Family alignment for the H2A domain, displayed in

                     cov    pid  1 [        .         .         .         .         :         .         .         . 80 
 1 H2AV_DROME/1-1 100.0% 100.0%    AGKDSGKA-KAKAVSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDL-------    
 2 H2AV_TETTH/1-1 100.0%  75.2%    GGKVGGAKNKKTPQSRSYKAGLQFPVGRIHRFLKGRVSAKNRVGATAAVYAAAILEYLTAEVLELAGNASKDF-------    
 3 H2A2_TETTH/1-1  99.2%  59.8%    GGKAKGKTASSKQVSRSARAGLQFPVGRISRFLKNGRYSE-RIGTGAPVYLAAVLEYLAAEVLELAGNAAKDN-------    
 4 H2A_CHLRE/1-11  95.8%  59.5%    GKTSG-----KKAVSRSAKAGLQFPVGRIARYLKKGKYAE-RIGAGAPVYLAAVLEYLTAEVLELAGNAARDN-------    
 5 G685035/1-117   95.8%  50.8%    GKPKT-----TKSVSRSSKAGLQFPVGRIARYLKAGRYAQ-RVGSGSPVYLSAVLEYLAAEVLELAGIAARDN-------    
 6 H2A_EMENI/1-11  97.5%  53.7%    -SGGKASGSKNAQSRSS-KAGLAFPVGRVHRLLRKGNYAQ-RVGAGAPVYLAAVLEYLAAEILELAGNAARDN-------    
 7 P91898/1-118    96.7%  55.7%    GKG--GKVKGKVKSRSN-RAGLQFPVGRIHRLLRNGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDN-------    
 8 H2A2_XENLA/1-1  97.5%  43.4%    GKQG-GKTRAKSKTRSS-RAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEILELAWERLPEI-------    
 9 Q92646/1-115    94.2%  49.2%    -MQG-SKARAKAKTHSS-RAGLQFSVGRVHRLLRKGNYAK-RVRAGAPVYLEAVLEYLTAKILELAGNAARD--------    
10 P91960/1-119    97.5%  53.3%    GKGA-KAKSGKSVTRSS-RAGLQFPVGRIHRFLRKGQYAS-RIGGGAAVYLAAILEYLSAEILELAGNAARDN-------    
11 H2AM_RAT/1-118  96.7%  52.5%    SRG--GKKKSTK-TSRSAKAGVIFPVGRMLRYIKKGHPKY-RIGVGAPVYMAAVLEYLTAEILELAGNAARDN-------    
12 H2A_PLAFA/1-12  99.2%  55.7%    AKGKTGRKKASKGTSNSAKAGLQFPVGRIGRYLKKGKYAK-RVGAGAPVYLAAVLEYLCAEILELAGNAARDN-------    
13 Q42359/1-119    97.5%  39.3%    RKE--RRRSKEEGRDSVCAGRFAVSGWKNWPLLEERTVCS-ACWNGAPVYLAAVLEYLAAEVLELAGNAARDN-------    
14 H2A_EUGGR/1-12  98.3%  52.1%    GAKAGVKKGKTGGSGQSKKAGLTFPVGRTGSLLRAGRYAK-RVGKGAPVYLAAVLEYLSAELLELAGNASRDN-------    
15 H2A_LYCES/1-12  98.3%  54.1%    AGGRKGG-PRKKSVTKSIKAGLQFPVGRIGRYLKKGRYAQ-RVGSGAPIYLAAVLEYLAAEVLELAGNAARDN-------    
16 H2A_TRYCR/1-12  98.3%  43.2%    PRQAAKKASKKRSGGRSAKAGLIFPVGRVGSLLRRGQYAR-RIGASGAVYMAAVLEYLTAELLELSVKAASQQA------    
17 H2A1_LEIDO/1-1  96.7%  38.4%    PRSAKKAVRK--SGSKSAKCGLIFPVGRVGGMMRRGQYAR-RIGASGAVYLAAVLEYLTAELLELSVKAAAQSG------    
18 O02613/1-120    95.8%  40.0%    PSGAKEAAFQ--SGSKSAKAGLIFPVGRVGSMLRRGQYAR-RIGAAGAVYMTAVVEYLTAELLELSVKAAAQSG------    
19 Q23429/1-121    97.5%  46.0%    KTSSAKKKKK--RISRSTRSGLTFPVGRIHRKLRETTRGKQRISAGASVFMAATLEYLTTELMEMSAIAANES-------    
20 H2AL_HUMAN/1-1  86.7%  34.5%    RRGSSGAGGRGRTCSRTVRAELSFSVSQVERSLREGHYAQ-RLSRTAPVYLAAVIEYLTAKVPELAGNEAQNSG------    
21 H2AV_SCHPO/1-1  99.2%  68.6%    GKGGSK-IGERGQMSHSARAGLQFPVGRVRRFLKAKTQNNMRVGAKSAVYSAAVLEYLTAEVLELAGNAAKDL-------    
22 H2AV_YEAST/1-1 100.0%  66.1%    GKSGAKDSGSLRSQSSSARAGLQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDL-------    
23 GGH2AF_1/1-146 100.0%  38.4%    KAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEGPGVGRQRLQGPEGEAHHS    
   consensus/100%                  ..............tps.tsth.hss.p....hctt..t..th..tusla.tAhhEYLssch.thuh.t..t........    
   consensus/90%                   .tt......t....ppo.+uGL.FsVGRhtphL+ttp.sp.RlussusVY.sAllEYLsAElhELusptutp........    
   consensus/80%                   .ttt.tth.tttt.ppS.+AGLtFPVGRltphL+ptphup.RlGssusVYhAAlLEYLsAElLELuspAupp........    
   consensus/70%                   sttttttttttttsspS.+AGLpFPVGRltRhL+psphup.RlGuuAsVYhAAVLEYLsAElLELAGpAAp-........    

                     cov    pid 81          .         1         .         .         .         .     ] 146
 1 H2AV_DROME/1-1 100.0% 100.0%    --------KVKRITPRHLQLAIRG-----DEELDSLIKA----TIAGGGVIP-HIHKSLIGKKEET    
 2 H2AV_TETTH/1-1 100.0%  75.2%    --------KVRRITPRHLLLAIRG-----DEELDILIKA----TIAGGGVIP-HIHKALLGKHSTK    
 3 H2A2_TETTH/1-1  99.2%  59.8%    --------KKTRIVPRHILLAIRN-----DEELNKLMAN---TTIADGGVLP-NINPMLLPSKTKK    
 4 H2A_CHLRE/1-11  95.8%  59.5%    --------KKNRIVPRHIQLAIRN-----DEELGKLLGE---VTIASGGVLP-NIHAVLLPKKTKG    
 5 G685035/1-117   95.8%  50.8%    --------KKSRIIPRHIQLAVRN-----DEELSKLMGS---VTIASGGVLPKNSSKICCPRKTGK    
 6 H2A_EMENI/1-11  97.5%  53.7%    --------KKTRIIPRHLQLAIRN-----DEELNKLLGH---VTIAQGGVLP-NIHQNLLPKKTPK    
 7 P91898/1-118    96.7%  55.7%    --------KKTRIIPRHLQLAIRN-----DEELNKLPSG---VTIAQGGVLP-NIQAVLLPKKTEK    
 8 H2A2_XENLA/1-1  97.5%  43.4%    --------TKRPVLSPGTCNSLCN-----DEELNKLLGG---VTIAQGGVLP-NIQSVLLPKKTES    
 9 Q92646/1-115    94.2%  49.2%    --------KKTRVTPRRLQLAIH------DEKLNKLLGK---VTIAQGGVLP-NIQAVLLPCLYK-    
10 P91960/1-119    97.5%  53.3%    --------KKSRIIPRHLQLAVRN-----DEELNKLLNN---VTIASGGVMP-NIQTVLLPKKSGK    
11 H2AM_RAT/1-118  96.7%  52.5%    --------KKGRVTPRHILLAVAN-----DEELNQLLKG---VTIASGGVLP-NIHPELLAKKRGS    
12 H2A_PLAFA/1-12  99.2%  55.7%    --------KKSRITPRHIQLAVRN-----DEELNKFLAG---VTFASGGVLP-NIHNVLLPKKSQL    
13 Q42359/1-119    97.5%  39.3%    --------KKTRIIPRHVLLAVRN-----DEELGKLLAG---VTFAHGGVLP-NINPVLLPKKTAE    
14 H2A_EUGGR/1-12  98.3%  52.1%    --------KKKRITPRFLTLAVRN-----DEELNKLLSG---VTIASGGVLP-NIQQVLLKKKGK-    
15 H2A_LYCES/1-12  98.3%  54.1%    --------KKSRIIPRHVLLAVRN-----DEELGKLLAG---VTIASGGVLP-NINPVLLPKKSAV    
16 H2A_TRYCR/1-12  98.3%  43.2%    -------KKPKRLTPRTVTLAVAH-----DDDLGMLLKD---VTVSRGGVMPS-LNKALAKKHKSS    
17 H2A1_LEIDO/1-1  96.7%  38.4%    -------KKRCRLNPRTVMLAARH-----DDDIGTLLKN---VTLSHSGVVPN-ISKAMAKKKGGK    
18 O02613/1-120    95.8%  40.0%    -------KKPRRLSPRTVTMAVRH-----DD-IGSLLKN---VTMSRGGVVPS-INKALAKKKGGK    
19 Q23429/1-121    97.5%  46.0%    -------KKS-RVTPRHLHLAIYG-----DQETAQLLDK---VTLPQGGVTPMPIHPSLLPKKKAK    
20 H2AL_HUMAN/1-1  86.7%  34.5%    -------ERN--ITPLLLDMVVHN-----DRLLSTLFNT---TTISQ--VAPG--ED---------    
21 H2AV_SCHPO/1-1  99.2%  68.6%    --------KVKRITPRHLQLAIRG-----DEELDTLIRA----TIAGGGVLP-HINKQLLIRTKEK    
22 H2AV_YEAST/1-1 100.0%  66.1%    --------KVKRITPRHLQLAIRG-----DDELDSLIRA----TIASGGVLP-HINKALLLKVEKK    
23 GGH2AF_1/1-146 100.0%  38.4%    PPFAAGDPRRRRVGFPHQSHHSGGRRHPPHPQVSDREEGPAENRVEDGGSHPAPVGGPTRPNAAGL    
   consensus/100%                  ........p...l...h.....h......c..hs.h.tt....ph.t..shP...t..........    
   consensus/90%                   ........+.tRlhPhtl.hultt.....DcplspLhtt....ThutGGVhP..lp..hh.phtt.    
   consensus/80%                   ........KhpRlhPRpl.LAlps.....D--LspLhts...sTlupGGVhP..Ip..Lh.+ptt.    
   consensus/70%                   ........KppRlhPR+lpLAl+s.....D-ELspLlts...sTlApGGVlP.pIptsLl.K+ptt