cov pid 1 [ . . . . : . . . 80 1 DISI_AGKPI/1-7 100.0% 100.0% EAGEECDCGSPE-------NPCCDAAT---------CKLRPGAQCA--EGLCCD--QCKFMKEGTV--CRAR---GDDVN 2 Q98995/1-71 98.6% 51.4% VSGNELLQNSG--------NPCCDPVT---------CQPRRGEHCV--SGKCCR--NCKFLRAGTV--CKRAV--GDDMD 3 DISJ_BOTJA/1-7 98.6% 55.8% EVGEECDCGTP-ENC---QNECCDAAT---------CKLKSGSQCG--HGDCCE--QCKFSKSGTE--CRASMS-ECDPA 4 HR1B_TRIFL/1-7 98.6% 53.2% EAGEECDCGSP-ENC---QYQCCDAAS---------CKLHSWVKCE--SGECCD--QCRFRTAGTE--CRAAES-ECDIP 5 Q90499/1-76 98.6% 53.2% EVGEECDCGSR-TYC---RNPCCNATT---------CKLTPGSQCA--DGECCN--QCRFRPARTE--CRRKID-DCDVP 6 Q28475/1-76 98.6% 48.1% DEGEECDCGPP-QEC---TNPCCDAHT---------CVLKPGFTCA--EGECCE--SCQIKKAGSI--CRPAED-ECDFP 7 Q61824/1-76 98.6% 44.2% EEGEECDCGEP-EEC---TNRCCNATT---------CTLKPDAVCA--HGQCCE--DCQLKPPGTA--CRGSSN-SCDLP 8 G1125028/1-73 94.4% 45.9% ---EECDCGEE-EEC---KNPCCNASN---------CTLKEGAECA--HGSCCH--QCKLVAPGTQ--CREQVR-QCDLP 9 MS2_HUMAN/1-76 98.6% 42.9% ERGEQCDCGPP-EDC---RNRCCNSTT---------CQLAEGAQCA--HGTCCQ--ECKVKPAGEL--CRPKKD-MCDLE 10 Q13444/1-77 98.6% 43.6% EPGEQCDCGFL-DDC---VDPCCDSLT---------CQLRPGAQCAS-DGPCCQ--NCQLRPSGWQ--CRPTRG-DCDLP 11 P90974/1-77 98.6% 43.6% DGSEECDCGSR-ENC---QDPCCDPLT---------CTLRPHAQCAA-HHKCCH--RCELRKAGDT--CRSSKS-PCDVA 12 Q28477/1-74 95.8% 42.9% EDTEECDCGS---AC--HLDPCCDPT----------CTLKEHAECS--HGLCCL--DCTFRRKGFL--CRPTQD-ECDLP 13 P70505/1-74 95.8% 48.1% EESEECDCGN---AC--DSHPCCEPT----------CTLKVGAQCS--EGLCCY--KCTFKKKGTL--CRPAED-VCDLP 14 E1181593/1-74 95.8% 42.9% EDTEQCDCGS---LC--QRHPCCDEN----------CILKAKAECS--DGPCCH--KCKFQRKGYP--CRPSSR-SCDLP 15 Q28659/1-74 95.8% 42.9% ETPEQCDCGS---DC--ALDPCCDSM----------CRLKDNAQCG--YGLCCF--RCKYRRKGFL--CRSIRG-NCDLP 16 Q60410/1-74 95.8% 36.4% EESEQCDCGV---NC--DTSECCDQA----------CNLKGNATCS--NELCCS--DCQYKNSGYL--CRPSVG-PCDLP 17 G2739135/1-76 98.6% 45.5% EEGEECDCGTIR-QC--AKDPCCLLN----------CTLHPGAACA--FGICCK--DCKFLPSGTL--CRQQVG-ECDLP 18 Q10718/1-77 100.0% 48.1% DAGEECDCGTPK-EC--ELDPCCEGST---------CKLKSFAECA--YGDCCK--DCRFLPGGTL--CRGKTS-ECDVP 19 G2231331/1-77 100.0% 42.9% EQGEKCDCGSVQ-EC--PTISCCDPTS---------CKLRENGECL--TGLCCK--DCKLLPKGTL--CRMPKT-ECDLA 20 Q60473/1-76 98.6% 35.1% DEGELCDCGTFK-QC--YTNPCCQTT----------CMFTAGSICD--GQDCCT--NCTYSPSGTL--CRPIRN-ICDLP 21 P70535/1-76 98.6% 37.7% DIGEQCDCGSHK-AC--YADPCCGSN----------CKLTAGSICD--KELCCA--NCTYSPSGTL--CRPIQN-ICDLP 22 Q28484/1-76 98.6% 39.0% EGREECDCGSFK-QC--YASRCCRSD----------CRLTPGSICH--LGDCCT--NCSFSAQGTL--CRPIQN-ICDLP 23 Q60815/1-76 98.6% 41.6% EASEKCDCGSVK-DC--TTDKCCEVN----------CEFTQGSSCA--AGGCCL--SCKFAPTGTI--CRDKNG-ICDLP 24 P97777/1-76 98.6% 40.3% DDNEQCDCGTLK-DC--LSNHCCGTN----------CQLIGSSTCA--EGLCCQ--SCRFAPTGKV--CRHTNG-ICDLP 25 Q99965/1-79 100.0% 46.8% EAGEECDCGTEQ-DCALIGETCCDIAT---------CRFKAGSNCA--EGPCCE--NCLFMSKERM--CRPSFE-ECDLP 26 Q60411/1-76 100.0% 47.4% EQGEDCDCGSQE-EC---QDTCCDAAT---------CRLKSTSRCA--QGPCCN--QCEFKTKGEV--CRESTD-ECDLP 27 Q28660/1-79 100.0% 46.8% EAGEMCDCGTAE-ECGRAVPICCNSAT---------CRLEVGSQCA--EGECCE--NCTFKERGQS--CRPPVG-ECDLF 28 Q60472/1-79 100.0% 38.0% EEGEECDCGTLR-NC--THKKCCDPMQ---------CRMKKGAKCG--TGPCCT-VDCQFQKANVL--CRKSVDKDCDFD 29 Q60816/1-78 100.0% 34.6% EMNEQCDCGTLK-NC--THRKCCDPMS---------CRLKNKATCG--SGECCS-QDCTVKMNDVV--CRKSVD-ECDLL 30 Q28483/1-79 100.0% 40.5% EGGEECDCGNKD-NC--THKLCCDALT---------CRLKDNAQCG--SGDCCS-KDCKFKPANTI--CRKSVDVECDFT 31 Q95194/1-79 100.0% 38.0% ESNEECDCGNKK-EC--QFKKCCDYNT---------CKLKGSVKCG--SGPCCT-SKCELSIVGTP--CRKSVDPECDFT 32 Q28482/1-79 100.0% 35.4% EPTEQCDCGYRK-AC--TFKKCCNPAD---------CTLIGFAECG--SGPCCNNKTCTIYARGHV--CRKSID-MCDFP 33 P70534/1-79 100.0% 35.4% EPPEQCDCGPAE-RC--SHKKCCKSED---------CTLLSDAECG--SGACCDKRTCKIAERGRL--CRKSTD-QCDFP 34 E342458/1-77 98.6% 47.4% EPGEECDCGPL--KC---DNHCCNGST---------CKLIGEAECA--SGDCCDLKTCKPKPRATV--CRAAIG-ICDLD 35 Q63202/1-79 100.0% 40.5% EEGEVCDCGQEG--CDDKPPPCCNPTT---------CQLSEGSTCS--TGSCCD-ASCNLKAKGEL--CRPANQ-ECDVT 36 Q14808/1-76 95.8% 41.0% EAGEECDCGSVQ-ECSRAGGNCCKK-----------CTLTHDAMCS--DGLCCR--RCKYEPRGVS--CREAVN-ECDIA 37 E339143/1-77 95.8% 44.3% EDGEECDCGE---DC--ENNPCCDGKT---------CKLTKGSLCDDQQDACCY--QCHFKNAGTL--CRQSTN-PCDKP 38 Q10742/1-84 97.2% 38.8% EQGEECDCGYS-DQC---KDECCFDANQPEGRK---CKLKPGKQCSPSQGPCCT-AQCAFKSKSEK--CRDDS--DCARE 39 G2739037/1-94 98.6% 30.9% EPGEECDCGFSQADCDQMGDKCCVPHEARGNGGPGPCKRKPGAQCSPSQGYCCNPDTCSLHGKNEEKICRQES--ECSNL 40 P78536/1-78 98.6% 30.4% DEGEECDPGIMY----LNNDTCCNS-D---------CTLKEGVQCSDRNSPCCK--NCQFETAQKK--CQEAINATCKGV consensus/100% ...p.h..s............CC.............C.......C....t.CC...pC.....t....Cp......st.. consensus/90% -.sEpCDCG.....C....t.CCt............Cpht.ts.Cs..ts.CC...pCph..ts....CR...t..CDh. consensus/80% -.sEpCDCG....tC....p.CCps...........CpLp.supCu..pG.CCp..pCpht.tup...CR.t.s..CDhs consensus/70% EtuEpCDCGs...pC...ts.CCsssp.........CpLpssupCu..pG.CCp..pCphp.tGph..CR.s.s.tCDls cov pid 81 . ] 97 1 DISI_AGKPI/1-7 100.0% 100.0% DYCNGISAGCPR-NPFH 2 Q98995/1-71 98.6% 51.4% DYCTGISSDCPR-NPYK 3 DISJ_BOTJA/1-7 98.6% 55.8% EHCTGQSSECPA-DVFH 4 HR1B_TRIFL/1-7 98.6% 53.2% ESCTGQSADCPT-DRFH 5 Q90499/1-76 98.6% 53.2% EYCTGQSGECPL-DVFQ 6 Q28475/1-76 98.6% 48.1% EMCTGHSPACPK-DQFR 7 Q61824/1-76 98.6% 44.2% EFCTGTAPHCPA-NVYL 8 G1125028/1-73 94.4% 45.9% EFCTGKSPHCPT-NYYQ 9 MS2_HUMAN/1-76 98.6% 42.9% EFCDGRHPECPE-DAFQ 10 Q13444/1-77 98.6% 43.6% EFCPGDSSQCPP-DVSL 11 P90974/1-77 98.6% 43.6% EQCDGKSGDCPP-DGHL 12 Q28477/1-74 95.8% 42.9% EYCDGSSAECPA-DSYK 13 P70505/1-74 95.8% 48.1% EYCNGITGECPA-NSYM 14 E1181593/1-74 95.8% 42.9% EFCNGTSALCPD-NRHK 15 Q28659/1-74 95.8% 42.9% EYCSGKSASCPP-DAYK 16 Q60410/1-74 95.8% 36.4% EYCTGQSGKCPL-DTYK 17 G2739135/1-76 98.6% 45.5% EWCNGTSHQCPD-DVYV 18 Q10718/1-77 100.0% 48.1% EYCNGSSQFCQP-DVFI 19 G2231331/1-77 100.0% 42.9% EYCDGASNHCPL-DMYK 20 Q60473/1-76 98.6% 35.1% EYCTGSQLTCPE-NLYM 21 P70535/1-76 98.6% 37.7% EYCSGNNIFCPA-DTYL 22 Q28484/1-76 98.6% 39.0% EYCHGTTLTCPP-DLYL 23 Q60815/1-76 98.6% 41.6% EYCSGASEHCPG-NFYI 24 P97777/1-76 98.6% 40.3% EYCSGVSEHCPQ-NFYI 25 Q99965/1-79 100.0% 46.8% EYCNGSSASCPE-NHYV 26 Q60411/1-76 100.0% 47.4% EYCNGSSGACQE-DLYV 27 Q28660/1-79 100.0% 46.8% EYCNGTSALCPD-DIVI 28 Q60472/1-79 100.0% 38.0% EYCNGRSGDCVH-DTYA 29 Q60816/1-78 100.0% 34.6% EYCNGKDPYCVL-THMH 30 Q28483/1-79 100.0% 40.5% EFCNGSYPYCLL-DTYV 31 Q95194/1-79 100.0% 38.0% EYCNGTSSDCVP-DTYA 32 Q28482/1-79 100.0% 35.4% EYCNGTSEFCVP-DVKA 33 P70534/1-79 100.0% 35.4% EFCNGTSEFCVA-DIKA 34 E342458/1-77 98.6% 47.4% EYCNGETNDCPA-DFFV 35 Q63202/1-79 100.0% 40.5% EYCNGTSEVCEE-DFFV 36 Q14808/1-76 95.8% 41.0% ETCTGDSSQCPP-NLH- 37 E339143/1-77 95.8% 44.3% EFCTGISSKCPVDENW- 38 Q10742/1-84 97.2% 38.8% GICNGFTALCPASDPK- 39 G2739037/1-94 98.6% 30.9% QTCDGRNAQCPVSPPK- 40 P78536/1-78 98.6% 30.4% SYCTGNSSECPP-PGNA consensus/100% t.C.G....C....... consensus/90% -hCsG.s..Cs..s.h. consensus/80% EaCsGpo..Cs..shah consensus/70% EaCsGpSstCP..shah