cov pid 1 [ . . . . : . . . 80 1 Q9W639_spt/1-1 100.0% 100.0% ESETFAKRAIESLVKKLKEK---KDELDSLITAITTNGAHPS------------------KCVTIQ-------------R 2 T16725_pir/1-1 99.1% 50.4% EDSDFVRKAIESLVKKLKDK---RIELDALITAVTSNGKQPTGYINFSSLWVFQRE----KHVACQLSKITNKIFKFFFR 3 Q19783_spt/1-1 100.0% 52.2% IDREFDQKACESLVKKLKDK---KNDLQNLIDVVLSKGTKYT------------------GCITIP-------------R 4 MAD_DROME/1-11 98.2% 55.4% EEEKWAEKAVDSLVKKLKKR---KGAIEELERALSCPGQPS-------------------KCVTIP-------------R 5 SMA2_CAEEL/1-1 99.1% 46.0% EDENWAKKAIDNLMKKLIKHN--KQALENLEFALRCQGQQKT------------------ECVTIP-------------R 6 SMA3_CAEEL/1-1 99.1% 40.5% DEEKWCEKAVEALVKKLKKKNNGCGTLEDLECVLANPCTNS-------------------RCITIA-------------K 7 O14510_spt/1-1 97.3% 55.4% QEEKWCEKAVKSLVKKLKKT----GQLDELEKAITTQNVNT-------------------KCITIP-------------R 8 AAF34722_s/1-1 97.3% 48.2% KEEKWKEKAVKSLVKRLKNG----TQLDELERALVSQDPST-------------------RCVTIP-------------R 9 O96660_spt/1-1 97.3% 41.1% VEGKWSEKAVKNLVKKIKKN----SQLEELERAISTQNCQT-------------------RCVTVP-------------R 10 O35182_spt/1-1 93.6% 34.2% LLEQELKTVTYSLLKRLKER-----SLDTLLEAVESRGGVPG------------------GCVLVPR------------- 11 Q9W734_spt/1-1 93.6% 34.2% LLERELKAVTYALLKRLKER-----SLHSLLQAVESRGGTPG------------------GCVLVAR------------- 12 O57475_spt/1-1 87.3% 30.4% AGSPELRAAASAILKRLKEQ-----TLCVLLEAVESRGAAPG------------------GCVMVTR------------- 13 O57522_spt/1-1 92.7% 24.1% SEAAQLKALAHCVLEELKEK-----QLEGLLQAVECKGGARS------------------PCLLLPAA------------ 14 O14740_spt/1-1 94.5% 25.6% GAEADLKALTHSVLKKLKER-----QLELLLQAVESRGGTRT------------------ACLLLPG------------- 15 O15968 89.1% 23.1% QNGKRFREDFEALMKQLKRK-----QRNELLLAVKSRLDPPTKTQRDVVEPTTTTAPTYLQCILIP-------------- 16 Q21733 90.9% 21.9% GTIYWALKVTR-LLSRVAKK---HQCFEAFYDAVI-KGDPKT------------------RCCPAHNE------------ 17 CAB70215 97.3% 16.8% SDERRARRRFLRLMRGFDAE-----DVEVIRKAVESDGVDSK------------------ACAPGP-------------- 18 AE003844 90.9% 16.0% VKQKWASRLLGKLRKDITQE-----SREDFVQSIIGKRKS--------------------ICVLSN-------------P consensus/100% .......t.h..lhpth.tt.....thp.h..sl...........................ph................. consensus/90% ..t...pthh.tlhcpltpp.....thp.h..sl.s.t.......................Ch.h............... consensus/80% .ttt.hcthhtsLhKclccp.....plctL.pAl.spst.....................tClhhs.............. consensus/70% tppphhccshcsLlK+LKcc.....pL-tL.pAlpspsss....................tClhls.............. cov pid 81 . 1 . . . . : . 160 1 Q9W639_spt/1-1 100.0% 100.0% TLDGRLQVA------------GRKGFPHVIYARLWRWPDLH----KNELKHVKYCQYAFDLKC----------------- 2 T16725_pir/1-1 99.1% 50.4% SLDGRLQVA------------GRKGVPHVVYARIWRWPKVS----KNELVKLVQCQTSSDHP------------------ 3 Q19783_spt/1-1 100.0% 52.2% TLDGRLQVH------------GRKGFPHVVYGKLWRFNEMT----KNETRHVDHCKHAFEMKSDMV-------------- 4 MAD_DROME/1-11 98.2% 55.4% SLDGRLQVS------------HRKGLPHVIYCRVWRWPDLQS---HHELKPLELCQYPFSAKQK---------------- 5 SMA2_CAEEL/1-1 99.1% 46.0% SLDGRLQIS------------HRKALPHVIYCRVYRWPDLQS---HHELKAIEDCRFCYESGQK---------------- 6 SMA3_CAEEL/1-1 99.1% 40.5% SLDGRLQVS------------HKKGLPHVIYCRVWRWPDISS---PHELRSIDTCSYPYESSSKT--------------- 7 O14510_spt/1-1 97.3% 55.4% SLDGRLQVS------------HRKGLPHVIYCRLWRWPDLHS---HHELRAMELCEFAFNMKKD---------------- 8 AAF34722_s/1-1 97.3% 48.2% SLDGRLQVA------------QKKGLPHVFYCQLWRWPDLHT---QHELRPIATCEYSFQSKRD---------------- 9 O96660_spt/1-1 97.3% 41.1% SKPAPAGEH------------LRKGLPHVIYCRLWRWPDLQS---QNELKPLDHCEYAFHLRKE---------------- 10 O35182_spt/1-1 93.6% 34.2% -ADLRLGG--------------QPAPPQLLLGRLFRWPDLQH---AVELKPLCGCHSFTAAADGP--------------- 11 Q9W734_spt/1-1 93.6% 34.2% -GELRLGA-------------ARRPPPHLLLGKLFRWPDLQH---PAELKALCECQSFG-AADGP--------------- 12 O57475_spt/1-1 87.3% 30.4% ----------------------HGPPPHLLLCRLFRWPELQH---PGQLKALSGCQGAGGSDNNSG-------------- 13 O57522_spt/1-1 92.7% 24.1% KLDSRLG--------------QQAFSLPLLLCKVFRWPDLRH---SSDVKRLSCCDSYG--KNNPE-------------- 14 O14740_spt/1-1 94.5% 25.6% RLDCRLGPGAPA--GAQPAQPPSSYSLPLLLCKVFRWPDLRH---SSEVKRLCCCESYG--KINPE-------------- 15 O15968 89.1% 23.1% ---CKTQT---------------VWEPHVTASRLFFWRELWN---AKELKRLPTCPAAR--DCI---------------- 16 Q21733 90.9% 21.9% KLIGNFG----------------RAIMCVL--RAFRFPVIRY---ESQVKSILTCRHAFNSHSR---------------- 17 CAB70215 97.3% 16.8% PMDERVEEDPPDEDSGLIPQIDRPMSMPYLCCKLWRWKDLQVDAALHRLEALPWCRFGRVTINNATENPKKLPQCLVTPS 18 AE003844 90.9% 16.0% DQKGKMRRIDCLR------QADKVWRLDLVMVILFKAIPLESTD-GERLEKNPECLHPG--------------------- consensus/100% ............................hh...hahh..h.......ph.....C......................... consensus/90% .....ht.....................lhhspla+a..lp.....tplc.h..C...h..................... consensus/80% .h.t+ht...............phh..pllhs+laRWs-lp.....pcl+.l..Cp..h..tp................. consensus/70% ph-sRlt...............+ts.Pcllhs+laRWP-Lpp...tpEL+tlstCphsh..tpt................ cov pid 161 . . ] 183 1 Q9W639_spt/1-1 100.0% 100.0% ------DSVCVNPYHYERVVSPG 2 T16725_pir/1-1 99.1% 50.4% ------DNICINPYHYERVVSNR 3 Q19783_spt/1-1 100.0% 52.2% ------GEVCVNPYHYEIVIGTM 4 MAD_DROME/1-11 98.2% 55.4% -------EVCINPYHYKRVESPV 5 SMA2_CAEEL/1-1 99.1% 46.0% -------DICINPYHYKRVHATG 6 SMA3_CAEEL/1-1 99.1% 40.5% ------MYICINPYHYQRLSRPQ 7 O14510_spt/1-1 97.3% 55.4% -------EVCVNPYHYQRVETPV 8 AAF34722_s/1-1 97.3% 48.2% -------EVCINPYHYRRIENPV 9 O96660_spt/1-1 97.3% 41.1% -------EICINPYHYKKIELSI 10 O35182_spt/1-1 93.6% 34.2% -------TVCCNPYHFSRLCGPE 11 Q9W734_spt/1-1 93.6% 34.2% -------TVCCNPYHFSRLCGPE 12 O57475_spt/1-1 87.3% 30.4% -------CCCCNPYHYSRVCEPE 13 O57522_spt/1-1 92.7% 24.1% -------LLCCNPHHLSRLCELE 14 O14740_spt/1-1 94.5% 25.6% -------LVCCNPHHLSRLCELE 15 O15968 89.1% 23.1% -------YMCCNPLHWFRILHQP 16 Q21733 90.9% 21.9% -------NVCLNPYHYRWVELPT 17 CAB70215 97.3% 16.8% KLLKRGGISCCNPYHYALWIRPE 18 AE003844 90.9% 16.0% --------LCVNPYHINVSVREL consensus/100% .........ChNPhHh.h..... consensus/90% ........hChNPaHhthh.... consensus/80% ........lChNPYHaphl.t.. consensus/70% ........lChNPYHapRl.ts.