cov pid 1 [ . . . . : . . . 80 1 O00546/1-115 100.0% 100.0% QCVDIPADLRLCHNVG--YKKMVLPNLLEHETMA--EVKQQ---ASSWVPLLNKN-CHAGTQVFLCSLFAPVCLDRP--- 2 O42397/1-116 100.0% 58.6% SCTAIPRSMALCYDIG--YSEMRIPNLLEHETMP--EVIQQ---SSSWLPLLARE-CHPDARIFLCSLFAPICLDRL--- 3 O14778/1-117 98.3% 53.8% NCKPIPANLQLCHGIE--YQNMRLPNLLGHETMK--EVLEQ---AGAWIPLVMKQ-CHPDTKKFLCSLFAPVCLDDL--D 4 FRIZ_DROME/1-1 97.4% 37.5% RC--EPITISICKNIP--YNMTIMPNLIGHTKQE--EAGLE---VHQFAPLVKIG-CSDDLQLFLCSLYVPVCTILE--- 5 Q14332/1-118 98.3% 35.0% FC--QPISIPLCTDIA--YNQTIMPNLLGHTNQE--DAGLE---VHQFYPLVKVQ-CSPELRFFLCSMYAPVCTVLE--- 6 O16147/1-115 98.3% 36.8% KC--EHITIPMCKNLD--YNQTVFPNLLGHTTQS--EAGPA---IAQFNPLIKVK-CSEDIRLFLCTVYAPVCTVLE--- 7 Q13467/1-121 98.3% 28.5% VC--QEITVPMCRGIG--YNLTHMPNQFNHDTQD--EAGLE---VHQFWPLVEIQ-CSPDLRFFLCTMYTPICLPDY--H 8 Q99686/1-119 98.3% 30.6% AC--EPVRIPLCKSLP--WNMTKMPNHLHHSTQA--NAILA---IEQFEGLLGTH-CSPDLLFFLCAMYAPICTIDFQ-H 9 Q10662/1-120 98.3% 32.0% RC--QKVDHEMCNDLP--YNLTSFPNLVDEESWK--DASES---ILTYKPLLSVV-CSEQLKFFLCSVYFPMCNEKLA-- 10 Q61088/1-120 98.3% 34.4% RC--DPIRIAMCQNLG--YNVTKMPNLVGHELQT--DAELQ---LTTFTPLIQYG-CSSQLQFFLCSVYVPMCTEKI--N 11 O00144/1-120 98.3% 32.8% PC--QAVEIPMCRGIG--YNLTRMPNLLGHTSQG--EAAAE---LAEFAPLVQYG-CHSHLRFFLCSLYAPMCTDQVS-- 12 Q61086/1-112 95.7% 32.5% SC--EPITLRMCQDLP--YNTTFMPNLLNHYDQQ--TAALA---MEPFHPMVNLD-CSRDFRPFLCALYAPICMEYG--- 13 Q61089/1-112 95.7% 29.9% TC--EPITVPRCMKMT--YNMTFFPNLMGHYDQG--IAAVE---MGHFLHLANLE-CSPNIEMFLCQAFIPTCTEQI--- 14 Q94132/1-117 98.3% 31.1% KC--IPIDIELCKDLP--YNYTYFPNTILHNDQH--TLQTH---TEHFKPLMKTK-CHPHIHFFICSVFAPMCPIGMP-- 15 O00520/1-121 98.3% 26.0% TC--VDLQLRTCSDAA--YNHTTFPNLLQHRSWEVVEASSEYILLSVLHQLLEGQ-CNPDLRLLGCAVLAPRCEGGW--- 16 Q62001/1-116 96.5% 31.7% RCLPLPPTLTLCSRLG--IGHFWLPNHLHHTDSV--EVEAT---VQAWGRFLHTN-CHPFLAWFFCLLLAPSCGPGPP-- 17 Q99835/1-115 94.8% 25.6% PC--EPLRYNVCLGSVLPYGATSTLLAGDSDSQE--EAHGK---LVLWSGLRNAPRCWAVIQPLLCAVYMPKCENDR--- 18 P91682/1-120 95.7% 20.0% RCYPTSNATNTCFGSKLPYELSSLDLTDFHTEK---ELNDK---LNDYYALKHVPKCWAAIQPFLCAVFKPKCEKINGED consensus/100% .C.....th.hC.t....ht...h.....p.......h..t......h..hh.h..C...h..hhC.hhhP.C....... consensus/90% .C.....ph.hC.t....at.h.hs.hh.c.p....ph..t...h..a..hhth..C...ht.hhCthhhPhC....... consensus/80% .C...shph.hC.shs..Ys.hhhPNhhtHps.t..pst.p...httahsLhpht.CpsthphFLCshahPhC....... consensus/70% pC...slsl.hCpsls..YshThhPNhltHpspt..-st.p...htpahsLlpht.CpsplphFLCulasPhCh.t.... cov pid 81 . 1 . . . ] 135 1 O00546/1-115 100.0% 100.0% --IYPCRWLCEAVRDSCEPVMQFFGFYWPEMLKC--DKFPEG-----DVCIAMTP 2 O42397/1-116 100.0% 58.6% --IYPCRSLCEAVKRSCAPVMACYGYPWPEILNC--NKFPAD----HELCIAAVS 3 O14778/1-117 98.3% 53.8% ETIQPCHSRCVQVKDRCAPVMSAF--PWPDMLEC--DRFPQDN----DLCIPLAS 4 FRIZ_DROME/1-1 97.4% 37.5% RPIPPCRSLCESARV-CEKLMKTYNFNWPENLEC--SKFPVHGG--EDLCVAENT 5 Q14332/1-118 98.3% 35.0% QAIPPCRSICERARQGCEALMNKFGFQWPERLRC--EHFPRHGA--EQICVGQNH 6 O16147/1-115 98.3% 36.8% KPIQPCRELCLSAKNGCESLMKKFGFQWPDQLDC--NKFPVT-----DLCVGKNS 7 Q13467/1-121 98.3% 28.5% KPLPPCRSVCERAKAGCSPLMRQYGFAWPERMSC--DRLPVLGRDAEVLCMDYNR 8 Q99686/1-119 98.3% 30.6% EPIKPCKSVCERARQGCEPILIKYRHSWPENLAC--EELPVYDR---GVCISPEA 9 Q10662/1-120 98.3% 32.0% NPIGPCRPLCLSVQEKCLPVLESFGFKWPDVIRC--DKFPLENN-REKMCMKGPN 10 Q61088/1-120 98.3% 34.4% IPIGPCGGMCLSVKRRCEPVLREFGFAWPDTLNC--SKFPPQND-HNHMCMEGPG 11 O00144/1-120 98.3% 32.8% TPIPACRPMCEQARLRCAPIMEQFNFGWPDSLDC--ARLPTRND-PHALCMEAPE 12 Q61086/1-112 95.7% 32.5% RVTLPCRRLCQRAYSECSKLMEMFGVPWPEDMEC--SRFP--------DCDEPYP 13 Q61089/1-112 95.7% 29.9% HVVLPCRKLCEKIVSDCKKLMDTFGIRWPEELEC--NRLP--------HCDDTVP 14 Q94132/1-117 98.3% 31.1% QAVTSCKSVCEQVKADCFSILEEFGIGWPEPLNC--AQFPDP----PELCMKPTE 15 O00520/1-121 98.3% 26.0% -VRRPCRHICEGLREVCQPAFDAIDMAWPYFLDC--HRYFTRED---EGCYDPLE 16 Q62001/1-116 96.5% 31.7% PPLPPCRQFCEALEDECWNYLAGD--RLP--VVC--ASLPSQED---GYCVFIGP 17 Q99835/1-115 94.8% 25.6% -VELPSRTLCQATRGPCAIVE--RERGWPDFLRCTPDRFP-------EGCTNEVQ 18 P91682/1-120 95.7% 20.0% MVYLPSYEMCRITMEPCRILY--NTTFFPKFLRCNETLFP-------TKCTNGAR consensus/100% ....ssh.hC..h...C..h.......hP..h.C..t.h..........C..... consensus/90% ..h.sst.hC.th...C..hh......aP..htC..tphP........hC..... consensus/80% .sh.PC+thC.tspt.Ct.lht.hth.WP-.lpC..schP.......thCht.s. consensus/70% .sl.PCRplCpts+ptCtslhptashtWP-.LpC..s+aP.......thCht.st