cov pid 1 [ . . . . : . . . 80 1 D908356 100.0% 100.0% MYVLQSSLQ---WQAWHDTLTRLYNRGA--LFEKARP--LAKLCQTHQHP-FSVIQVDLDHFKAINDRFGHQAGDRVLSH 2 D90908115 98.9% 34.7% NIKLRERLE---NQSIRDPLTGLFNRR---YLEQFFL-QEIGRAKRYNHS-IGVIMGDIDHFKQFNDQLGHDAGDHVLKT 3 D907909 94.3% 15.9% QEKSRQHIE---QLIQFDPMTGLPNRN---NLHNYLD-DLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLE 4 D90905129 97.1% 34.1% RKASQNQLSY---QALHDTLTGLANRA---LLLQRLE-FAGHQIKNNPKSRFALLFIDLDHFKLINDSWGHSVGDALLIK 5 D90901 99.4% 31.3% LELANIELN---KLAHIDGLTRIPNRR---YFEQQFA-EEWQIFLGRGKS-LTVMMVDVDHFKLYNDHYGHSQGDICLAE 6 MLCB2052_39-55 96.6% 31.1% ERQASQYLA---HQAAHDTLTGLPNRT---SILARIDEQRYCGAPDQLL--TAVLFIDLDNFKGINDSLGHDVGDVVLQT 7 D907669 96.0% 27.1% ERRAQERLRI---LANTDSITGLPNRN---AMQDLID-HAINHADNNK---VGVVYLDLDNFKKVNDAYGHLFGDQLLRD 8 YPH5_THIVI 98.3% 17.0% SRWLQDRRT---LVNRRETAGGFLPRD---VFMRHLE-QITRAREAQGGV-HGLVIIDVDGSQGILNALGLTATEKLLRE 9 SYCSLRA62 97.1% 28.5% RKLAAEKLHY---NANHDSLTNLPNRS---MFLDRLG-HALQRNLRRRDLRFAVLFLDLDGFKIINDSLGHSCGDLLLQG 10 D908698 90.9% 15.4% SEWLNRRWH---LQALTDPLTLLPNFR---ALEQAP---EQEAG-------KSFCCLRIDNLEFMSRHYGLMMRVHCIRS 11 U0001512 96.6% 31.1% HHLSIERLT---YEATHDCLTGLANRR---FAEDQIT-KSLQHDERSRL--AAVLLLDLDDFKVINDSLGHDVGDAVLQT 12 D9090134 97.1% 28.1% EKQQAEALFH---QAHYDHLTGLPNRI---LAKDRLQ-QAIESALRQKHI-FGLMFLDLDNFKKVNDTLGHDAGDQLLVE 13 D9091243 97.7% 20.3% RKVIEQSIH---YQAFYDPLTDLPNRF---LFKQELG-KVLSNVQNQSSV-LGLVLLGFRELQSLNDLLGHSVADEVLKI 14 YHDA_ECOLI 97.1% 18.5% HSRLDTLIR---SYAAQDVKTGLNNRL---FFDNQLA-TLLEDQEKVGTH-GIVMMIRLPDFNMLSDTWGHSQVEEQFFT 15 D9091325 97.7% 29.1% LATINDQLY---YDSHHDSLTCLPNRRSLALFLENLH-QNVHGRNNSDDQAFALLMLDLNKFKSINDRFGHLFGDKVLQR 16 SYCSLRG64 99.4% 29.8% LQEVNIELE---RLTQIDGLTGVYNRR---FFDQALE-REWQIAFRETES-LTLVMLDIDYFKLYNDTLGHQAGDHCLRI 17 D9090517 98.3% 32.2% LIQELDELE---RVAMVDSLTRLWNRL---GIETLLK-REWEYATRKNSP-ISIVMIDFDNFKQINDQHGHLVGDEVLQG 18 YYBT_BACSU 94.3% 16.3% VESETVTLN---DRKFRVVIKRDERLL---YFFDVT--EQIQIEKLYENERTVLAYIFLDNYDDVTQGLDDQTRSTMNSQ 19 BSUB0016_38-57 93.7% 28.6% NSMLRDRLE---HLVKTDQLTELYSRA---YLDEKI---QYSMKIHQK---GVFILVDIDNFKNVNDTYGHQTGDEILIQ 20 D9090278 99.4% 34.8% LEQVNQRLK---HLAIYDELTQIPNRR---YFTSYLE-QEWRQCLRQKSP-ISLILCDVDYFKNYNDLYGHQMGDKCLQS 21 AJU67070_2-411 94.9% 29.2% ALEQFNSIQ---ESANRDYLTGLYNRR---YWFNEG--QKWFEEQQRLQSTLSLCVLDVDHFKQVNDHWGHAIGDQLLCH 22 BSAB1488_12-28 91.4% 15.4% MTRLQSEIK---SYVAVDRVTGFDNKQ---RMKLELS-EEIKRAERYGNS-FVFLLLHMHYFKEFKSLYGEKETDRLFQY 23 D9091729 99.4% 30.3% WRQKLGETA---ELLNLDSLTQVSNRR---HFDLHLA-QQWERAMDSQEA-IALILCDIDHFKQFNDFYGHLSGDDCLRR 24 SYCSLLE96- 97.1% 24.2% QQFVTRLIT---QQTAYDPLTQLPNWI---IFNRQLTLALLDALYEGKM--VGVLVIAMDRFKRINESFGHKTGDGLLQE 25 YHCK_BACSU 98.9% 37.9% AHLLFKQYK---FQAHFDFLTGVYNRR---KFEETTK-ALYQQAADTPHFQFALIYMDIDHFKTINDQYGHHEGDQVLKE 26 D909035 99.4% 30.9% LESVNQMLE---RLAKVDQLTQLANRR---QLELFLD-TEWSEAIREQYP-FSILLCDIDYFKNYNDHYGHQGGDDCLQQ 27 D908801 90.3% 10.6% QRAVVRRIQ---RLAYVDPVVHLPNVR---ALNRAL--RDAPW--------SALCYLRIPGMEMLVKNYGIMLRIQYKQK 28 D908226 97.1% 27.4% NIFQELQLSS--KLAVHDVLTNIYNRR---YFFNSV--ESLLSRPVVKD--FCVMLVDINQFKRINAQWGHRVGDKVLVS 29 U73935_9-506 98.9% 27.3% IQEQTKQLN---EQVFIDKLTNIPNRR---AFEQRL--ETYCQLLARQQIGFTLIIADVDHFKEYNDTLGHLAGDEALIK 30 D90900109 98.9% 33.3% LQAANQQLQ---LLANIDGLTHIANRR---RFDEYLA-QEWQRHCREQKP-LSLILVDIDYFKAYNDLYGHQKGDDCLQK 31 D908227 93.1% 28.2% HFRLYQNVS---RENISDAMTGLYNRK---ILTPELE-QRLQKLVQSGSS-VMFIAIDMDKLKQINDTLGHQEGDLAITL 32 D907732 95.4% 33.9% QKRLEEQLE---HAAHHDAMTGLLNRR---QFYHITEPGQMQHLAIAQD--YSLLLIDTDRFKHINDLYGHSKGDEVLCA 33 YHJK_ECOLI 94.9% 16.9% LQRHYEEQN---ENAMRFPVSDLPNKA---LLMEMLE-QVVARKQT-----TALMIITCETLRDTAGVLKEAQREILLLT 34 JC4349 97.1% 30.3% LQQDHAKLEV---ESTHDPLTDLYNRR---YLDTWF---SYQEETTNNKP-HLLAIIDVDYFKKINDQYGHEAGDEVLRA 35 D90914106 97.1% 31.7% RKQAEAQIEN---LAYYDPLTALPNRR---LLLDRAE-NALALAQRSKHF-GAIVLIDLDGFKTLNDARGHDSGDRLLQM 36 D908446 98.3% 33.5% SRKMLRQLS---YSASHDALTHLANRA---SFEKQLR-ILLQTVNSTHQR-HALVFIDLDRFKAVNDSAGHAAGDALLRE 37 D907952 97.1% 32.4% INSLMKQVA---LRADFDFLTQVYSRS---GLYEAL--KSPSLKQTQH---LTVMLLDIDYFKSINDNYGHECGDKVLSV 38 YREP_STRAM 93.1% 26.7% GSVLTRRLA----SARRDPLTGLHTRA---GWTARAE-HCIHRHPR-----AAVLLVDLDHFKTLNDTHGHAAGDAALIA 39 SYCSLLE71 99.4% 29.8% LERFNKKLS---QLIDIDGLTKIANRR---CFNVRIK-QEWRRLSRAQVP-ISLIMFDIDCFKNYNDRYGHPEGDLCLIR 40 C41872 94.9% 20.3% EFTVTIEKN---YAKELNPLTGLPGNI---LIEKTL--SDILNSNES----FCVLYLDLDNFKIYNDVYGFENGDKILKF 41 D9090221 99.4% 27.0% QSALFAQVH---YLANMDGLTGIANRR---YLDHFLE-QQWQKLAKHHQY-LSLILCDIDFFKQYNDTYGHLEGDECLKK 42 YNTC_AZOCA 91.4% 18.2% RITSRRALE---RLAFTDMHTGLSNRT---GLLRLC--TGRPTRP------SGAVVLMLRDLGVVKTSFGDDWAEPMIVE 43 BSUB0007_224-4 97.1% 27.9% QYKAEKEIH---RMAHYDSLTDLPNRR---HAISHLT-KVLNREHSLHYN-TVVFFLDLNRFKVINDALGHNVGDQLLQF 44 ECU7385710 97.1% 29.9% LAEHKRRLQV---MSTRDGMTGVYNRR---HWETMLR-NEFDNCRRHNRD-ATLLIIDIDHFKSINDTWGHDVGDEAIVA 45 D9079010 97.7% 32.6% LRELFEEVSR--HEVGMDVLTKLLNRR---FLPTIFK-REIAHANRTGTP-LSVLIIDVDKFKEINDTWGHNTGDEILRK 46 SYCSLLE96 99.4% 30.5% LETANIRLQ---QISSLDALTQVGNRY---LFDSTLE-REWQRLQRIREP-LALLLCDVDFFKGFNDNYGHPAGDRCLKK 47 SYCSLLLH 89.1% 16.5% ASRREEYQQ---LLKERDGTTGFYSLS---GWEKLL--ASEEIRCQKFGFPVSVIIVEVEAAEPKGE---EPINDLILQR 48 YHUH_STRGR 96.0% 24.2% QTERLEEVR---KLAFTDPLTGLANRR---AVDVRLD-EAMERHRVDATV-VSLVVCDLNGLKAVNDTHGHAVGDRLLER 49 D9090065 97.1% 24.2% RQGYSETLAN---QALYDPISKLPNRV---NLQKELS-LAIDAAAHHQHL-MGVMFIHLEILNRINQAYGFGFGDEVFMA 50 D9090066 97.7% 17.5% RQQAEDSLA---QHTFYDPMTGLPNHA---FFEEQLA-IALAKVQRDQSR-LAILFLNFYNYERMINAFGLGCGEILLKT 51 D9090067 97.7% 15.3% AGSNDETFH---EQSYLDTATDLPNQT---LFLEYLN-IALSNARRHHAQ-VGVLLCQINNWSDLKRKRGDAVANAFLQE 52 ECAE000204 98.3% 30.1% IFSALRVTK---NIAHRDPLTNIFNRN---YFFNEL---TVQSASAQKTP-YCVMIMDIDHFKKVNDTWGHPVGDQVIKT 53 AF034831_1-571 94.9% 23.6% KVRYEQRLL---QAANVDSLTGLANRA---AYNAHM--ERLTAADAPS---IGLLLIDVDRLKQVNDILGHATGDLLLKG 54 D9079612 96.6% 27.3% TDYKIYLLT---IRSNMDVLTGLPGRR---VLDESFD-HQLRNAEPLN---LYLMLLDIDRFKLVNDTYGHLIGDVVLRT 55 Y4LL_RHISN-559 97.1% 26.0% RLLAQKQIH---HMARHDALTGLPNRQ---FLREEF--ERLSDHIAPSTR-LAILCLDLDGFKAINDAYGRATGDLLLRH 56 Y07I_MYCTU 96.6% 29.4% RVAAEARLR---YLADHDDLTGLHNRR---ALLQHLD-QRLAPGQPGP---VAALFLDLDRLKAINDYLGHAAGDQFIHV 57 D908232 97.1% 27.5% LREANAALIA---QSYTDSLTGLPNRRA--IFENLTTLFSLARHLNHK---IMIAFIDLDNFKLINDRFGHNSGDLFLIQ 58 ECAE000185 89.1% 28.2% VKKLYSMYN----SAFLDDLTKAMGRK---SFDEDL--KALPEKG------GYLCLFDVDKFKNINDTFGHLLGDEVLMK 59 CCRPLED 98.9% 35.6% TDYLRNNLDHSLELAVTDQLTGLHNRR---YMTGQLD-SLVKRATLGGDP-VSALLIDIDFFKKINDTFGHDIGDEVLRE 60 ECAE00034611 96.0% 27.0% LQAKNAQLLR---TALHDPLTGLANRA---AFRSGI--NTLMNNSDARKT-SALLFLDGDNFKYINDTWGHATGDRVLIE consensus/100% ...................h...........h.....................hh.h.h...t.h.t............. consensus/90% .......ht.....s.hD.hTtl.sp.....h.t.h....h..........hshhhhphp.hp.hsp.hGh..s-.hl.. consensus/80% ...h.tplp.....s.hDslTtl.NRt...hh.p.h..tthtth.t.....hslhhhcl-th+.hN-thGa.hGD.hL.t consensus/70% hpthppplp.....uhhDsLTtl.NRp...hhpptl..pthppt.ptt...hsllhlDlDpFKtlNDthGHthGDthLpp cov pid 81 . 1 . . . . : . 160 1 D908356 100.0% 100.0% AAGLISSSLRA----QDVAGRVGGEEFCVILPGA------SLTEAAEVAERIRLKLNEKEMLIA-KSTTIRISASLG-VS 2 D90908115 98.9% 34.7% IGRILQSNIRG----SDIACRYGGEEMTIVLPQT------SLEDTLVKAESLRQAIASMEVEYK-GKELGTLTVSLG-VA 3 D907909 94.3% 15.9% VVNRFREKLKP----DQYLCRIEGTQFVLVSLEN------DVSNITQIADELRNVVSKPIMIDD---KPFPLTLSIG-IS 4 D90905129 97.1% 34.1% IAEKLQINLRE----TDLAVRLGGDEFVIFLESIT-----EIKQAIDVAERILIHLRLPVQIQA---KELFVKASIG-IV 5 D90901 99.4% 31.3% IAQILQCCIRQPG--SDFVARYGGEEFVLVLPEV------DQFGAIAIAQRIKTALQTRNISHHAVDLAGNVTCSIG-IA 6 MLCB2052_39-55 96.6% 31.1% AAQRLRAGLRS----RDVVGRFGGDEFVALILGK-----ITHTELSKVVDRMHAALSEPTYVADA---VLHLRASIG-VV 7 D907669 96.0% 27.1% VSLAILSCLEH----DQVLARPGGDEFLVLASNT------SQSALEAMASRILTRLRLPFRIGL---IEVYTSCSVG-IA 8 YPH5_THIVI 98.3% 17.0% LESLLSKTMTP----EESATRMDDFRYGLLAKRE------TLSKLEALASTLCQQLSGLKPQDR--DIKLEVSVSVG-VG 9 SYCSLRA62 97.1% 28.5% IAHRLRQCLRP----EDTLARLGGDEFTMLIENIT-----CPEDVIAVAQRIHQELQKPFNLNG---QEIFTNTSIG-IA 10 D908698 90.9% 15.4% ICRTLLPLMQE----NEKLYQLPGSELLLVLSGP------ETEGRLQHMVNILNSRQIHWNNTG-------LDMGYG-AA 11 U0001512 96.6% 31.1% VAQRLRSAVRP----DDVVARLGGDEFIVLLRGPL-----SDMNANDVAKRLHTTLSESLVVDQ---LTVPIGASVG-IL 12 D9090134 97.1% 28.1% VSERLQRALRQ----TDTVARLGGDEFLIILDQVS-----HSRKLMAIAQRLLRVMRQPVNLQG---LEFFVHGSIG-IT 13 D9091243 97.7% 20.3% ITERLSAHVRL----EDLLCRWRGDTFILLIQSC-----RNLDEIEVFVRRLLAVLKRPFFIAN---NPLYLQGYAG-IA 14 YHDA_ECOLI 97.1% 18.5% LTNLLSTFMMRYP--GALLARYHRSDFAALLPHR------TLKEAESIAGQLIKAVDTLPNNKM---LDRDDMIHIG-IC 15 D9091325 97.7% 29.1% VAEILLECVRD----GDQVARLSGDEFIIVLKSTK-----SGDDAKKCADRIHRLFSRPLTMEG---IQLLISTSIG-IV 16 SYCSLRG64 99.4% 29.8% VAAILQESVHRT---SDLVARYGGEEFALILPRT------DLSGAVIVAQRIKTLMDAKAISHPTSEIANYVTVSIG-IH 17 D9090517 98.3% 32.2% SARLIISVLRS----YDILGRWGGDEFMLILPGS------GREQTAVLLERIQATIAQNPVPTS--AGPMAISLSMGGVS 18 YYBT_BACSU 94.3% 16.3% VTSLLNAWAQE---YGIFLKRTSSERFIAVLNEH------ILTELENSKFSILDEVREKTSFDG-----VALTLSVG-VG 19 BSUB0016_38-57 93.7% 28.6% VASVIKSNIRK----HDVGARWGGEELAIYLPNV------PVAVGKRITERLVYAVRKNTKPEV--------TISCG-IS 20 D9090278 99.4% 34.8% VAKVIQNALKRP---SDVLARYGGEEFIVILPYT------DQSGAYTVGQRIHHCLAEAQISHADSPTSRYLTISLG-IG 21 AJU67070_2-411 94.9% 29.2% LTRQLTQFFPD-----AMIARFGGEEFALMVPHC------SVPVLLKRLEGLRQQLRQHPLSPDV---PLFVRASYG-VV 22 BSAB1488_12-28 91.4% 15.4% VGQQIRTSVRE----TDKKFRPSDERIGIVLTHT------PAEHMPAVLTKLKKQLDTYQLENGK-----YVSLTFH-VC 23 D9091729 99.4% 30.3% IAKTLSATLRNP---FDLFARYGGEEFGVILPQV------TSEAAQQIAKRMQASLTMLEIPHHHSPTSEFVTMSFG-IG 24 SYCSLLE96- 97.1% 24.2% VADRLNQKLSPLAAYSPLLSRWHGDGFTILLTQIS-----DNQEMIPLCERLLSTFQEPFFLQG---QPIYLTASMG-IS 25 YHCK_BACSU 98.9% 37.9% LGLRLKQTIRN----TDPAARIGGEEFAVLLPNC------SLDKAARIAERIRSTVSDAPIVLT-NGDELSVTISLG-AA 26 D909035 99.4% 30.9% VAKALTRVVHRP---KDLAARYGGEEFLIVLPNT------DLQGAIHIGEDIQAEITRLAIPHVQSAIADHVTLSIG-CA 27 D908801 90.3% 10.6% LSHWLSPLLEP----GEDVYQLSGNDLALRLNTE------SHQERITALDSHLKQFRFFWDGMP-------MQPQIG-VS 28 D908226 97.1% 27.4% IVDIIQQSIRP----DDILARLEGEVFGLLFTEL------NSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTISIGTVF 29 U73935_9-506 98.9% 27.3% VAQTLSQQFYR---AEDICARFGGEEFIMLFRDI------PDEPLQRKLDAMLHSFAELNLPHPNSSTANYVTVSLG-VC 30 D90900109 98.9% 33.3% VANTLVDIAKRI---TDLVARYGGEEFVIVLPNT------NRQDALAMAENMLQAIAALAIPHEGSSVSKYVTISIG-VS 31 D908227 93.1% 28.2% LAQAIKQSIRK----SDYAIRLGGDEFCIILVDS------TPQIAAQLPERIEKRLQHIAPQK-------EIGFSSG-IY 32 D907732 95.4% 33.9% LARTLESCARK----GDLVFRWGGEEFVLLLPRT------PLDTALSLAETIRVSVAKVSISGL-----PRFTVSIG-VA 33 YHJK_ECOLI 94.9% 16.9% LVEKLKSVLSP----RMILAQISGYDFAVIANGV-----QEPWHAITLGQQVLTIMSERLPIER---IQLRPHCSIG-VA 34 JC4349 97.1% 30.3% LSTILKQQLRP----EDLLMRWGGEEFVMIISTP-------EAHIKEVLERIRAQVEQTSFYWA--GQRVPVTVSIGAIA 35 D90914106 97.1% 31.7% VAKRLADSLRD----SDTVARLGGDEFIVLLPELAHDRELAARLGLGVGEKIRQALATPFTLEA---EQVQISGSIG-IT 36 D908446 98.3% 33.5% LASLMLSMLRS----SDVLARLGGDEFGLLLPDC------NVESARFIATRIISAVNDYHFIWE--GRVHRVGASAG-IT 37 D907952 97.1% 32.4% FARHIQKIVGD----KGLVARMGGEEFAVAVPSV------NPVDGLLMAEKIRKGVELQPFTWQ--QKTLYLTVSIG-VG 38 YREP_STRAM 93.1% 26.7% TAHRLSSWCGR----HGTAGRLGGDEFVTAIRDL------DAVDLDALTTALHQPTNYDGTALP-------LAASVG-VC 39 SYCSLLE71 99.4% 29.8% VAQAARKAASRP---ADLVARFGGEEFAVLLPET------DTKGAIMVAEKIIQAISQLAIAHEASPISGQITISLG-IG 40 C41872 94.9% 20.3% TANTIKDCLLELFTFKNFVGHIGGDDFICIIKAS-------LEECYKVSQLIIDRFDSGILKFF-NEIDSKNKYIVG-LD 41 D9090221 99.4% 27.0% VANLLKKVMRRG---TDLTARYGGEEFALVLPQT------NKQGCQNVVIHLQSVFKQAQIPHRSSIIQPYLTLSIG-SA 42 YNTC_AZOCA 91.4% 18.2% TANLLSRMLPQ----EACLGRTGESEFTVVTWQP--------GAAAELAETLIGRLRSAIESGG---RRFYLRVGLG-VV 43 BSUB0007_224-4 97.1% 27.9% AAKRLSSVVPD----NGFIARLGGDEFIIILTDA----NTGTGEADVLARKIIQKFKKPFKIQDH---TLVTSVSIG-IA 44 ECU7385710 97.1% 29.9% LTRQLQITLRG----SDVIGRFGGDEFAVIMSGT------PAESAITAMLRVHEGLNTLRLPNT---PQVTLRISVG-VA 45 D9079010 97.7% 32.6% VSQAFYDNVRS----SDYVFRYGGDEFIIVLTEA------SENETLRTAERIRSRVEKTKLKAA-NGEDIALSLSIGAAM 46 SYCSLLE96 99.4% 30.5% IADAMAKVAKRP---TDLVARYGGEEFAIILSET------SLEGAINVTEALQVEVANLAIPHT-VSGTGHVTLSIG-IA 47 SYCSLLLH 89.1% 16.5% AAKIIKTVCRQ----DDFCARIGEREFAILCIEC------HISQADFIRERLALGFEQGKI---------TADIGIG-ER 48 YHUH_STRGR 96.0% 24.2% FGSVLSLCGAM--LPEALAARLGGDEFCLLTAGP------PADAVVGVATELCDRAAVIELGDG----VACGVASTG-DP 49 D9090065 97.1% 24.2% FHGAISDCMRS----GDTVGQWDSNTLVIILAKI-----KSPQDSIRLAERILDRLKNPITVRE---REFIFNINIG-IS 50 D9090066 97.7% 17.5% VAKRLSQWTEK----RGLACRWQGKQFAILLKEP-----GDNQALTEMVKEMLAMLEESIDVAK---QKIHLKGKVG-IA 51 D9090067 97.7% 15.3% AGQKLKSNLRN----GDIVSRWDKDEFIFLVSKV-----QDTSSLLGIAQRLMKPVLAPVTAGG---RPFQPEITYG-VA 52 ECAE000204 98.3% 30.1% VVNIIGKSIRP----DDLLARVGGEEFGVLLTDI------DTERAKALAERIRENVERLTGDNPEYAIPQKVTISIG-AV 53 AF034831_1-571 94.9% 23.6% VASRLDERLGK----RGKVFRLGGDEFSVVLDAP-----ASVRRMGSLARHLIEYIGRPLQVAGS---TINPTITVG-GA 54 D9079612 96.6% 27.3% LATYLASWTRD----YETVYRYGGEEFIIIVKAA------NDEEACRAGVRICQLVDNHAITHS--EGHINITVTAG-VS 55 Y4LL_RHISN-559 97.1% 26.0% VTERLRNFLKQ----SDILCRLSGDEFVVLRVGI-----NSNAEARLLAQQLIDVIEAPYELAG---THVDLQVVVG-LA 56 Y07I_MYCTU 96.6% 29.4% FAQRIGDALVG----ESLIARLGGDEFVLIPASPM-----SADAAQPLAERLRDQLKDHVAIGG---EVLTRTVSIG-VA 57 D908232 97.1% 27.5% VGERLNTLQQN----GEVIGRLGGDEFLVVSLNN------ENADISSLRERIQQQIRGEYHLGD--VDLYYPGASLG-IV 58 ECAE000185 89.1% 28.2% VVKILKSQIPV---DKGKVYRFGGDEFAVIYTGG------TLEELLSILKEIVHFQVGSIN----------LSTSIG-VA 59 CCRPLED 98.9% 35.6% FALRLASNVRA----IDLPCRYGGEEFVVIMPDT------ALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIG-VS 60 ECAE00034611 96.0% 27.0% IAKRLAEFGGL----RHKAYRLGGDEFAMVLYDV-----QSESEVQQICSALTQIFNLPFDLHN--GHQTTMTLSIG-YA consensus/100% ....h...............p..t..h.hh.....................h........................t... consensus/90% hsphl.t.h......tthhhRhsupcahhlh.t.........tth..hhpph...ht...............thshG.hs consensus/80% hsphltp.ht.....tshhsRhuG--Fhllh.t.......s.tth..hspplht.hpt.............hphohG.ls consensus/70% luphlpphhpt....p-hlsRhGG-EFslllsps......s.pthhtlspclhptlpp.hh.tt.....h.lshSlG.ls cov pid 161 . . . 2 .] 211 1 D908356 100.0% 100.0% SS--------EETGDYDFEQLQSLADRRLYLAKQA--------GRNRVFAS 2 D90908115 98.9% 34.7% C---------YPNHGETMVNIIQAADRALYQAKAA--------GRNRVVMA 3 D907909 94.3% 15.9% Y-----------DLGKNRDYLLSTAHNAMDYIRKN--------GGNGWQFF 4 D90905129 97.1% 34.1% I---------GSIHYYEPERLIRDADIAMYQAKNN--------GRNQYAVF 5 D90901 99.4% 31.3% VA--------HSRFASSKETLLKQADQALYCAKQA--------GRNQYFLF 6 MLCB2052_39-55 96.6% 31.1% A--------IKGDDPRNIGQILRDADTAMYRAKLS--------GEGTSYYT 7 D907669 96.0% 27.1% LS---------PEHGSDSTAIIRHADTAMYTAKEG--------GRGQFCVF 8 YPH5_THIVI 98.3% 17.0% LF---------DPPADDAFAMVSRAEKAAAGAKSA--------GGNQAHVW 9 SYCSLRA62 97.1% 28.5% L---------NHPHYGHPQDVLRDADTAMYRAKAA--------GKGRYAIF 10 D908698 90.9% 15.4% WG----------RFDGNQETLQPLLGQLSWLAEQS--------CAHHHVLA 11 U0001512 96.6% 31.1% EV--------RPDDRRRAADILRDADSAMYAAKN----------KKQCAVT 12 D9090134 97.1% 28.1% V---------FPDDGFHADVLLRNADTAMYAAKLA--------GRNMFRFF 13 D9091243 97.7% 20.3% CY---------PNHGDNVEILLNRVGIALNEVKDI--------GSRQYCFY 14 YHDA_ECOLI 97.1% 18.5% AW----------RSGQDTEQVMEHAESATRNAGLQ--------GGNSWAIY 15 D9091325 97.7% 29.1% I---------SNYEQFDYDRLIDYADTAMYEAKRN--------GELFVVF- 16 SYCSLRG64 99.4% 29.8% CA--------VPRPGLSLASWVKCADDALYQAKKR--------GRNGYFVL 17 D9090517 98.3% 32.2% V---------FTNQGEALQYWVEQADNQLMKVKRL--------GKGNFQLA 18 YYBT_BACSU 94.3% 16.3% A------------SVSSLKELGDLAQSSLDLALGR--------GGDQVAIK 19 BSUB0016_38-57 93.7% 28.6% CW--------TTETKKSLKELVHEADEALYSAKRS--------GKNRLMIH 20 D9090278 99.4% 34.8% TT--------VPLLHYHPSDLIKIADQALYAAKAA--------GRNQTKLK 21 AJU67070_2-411 94.9% 29.2% S-----------VGRVSMDEALSEADRLLYQAKNT--------GRDKIVSQ 22 BSAB1488_12-28 91.4% 15.4% YL-------PYRNDIQTADQFLEELENEMMMNEL----------------- 23 D9091729 99.4% 30.3% RL--------YPQPGQLPLDLIAQADENLYKAKRQ--------GRNCIFGH 24 SYCSLLE96- 97.1% 24.2% TA---------PYDGETAESLLKFAEIALTRAKCQ--------GKNTYQFY 25 YHCK_BACSU 98.9% 37.9% HY---------PNNTEQPGSLPILADQMLYKAKET--------GRNRVCFS 26 D909035 99.4% 30.9% ST--------IPRLGSDWGKLVGAADQYLYEAKAQ--------GRNRLVSG 27 D908801 90.3% 10.6% YCY-----VR--SPVNHIYLLLGELNTVAELSIVT--------NAPENMQR 28 D908226 97.1% 27.4% ST----------GDTRNISLVMTEADKALREAKSE--------GGNKVIIH 29 U73935_9-506 98.9% 27.3% TVVAVDDFEFKSESHIIGSQAALIADKALYHAKAC--------GRNQLSKT 30 D90900109 98.9% 33.3% SI--------IPMPEDTIERIISEADQALYSAKSQ--------GRNRAIA- 31 D908227 93.1% 28.2% AM----------KENDTLHDAYKASDERLYVNKQN---------KNSRS-- 32 D907732 95.4% 33.9% HH----------EGNESIDELFKRVDDALYRAKND--------GRNRVLAA 33 YHJK_ECOLI 94.9% 16.9% MF----------YGDLTAEQLYSRAISAAFTARHK--------GKNQIQFF 34 JC4349 97.1% 30.3% EK-------SVSKLALSWQSAMESADQALYQAKSE--------GRNRFIVN 35 D90914106 97.1% 31.7% L---------FPKLNEKVSDLFKEADTAMYQAKKA--------GRDKVCLF 36 D908446 98.3% 33.5% LI---------DDNNHQAAEVMSQADIACYASKNG--------GRGRVTVY 37 D907952 97.1% 32.4% SGR-----ASYLTLTDDFNKLMVEADTCLYRSKKD--------GRNRTSTM 38 YREP_STRAM 93.1% 26.7% RV--------AELPVPALTDALAAADAAMYAAKGR--------SRRGSRPA 39 SYCSLLE71 99.4% 29.8% TQ--------FPSKELISRTLIKQADMALYEAKRR--------GRNQYVVW 40 C41872 94.9% 20.3% RK-----------GVEDKFNLTSISIAGVYGNIAEFN------TSVNLALY 41 D9090221 99.4% 27.0% TM--------VPLPNVPPKQLIDWADQALFKAKKA--------GRNCHFSF 42 YNTC_AZOCA 91.4% 18.2% E------------RPGDATYLLRDAEMAARDCRDG--------HLLHFAEH 43 BSUB0007_224-4 97.1% 27.9% IS---------PKDGTDGLELMKKADMAMYAAKER--------NKSKYRYY 44 ECU7385710 97.1% 29.9% PL---------NPQMSHYREWLKSADLALYKAKKA--------GRNRTEVA 45 D9079010 97.7% 32.6% F-----------NGHPDYERLIQIADEALYIAKRR--------GRNRVELW 46 SYCSLLE96 99.4% 30.5% VY--------TPERHINPNALVKAADLALYEAKAK--------GRNQWLAY 47 SYCSLLLH 89.1% 16.5% ------------SPEKGLLDAMETAKSAAHEQKKF---------RVKTEG- 48 YHUH_STRGR 96.0% 24.2% -----------IGPVRSARRLFRLADAAQYRAKAARAPGPVVAGRDGEVVR 49 D9090065 97.1% 24.2% AY---------PNDGNRAEDLLSRANAALQKLRQT--------GFNHYQCY 50 D9090066 97.7% 17.5% VY---------PDGGTDGATLLKNSHTALEQIKEK--------HFDSFAFF 51 D9090067 97.7% 15.3% LY---------PVDGEQVNDLIGHIRENLQQLLPQ--------PTNPGSGE 52 ECAE000204 98.3% 30.1% VT---------QENALNPNEIYRLADNALYEAKET--------GRNKVVVR 53 AF034831_1-571 94.9% 23.6% I----------SEGMMDAATLSQNADFALYHAKET--------RRGSYVHY 54 D9079612 96.6% 27.3% RA----------FPEEPLDVVIGRADRAMYEGKQT--------GRNRCMFI 55 Y4LL_RHISN-559 97.1% 26.0% AA---------SKSDQSLDELIKTADIALERAKTG--------GGGTIVQY 56 Y07I_MYCTU 96.6% 29.4% SG---------TPGQHTPSDLLRRADQAALAAKHA--------GGDSVAIF 57 D908232 97.1% 27.5% EV---------DPETTDADSALHAADIAMYQEKKH--------KQKTPFVA 58 ECAE000185 89.1% 28.2% HS----------NECPTVERLKMLADERLYKSKKN--------GRAQISWQ 59 CCRPLED 98.9% 35.6% A---------TAGEGDTPEALLKRADEGVYQAKAS--------GRNAVVGK 60 ECAE00034611 96.0% 27.0% MT----------IEHASAEKLQELADHNMYQAKHQ---------RAEKLVR consensus/100% ....................h.............................. consensus/90% ................t...hht.up.th..sctt........tttth... consensus/80% ..............t.p.tplhp.A-tshhtuKtt........stsph.hh consensus/70% h............tttshpplhptADpAhapAKpt........Gcsphhhh