGVRRSSTAFL---VPYEQLSAKMQQLQRTGARIISVNPA   
46 321327.CYA_2041_from_228_to_285        97.9%  30.5%    DRMFCIEVTRLLNPPSALATSSRVRKSNQQIF---VSADQLSATMQRLLKSGAKIVSVRSA   
47 321332.CYB_0941_from_17_to_74          97.9%  27.1%    SRVYRVEYTGLLNPPDALATSAKVRRSTLSTT---VPYSRLSAEMQRILRMGGKIVQVTAL   
   consensus/100%                                         .t.h.h.h...........................l..tth....p.h.t.u.hl..lt..   
   consensus/90%                                          tphhhh.h.t..............pp.....h...Vshtph.t.hp.l.t.Gu+l.plp.h   
   consensus/80%                                          sphath.hsshtt.........t.+pstp.hh...Vshpphstphppl.t.Gu+Ilslp.h   
   consensus/70%                                          s+hFplpssuhpts........thRcuspshh...VsasphspphppIpp.GG+IlSls.s