cov pid 1 [ . . . . : . . . 80 1 MAD_DROME/1-18 100.0% 100.0% AFWASIAYYELNCRVGEVFHCNNN---SVIVDGFTNPS---NNSDRCCLGQLSNV--NRNSTIENTRRHIGKGVHLYYVT 2 O14510_spt/1-1 99.4% 76.3% AFWCSISYYELNQRVGETFHASQP---SMTVDGFTDP----SNSERFCLGLLSNV--NRNAAVELTRRHIGRGVRLYYIG 3 AAF34722_s/1-1 99.4% 71.7% EYWCSLYYYEMNTRVGDTFHCSSP---CLTVDGFTDP----NRHNRFCLGLLSNV--NRGHQIELTRRHIGKGVKLYYIG 4 SMA2_CAEEL/1-1 100.0% 62.3% QFWATVSYYELNTRVGEQVKVSST---TITIDGFTDPC---INGSKISLGLFSNV--NRNATIENTRRHIGNGVKLTYVR 5 SMA3_CAEEL/1-1 99.4% 53.1% KSWAQITYFELNSRVGEVFKLVNL---SITVDGYTNPS---NSNTRICLGQLTNV--NRNGTIENTRMHIGKGIQLDNKE 6 Q9W639_spt/1-2 99.4% 37.9% DYWCSIAYFEMDVQVGETFKVPSSCP-IVTVDGYVDP----SGGDRFCLGQLSNV--HRTEAIERARLHIGKGVQLECKG 7 O62609_spt/1-2 97.1% 36.0% EYWCSIAYFELDTQVGETFKVPSAKP-NVIIDGYVDP----SGGNRFCLGALSNV--HRTEQSERARLHIGKGVQLDLRG 8 T16725_pir/1-2 99.4% 32.2% DNWCSIIYYELDTPIGETFKVSARDHGKVIVDGGMDPHG--ENEGRLCLGALSNV--HRTEASEKARIHIGRGVELTAHA 9 O35182_spt/1-1 92.5% 31.8% SHWCSVAYWEHRTRVGRLYAVYD-----QAVSIFYDL----PQGSGFCLGQLNLE--QRSESVRRTRSKIGFGILLSKEP 10 O57475_spt/1-1 93.6% 32.6% GHWCSVAYWEHRTRVGRLYAVCQ-----PSVSIFYDL----PQGSGFCLGQLNLE--NRSEAAARTRGKIGLGIVLSRET 11 O57522_spt/1-1 93.6% 27.1% SHWCMVAYWEEKTRVGRLYSVQE-----PSLDIFYDL----PQGNGFCLGQLNSD--NKSQLVQKVRSKIGYGIQLTKEV 12 Q19783_spt/1-2 98.3% 22.8% EKWGTIVYYEKNLQIGEKKCSRGN----FHVDGGFICS-----ENRYSLGLEPNP--IREPVAFKVRKAIVDGIRFSYKK 13 O15968_spt/1-1 94.8% 30.5% QVWCQIAYWEMAHRVGEFFHAKT-----NAVNIYTDGIVA-SEVDSMCLRDLTPAGNQIHSVVPTARHTVGLGVTLSLEN 14 Q21733 97.1% 35.4% PSWLKLIYYEEGTMIGEKADVEG---HHCLIDGFTASRTDSETRSRFSLGWYNNP--NRSPQTAEVRGLIGKGVRFYLLA 15 O17760 98.8% 31.8% KPWCTIFYYELTVRLGKAFEAKVP---TITIDGATGA----SDECRMSLTSQPSS---RNSKSSQIRNTVGAGIQLAYEN 16 Q18454 89.0% 18.2% --------MERCKRVAKAYLRKT----TVIIDGSEDE----FDGKTLGFNHFENP--TRDDHTKEIRAKIADGVILKMDY 17 AE003824 94.2% 18.3% EIWAKIIVFEKNRRVAKAYARSS----VITINGSKNG----FDGVRIGLNGFDNP--MRDAETKVIKKSIGDGFKIKMDD 18 CAB70215 95.4% 14.4% RSWAKMTRYERKEQIGDTVWLHGP---FAAVGVLSKS----VHDAQLECSPWDLK---NEVSFALIRQADPIGSTNP--- consensus/100% ........hE.t..luc.h...........lsh............ththt.........t.....h+...s.G....... consensus/90% ..Wh.h.haE.t..luchh.h.t.......lsh..t......tttthshs..s.....pp.....hR.tls.Gh.h.... consensus/80% t.WsplhYaEhppplGchhth.s......hlshhhs......ptsphsLs.hsss...Rsttht.hR.pIG.Glpl.h.. consensus/70% p.WsplhYaEhsppVGchapsps.....htlDGhhss.....pssphsLG.hsss..pRstthppsRtpIGtGlpLth.s cov pid 81 . 1 . . . . : . 160 1 MAD_DROME/1-18 100.0% 100.0% --GEVYAECLSDSAIFVQSRNCNY----HHGFHP-STVCKIPPGCS---------LKIFNNQEFAQ-------------- 2 O14510_spt/1-1 99.4% 76.3% --GEVFAECLSDSAIFVQSPNCNQ----RYGWHP-ATVCKIPPGCN---------LKIFNNQEFAA-------------- 3 AAF34722_s/1-1 99.4% 71.7% --GEVFAECLSDSAIFVQSPNCNY----MYKWHP-ATVCKIPPGCN---------LKIFNNQEFAN-------------- 4 SMA2_CAEEL/1-1 100.0% 62.3% SNGSLFAQCESDSAIFVQSSNCNY----INGFHS-TTVVKIANKCS---------LKIFDMEIFRQ-------------- 5 SMA3_CAEEL/1-1 99.4% 53.1% DQMHIMITNNSDMPVFVQSKNTNL----MMNMPL-VKVCRIPPHSQ---------LCVFEFNLFFQ-------------- 6 Q9W639_spt/1-2 99.4% 37.9% E-GDVWVRCLSDHAVFVQSYYLDR----EAGRAPGDAVHKIYPSAY---------IKVFDLRQCHRQMQQQAATAQAAAA 7 O62609_spt/1-2 97.1% 36.0% E-GDVWLRCLSDNSVFVQSYYLDR----EAGRTPGDAVHKIYPAAC---------IKVFDLRQCHQQMHSLATNAQAAAA 8 T16725_pir/1-2 99.4% 32.2% ---DGNISITSNCKIFVRSGYLDY----THGSEYSSKAHRFTPNESS--------FTVFDIRWAYMQMLRRSRSSNEAVR 9 O35182_spt/1-1 92.5% 31.8% --DGVWAYNRGEHPIFVNSPTLDA----PGGRAL--VVRKVPPGYS---------IKVFDFERSGLLQH----------- 10 O57475_spt/1-1 93.6% 32.6% --DGVWAYNRSDHPIFVNSPTLDA----PACRPL--VVRKVMPGYS---------LKVFDYKKSCVLRHHP--------- 11 O57522_spt/1-1 93.6% 27.1% --DGVWVYNRSSYPIFIKSATLDN----PDSRTL--LVHKVFPGFS---------IKAFDYEKAYSLQRL---------- 12 Q19783_spt/1-2 98.3% 22.8% D-GSVWLQNRMKYPVFVTSGYLDE----QSGGLKKDKVHKVYGCAS---------IKTFGFNVSKQIIRDALLSKQMATM 13 O15968_spt/1-1 94.8% 30.5% --GDVWIYNRGNTTIFVDSPTL------SENLDR---VCKVMPGYC---------LKAFETNRAEL-------------- 14 Q21733 97.1% 35.4% --GEVYVENLCNIPVFVQSIGANM----KNGFQL-NTVSKLPPTGT---------MKVFDMRLFSKQLRT---------- 15 O17760 98.8% 31.8% --GELWLTVLTDQIVFVQCPFLNQ----TLNKPL-KYVFRLQNKGDQ------KRMKIFDKEQFEQ-------------- 16 Q18454 89.0% 18.2% -QGNIKGMARGATPI--VCQGWKE----PRNNCISDRLVRLHGKLNHGAMEDEKAYKVFDMRKFKH-------------- 17 AE003824 94.2% 18.3% T-GNIFIKRYGKSSIYVNSTSQGNEETVIGGDIIQMPQMSLTAATS---------ARLFDMKKFQTN------------- 18 CAB70215 95.4% 14.4% --EDVWLYNSGTRPLFLSMTPN------VSSTKD--TLRRLSPGYC---------IRVHRGEVSAS-------------- consensus/100% ...th.h....t..l...............t........ph.st...........hphat.p.................. consensus/90% ...tlhh...sp..lalps...........s......hh+l.st.p.........hphFp.p.................. consensus/80% ..splah.shus.slFVpS..hs.......sh....hlh+l.sths.........h+lFshp..t............... consensus/70% ..splah.shuspslFVpS.shs......tsht...hVp+l.Pshs.........lKlF-hp.htp.............. cov pid 161 . . . 2 . . . ] 233 1 MAD_DROME/1-18 100.0% 100.0% --------------------LLSQSVNNGFEAVYELTK-MCTIRMSFVKGWGAEYH-RQDVTSTPCWIEIHLH 2 O14510_spt/1-1 99.4% 76.3% --------------------LLAQSVNQGFEAVYQLTR-MCTIRMSFVKGWGAEYR-RQTVTSTPCWIELHLN 3 AAF34722_s/1-1 99.4% 71.7% --------------------LLTENVTKGFEAVYSLTN-MCTIRMSFVKGWGADYR-RQTVTSTPCWIEIHLN 4 SMA2_CAEEL/1-1 100.0% 62.3% --------------------LLEDCSRRGFDASFDLQK-MTFIRMSFVKGWGAEYQ-RQDVTSTPCWIEIHLH 5 SMA3_CAEEL/1-1 99.4% 53.1% --------------------MLEQSCND-SDGLNELSK-HCFIRISFVKGWGEDYP-RQDVTSTPCWLELRLN 6 Q9W639_spt/1-2 99.4% 37.9% AQAAAVAGNIPGPGSVGGIAPAISLSAAAGIGVDDLRR-LCILRMSFVKGWGPDYP-RQSIKETPCWIEIHLH 7 O62609_spt/1-2 97.1% 36.0% AQAAAVAGVANQQMGGGGRS----MTAAAGIGVDDLRR-LCILRLSFVKGWGPDYP-RQSIKETPCWIEVHLH 8 T16725_pir/1-2 99.4% 32.2% AQAAAVAGYAP---------MSVMPAIMPDSGVDRMRRDFCTIAISFVKAWGDVYQ-RKTIKETPCWIEVTLH 9 O35182_spt/1-1 92.5% 31.8% --------------------------ADAAHGPYDPH----SVRISFAKGWGPCYS-RQFITSCPCWLEILLN 10 O57475_spt/1-1 93.6% 32.6% ------------------------TPPEHTDGPYDPN----SVRISFAKGWGPCYS-RQMITSCPCWLEVLLG 11 O57522_spt/1-1 93.6% 27.1% ------------------------NDHEFMQQPWTGF----TVQISFVKGWGQCYT-RQFISSCPCWLEVIFN 12 Q19783_spt/1-2 98.3% 22.8% YLQGKLTPMN-----YIYEKKTQEELRREATRTTDSLAKYCCVRVSFCKGFGEAYPERPSIHDCPVWIELKIN 13 O15968_spt/1-1 94.8% 30.5% --------------------LSMRDHGHHPMGPVDYFS----IKISFGKGWGRDYK-RQDIMGCPCWLEVHFS 14 Q21733 97.1% 35.4% ------------------------AAEKTYQDVYCLSR-MCTVRVSFCKGWGEHYR-RSTVLRSPVWFQAHLN 15 O17760 98.8% 31.8% ------------------EKTLALGPLTEKEVADERMRIFSNIRVSFCKGFGETYS-RLKVVNLPCWIEIILH 16 Q18454 89.0% 18.2% --------------------SLERELHDGTPDARNLLL-KTCMRVALVKD-GADMN-R-----TPCWF-AIVN 17 AE003824 94.2% 18.3% ---------------------INREFARTYPERGRLER-QCLSAVSLVKS-------NNNLINSPVWI-LVVN 18 CAB70215 95.4% 14.4% --------------------APASERTKVRRPSKDPALAQQNLVISVGKGWGPNYS-RLYLTDIPCRYEVSFA consensus/100% ..................................p.........huhsKs.......p......Pshh.h.ht consensus/90% ...........................t......p.......hthShsKu.G..h..R..l.t.PsWh.hhht consensus/80% ..........................tp.h.ss.p.......lphSFsKGaG.pY..R..lhpsPCWlElhlp consensus/70% ........................t.tpthpsshchtt..shlRlSFsKGWG.sYp.RpplpssPCWlElhlp