cov pid 1 [ . . . . : . . . 80 1 G1D5R6_9CAUD 100.0% 100.0% -------------------MTDDL------------------------L--------------------------AEL-- 2 K0JV00_SACES 94.9% 26.9% MWTRSLRLAGCVVWGELERLTRGLPRSW---------------------------------------------------- 3 Q5NWK4_AROAE 97.6% 20.2% -------------------MSRPLPPAS----------------VVGRV------------------TIVPQSP-LPALF 4 A1VX29_POLNA 97.6% 19.4% -------------------MPGAAP--------------------------------------------------PPLKT 5 K9W5Y0_9CYAN 95.9% 17.1% M-----RL-------NSDSWRREISSHLTNYCMVASLLKNHEIIMVTLI--AVFVIMDDS-------KLVPQLP-DLL-- 6 K9T4A3_9CYAN 95.6% 18.9% -------------------MNNSL-------------------------------------------KLASTLP-SLA-- 7 Q8YJY5_NOSS1 96.2% 17.4% -------------------MPNEPVW--------------------GELVKVELEACLDA-------PIARYFD-AQL-- 8 K9VUP6_9CYAN 95.6% 19.0% -------------------MKAELSEALPS----------------KRI--ARLEANLDA-------KIERYFD-T-L-- 9 K9URP8_9CHRO 95.6% 16.6% -------------------MRQDLPT-----------------------------------------QIFPNPP-SPL-- 10 K9UFH0_9CHRO 97.3% 18.3% -------------------MARDLPA----------------------I------------------KIVRTTP-PNL-- 11 A8ZKE4_ACAM1 97.6% 17.2% -------------------MDERYRW-----------------------------------------DAIAMET-SGLVR 12 F4F1H5_VERMA 98.3% 22.3% -------------------MAVSN---------------------------------------------------TPVLF 13 K9X6D5_9NOST 94.5% 18.7% -------------------M----------------------------------VYSDSSA------PLPPIKL-IPL-- 14 K9WQD3_9CYAN 95.9% 22.0% -------------------M-RSLPHSF--------------------I----MSASPDSS------SPSPRSP-APV-- 15 A8ZL79_ACAM1 94.5% 10.4% -------------------M-----------------------------------------------AIPEVNL-IVL-- 16 Q11AK3_CHESB 94.5% 14.1% -------------------MTDNLALSFVMY-------------FYGTMASLVDQNTEKRTQH---GSARPQKT-PPG-- 17 A0A085BQR5_9RHOB 93.9% 14.7% -------------------MLSDM-----------------------------FKNTEKSS------SEPANAS-SPN-- 18 E3J1K8_FRASU 95.9% 15.9% -------------------MPSGPGPAV------------------GPV----DPAGPERSRQPGAAPAGAALP-VPR-- 19 R7CPI2_9FIRM 97.6% 16.9% -------------------MDGNNFY----------------------I--------------------------SDF-- 20 E2SEC7_9ACTN 95.2% 18.2% M---------------NPLMIAALPA-----------------------------------------SARPTFP-PTT-- 21 Q881C8_PSESM 96.9% 15.0% -------------------MPQDPHT--------------------------------DQT------ARVISQPSLPD-- 22 D3VFH9_XENNA 96.6% 17.7% -------------------MTRHNKNKDHNE--------NHD--DKNSL--IVLRSSPQKREM----VGALSVPGNPI-- 23 K9ZC75_ANACC 96.9% 17.3% -------------------MSESTDI-----------------------------DEISAA------SLGLTAP-IPI-- 24 K9VRB2_9CYAN 95.6% 19.2% -----------------------------------------------------MNAVTSDL------TLLLPQP-LPL-- 25 K9QML7_NOSS7 97.6% 18.0% -------------------MSDEKPQ----------------------S--VYANSNFSPE------SLALTQP-VPL-- 26 K9WS20_9CYAN 96.9% 19.5% -------------------MTE-------------------------------IEQSTEQS------ELVLTTP-TPL-- consensus/100% ................................................................................ consensus/90% ...................h............................................................ consensus/80% ...................M.tt......................................................h.. consensus/70% ...................M.tt.............................................h....s.ssh.. cov pid 81 . 1 . . . . : . 160 1 G1D5R6_9CAUD 100.0% 100.0% --KDSWLM-----------------------------------------------------------ELRAARKSAETIR 2 K0JV00_SACES 94.9% 26.9% ----------------------------------------------------------AGFMRDWDRSLRSANRPETTRY 3 Q5NWK4_AROAE 97.6% 20.2% -CSDEAAA------------------------------------------------------RRFVEFFTANIRNPNTRR 4 A1VX29_POLNA 97.6% 19.4% RDLAAPALAR---------------------ALTAPEFARL-------------------AEVPPEAQWFANLDSAQTRR 5 K9W5Y0_9CYAN 95.9% 17.1% --------------------------------------------------------MLANQTPDVLRDFVADKRSPKTKS 6 K9T4A3_9CYAN 95.6% 18.9% --------------------------------------------------------S--FVERDILQELLADKKSPNTRR 7 Q8YJY5_NOSS1 96.2% 17.4% -----------------------------------------------------------DKDPDVLAQLLADKRNPNTRR 8 K9VUP6_9CYAN 95.6% 19.0% -----------------------------------------------------------DTDPDVLKQLLADKRSENTRR 9 K9URP8_9CHRO 95.6% 16.6% -------------------------------------------------------ES--GEAQKLWSEFLQLNISPNTQH 10 K9UFH0_9CHRO 97.3% 18.3% --VGASAV-------------------------------------------DER-LTVKPVAPGVWDEFLQLQISPATRR 11 A8ZKE4_ACAM1 97.6% 17.2% LEIDESA-----------------------------------------------------VDVDLLRAVLVEKTKPSTRE 12 F4F1H5_VERMA 98.3% 22.3% RPPDHPALPG-------------------------------------------------GPIAVTEAWLRNRRLSEHTRD 13 K9X6D5_9NOST 94.5% 18.7% --DDETAN------------------------ITNIQCRGINRKIKTTAPTDI-------RWVKVQEFLRSNNFALNSRK 14 K9WQD3_9CYAN 95.9% 22.0% --PASGAS-----------------------------------------PIDL-------REVRVEEFLKARSLCANSKT 15 A8ZL79_ACAM1 94.5% 10.4% --ADQAA--------------------------TPIDAARSRTQPATTPLADL-------RWMRVEEFLRSREIRPNTHK 16 Q11AK3_CHESB 94.5% 14.1% --IDQPSAEH--DAPIAEDLPDIIDVVMEMGRATDELSAEAQTPSPVPAVANSRLPTHLDALADRARVYVDAASSANTRR 17 A0A085BQR5_9RHOB 93.9% 14.7% --EDDAREPHGGRGPESLTLPDLV-----AGSGT------------------------LDRLVETARDYAKQAASENTLK 18 E3J1K8_FRASU 95.9% 15.9% --ERDPD----------------------DGELTAWLTGRVT-------------------------DYARAARAASTWK 19 R7CPI2_9FIRM 97.6% 16.9% --QKSKL-------------------------MQEELSAKSL-------------------------NSLAGTKAKNTID 20 E2SEC7_9ACTN 95.2% 18.2% --ADDRDLTR--------------------AGLTPVDAARIG-------------------------EALAAARTDGTRR 21 Q881C8_PSESM 96.9% 15.0% --VNKPLR-----------------------------------------------------------LYLDRL-APSSRL 22 D3VFH9_XENNA 96.6% 17.7% --YDNPAI-----------------------------------------------------------AYLVSLGSKRSRQ 23 K9ZC75_ANACC 96.9% 17.3% --TEHPAS-----------------------------------------------------------VYLSSL-SPGSRP 24 K9VRB2_9CYAN 95.6% 19.2% --TCHPVA-----------------------------------------------------------VYLSLL-APGSQP 25 K9QML7_NOSS7 97.6% 18.0% --TLHPAE-----------------------------------------------------------VYLRSL-GEGSRR 26 K9WS20_9CYAN 96.9% 19.5% --TAHPAA-----------------------------------------------------------VYLSSL-TKGSRR consensus/100% .....................................................................h......to.. consensus/90% ....................................................................hht...s.toh. consensus/80% ....................................................................hhst..s.sopp consensus/70% ...tt...............................................................hhsthhs.so+c cov pid 161 . . . 2 . . . . 240 1 G1D5R6_9CAUD 100.0% 100.0% AYSGSVEGYLNFCVEG-------------------------------ELAPLEK------------ASLLAWVNSM---- 2 K0JV00_SACES 94.9% 26.9% NYLLAVSQLARFLADE-------------------------------AVTDLECVAAAEDPVEVRRGHVELFQVWMI--- 3 Q5NWK4_AROAE 97.6% 20.2% AYGRAVAGFAAWCEQE---------------------------ARITALRDIEPV------------HVAAYVETLQ--- 4 A1VX29_POLNA 97.6% 19.4% AYQGDLRAFMAFTGIV-------------------------------QPEEFRAV---------TRAHILAWRAELEK-- 5 K9W5Y0_9CYAN 95.9% 17.1% EYAKDIKDFFQFVTGN-------------NPRPQ-------QVVEFLELDRFRAM-----------AIVLSYKQNLIE-- 6 K9T4A3_9CYAN 95.6% 18.9% TYAKSLRDFFQTITGDKT----------REPTIN-------LVQEFLSLDRFSAI-----------SLVLKYKGMLVN-- 7 Q8YJY5_NOSS1 96.2% 17.4% AYEKDLRDFFVKMTLL-------------PPTGD-------SVLEFLHLQREQAV-----------MVVLKYKAKLIA-- 8 K9VUP6_9CYAN 95.6% 19.0% AYERDVNDFLVTMTGM-------------PALPD-------NVLEFLHLEERQAV-----------SVVLKYKAKLID-- 9 K9URP8_9CHRO 95.6% 16.6% TYAKAIADFYQRIYNC-------------SVSPQ-------ALGRFLALAQNEAV-----------YQVCYYRSLLIA-- 10 K9UFH0_9CHRO 97.3% 18.3% SYAAALKDFFGRELET-------------EVSVG-------AIELFLQLPEREAI-----------GHVLNYRGQLLT-- 11 A8ZKE4_ACAM1 97.6% 17.2% GYTKDLVDFFLFVTQGESVYEIEGPKRKSEIKAQVKGELSRLSQSFVGIGRLKAL-----------ELAARYRECMMQ-- 12 F4F1H5_VERMA 98.3% 22.3% AYRRDVANWLAWCTDR-------------------------------HLDPLRVNF----------LHVNEYARTLESTL 13 K9X6D5_9NOST 94.5% 18.7% LYERELKRFLGWTELH--------------------------------------------YHELRSRHLAQYKEYLMTEA 14 K9WQD3_9CYAN 95.9% 22.0% AYRRELRRFLAWTERP--------------------------------------------ISQITPRQIVQYKEHLE--- 15 A8ZL79_ACAM1 94.5% 10.4% AYERDLKQLMDWTPKG--------------------------------------------WHEITSRDLDRYKTYLKTEP 16 Q11AK3_CHESB 94.5% 14.1% AYASDWKHFASWSRRQ-------------------------------GVEMFPPDP----------QVVGLYITACASGK 17 A0A085BQR5_9RHOB 93.9% 14.7% AYAKDWAHFTRWCRMK-------------------------------GAEPMPPSP----------EMIGLYLVDLAA-- 18 E3J1K8_FRASU 95.9% 15.9% AYDADLRHFRAWCAAQ--------PG---------------------TPVAVPASA----------LTVAGYLAALAD-- 19 R7CPI2_9FIRM 97.6% 16.9% AYRSDWDDFCDWCKYH-------------------------------KQTSFPATA----------ETIVNYINDLA--- 20 E2SEC7_9ACTN 95.2% 18.2% LYDVVWGQWQRWCAER-------------------------------DVAAVPADP----------LMVCAYLTERAE-- 21 Q881C8_PSESM 96.9% 15.0% TMTYVLQDAADRLGMA-------------------------------DVDIHDIP-----WHTLQPGHVTALVATLRE-- 22 D3VFH9_XENNA 96.6% 17.7% TMKSFLNIVAKMLGYQ-------------------------------NVRDCT-------WGAMRRHHIQAIMEMLSD-- 23 K9ZC75_ANACC 96.9% 17.3% AMGQALNAIAQILTSN-------------------------------QCDALTLD-----WAELRYKHTATLRSILM--- 24 K9VRB2_9CYAN 95.6% 19.2% TMRQSLDAIASLLTEG-------------------------------QCDAMTLN-----WATLRYQHTAAVQGALI--- 25 K9QML7_NOSS7 97.6% 18.0% TMREALNNIAKLLTND-------------------------------TCDASTLD-----WSKLRYQHTAAVRSVLM--- 26 K9WS20_9CYAN 96.9% 19.5% TMGKALNVIARLLTNG-------------------------------QCDALSLD-----WSKLRYQHTAAIRAVLM--- consensus/100% .h...h..h..h........................................................h..h...h.... consensus/90% tht..htthh.hh.......................................................h..hht.h.... consensus/80% shttsltthhthht.t...............................t.t.................hlhthht.L.... consensus/70% sYtpslpphhthhttt...............................tht.h.h............thlhtahshLh... cov pid 241 : . . . . 3 . . 320 1 G1D5R6_9CAUD 100.0% 100.0% -----ASLQPATVHLRLTAVKQFMRWVADE--EGVNVDG---------LLVVRPPKLDQKV--VKHLSDRAVQALVATC- 2 K0JV00_SACES 94.9% 26.9% -----ESRSAATALNKHKGLQQFFKWLWLD-EEEIERSP---------MERVRQPKVTRRL--IPVIRDEDTGRVLATC- 3 Q5NWK4_AROAE 97.6% 20.2% -----TRLSAPSVKQHLAAIRMLFDWLVVG--QVVATNP---------ASAVRGPKHSVKKGKTPVLAADEARALLDAI- 4 A1VX29_POLNA 97.6% 19.4% -----QNLAGASIRRKLAALASLYDYLCES--NAVTHNP---------VRGVKRPKAETSEGKTPALGDAQARALLGAP- 5 K9W5Y0_9CYAN 95.9% 17.1% -----RGLKEATVNRRLAALRSLVNYAFKV--GKCSWT----------LADLKSERIKAYR-DTTGIKPSEFKKMLSLP- 6 K9T4A3_9CYAN 95.6% 18.9% -----KGLSPATINVRLCAIASLVNYARKI--GKCDFT----------LEDVDGLKVQNYR-DTTGIEPESFKTMISLP- 7 Q8YJY5_NOSS1 96.2% 17.4% -----SGVREATINRRLAALKSLAKMGRKL--GVCNYS----------LEDVEGEKVKAYR-DTRGVDSKTIALVLQQF- 8 K9VUP6_9CYAN 95.6% 19.0% -----KGLKEATVNRRLAAVKSLVEMGRKL--GVCHYT----------LGDIKGEKIVGYR-DTTGVDRATFERILSGC- 9 K9URP8_9CHRO 95.6% 16.6% -----AKLAPSTINTRLSALKSLVKYAHQL--GQCSFN----------LSDVTGLKVDGYR-DTTGIAPQGFHDIISLP- 10 K9UFH0_9CHRO 97.3% 18.3% -----AGLAAATVNARLAALRSFVVHAYKR--KLCNFR----------LDDIKSVKAQSYK-DTRGISIDQFQLLIDGI- 11 A8ZKE4_ACAM1 97.6% 17.2% -----RGLQANTINRRLSAVKSMVRMARRL--EMCDWT----------LAEVDGLTVNPYR-DTRGITASQFRLMMVFV- 12 F4F1H5_VERMA 98.3% 22.3% VARTGRPLTPATVARRLSALSSWYDFLVKL--RAVDTNP---------VADADRPRVDRDHSATIGLTPDEVDALLTAAD 13 K9X6D5_9NOST 94.5% 18.7% YIEGDKPLSKSSINAGLAAIKSFFKWFIITYPEIIATNP---------TLGIKLEKVPVPP--AQSLTEKEMQQVWVAL- 14 K9WQD3_9CYAN 95.9% 22.0% -----KSLAESSVNRALSALKSFFGWLLAAYPDSLSTNP---------TSSVALFKLPSPP--AFDLLDSEVEALTRAIG 15 A8ZL79_ACAM1 94.5% 10.4% NHRG-KLRKCATINRSLAALQSFFKWLTVR--DYITKNP---------ALLLEKLKSDPLL--PQEFSQDEVDNLYQAI- 16 Q11AK3_CHESB 94.5% 14.1% ATGDKKPNSVSTIERRLSSLTWNYAQ------RGQPLDR-KDRHIATVMAGIRNKHAAPPR-QKEAILPEDLIAMLETL- 17 A0A085BQR5_9RHOB 93.9% 14.7% PTNGSPALSVSTIDRKLSGLAWNYAQ------RGFTLDR-KNRHIATVLAGIKRKHARPPV-QKEAILPEDILAMVATL- 18 E3J1K8_FRASU 95.9% 15.9% -----AGYKPSTIRRRLAALSVAHQLA------KAPVNPAASVEVATVWDGIRRVHGVRPE-RKAALETTLLTRVLAALD 19 R7CPI2_9FIRM 97.6% 16.9% -----DYAKTATIRRRVSAISENYNAAITS--GIKVENPCREWIVKEALTGLTRLKGGAQT-GKTPIYGDQLCDMIKCI- 20 E2SEC7_9ACTN 95.2% 18.2% -----AGRATGTLDMACTVIRHVHRTT-------GAVDPIASEAVRQVRRGLRRTYGAAPRRLARPLSVEEIRQIVGGI- 21 Q881C8_PSESM 96.9% 15.0% -----DDYAPNTTSLYVNAIRGVMNEAWRH--DLISHDQLLK------IRSIKPVSGTRLA-KGRNIRRTLIRELMEACA 22 D3VFH9_XENNA 96.6% 17.7% -----AGKAPATINTYLSALKGVALEAWTM--KQLDTDNFQH------IKQIRSVRGNRLP-KGRALERYEIKTLFFTCE 23 K9ZC75_ANACC 96.9% 17.3% -----ERYAPATANKMLSALRRVLREALRL--ELMDARDFDR------AVDIANIKVSKEL-QGRCLTEGEINALMQVCF 24 K9VRB2_9CYAN 95.6% 19.2% -----AQHSPATAKKMMCALKRVLKESLRL--DLMSATDYAK------AIDLPKIRTSDKL-RGRALSADEIATLFEVCH 25 K9QML7_NOSS7 97.6% 18.0% -----EKYSPAMANKILCALRRTLKEAWRL--GLMSTDEYGR------ATDIESVRGKSLL-KGRALDVEEISALWDDCR 26 K9WS20_9CYAN 96.9% 19.5% -----EQYAPATANRMLCALRRTLKETRRL--RLMSADDYDA------AVDLKSVRGDSPL-RGRLLKQSEIAALLKVCK consensus/100% ........t.s.h...htslt..h.............p..........h..h..............h....h..hh.... consensus/90% .....t.ht.sohphhhsult..ht.......t.hshs..........h.tlt..ph......h..l..ttht.hh.h.. consensus/80% .....tthtsuThpthLsAlpthhp.hh....thhshs..........h.slct.+st..h..stslt.pphtthhtsh. consensus/70% .....tthtsuTlpptLsAlpphhp.hhh...thhshs..........htslct.+sss.h.tspslp.pphptlhtsh. cov pid 321 . . : . . . . 4 400 1 G1D5R6_9CAUD 100.0% 100.0% -----------AGNTFRDRRDKALIVLFTETGIRAAEMLALDVEDVSLVDC-----------------QLTVRRGKG--A 2 K0JV00_SACES 94.9% 26.9% -----------KGKEFVHLRDEAIIRLYYNTGARLSEVGDLRLEDVDLDRD-----------------TVVYR-GKG--G 3 Q5NWK4_AROAE 97.6% 20.2% -----------DVSTAVGLRDRALIGLMVYTFARIGAALKMRIEDVYVQGRRS---------------WVRLH-EKG--G 4 A1VX29_POLNA 97.6% 19.4% -----------PSDTLKGKRDRAILSVLLYHALRREELTKLLVKDFAQERRGVP--------------HLRVQ-GKG--G 5 K9W5Y0_9CYAN 95.9% 17.1% -----------DLDTNRGRRDYAILRLLWDNALRRGEVSSLNIGDLDLDAR-----------------RLWIL-GKGRGS 6 K9T4A3_9CYAN 95.6% 18.9% -----------DTNTLKGKRDYAILRLLWDNALRRNEIRLANVKDFDPDGG-----------------RLWIQ-GKGK-S 7 Q8YJY5_NOSS1 96.2% 17.4% -----------DRETLIGKRNYAIFLVLWGLALRRQEICQLNVGDFDFYGR-----------------KLRVL-GKGKGT 8 K9VUP6_9CYAN 95.6% 19.0% -----------DLATKAGKRDYALLRLLWGNALRRNEISQLNVRDFDPAGK-----------------TLRIL-GKGRGT 9 K9URP8_9CHRO 95.6% 16.6% -----------DRATVKGSRDYAILRLLWDNALKRGEISNLNVEDFVSLGKASAASESSIQEHLV-G-KLTIV-DNRK-I 10 K9UFH0_9CHRO 97.3% 18.3% -----------DRSTVMGKRDYAMLRLLWDNALRRAEVCGLDRADFHPGEA-----------------RLYLK-GKGR-I 11 A8ZKE4_ACAM1 97.6% 17.2% -----------NRFSLAGARDFAMLTLLWEAGLRRSELVGCDVRHFDSEQK-----------------RLSIL-GKGR-N 12 F4F1H5_VERMA 98.3% 22.3% -----------ADTGPTAARNRAAIALLADLGLRVGELVALDITDLGAERGHR---------------SVRFV-GKG--G 13 K9X6D5_9NOST 94.5% 18.7% -----------EFLGETKQRDIVLIHIL-NHGLRAGEVVNLNVGSFDGK-------------------LLFLPDTKT--N 14 K9WQD3_9CYAN 95.9% 22.0% -----------QLPPDHQRRDAALVAVL-LHGLRAGEVAALNLGDYDGI-------------------RLTIRKGKD--D 15 A8ZL79_ACAM1 94.5% 10.4% -----------CDRGFHSFRDRALLHLI-DHGLRASEIQGLNVGDYDGQ-------------------RVHIREAKA--D 16 Q11AK3_CHESB 94.5% 14.1% -----------DRGTLRGLRDRAMLLLGFAGGLRRSEVVGLDCGRDQTEDGRG------WVEILDKGLLVTLR-GKT--G 17 A0A085BQR5_9RHOB 93.9% 14.7% -----------PF-DLRGLRDRAILLLGYAGGLRRSEIVSLDVGKDDTPDSGG------WIEILEDGALLTLN-AKT--G 18 E3J1K8_FRASU 95.9% 15.9% EPDGTGAEPAGPAAALAAVRDRALLLVGFAGCLRRSELVGLDVADVEVTAD---------------GLVLSVRSSKT--D 19 R7CPI2_9FIRM 97.6% 16.9% -----------DTKGLGGLRDKAVLLLGFMGAFRRSEISGLDVTDIKRVHQ---------------GIIVTVRQSKT--D 20 E2SEC7_9ACTN 95.2% 18.2% -----------NRTTPHGIRDAAIILLGYASAMRRAELVALTLSDVEPKPA---------------GLLLHVRQSKM--D 21 Q881C8_PSESM 96.9% 15.0% -----------ADPRPQGRRDAAIIAILYGSGMRKSESVNLDLAQIDFAER-----------------SLRVM-GKG--N 22 D3VFH9_XENNA 96.6% 17.7% -----------NDVSTKGLRDAAIIGVLLGCGLRRSEIVSLDMKHIIRREQ-----------------ALRVM-GKG--N 23 K9ZC75_ANACC 96.9% 17.3% -----------ADPTPIGYRDAALIAILRGAGLRRGEAVNLNLSDL--HSG-----------------SIKIRNGKG--G 24 K9VRB2_9CYAN 95.6% 19.2% -----------NDSTPAGARDAALLAILR-VGLRRAEVVKLELRDFSARTG-----------------AMKVRGGKG--N 25 K9QML7_NOSS7 97.6% 18.0% -----------EDNSTLGARDAALLAVLT-VGLRRSEITHLDLSDFKPRSR-----------------SLTIREAKG--R 26 K9WS20_9CYAN 96.9% 19.5% -----------NDPSLIGARDAALIAILSGSGIRRSEAVALEVADFDRETG-----------------ALRVLKGKG--R consensus/100% .................t.Rs.shh.lh...hh+htt...h.htp........................h.h..tp.... consensus/90% ..............s.hthRDhAhlhlh...uhRhsEh.thphtch.......................lhl..sKs..t consensus/80% ...........s..s.huhRDhAllhlhh.tulRtuElstLsltcht..tt.................hlplh.uKs..s consensus/70% ...........stss.tGhRDhAlltlhhtsuLR+uElssLsltDhp.ttt.................tlplh.uKs..s cov pid 401 . . . . : . . . 480 1 G1D5R6_9CAUD 100.0% 100.0% KGRR---------VKYSPMCAATIDKYL-RARRRAG----HGSEGPLWIGL--------GGRLSYTGMKS-SLKRRADDA 2 K0JV00_SACES 94.9% 26.9% KERR---------VRFGPRTGRALSRYL-RARDRHV----AAGLPDLWLA------ERGRRALAPNGIKL-MLKRRGRAA 3 Q5NWK4_AROAE 97.6% 20.2% KRHE---------MPCHHNLEEYLHAYI-EGAQLAG-----AGKAFLFRTAIGHTGRLSERPMSQADAYR-MIGRRAADA 4 A1VX29_POLNA 97.6% 19.4% KLRY---------LPAHPHSLRLVAEYL-AASGHGQ-----EADSPLFRRTRAPRAGALASALTPGSVYADVVVRYMAQV 5 K9W5Y0_9CYAN 95.9% 17.1% QKEA---------IALSIPTVNALQEWL-QARRETD------INQPLFISLDK---ASPGHRLSTTSIYK-IVNAIALDA 6 K9T4A3_9CYAN 95.6% 18.9% QKEA---------IDLSPQAIAAIQAWI-AARGKVN------NSQPLFCTLDR---ATNGHRMSGNAIYK-IVRNTAAAA 7 Q8YJY5_NOSS1 96.2% 17.4% NEEY---------LDMSKDVAAALADWL-IARGDLK------PDLPIFTALDF---HNSGHRLTTDAIYK-IVSAAFKKA 8 K9VUP6_9CYAN 95.6% 19.0% QSEV---------VDLGVATVRAIADWL-EERGSCS------PDSPLFIALDS---AHSGHRLSGDGICK-MVVRYSEKA 9 K9URP8_9CHRO 95.6% 16.6% QHSL---------IALAPATTSAIVDWL-ALRGNCQ------PSDPLFVSLDR---RSKGHRLDGSSIYR-LVRKFSESA 10 K9UFH0_9CHRO 97.3% 18.3% DKEP---------IDLAPATVEAISDWL-ASMGESR-------SPALFV-------SSRDTRISVDRLYQ-IVGGLAAAA 11 A8ZKE4_ACAM1 97.6% 17.2% EREW---------IDLTESGVLAISEWL-EKREVYA------LTEPLFISLDR---ANWGSRLSGTSVYR-IVRALAKKA 12 F4F1H5_VERMA 98.3% 22.3% KARR---------RALTPSTAHAVDTYL-AQRAAAEGVQVNELTGPLLV-------TASGARLDRHSVFR-LVRRLARSA 13 K9X6D5_9NOST 94.5% 18.7% EPRL---------VPLRSYSREVIAEYL-QFREEQG--EVLTSLSPLLISHHH---SHKGKRLSYHGIYF-AVEKIGEIA 14 K9WQD3_9CYAN 95.9% 22.0% SGGT---------VPLNRQARECLNAYL-KERRHLG--ERYAKHRPLFLSQSPV--PGKEERLGYQGIYY-TIKGLGQLA 15 A8ZL79_ACAM1 94.5% 10.4% SVGS---------VPLLSKARRAFDQYK-QWREQQG--EVLEDESPLFVSHSN---NSKGQRLQYWGIYK-IFKAIADIA 16 Q11AK3_CHESB 94.5% 14.1% WREV----EIGRGSSNATCPVVALETWL-KFARI--------AHGPLFRRVTGRGKVVGAERLNDQEVAR-LVKRTAMEA 17 A0A085BQR5_9RHOB 93.9% 14.7% WREV----EIGRGSSSQTCPVHALEQWL-HFAKI--------DFGPVFVRTSRDGKKALDARLNDKHVAR-LIKQTVQDA 18 E3J1K8_FRASU 95.9% 15.9% QQAAGALVGVAYGSYRPTCPVRSWQAWT-AAARV--------EDGPAFRGINRHG-QVGAGRLHTSSVAR-IVQRRARAA 19 R7CPI2_9FIRM 97.6% 16.9% QQQMGQQVGIPCISDDDFDCVKAVEQWI-TAANL--------VDGPLFRSILKNN-TASKNRLSSKSINL-IVKKYVSMI 20 E2SEC7_9ACTN 95.2% 18.2% QDGHGEHVAVAHGQHAATDPVAAVNAWR-ELRGE--------TNGALFTRIWGN--TISLEPLSGHVPAR-MLRARAEAA 21 Q881C8_PSESM 96.9% 15.0% KQLI---------KYAPEWAFKALNDWL-ELRRSCLQ-PGQGDDLFLFNRIRRGS-HITRDRITKHAIYF-IAKQRGRQV 22 D3VFH9_XENNA 96.6% 17.7% KERL---------SYMPEGTWDRLTRWVDEVRGD--------HAGPLFTRIRRHD-DVTDNRLSDQAIYH-ILETRRIES 23 K9ZC75_ANACC 96.9% 17.3% RDRT---------VYLPDTAVTVVEDWL-KIRGR--------AAGALLCHVNKAG-AVTLRQLTPQAVLF-ILDKRGIEA 24 K9VRB2_9CYAN 95.6% 19.2% KDRT---------VYLPGDAVKVVEDWL-VVRGR--------EAGALLCPAWKMG-RIHIRPLTPQAVLV-ILQKRAIEA 25 K9QML7_NOSS7 97.6% 18.0% KERI---------VYLPEAGVRAVQDWL-HLRGK--------EPGPLFYPLDKAQ-KIIPRRMSEQGVLR-ALQRRGEHA 26 K9WS20_9CYAN 96.9% 19.5% KFRT---------VYLPPGAIAAVKAWL-EVRGD--------EPGALLGAVRRGG-HVKFKAMTDQAVMV-ILRKRAEQA consensus/100% .......................h.tah....t.............hh............t.ht........h.th.... consensus/90% p.t................shthlttah.t.tt............slhh...........t.hs.tthhh.hltthh..s consensus/80% ptph...........hs.tshtslptal.thtt..........ttsLahth.....t..tptls.pulhh.hlpthuttA consensus/70% ppch.........h.hs.tshpslppaL.thRtp.........tssLFhth.t...thttpRLs.pulhh.hlpphuttA cov pid 481 . 5 . . . . : . 560 1 G1D5R6_9CAUD 100.0% 100.0% GV----------PGFHPHRLRHTSAVRWLK-AGGSEAGLMAQAGWQSRRQ-IDRYIKSAAEELASDEF-DRLNLSVE--- 2 K0JV00_SACES 94.9% 26.9% GV----------AGVHAHRWRHNFAHEWKR-AGGDTGDLMLLLGWESEDM-PRHYGASAAAERAQESQ-TRMGI------ 3 Q5NWK4_AROAE 97.6% 20.2% GI---------LTRIGNHSFRATGITEYLR-NGGKLEIAQQMANHESART-TGLYDRRNDQLTLDEVE--RIVV------ 4 A1VX29_POLNA 97.6% 19.4% GIAG--------ENMGPHALRATAATNALE-HQADIAKVQEWLGHASIST-TRVYDRRGSRPEDSPTF--KVAY------ 5 K9W5Y0_9CYAN 95.9% 17.1% GI---------TKKLSPHRIRHSSVTAALEATGGDVRRVQKLSRHSNLNT-LMIYDDNRLSHQGEITD--ILADLV---- 6 K9T4A3_9CYAN 95.6% 18.9% GI---------KKIISPHRIRHSAITAALDATGGDTRKVQKLSRHADLNT-LTRYDDNRLRHQKEVTT--ILADLI---- 7 Q8YJY5_NOSS1 96.2% 17.4% GV---------KKPMSPHRVRHSAITAALDATDGNIRKVQKLSRHADPRT-LMIYDDNRNKDLWEMSE--LLTLMLKNSE 8 K9VUP6_9CYAN 95.6% 19.0% GI---------KKQMSPHRIRHSAITAALDATDGDVRKVQKLSRHRNLNT-LMVYDDNRSRDQGAVTD--LLDGMF---- 9 K9URP8_9CHRO 95.6% 16.6% GI---------DTVVSPHQIRHSAITAYLDASEGNVRGAQGLSRLTNPNI-LSRYEDNRQQYQEQASH--ILADLV---- 10 K9UFH0_9CHRO 97.3% 18.3% GITSGRQA--NERVVSPHKIRHSSITALLDLNGGDVRSAQAHSRHKNLST-LIRYDDGRQQLQGKAAK--TLADAISERE 11 A8ZKE4_ACAM1 97.6% 17.2% GV---------SENFGPHKIRHSGTTTYLEMTGGDLRGAQAYSRHANLNT-LKFYDDNRKQLQKKASA--KLAETISWKK 12 F4F1H5_VERMA 98.3% 22.3% QIPA-------WAHLSPHSLRHAFATTARA-EGVPLEDVQDAMGHADPRT-TRRYDRDRHNLDRDPAY--VIWAARARRR 13 K9X6D5_9NOST 94.5% 18.7% GI----------DNLHPHAFRHTYATDLLL-LGVDPSHARKLTGHQSEKA-FRRYTLRSEQEAAISAYYRAIGEEV---- 14 K9WQD3_9CYAN 95.9% 22.0% GI----------ENLTPHRLRHTYATNLLL-KGIDSLHARTLTRHKSEAN-FKRYAKRALSAAAERAFYEAIGEEP---- 15 A8ZL79_ACAM1 94.5% 10.4% EV----------ENAHPHRGRHTLATRLVM-KDMDSILARKVTRHKSEQS-FVRYSDRGIELKAEQQFYEVHGEAPGGED 16 Q11AK3_CHESB 94.5% 14.1% GVRGDLSEKDRVKLFAGHSLRAGLASS----AEVDERYVQKQLGHSSAEM-TRKYQRRRDRFRVNLTK--ASGL------ 17 A0A085BQR5_9RHOB 93.9% 14.7% GIRSELPEKERLALFSGHSLRAGLASS----ADVDERYVQKQLGHASAEM-TRRYQRRRDRFRVNLTK--AAGL------ 18 E3J1K8_FRASU 95.9% 15.9% GLDP--------ADFAGHSLRSGFATAAAR-AGASDRAIMRQGRWRSASS-LDSYVRAGRLFDRDNPS-SQVGL------ 19 R7CPI2_9FIRM 97.6% 16.9% GLNP--------DLYGAHSLRHGFATYAAL-NGVEERLIMRQTRHRSVEM-VRRYINEADLFVNNPIS--AIFNKK---- 20 E2SEC7_9ACTN 95.2% 18.2% GLDG--------TRITAHSLRAGHATTAAL-AGVPLNRIAAQTRHKDLGVLVNRYIRPLEALATTSSK--DLGL------ 21 Q881C8_PSESM 96.9% 15.0% GV-----------DIMPHDFRRSFITRVIE--EFDLSIAQKLAHHTHIST-TASYDMRSENERRNVVD--GFDL------ 22 D3VFH9_XENNA 96.6% 17.7% GV----------EKFAPHDLRRTFASAMLD-NGEDIVTVKDAMGHSSITT-TQKYDRRGDERLRNAAR--NLDF------ 23 K9ZC75_ANACC 96.9% 17.3% GV----------ENFSAHDFRRTFISDLLD-SGVDIVTVQRLAGHASPEL-TSRYDRRGEETKRQAVQ--FISVPKRK-- 24 K9VRB2_9CYAN 95.6% 19.2% GV----------ESFSPHDFRRTFCSDLLD-AGVDIVTVAELAGHSSPAI-VAKYDRRGEERKRLAVE--LLSIRNKR-- 25 K9QML7_NOSS7 97.6% 18.0% GV----------ENFTPHDFRRTFIGNLLD-AGADIVTVAKLAGHASPST-TSKYDRRGEAAKKRAID--LIDVPYNGRD 26 K9WS20_9CYAN 96.9% 19.5% GV----------AAFSPHDFRRTFISNLLE-AGADVLTVSRLAGHSNPAT-SLKYDLRGENAKRRAVQ--LLHVPYED-- consensus/100% tl............h.sHthRts.h.......t.....h....thtp.t.....Y......................... consensus/90% Gl..........t.htsHphRts.hsthh..tths...h.t..tats.t..h.hY..tt.t...t......h........ consensus/80% Gl..........t.hssHphRpshhothh..tsss.hhstt..tHts.ph.h.hYtcpttp.ttp.s...hls....... consensus/70% Gl..........pthssHphR+ohhoshlt.sss-.ttspphstHts.ph.htpYscptpphptp.sp..hls....... cov pid 561 . . . 6 . . . . 640 1 G1D5R6_9CAUD 100.0% 100.0% -------------------------------------------------------------------------------- 2 K0JV00_SACES 94.9% 26.9% -------------------------------------------------------------------------------- 3 Q5NWK4_AROAE 97.6% 20.2% -------------------------------------------------------------------------------- 4 A1VX29_POLNA 97.6% 19.4% -------------------------------------------------------------------------------- 5 K9W5Y0_9CYAN 95.9% 17.1% -------------------------------------------------------------------------------- 6 K9T4A3_9CYAN 95.6% 18.9% -------------------------------------------------------------------------------- 7 Q8YJY5_NOSS1 96.2% 17.4% -------------------------------------------------------------------------------- 8 K9VUP6_9CYAN 95.6% 19.0% -------------------------------------------------------------------------------- 9 K9URP8_9CHRO 95.6% 16.6% -------------------------------------------------------------------------------- 10 K9UFH0_9CHRO 97.3% 18.3% M------------------------------------------------------------------------------- 11 A8ZKE4_ACAM1 97.6% 17.2% NT------------------------------------------------------------------------------ 12 F4F1H5_VERMA 98.3% 22.3% G------------------------------------------------------------------------------- 13 K9X6D5_9NOST 94.5% 18.7% -------------------------------------------------------------------------------- 14 K9WQD3_9CYAN 95.9% 22.0% -------------------------------------------------------------------PTP---------- 15 A8ZL79_ACAM1 94.5% 10.4% GIVEDQLEGIELKAVVEEPANWPKIKAVGLPLNTVQVRLTLEVSGKKKGKVRKEIEERVFSPFQMVKPKPRGNEYELMVV 16 Q11AK3_CHESB 94.5% 14.1% -------------------------------------------------------------------------------- 17 A0A085BQR5_9RHOB 93.9% 14.7% -------------------------------------------------------------------------------- 18 E3J1K8_FRASU 95.9% 15.9% -------------------------------------------------------------------------------- 19 R7CPI2_9FIRM 97.6% 16.9% -------------------------------------------------------------------------------- 20 E2SEC7_9ACTN 95.2% 18.2% -------------------------------------------------------------------------------- 21 Q881C8_PSESM 96.9% 15.0% -------------------------------------------------------------------------------- 22 D3VFH9_XENNA 96.6% 17.7% -------------------------------------------------------------------------------- 23 K9ZC75_ANACC 96.9% 17.3% -------------------------------------------------------------------------------- 24 K9VRB2_9CYAN 95.6% 19.2% -------------------------------------------------------------------------------- 25 K9QML7_NOSS7 97.6% 18.0% K------------------------------------------------------------------------------- 26 K9WS20_9CYAN 96.9% 19.5% -------------------------------------------------------------------------------- consensus/100% ................................................................................ consensus/90% ................................................................................ consensus/80% ................................................................................ consensus/70% ................................................................................ cov pid 641 : . . . . 7 . . 720 1 G1D5R6_9CAUD 100.0% 100.0% -------------------------------------------------------------------------------- 2 K0JV00_SACES 94.9% 26.9% -------------------------------------------------------------------------------- 3 Q5NWK4_AROAE 97.6% 20.2% -------------------------------------------------------------------------------- 4 A1VX29_POLNA 97.6% 19.4% -------------------------------------------------------------------------------- 5 K9W5Y0_9CYAN 95.9% 17.1% -------------------------------------------------------------------------------- 6 K9T4A3_9CYAN 95.6% 18.9% -------------------------------------------------------------------------------- 7 Q8YJY5_NOSS1 96.2% 17.4% -------------------------------------------------------------------------------- 8 K9VUP6_9CYAN 95.6% 19.0% -------------------------------------------------------------------------------- 9 K9URP8_9CHRO 95.6% 16.6% -------------------------------------------------------------------------------- 10 K9UFH0_9CHRO 97.3% 18.3% -------------------------------------------------------------------------------- 11 A8ZKE4_ACAM1 97.6% 17.2% -------------------------------------------------------------------------------- 12 F4F1H5_VERMA 98.3% 22.3% -------------------------------------------------------------------------------- 13 K9X6D5_9NOST 94.5% 18.7% -------------------------------------------------------------------------------- 14 K9WQD3_9CYAN 95.9% 22.0% -------------------------------------------------------------------------------- 15 A8ZL79_ACAM1 94.5% 10.4% VEGGDTLSAITDQMKWDMELLGELDDCEVKVAWLDQQESTGEVTLESQEDESAFAESSAGQRPTSTSSVYQMKIMLLGVR 16 Q11AK3_CHESB 94.5% 14.1% -------------------------------------------------------------------------------- 17 A0A085BQR5_9RHOB 93.9% 14.7% -------------------------------------------------------------------------------- 18 E3J1K8_FRASU 95.9% 15.9% -------------------------------------------------------------------------------- 19 R7CPI2_9FIRM 97.6% 16.9% -------------------------------------------------------------------------------- 20 E2SEC7_9ACTN 95.2% 18.2% -------------------------------------------------------------------------------- 21 Q881C8_PSESM 96.9% 15.0% -------------------------------------------------------------------------------- 22 D3VFH9_XENNA 96.6% 17.7% -------------------------------------------------------------------------------- 23 K9ZC75_ANACC 96.9% 17.3% -------------------------------------------------------------------------------- 24 K9VRB2_9CYAN 95.6% 19.2% -------------------------------------------------------------------------------- 25 K9QML7_NOSS7 97.6% 18.0% -------------------------------------------------------------------------------- 26 K9WS20_9CYAN 96.9% 19.5% -------------------------------------------------------------------------------- consensus/100% ................................................................................ consensus/90% ................................................................................ consensus/80% ................................................................................ consensus/70% ................................................................................ cov pid 721 . . : . . . . 8 800 1 G1D5R6_9CAUD 100.0% 100.0% -------------------------------------------------------------------------------- 2 K0JV00_SACES 94.9% 26.9% -------------------------------------------------------------------------------- 3 Q5NWK4_AROAE 97.6% 20.2% -------------------------------------------------------------------------------- 4 A1VX29_POLNA 97.6% 19.4% -------------------------------------------------------------------------------- 5 K9W5Y0_9CYAN 95.9% 17.1% -------------------------------------------------------------------------------- 6 K9T4A3_9CYAN 95.6% 18.9% -------------------------------------------------------------------------------- 7 Q8YJY5_NOSS1 96.2% 17.4% -------------------------------------------------------------------------------- 8 K9VUP6_9CYAN 95.6% 19.0% -------------------------------------------------------------------------------- 9 K9URP8_9CHRO 95.6% 16.6% -------------------------------------------------------------------------------- 10 K9UFH0_9CHRO 97.3% 18.3% -------------------------------------------------------------------------------- 11 A8ZKE4_ACAM1 97.6% 17.2% -------------------------------------------------------------------------------- 12 F4F1H5_VERMA 98.3% 22.3% -------------------------------------------------------------------------------- 13 K9X6D5_9NOST 94.5% 18.7% -------------------------------------------------------------------------------- 14 K9WQD3_9CYAN 95.9% 22.0% -------------------------------------------------------------------------------- 15 A8ZL79_ACAM1 94.5% 10.4% PQVWRRIQVPETTTLAQLHSVLQVVMGWEGYHLHQFSDSEDEAMTLAELIEDDLFSFGYLYDFGDMWRHEIKVEKRLESK 16 Q11AK3_CHESB 94.5% 14.1% -------------------------------------------------------------------------------- 17 A0A085BQR5_9RHOB 93.9% 14.7% -------------------------------------------------------------------------------- 18 E3J1K8_FRASU 95.9% 15.9% -------------------------------------------------------------------------------- 19 R7CPI2_9FIRM 97.6% 16.9% -------------------------------------------------------------------------------- 20 E2SEC7_9ACTN 95.2% 18.2% -------------------------------------------------------------------------------- 21 Q881C8_PSESM 96.9% 15.0% -------------------------------------------------------------------------------- 22 D3VFH9_XENNA 96.6% 17.7% -------------------------------------------------------------------------------- 23 K9ZC75_ANACC 96.9% 17.3% -------------------------------------------------------------------------------- 24 K9VRB2_9CYAN 95.6% 19.2% -------------------------------------------------------------------------------- 25 K9QML7_NOSS7 97.6% 18.0% ----RR-------------------------------------------------------------------------- 26 K9WS20_9CYAN 96.9% 19.5% -------------------------------------------------------------------------------- consensus/100% ................................................................................ consensus/90% ................................................................................ consensus/80% ................................................................................ consensus/70% ................................................................................ cov pid 801 . . . . : . . ] 878 1 G1D5R6_9CAUD 100.0% 100.0% ------------------------------------------------------------------------------ 2 K0JV00_SACES 94.9% 26.9% ------------------------------------------------G----------ENV---------------- 3 Q5NWK4_AROAE 97.6% 20.2% ------------------------------------------------------------------------------ 4 A1VX29_POLNA 97.6% 19.4% ------------------------------------------------------------------------------ 5 K9W5Y0_9CYAN 95.9% 17.1% ------------------------------------------------------------------------------ 6 K9T4A3_9CYAN 95.6% 18.9% ------------------------------------------------------------------------------ 7 Q8YJY5_NOSS1 96.2% 17.4% ------------------------------------------------------------------------------ 8 K9VUP6_9CYAN 95.6% 19.0% ------------------------------------------------------------------------------ 9 K9URP8_9CHRO 95.6% 16.6% ------------------------------------------------------------------------------ 10 K9UFH0_9CHRO 97.3% 18.3% ---------------------------------------------------------D-------------------- 11 A8ZKE4_ACAM1 97.6% 17.2% ---------------------------------------------------------D-ESANE-------------- 12 F4F1H5_VERMA 98.3% 22.3% ------------------------------------------------------------------------------ 13 K9X6D5_9NOST 94.5% 18.7% ------------------------------------------------------------------------------ 14 K9WQD3_9CYAN 95.9% 22.0% ------------------------------------------------------------------------------ 15 A8ZL79_ACAM1 94.5% 10.4% PGKNYPICLAGKRACPPEDCGGDWGYARLLRVLNNPRHPEHEERLEWVGSDFDPKAFDLEEVNQALKELEVETMSYFD 16 Q11AK3_CHESB 94.5% 14.1% ------------------------------------------------------------------------------ 17 A0A085BQR5_9RHOB 93.9% 14.7% ------------------------------------------------------------------------------ 18 E3J1K8_FRASU 95.9% 15.9% ------------------------------------------------------------------------------ 19 R7CPI2_9FIRM 97.6% 16.9% ------------------------------------------------------------------------------ 20 E2SEC7_9ACTN 95.2% 18.2% ------------------------------------------------------------------------------ 21 Q881C8_PSESM 96.9% 15.0% ------------------------------------------------------------------------------ 22 D3VFH9_XENNA 96.6% 17.7% ------------------------------------------------------------------------------ 23 K9ZC75_ANACC 96.9% 17.3% ------------------------------------------------------------------------------ 24 K9VRB2_9CYAN 95.6% 19.2% ------------------------------------------------------------------------------ 25 K9QML7_NOSS7 97.6% 18.0% ------------------------------------------------------------------------------ 26 K9WS20_9CYAN 96.9% 19.5% ------------------------------------------------------------------------------ consensus/100% .............................................................................. consensus/90% .............................................................................. consensus/80% .............................................................................. consensus/70% ..............................................................................