cov pid 1 [ . . . . : . . . 80 1 B7KLQ4_CYAP7/136-277 100.0% 100.0% KRVYLDE-AGFDNRD-DYPYGYSPKGER--CYDLKCGKKRE----RVSWIGALKEGK---ILAP-LTFEGCCNRDLFEA- 2 Q112T8_TRIEI/59-200 100.0% 57.0% SIVYVDE-AGIDNRE-DYSYDYGVKGKR--LPGMKLGKRTE----RVSWIAAINQEK---MFAS-LTFIRSCNRDLFEN- 3 Q3J777_NITOC/19-161 100.0% 39.9% RFVYLDE-SGFEPEV-SRRYAYAPKGRR--VYGLISGHRRP----RTSLLAARMDEG---FEAP-FLFEGTCNTAVFNA- 4 B8M612_TALSN/206-353 100.0% 29.1% DLIFLDE-SIFNEKTGWRRHAYAPIGDD--AEIDADINWGK----TWSICAAMTLEG---YLPCTGIKDGYYSTGDFAD- 5 Q3SVR1_NITWN/44-186 100.0% 32.9% RLVFIDE-TWTKTNM-APLRGWAPRGQR--IRAKVPHGRWQ----TMTFMAALRHDR---ITAP-WFIEGPINGEAFLL- 6 C1DG58_AZOVD/44-186 100.0% 34.3% KLIFVDE-TAASTNL-ARLRGWAPRGER--CRAAIPHGHWK----TTTFTAGLRVDG---LTAP-LVLDGAMNGPVFLA- 7 C3KMH7_SINFN/48-190 100.0% 33.6% RLVFIDE-TSTNTKL-TKRSGWAPKGQR--YRAHAPFGSWK----TQTFIAGLRSHG---VVAP-FIVNAPMNRRIFET- 8 Q5P8V6_AROAE/74-216 100.0% 37.1% RLRFIDE-SGVNIAM-TRHYGRALRGER--VPDAVPKNHGR----NVTLLGAVSCRG---IDAV-MTVEGPTDAAVFRA- 9 B1WNX3_CYAA5/19-161 100.0% 38.5% NLVFIDE-SGVNLAM-LRLYARSLKGTR--ARGEKPQKRGH----NISIIGALSLEK---ILAF-ANIYGSVNGVTFEA- 10 B8HLS5_CYAP4/14-156 100.0% 34.3% NLVFLDE-MGVLQGM-SRPRGRSRKGQR--VYDLKPFYRGR----RVTVVGAISQTS---ILAM-QTLGKSMTGEDFKQ- 11 A5CDW1_ORITB/138-276 95.8% 39.6% -LVFIDE-SGIEDNA-CREYGWSIKGTR--CYVNKAYQHKS----RVSMIAGLCNNQ---IIAP-VIFEGNCNKEIFTT- 12 B3MG73_DROAN/322-472 97.2% 13.5% RVVFHDE-RRFNLDG-PDGFSYYFHDLRNYERTLSQRPRGN----SVYIYLMVCVGG--------AVHLEVSSAKQRPES 13 B8LZ95_TALSN/146-306 100.0% 16.8% SMLFSDF-VNFGLGTTRKAKVFNRKDERLCEDCLQSREEIDKALFHCWAMVGYDYKG---PLIFLETEDNDLSAMSQRD- 14 B2J3A3_NOSP7/183-342 99.3% 26.7% QVWFWDE-SGFSLRV-IRRKNWGKKGKR--KN-VLLLRRCG----RVNVMGAIRESD---RKRV-CFFVKKGNADIFYE- 15 B8FA67_DESAA/174-314 95.1% 25.0% DIWFADE-SGFDGDP-RPRRRWDKKGRK-----TRSTKNGDH--IRMNVIGMVCPRT---GEFF-AIEATNVFTEMFQV- 16 Q2SM05_HAHCH/47-193 99.3% 26.4% DLYYFDE-SGFSQRS-NLPYGWSPVGQS--TR-LKSYSHSK----RLNVLGFMNRRQ---KLIF-HTTEERVDSAQVVA- 17 A8ZPF4_ACAM1/39-182 97.2% 23.6% DLRYLDE-SGFCLVP-YVPYAWQEKGET-L---GLPSQRSS----RFNVLGLMNRHN---DLTS-YVFDKSITSAVVVA- 18 B0JUR0_MICAN/39-182 97.2% 23.6% EIGYLDE-MGGDSKP-CIPEAWQEEKTT-I---KLPPIEGK----RLNILGIMKRDN---QLFY-ETQVGTVTSEIVIN- 19 Q12BS7_POLSJ/169-312 98.6% 22.6% QIYWGDE-MGLRSDH-VSGKSYAPAGQT--PL-IRATGQRF----GCNMISAITNKG---ALAF-MVFEGKFRAPLFVE- 20 A0R819_PELPD/171-314 98.6% 21.9% EIYWGDE-TGIQTGA-NVERGYSPKGKT--PV-LRQTGRKH----RINMISAITNQG---KVRF-MFYKETMNSKRLIT- 21 B8F0C4_THASP/172-315 98.6% 22.6% VIYWADE-TAVKEDT-NWIRGFAPAGRT--PV-LEASARWA----KLSMISAITNRG---EIAF-QIVEGTINAERFIE- 22 A1TXP2_MARHV/168-311 98.6% 26.7% TIYFGDE-ASIRSDY-HSGTTWAPKGET--PI-IRNTGSRF----SINLISAISPRG---ELRF-KTIQGTMNTDAFLG- 23 Q5P1T1_AROAE/182-325 98.6% 23.3% EILFWDE-SGFRADA-VQGRTWGAKGRT--PV-VAVPGQRQ----SISAASAVSMKG---GFWF-AIYPGALNGELFVD- 24 A6LRL5_CLOB8/180-328 99.3% 23.3% VLYSLDE-TGLRTES-DIRRSWSQIGVS--PI-LESNNSHE----GINIIGATEISKNFDTIMDAYPAKHSIKSHEVEV- 25 Q10V63_TRIEI/166-315 97.9% 16.3% TVFMIDE-CHLLWGD-ILGYAWGKTDERIE---IAIKNEKE----RQTYYGALDYKT---KEFL-VQEYESGNTKNTIE- 26 D3VKI2_XENNA/117-263 99.3% 22.3% PLLFRDA-VPPSPST-KLSAGGMKAGKNQVKV-AETTGSRT----RLNLMGALNLQQ---IEETVIREYPTINAKNVVL- 27 Q6LH76_PHOPR/165-309 99.3% 21.9% PLLFMDA-VHPTQAT-KITAGWVKKGVD--KP-IETTGSRT----RLNIVGAIRLGH---LSEAIVDKYKTVNGESIIA- 28 Q9K9X4_BACHD/19-163 99.3% 24.0% HLLFQDE-SMIRDYQ-ALQYTWFLKGKQ--RI-IPTYGKHQ----GVKLIGTLNYET---GDVL-CVEEERYDAEAFLR- 29 Q8ZSE8_NOSS1/20-198 100.0% 13.4% RTISIDEMTGIQATERLEKDLPMRPGKV--ERREFEYIRHG----TQSLIASFDVAT---GQIVEPTCSDTRTEIDFAL- 30 Q01P88_SOLUE/181-333 100.0% 12.4% PVVCLDE-KPVTLHADVRPTSPAKPGRE--ARRDNEYERRG----TANVFCAVEPKA---GRHF-TFATPDRSAFEFAH- 31 A1VRC2_POLNA/30-181 100.0% 13.2% PVVCMDE-TPRQLIRETREPIAAAPGRP--ERHDYEYERCG----VCNVFMASEPLA---GRRL-TKVTERRTKTDWAV- 32 A1WPJ8_VEREI/180-332 100.0% 13.1% PVVCFDE-SPTQLIGEVRQPIPAEPGQP--LRYDYEYKRNG----TANLFVFLDAHR---SWRR-VKVTERRMAQDFAQ- 33 A7ILC4_XANP2/116-266 99.3% 17.1% VLLYGDE-SEALTHP-YLARAWAKSGAD--LR-VPAPGQAK----NVAMLGSLNHAT---RELI-VQTSPTKRSSDFVA- 34 D2QCC4_SPILD/162-305 99.3% 22.8% VILYIDE-SACYLLP-FVAHTWAPCGQT--PV-LMEQAGRT----HLSLIAAIAANG---QIYV-AGQNQAFTSEDIVW- 35 D3T269_NATMM/179-319 98.6% 18.2% TVVCIDQ-TKKSVQV-EPRAAWFPRGTR--PS-VELSGQRD----WTCLLGAITENG---DRFF-TRFEEYVTAAHAKH- 36 Q5V1W0_HALMA/25-182 98.6% 18.8% TVVVVDQ-FTKHVGT-VQRRGFYPIGSN--PT-IEVATSWD----SVTVLGAVTDNG---DSFF-CWTEENLTRNHGIR- consensus/100% .hh..D...................t......................hh......t................t...... consensus/90% .hhhhDp...h..........h...stp..........pht....thshhshhp.tt............t.hpt..h... consensus/80% .lhhhDE.sthp.t.....hsht.hGpp.....h...tptt....phshhuuhp.pt.....h..hhh.tthsst.h.t. consensus/70% plhahDE.sshp.t..hhthsas.tGpp.....h..htptp....phshhuulp.ps...h.hh.hhhttshsst.hht. cov pid 81 . 1 . . . . : . 160 1 B7KLQ4_CYAP7/136-277 100.0% 100.0% WLSQSLVPQLEP----------------GDIIILDNAT--FHKGETIREIVEE--------------------------- 2 Q112T8_TRIEI/59-200 100.0% 57.0% WLEHCLLPKLHP----------------GQVIIVDNAT--FHKSVDIEELVAK--------------------------- 3 Q3J777_NITOC/19-161 100.0% 39.9% WLEKELCPLLNS----------------NHIVIMDNAP--FHKAVSSREIIKK--------------------------- 4 B8M612_TALSN/206-353 100.0% 29.1% WLETKLIPALSQIH------------QFPMVIVLDNVK--IHTREHVSQIIES--------------------------- 5 Q3SVR1_NITWN/44-186 100.0% 32.9% YIEKVLVPTLRH----------------GDIVIMDNLG--SHKASAVRRVIRA--------------------------- 6 C1DG58_AZOVD/44-186 100.0% 34.3% YVGQVLVPELTP----------------GDIVVMDNLP--AHKVAGVRQAIEG--------------------------- 7 C3KMH7_SINFN/48-190 100.0% 33.6% WIETQLAPTLSP----------------GDVVILDNVG--FHKSERAEQMVKA--------------------------- 8 Q5P8V6_AROAE/74-216 100.0% 37.1% YVDQVLVPALAP----------------GDIVVMDNLS--AHKVKGIRETIEG--------------------------- 9 B1WNX3_CYAA5/19-161 100.0% 38.5% FIVTELVPKLWT----------------GACVVMDNAK--IHLGEIVREAIEE--------------------------- 10 B8HLS5_CYAP4/14-156 100.0% 34.3% FVSEHLVPKLWS----------------GAVVVMDNLK--AHQVEGIEQMIEA--------------------------- 11 A5CDW1_ORITB/138-276 95.8% 39.6% YVETILIKELRP----------------GQIVIMDNIN--FHKNNTIKVLIES--------------------------- 12 B3MG73_DROAN/322-472 97.2% 13.5% CIEAIMRERPNIVGK-----------LGSPEFVLQDHNWMSHALPTAQDLLNA--------------------------- 13 B8LZ95_TALSN/146-306 100.0% 16.8% YISQIIQLHVQPIV------------TARRMIYLDNASEVYEHATAPQNMVHAY-------------------------- 14 B2J3A3_NOSP7/183-342 99.3% 26.7% QLQQLNELIKQEWASIGNLGKDFSKHGPKIILILDNAS--FHKRKDIIAKISEE-------------------------- 15 B8FA67_DESAA/174-314 95.1% 25.0% FLDEAKKCIEFER--------------ERNILILDNAT--WHKCKTLNWH------------------------------ 16 Q2SM05_HAHCH/47-193 99.3% 26.4% LFNKLAESKDPLK---------------NAVVLLDNAS--VHRSAEFRRHRWDWM------------------------- 17 A8ZPF4_ACAM1/39-182 97.2% 23.6% CIDDFSRTCDQ-----------------HTVVVMDQAS--VHKNAEIEEKIEDW-------------------------- 18 B0JUR0_MICAN/39-182 97.2% 23.6% FLDKYCQNIQK-----------------KTVIIIDQAS--IHTSEAFMEKLEEW-------------------------- 19 Q12BS7_POLSJ/169-312 98.6% 22.6% FLRRLLKQVEG-----------------KICLIVDGHP--VHKSGVVKRFVQAN-------------------------- 20 A0R819_PELPD/171-314 98.6% 21.9% FMKRLVKDAGR-----------------KVYLILDNLK--VHHSHVVMDWLEKH-------------------------- 21 B8F0C4_THASP/172-315 98.6% 22.6% FLERLIASAAS-----------------KVFLIVDNLR--VHHAKLVQAWVETR-------------------------- 22 A1TXP2_MARHV/168-311 98.6% 26.7% FLKALVQDADK-----------------PVFLILDNHP--VHHARRVREYVESL-------------------------- 23 Q5P1T1_AROAE/182-325 98.6% 23.3% LLRKLMHRRRK-----------------PLHLVLDGLP--AHKKAGVKTYVAST-------------------------- 24 A6LRL5_CLOB8/180-328 99.3% 23.3% FLERLLKIHVGK----------------KVYVLLDNAK--FHTSRIIQDFADAH-------------------------- 25 Q10V63_TRIEI/166-315 97.9% 16.3% FIKYLQKQRPGN----------------KLAIFWDGAT--YHNSQEFREYLMTIN------------------------- 26 D3VKI2_XENNA/117-263 99.3% 22.3% FFGAIRETYPLSQ---------------KIHLILDGAG--YHRSEIVKFFAEV--------------------------- 27 Q6LH76_PHOPR/165-309 99.3% 21.9% FLNRTRDFYRASG---------------TIHLVLDGAG--YHRSFQVVEEAKK--------------------------- 28 Q9K9X4_BACHD/19-163 99.3% 24.0% FLQKVLKHYPTG----------------KIVMVLDNAR--IHHAKLIEPFLRNH-------------------------- 29 Q8ZSE8_NOSS1/20-198 100.0% 13.4% HIRRTIETDTQAK---------------KWHLIMDCLN--THQSESLVRLVAEKEGLNLDLGIKGESGILKSMKSRTTFL 30 Q01P88_SOLUE/181-333 100.0% 12.4% VVFELAMQYQQAD---------------TIHLVLDNLN--IHCLKSLTDAFGMEMG------------------------ 31 A1VRC2_POLNA/30-181 100.0% 13.2% FVQDIAASYPDAE---------------RITLVMDNLN--THTPGSLYEAFSPEQA------------------------ 32 A1WPJ8_VEREI/180-332 100.0% 13.1% CMRDLVDIHYPQA--------------ERIRLVLDNLS--THTAAALYQSMPPQEA------------------------ 33 A7ILC4_XANP2/116-266 99.3% 17.1% HLQQLDEAYGPKPGR----------AARPVVLVEDNGP--IHTSKLSRAALAAR-------------------------- 34 D2QCC4_SPILD/162-305 99.3% 22.8% FLKLLCGRYRKR----------------NLLIIWDGAA--IHRSNVVKELLRER-------------------------- 35 D3T269_NATMM/179-319 98.6% 18.2% FILALCQEFED-----------------NLIVVLDGAP--YFQASAVTDLAAR--------------------------- 36 Q5V1W0_HALMA/25-182 98.6% 18.8% LLEALKDRFGE-----------------ELVVFLDRAG--YFYARDLWEHVSGERETETVG--------------DSSVS consensus/100% .h.............................hh.pth........................................... consensus/90% hhtt..........................hllhDsh...hHp...h..hh............................. consensus/80% hlpphh..h.t.................t.hllhDshs..hHpst.h.phhtt........................... consensus/70% alpphht.h.t.................thhllhDshs..hHpsttlpphlpt........................... cov pid 161 . . . 2 . ] 212 1 B7KLQ4_CYAP7/136-277 100.0% 100.0% ----AGCELWYL-----PAYSPDLNKIENWWSVLKTWMKQ---MLPEFETVR 2 Q112T8_TRIEI/59-200 100.0% 57.0% ----VKCEIWYL-----PPYSPDFNKIERWWFVLKNWIRP---RLKEFKNFR 3 Q3J777_NITOC/19-161 100.0% 39.9% ----TGAGILFL-----PPYSPDFNPIEKDFGNIKKIREY--NEHETLENIV 4 B8M612_TALSN/206-353 100.0% 29.1% ----AGHLIRYL-----PPYSPNYNPIELTFSVLKSWMKR---NWIFLRETC 5 Q3SVR1_NITWN/44-186 100.0% 32.9% ----AGARLFYL-----PKYSPDLNPIEQFFAKFKHWLRK--AAQRTTEAVY 6 C1DG58_AZOVD/44-186 100.0% 34.3% ----AGATLRYL-----PPYSPDLNPIEMAFSKLKALLRK--AAARTVPELW 7 C3KMH7_SINFN/48-190 100.0% 33.6% ----KGAWLLFL-----PPYSPDLNPIEMAFSKLKALLRK--RAARSFDAIA 8 Q5P8V6_AROAE/74-216 100.0% 37.1% ----AQADLLYL-----PPYSPDWSPIEPCWSKLKTALRA--AKARTREALD 9 B1WNX3_CYAA5/19-161 100.0% 38.5% ----AGASLMYL-----PPYSPEFSPIENFWSKVKAILRK--IKARNYKDLI 10 B8HLS5_CYAP4/14-156 100.0% 34.3% ----VGARVVYL-----SPYSPEFNPIEHLWWQLKALIRR--FVPKSVEAIT 11 A5CDW1_ORITB/138-276 95.8% 39.6% ----VGCSILFL-----PTYSPDLNPIEHYWFKIKNEIRKVTAQFKD----- 12 B3MG73_DROAN/322-472 97.2% 13.5% ----EGLKTQKW-----PTIAHDLNIMENVWGWLIREVFDGGRKFSRKDDLI 13 B8LZ95_TALSN/146-306 100.0% 16.8% ---LDSLHLPYIQ---NPPTSPDLNVLKDVLLLLKKRLQK--RSIGDQIQLK 14 B2J3A3_NOSP7/183-342 99.3% 26.7% ---FPNFVLEFL-----PAYSPDYNIIELVWHSCKEYIAH--RLFKSVDELQ 15 B8FA67_DESAA/174-314 95.1% 25.0% -----GFEPLFL-----PPYSPDLNPIERIWLIMKDRWFN-NHISKDRDALI 16 Q2SM05_HAHCH/47-193 99.3% 26.4% --D-KSIWPIYF-----PKYSPELNLIEILWRKVKYNWLP-LGSHETFERLK 17 A8ZPF4_ACAM1/39-182 97.2% 23.6% --KAKNVEIFWL-----PTYSPHLNLIEIFWRFMKYEWIE-FAAYKCLGSLS 18 B0JUR0_MICAN/39-182 97.2% 23.6% --EKKNLKIFWL-----PTYSPHLNLIEILWRFLKYEWIE-FSAYKDRKSLL 19 Q12BS7_POLSJ/169-312 98.6% 22.6% ---AQRLRLILL-----PGYCPELNPDELLNQDVKTNALG-KSRPANKSEMI 20 A0R819_PELPD/171-314 98.6% 21.9% ---KDKIEVFYL-----PSYSPELNPDEYLNNSLKGRVHS-GERAQNVKQLE 21 B8F0C4_THASP/172-315 98.6% 22.6% ---RAQIELFYL-----PPYAPESNPDEYLNHDFKTALRL-EPPSRDDSQLL 22 A1TXP2_MARHV/168-311 98.6% 26.7% ---DGKLKLFFL-----PPYSPELNPDESVWGYIKYHHVG-KKIINSKEQLR 23 Q5P1T1_AROAE/182-325 98.6% 23.3% ---QGKLTLHFL-----PGYAPDLNPDELVWSHAKRTGNA-RRPLQKGETLQ 24 A6LRL5_CLOB8/180-328 99.3% 23.3% ---SEELFLINT-----PRYSPILNPQENIWNKLKNCIFS-TSAFISIDELF 25 Q10V63_TRIEI/166-315 97.9% 16.3% --QYLSEEELLINCTRFAPNAPEQNPVEDIWLQTKNFSIT---FYHLCSSFK 26 D3VKI2_XENNA/117-263 99.3% 22.3% ----LNIELHYL-----PPYSPNLNPIERLWKYANEQIRN-NVYFPDAKTFR 27 Q6LH76_PHOPR/165-309 99.3% 21.9% ----LNIELHYL-----PPYSPNLNPIERLWKVMNKHARN-SRYFATAKEFR 28 Q9K9X4_BACHD/19-163 99.3% 24.0% ---QHRLELVFL-----PPYSPELNLIEGLWKWLKSDVIN-NLFYSSVKEIR 29 Q8ZSE8_NOSS1/20-198 100.0% 13.4% SDPAHRIVFHYT-----PKHSSWLNQIEIWFSILVRKLLR-RASFLSQDDLK 30 Q01P88_SOLUE/181-333 100.0% 12.4% CEVWDRFTIHFT-----PKHGSWLNQAEIEIGLFSRQCLG-KRRIPTLISLR 31 A1VRC2_POLNA/30-181 100.0% 13.2% KALWDRFEFVYT-----PKHGSWLNMAEIEINVMVDQCLS--RRIDSIETVR 32 A1WPJ8_VEREI/180-332 100.0% 13.1% RRILQRIEFHYT-----PKHASWLNMVEIEIGVLRRQCLD--RRIDCRERLI 33 A7ILC4_XANP2/116-266 99.3% 17.1% ---AHWLTVEWL-----PKYAPELNDIEAVWRDLKAHHLA-HQTFKDSDALD 34 D2QCC4_SPILD/162-305 99.3% 22.8% ---LGRMHLERL-----PAYSPELNPVELLWSQLKRNLKN--KAFTSLDELT 35 D3T269_NATMM/179-319 98.6% 18.2% ----DDLTFVRL-----PAYSPELNPVEECWRQLQAALSN--RFFDSLPELT 36 Q5V1W0_HALMA/25-182 98.6% 18.8% CVRGDDLEVWYF-----PSKLPELNAVEGCWDQLQEWFKY--RLVPDISSLK consensus/100% ...........h.....s......s..c.....h.................. consensus/90% .....th.h.hh.....P.hus.hN..E..h..hp..h........p..th. consensus/80% .....thphhah.....P.auPphN.hE.hat.hpt.hht....htshpplh consensus/70% ....tthplhaL.....PsYSP-LN.lEhhat.hKt.hht..thhpshcplh