cov pid 1 [ . . . . : . . . 80 1 Q024F7_SOLUE/372-495 100.0% 100.0% QCPAGKIL-EYVRQ-SKKG--DTTYWQYQA--ES-KDCGGCEYQKQC--CPR-------PEK-GRLVSI-RME----ENE 2 Q8TM48_METAC/43-165 97.6% 25.4% ICPEKQSL-KFLYE-GYE----KERKRKYRLYKG-TECKKCKFSKNC--TKR--------KD-GIRHLK-IAE----FSK 3 A9B2J1_HERA2/343-469 97.6% 14.6% LCAAGLAM-PQQFT-YAMN--TNGPPQERARHRC-PLLYPTATGEPC--PTNDK---HFATG-GCVTTI-GTQ----VGA 4 C5BJH2_TERTT/380-512 100.0% 19.5% VCPEGNPM-WLKHE-TTDQ--YGKCKLSFE-GRL-TDCRHCPRKNEC--MRNPGSADTREGH-GRQVTF-TID---TRNS 5 A6VW41_MARMS/397-527 99.2% 22.0% RCPAGNEM-WCSGT-NVKS--GNQEYARFCGY-L-KDCKVCPLQQQC--MRKP-----PKDR-GRQVQFLNDQS-RKKLS 6 A1SUP8_PSYIN/376-506 99.2% 24.2% RCPAGKEM-WLSVK-SIET-AGRHYVRFSG-Y-L-KDCRVCPLQAQC--MRKV-----PSKQ-GRQVQF-ETNKADKYIS 7 B0VGX1_CLOAI/412-538 99.2% 18.0% VCPNGKTL-TLDNE-EVVR--ANGPERTVKSYRC-EDCQDCPFVQKCIPYKN--------KS-GKNLVY-DPY----LSP 8 A6KZW1_BACV8/387-512 99.2% 15.7% ICPMGQRM-RRIGT-RNVK-TASGYVSENARYRA-VRCEGCPLRCRC--FKA--------KG-NRTIEL-NHR----LRQ 9 Q8A6A5_BACTN/386-511 99.2% 17.3% VCPMGQHM-NRIGT-RRDK-TASGYITESARYKA-QRCEGCPLCGSC--FKA--------RG-NRMIEV-NHR----LNQ 10 Q97LA6_CLOAB/45-170 99.2% 18.1% TCHNNRKL-SPSCIIHKKS--ASGYTSEVTVYEC-EICDNCTLKPKC--TKA--------KK-NRKMQV-SKA----FIK 11 B0S4L2_FINM2/88-218 100.0% 20.6% ICANNKKLIRQKDR-VYTR--KSGFKEVQRVYRC-FECNNCPYQKQC--NKYSK---KDNPQ-TKSLRY-NEE----FNK 12 D2RLI2_ACIFV/390-514 99.2% 19.8% LCPNGKKF-KFVYR-KNIQ--GNQYGRQEEIYEC-EDCNGCPYAERC--KKT--------PH-NRRISL-NRE----LTK 13 R5U1U3_9FIRM/139-263 99.2% 19.8% RCPNGKSF-YLQYR-KNVK--GNKYGRQEEVYQC-EDCSGCPYAEQC--KKT--------DK-NRTVRI-NRE----LTA 14 D3DZ66_METRM/339-463 96.8% 15.5% ICPEGQEL-TLDGI-YQAHPEKGGGNKLKAVYSNFNACNNCINKGVC--FKT--------GH--RSITR-YVH------E 15 B7GJ01_ANOFW/350-465 93.5% 20.2% VCPCGVKF-TYSTS-TRAG--YHEYKPSVK-----GSCTGCPAA------RG--------KG-DRVLRI-SVH-----QE 16 Q63SM4_BURPS/325-443 96.0% 24.4% VCPQGQAL-PYSTT-NRLG--YREYKS-----NA-QICGRCPVRSQC--TNS--------AI-AVKVVT-RHV----WER 17 Q8RCM3_CALS4/321-440 96.8% 22.6% ICPQNEIL-TYVTT-NREG--YREYKS-----NP-EKCKNCPLREKC--TQS--------KD-YTKRIF-RHI----WEG 18 C9ZBC3_STRSW/312-430 95.2% 22.4% TCPAGHTV-ALSDP-G-----GQHHQRKAS--FG-NLCTGCHLRERC--TKA--------RA-GRILTI-RPH-----HD 19 C7M1A8_ACIFD/381-493 91.1% 17.7% SCPQGHRV-PISA---------KGRASFV------KHCTGCPLRDRC--TRS--------KR-GRVLTF-TPA-----TW 20 B0TD92_HELMI/402-524 93.5% 23.7% SCPACYNPLDTSF---DEK----RKVLIA-EFER-STCQECPMQPAC--PVKI------QSK-KATVTI-KQS-----SI 21 D4LK07_9FIRM/296-420 96.8% 18.6% QCPAGELS--TRVE-KRTA--KNGNTYLRYIFSK-VTCRKCPQREKC--RVG--------RS-NAKTR--SYS----ITQ 22 D2AQQ6_STRRD/429-553 96.8% 17.8% TCPRGVTSPPFK----PTL--GDGKPRLSVLFPR-AACRACPDRQAC--TGDA------NGK-GRHLTL-LPE---PLQQ 23 G2P0I1_STRVO/419-541 96.0% 22.0% TCPAGHTS-TTWNP-V--V--SEGIPKTVVSFAA-LDCIPCPFKPQC--TTA--------KKNRRQLSL-HPR---QMTE 24 B0U9Y5_METS4/342-466 98.4% 22.0% TCPGGKES-QSWTP-TLVH--GTTPVIKIK-FAV-RDCRDCSPRPYC--TRS--------RSARRAITI-RPE----AQH 25 B8IGH7_METNO/406-530 98.4% 22.0% TCPAGKGS-QSWTL-ALAR--GTTPVIKIK-FAV-ADCQACPLRPQC--TRS--------TSARRAITI-RPE---AQHE 26 Q8YJT9_NOSS1/402-526 97.6% 21.9% YCPQGKRS-YLWKK-NKNF--YDKPLIYVE-FRQ-RDCLACPVRSQC--TRA--------KTNPRGLSI-QVQS--DY-E 27 A9AVK4_HERA2/404-528 98.4% 21.3% ICPQGHAS-TKW-I-SHQD--RHGNPAIRVTFRP-RDCRACPVRTQC--THT-------ATA-ARGLSL-RPR---EQHE 28 Q8YKP4_NOSS1/402-527 98.4% 17.2% TCPQGKKS-TKKWV-PTQD--KWGNAVINVRFPR-KTCRLCNARALC--TRS--------KTEPRELTL-RPK----AEY consensus/100% .C..t..................t.............h..s.......................h.h............. consensus/90% .Csts.................tt.............C..C..t..C....t........tt..t.h.h........... consensus/80% hCPtGpt...h..........hpt...........ttCptCshp.tC..hpt........tt.tp.lph.p.p.....tt consensus/70% hCPtGpp...h.h..t..t..tpt.ht....ath.ppCpsCPhptpC..h+s........pp.sRtlph.p.p....hpp cov pid 81 . 1 . . . . : ] 155 1 Q024F7_SOLUE/372-495 100.0% 100.0% -EV-AAFREK---M---KTE-AAQQIYKKRGPVAEFPNAWIKEKLGIRKFRLRGMAKATTEALWGVLTYDVQQWI 2 Q8TM48_METAC/43-165 97.6% 25.4% -ER-KQLAEK---M---KTE-EAKEIYRQRQQVVEPAIGNYKENLGFREFLTRGIKSVRNEFNLVCTAVNLKKIW 3 A9B2J1_HERA2/343-469 97.6% 14.6% -TL-RWTID----R---GSA-AYKALYRERA-LVEQINSQAY-ALGIEWPKLRRQSAVTAWTSLIYVVINLRVVH 4 C5BJH2_TERTT/380-512 100.0% 19.5% -PT-AWMQKR---V---DSR-YGKQVYQHRMSVVEPVFANIGTQKGLDRFGLRGKKKVQGQWQLYCLVHNIEKLA 5 A6VW41_MARMS/397-527 99.2% 22.0% -YG-DKMKTK---I---DSP-IGRRQYSKRLGAIEPVFGNITVNKGMNKFTLRGQEKVNAQWQMYCLVHNIEKLR 6 A1SUP8_PSYIN/376-506 99.2% 24.2% -YT-DKMRVK---I---DSS-PGRRQYSKRLGTIEPVFGNITVNKGMNKFTLRGQEKVNAQWQMYCLVHNIEKLR 7 B0VGX1_CLOAI/412-538 99.2% 18.0% -LR-QETVHN---L---QSK-EGKKLMKKRCIEPEAVFASIKWNSKFSRFTVRSLSKCKNQLLLVLLGHNIQKFY 8 A6KZW1_BACV8/387-512 99.2% 15.7% -YK-RRAKEL---L---CSE-KGLKHRGQRCIEPEAVFGQIKNNMNYKRFRHFGKDKVFMDFAFLAIAFNIKKMC 9 Q8A6A5_BACTN/386-511 99.2% 17.3% -YK-RQARER---L---LSE-EGIRHRGRRCIEPEAVFGQMKHNMAYKRFRHVGEDKVTMDFAFFAIAFNIKKMC 10 Q97LA6_CLOAB/45-170 99.2% 18.1% -KR-EISYNN---I---KTE-LGTKLRMNRSIQVEGAFGVLKSDYEFKRFLTRGKNSVKTEFILLCFGYNINKLH 11 B0S4L2_FINM2/88-218 100.0% 20.6% -LR-LESCEN---I---TSE-EGIDERLNRSIQAEGMFSKMKEGLEYDRFRHRGLKGVLCDVNLLVLGINLNKLH 12 D2RLI2_ACIFV/390-514 99.2% 19.8% -VH-ADVIGR---L---TDT-RGFLLRRNRAIQAEGTFGVMKNDREYDRIVRRGMDSVKMEVFLVSIGFNLYKYH 13 R5U1U3_9FIRM/139-263 99.2% 19.8% -MH-QEVIEN---L---ESI-QGALLRMNRSIQAEGTFGIMKNDRWYKRIVRRGIKSVLLEVFLVSIGHNLYKYH 14 D3DZ66_METRM/339-463 96.8% 15.5% -LA-YKTERI---I---SSE-KGIEEYKLRSSTVESHNGTFKRVYLYDFIPITGLKRVQGLMFAIVASYNLIRFL 15 B7GJ01_ANOFW/350-465 93.5% 20.2% -VY-EQMRKR---R---LSL-RGKVLRLVRPATIERSFAESKELHGLRFARYRGVQYVQIQVWITAMIQNLKKWI 16 Q63SM4_BURPS/325-443 96.0% 24.4% -AK-ERVDAR---R---LTE-WGQRIYARRKQTVERSFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNIKKI- 17 Q8RCM3_CALS4/321-440 96.8% 22.6% -YV-EEAEHL---R---HTP-YCKEVYERRKETIERVFADLKEKHGLRWTTLRGKEKLSMQAMLVFAAMNLKKMA 18 C9ZBC3_STRSW/312-430 95.2% 22.4% -LQ-TAARHQ---A---ATDPGWQADYRRWRPPVERAVAWLV-HHGNRRLRYRGTIKNNLWLHTRAAALNLRRLI 19 C7M1A8_ACIFD/381-493 91.1% 17.7% -HA-ISQRAH---F---GDP-AVRLDYQRTRPNVERIHAQLKRKLSGARLRYLGLVRNRLHFELLCATWNLKVLL 20 B0TD92_HELMI/402-524 93.5% 23.7% -LA-AQARERTMQI---KKE--RLAATSKR-AAIEGSISSIKRGQGAGRLRVRGIVKATLVFGMKVLGHNFRQLL 21 D4LK07_9FIRM/296-420 96.8% 18.6% -AS-EKNLER---LKFEESE-YFQERMKIRH-RIEEKNGELKEAHGLRKADSRGLFAMHLQMYFTAFTANVKRIV 22 D2AQQ6_STRRD/429-553 96.8% 17.8% -IQ-TRNRAD---Q---HTE-PWKARYALRA-GCEATVSETTRAHGLRNCRYKGLAKTHVQHVLTAAGTNVIRLA 23 G2P0I1_STRVO/419-541 96.0% 22.0% -AL-RHARTQ---Q---KTE-DWNTEYALRS-GIEGTIRQAITVTGTRRARYRGLAKTHLEHIYSAVALNLIRL- 24 B0U9Y5_METS4/342-466 98.4% 22.0% -KALRVRRER---E---KTA-DFAAEYVRRG-GVEGTIAQGVRSSRLRRTPYFGHAKTHLAHLMTAAAMNLVRLL 25 B8IGH7_METNO/406-530 98.4% 22.0% -AL-RVGRAR---E---QTA-DFAAEYARRA-GVEGTIAQGVRSSRLRRTPYFGHAKTHLAHLMTAAVMNLARLL 26 Q8YJT9_NOSS1/402-526 97.6% 21.9% -AL-QKARDR---Q---KTE-EFQKQYELRS-GIEGTISQGIRAFELRDCRYIGLAKTHLQHILTAAAINLSRVF 27 A9AVK4_HERA2/404-528 98.4% 21.3% -VL-QQRRHA---Q---TTD-AFKRQYAKRA-GVEGLMSQATRVCGMRQSRYGGMAKTRLQHVLTACALNLLRSV 28 Q8YKP4_NOSS1/402-527 98.4% 17.2% QAL-QTVRQQ---Q---LST-DWKKLYDTRA-GVEGTLSQGIVTLGLRQARYIGLVKVRLQHLLSAVALNVVRMV consensus/100% ..................p...h...h..h....E...t..h.....t....ht.......h.h..h..sh.... consensus/90% ........t.........s...h...h..R....E...u.hh...thp.h.hhG..ts...h.hhhhshNl.phh consensus/80% .hh.tthhtp.......tot..h.t.ht.Rt.thEthhuphh.ththcphhhhGhtpsphth.hhshshNl.+hh consensus/70% .hh.pphppp...h...pop..htt.htpRt.tlEsshuphppshthcchphpGht+sphphhhhshshNlt+hh