cov pid 1 [ . . . ] 39 1 E1198294|E11982 100.0% 100.0% KEIDRAREIYERFVYVH-------PDVKNWIKFARFEES 2 P87312|P87312_5 100.0% 65.6% HENERARGIYERFVVVH-------PEVTNWLRWARFEEE 3 O16376|O16376/1 100.0% 63.6% KEIDRARSVYQRFLHVHG------INVQNWIKYAKFEER 4 E1198294|E119_1 100.0% 40.6% GETELARQLYERLLERT-------QHVKVWMSFAKFEMG 5 O16376|O16376_5 100.0% 34.4% EEHEKARDLYETLLQRT-------NHIKVWISMAEFEQT 6 P87312|P87312_6 100.0% 43.8% MEYGKARSIYQQLLRTA-------PHVKVWISFANFEIA 7 E1198294|E119_2 100.0% 33.3% GFIHGSRRVFERAVEFFG---DDYIEERLFIAFARFEEG 8 O16376|O16376_1 100.0% 27.8% GYIGNARAAYEKAMEYFG---EEDINETVLVAFALFEER 9 E1198294|E119_3 100.0% 30.3% DYQQRKRKTFEDNLRKNR------MVVSHWIKYAQWEEQ 10 O16376|O16376+1 100.0% 27.3% EYQRKKRKEFEDGIRKNR------MQLANWIKYGKWEES 11 Q12309|Q12309_6 100.0% 30.3% EYQRRKRTEYEGYLKRNR------LDMGQWIRYAQFEIE 12 Q24539|Q24539_1 100.0% 24.2% RPIHEVRSLYESLVNVFP------TTARYWKLYIEMEMR 13 Q19866|Q19866_1 100.0% 24.2% RPIDQERDFYESLVKQFP------NSGRYWKAYIEHELR 14 Q12996|Q12996_1 100.0% 30.3% QPIDKARKTYERLVAQFP------SSGRFWKLYIEAEIK 15 O64496|O64496_3 100.0% 27.3% DNIAKIRKVYDAFLAEFP------LCYGYWKKFADHEAR 16 O74970|O74970/1 100.0% 30.3% QAINTLRSVYDRFLGKYP------LLFGYWKKYADFEFF 17 Q12381|Q12381/1 100.0% 27.3% EQIELARDAYLAGTKVCP------YSIPLWLLLAKLEEK 18 D1037925|D10379 100.0% 24.2% EMMEKAREAYNQGLKKCP------HSTPLWLLLSRLEEK 19 Q12381|Q12381_1 100.0% 18.2% QSVIRARVVFDRAKVKNP------KNEFLWLELIKMELR 20 D1037925|D103_1 100.0% 24.2% GQLTRARAILEKSRLKNP------KNPGLWLESVRLEYR 21 O74835|O74835/1 100.0% 18.2% GDPERGRTIFEGLLSSYP------KRLDLWNVLIDMEMK 22 Q18038|Q18038_2 100.0% 21.2% GDAERGRTLLEGLVTAHP------KKTDLWLVYAEAVLK 23 G4092534|G40925 100.0% 20.6% QKITAVRRVYQKAVVTPI-----VGIEQLWKDYIAFEQN 24 Q12996|Q12996/1 100.0% 20.6% QRITAVRRVYQRGCVNPM-----INIEQLWRDYNKYEEG 25 O14233|O14233/1 100.0% 29.4% QKLDHVRRIYQRAITTPI-----HNIEKLWRDYDAFENS 26 Q19866|Q19866/1 100.0% 17.6% QRITAVRKIYQKALATPM-----HNLELIWNDYCTYEKA 27 O16376|O16376_2 100.0% 11.4% TDREEVEDVYERAIANIP----PHSEKRYWRRYIYLWIN 28 E1198294|E119_4 100.0% 20.0% GDRDQIRETYERAISNVP----PANEKNFWRRYIYLWIN 29 P87312|P87312_2 100.0% 17.1% GDINTIRETYEKAIAKVP----EVVEKNAWRRYVYIWLN 30 O74970|O74970_3 100.0% 21.2% GDFQRICHLYERCLITCA------LYDEFWFRYARWMSA 31 Q22961|Q22961_3 100.0% 21.2% GHEERVKILFDRCLIPCS------LYEEFWIKYARWTWK 32 O64496|O64496_2 100.0% 21.2% GDFNKVVKLYERCVVTCA------NYPEYWIRYVTNMEA 33 Q24539|Q24539_4 100.0% 15.2% GLNRNLPAVPPTLTKEEV------KQVELWKRFITYEKS 34 Q19866|Q19866_4 100.0% 12.1% GLNRQAVSVPPKGTATEF------KQVELWKNLIAWEKT 35 Q12996|Q12996_3 100.0% 18.2% GLDRNAPSVPPQNTPQEA------QQVDMWKKYIQWEKS 36 G4092534|G409_1 100.0% 15.2% NTRVLFERVLSSGGLSPH------KSVEVWNRFLEFESN 37 Q19866|Q19866_6 100.0% 15.2% NTRVVFERILTSSKLPAD------KSIRIWDRFLDFESC 38 E1198294|E119_5 100.0% 39.4% QEIQRARSIWERALDNEH------RNVTLWLKYAEMEMK 39 O16376|O16376+2 100.0% 33.3% GEIQRARSVFERALDVDH------RSISIWLQYAEMEMR 40 P87312|P87312/1 100.0% 33.3% KEFARARSVFERALDVDS------TYIPLWLKYIECEMK 41 Q12309|Q12309/1 100.0% 30.3% HDMRRARSIFERALLVDS------SFIPLWIRYIDAELK 42 E1198294|E119_6 100.0% 25.7% KEHDRARIIYKYALDHLP----KDRTQELFKAYTKHEKK 43 P87312|P87312_1 100.0% 22.9% KEYERARTIFKYAIDFMP----RSKSMELYKEYTHFEKQ 44 P87312|P87312_4 100.0% 30.3% RNINHARNLFDRAVTQLP------RVDKLWYKYVYMEEM 45 O16376|O16376_6 100.0% 27.3% KQINHARNVFDRAITIMP------RAMQFWLKYSYMEEV 46 O64496|O64496_1 100.0% 16.7% GDPETIRRLFERALVYVG---TDFLSSPLWDKYIEYEYM 47 O74970|O74970_2 100.0% 19.4% GDANEVRELFMQGANMVG---LDFLSHPFWDKYLEFEER 48 G4092534|G409_2 96.9% 12.1% RYYERVEKLFQR-CLVKI------LNIDLWKLYLTYVKE 49 Q19866|Q19866_2 96.9% 12.1% KNFENVEKLFSR-CLVSV------LNIDLWKCYIHYVFE 50 O14233|O14233_2 96.9% 12.1% NDFHAVELLFSR-CLVKV------LSVDLWTLYLSYIRR 51 G4092534|G409_3 100.0% 8.3% THKEKMAQAYDFALEKIG---MDLHSFSIWQDYIYFLRG 52 Q19866|Q19866_3 100.0% 5.6% QYREEMAKAYDFALEKVG---MDVQAYSIFTEYIAFLKK 53 Q12309|Q12309_1 100.0% 39.4% KEFDRVRKIYEKFIEFQP------SDLQIWSQYGELEEN 54 O16376|O16376_7 100.0% 39.4% REFDRCRKLYEKFLESSP------ESSQTWIKFAELETL 55 O16376|O16376_4 100.0% 35.1% KDFDRARQVYKACIDIIP--HKTFTFAKVWIMFAHFEIR 56 P87312|P87312_3 100.0% 29.7% KDVDRARKVYQEALKLIP--HKKFTFAKLWLMYAMFELR 57 E1198294|E119_7 100.0% 24.3% EDAERTRQIYKTCLELIP--HKQFTFSKLWLLYAQFEIR 58 P87312|P87312_9 96.9% 24.2% GNITGCRQVFERWLKWEP-------DENCWMSYIRMERR 59 O16376|O16376_9 96.9% 27.3% ENIPGARQIFERWIEWEP-------PEQAWQTYINFELR 60 Q12996|Q12996_2 100.0% 14.7% MKYEKVHSIYNRLLAIED-----IDPTLVYIQYMKFARR 61 Q19866|Q19866_5 100.0% 17.6% KQFEAVKNIYDRLLGIEH-----INPTLTYVQLMRFIRR 62 P25298|RN14_YEA 100.0% 11.4% DEFETVEKILAQCLSGKL----ENNDLSLWSTYLDYIRR 63 E1198294|E119_8 100.0% 28.6% GDTDRARAIFELAVQQPR----LDMPELLWKAYIDFEVA 64 P91175|P91175_3 100.0% 21.6% GDLDAARKTFETAVISQF--GGVSELANVWCAYAEMEMK 65 P25298|RN14_Y+1 100.0% 26.5% QRIDMLREFYKKMLCVPF-----DNLEKMWNRYTQWEQE 66 Q22961|Q22961_1 100.0% 30.3% DDVDFAREKYRSFLSRYP------NCYGFWQKYAEYEKK 67 P91175|P91175_1 100.0% 22.9% KKLERARDLFEQCLENCP----PTHAKYIFLLYAKLEEE 68 P91175|P91175_8 100.0% 37.1% GEIDRARAIYAHAAEISD----PKVHVKFWDTWKNFEVA 69 P87312|P87312_7 100.0% 19.4% GNAANVRQVYLAAIDALG---QEFLNERFFIAFAKFEIR 70 Q12381|Q12381_5 96.9% 15.6% GTTESVCSILEKAVESCP------KAEILWLLYAKERK- 71 Q12309|Q12309_5 100.0% 15.8% ENSLLEEELFQRLIDDII-PHKHFTFSKIWLMYAKFLIR 72 O14233|O14233_3 100.0% 16.7% QSRSTITQAYEFVINTIG---VDILSGPIWSEFVDFLRS 73 Q15020|Q15020/1 100.0% 16.2% GGLEKVRSVFERALSSVG--LHMTKGLALWEAYREFESA 74 O64496|O64496/1 100.0% 27.3% GAMDKVVEVYERAVLGVT------YSVDIWLHYCTFAIN 75 P91175|P91175/1 100.0% 17.1% GLITETRRVFDRALRSLP----VTQHMRIWTLYIGFLTS 76 P91175|P91175_2 100.0% 27.8% AEFERARDVYEEAIAKVS---TVRDFAQVYDAYAAFEER 77 Q12309|Q12309_2 100.0% 30.3% QEFEKARKLYRRYLELNQ------YSPQSWIEFAMYQTS 78 P91175|P91175_6 100.0% 15.2% GTVESCRKVYDKMIELRV------ASPQMIMNYAMFLEE 79 Q18038|Q18038_1 100.0% 19.4% LGIEHARKVLERACNLGF---SIHKMRPLYKKWLEMESK 80 P87312|P87312+1 96.9% 24.2% RKIDVARKTLGRALGMCP-------KPKLFRGYIEFEDA 81 Q17430|Q17430/1 100.0% 11.8% GDKENARKYLNKALNSVS-----DNINEIYMYYVQFERE 82 Q22961|Q22961_4 100.0% 6.1% RDPKLAQKVLKKAISIDP------FNLQLYSQYVDIAYS 83 P87312|P87312_8 100.0% 27.3% TVLDKRRLQYEKLLKDSP------YDYDTWLDLLKLEES 84 Q02354|YD49_YEA 100.0% 24.2% TSYKKIHNIYNQLLKLHP------TNVDIWISCAKYEYE 85 Q15020|Q15020_4 100.0% 18.2% KVKDLVLSVHNRAIRNCP------WTVALWSRYLLAMER 86 Q17430|Q17430_3 100.0% 20.6% KLPQVAVKVYSRALRHCP-----YSFVLHQQALLAFERD 87 Q12381|Q12381_2 100.0% 30.3% EEVDNARILLARAVELIP------MSIDLWLALARLETY 88 D1037925|D103_2 100.0% 24.2% ETYENARKVLNKARENIP------TDRHIWITAAKLEEA 89 D1037925|D103_3 100.0% 15.2% TDIRAKKRVLRKALEHVP------NSVRLWKAAVELEEP 90 Q12381|Q12381_4 100.0% 24.2% GDIRKARKLLQSVIETNP------KHASGWVAAARLEEV 91 D1037925|D103_4 100.0% 27.3% NALECARAIYAYALQVFP------SKKSVWLRAAYFEKN 92 Q12381|Q12381_3 100.0% 12.1% GNISQVRAALAKALQECP------SSGLLWTEAIWLEPR 93 O14233|O14233_4 100.0% 14.3% NDETNARALFEKAIPRIA----ADEAKPIYQKWLDYESN 94 P25298|RN14_Y+2 100.0% 11.1% NKDSQIKTLFETSVEKVQ---DLTQLKEIYKKMISYESK 95 Q02354|YD49_Y+1 100.0% 18.2% ANFKSCRNIFQNGLRFNP------DVPKLWYEYVKFELN 96 P25298|RN14_Y+3 100.0% 21.2% ESYAKVREVYEQFHNTFP------FYSPAWTLQLKGELA 97 Q22961|Q22961_2 100.0% 16.7% FPPESLRDLYARAIEIAG---LEYQSDRLWLEAIGFERA 98 Q15020|Q15020_5 100.0% 14.7% NNMQKARELWDSIMTRGN-----AKYANMWLEYYNLERA 99 O14233|O14233_1 100.0% 18.2% GKHEELRETYEQMLRPFP------YVPRVWVDYISSELA 100 O74835|O74835_1 100.0% 21.2% GKVDLADEYMQLMLKNFK------QVPSVWIQYATFLLN 101 O18352|O18352/1 100.0% 21.2% LKNAVIRFIFERSVAKFP------IVDVLWLSYIEFIQF 102 Q18038|Q18038/1 100.0% 17.6% EKNAEATQILEQMVKKFR-----ANQLEVWTLLAEHLMT 103 Q15020|Q15020_1 100.0% 18.2% GDPARIQLIFERALVENC------LVPDLWIRYSQYLDR 104 Q15020|Q15020_2 100.0% 8.1% VDHQVISVTFEKALNAGF--IQATDYVEIWQAYLDYLRR 105 Q15020|Q15020_3 100.0% 9.4% LDREHVYDLFEKAVKDY-------ICPNIWLEYGQYSVG 106 P91175|P91175_7 90.6% 15.6% GDYENMQSVQARVHRS----------PILWAMYADYEEC 107 P91175|P91175_5 100.0% 27.3% SPAKQMFLIYERALAVFE------RSYKLWYHYLKYRES 108 Q02354|YD49_Y+2 100.0% 21.2% SIQQRIGFIYQRGTNKFP------QDLKFWAMYLNYMKA 109 G4092534|G409_4 100.0% 12.1% KDKEIAFRIFELGLKRFG------GSPEYVMCYIDYLSH 110 Q17430|Q17430_1 100.0% 13.5% EDFKFCRDVCSKALENLG--TRYDSGGHIWLIFLEYEMS 111 Q12309|Q12309_4 96.9% 21.2% NNVEIVRSLYTKWCSLEP-------GVNAWNSFVDFEIR 112 Q12309|Q12309_3 100.0% 40.6% KNWNGVREIYSKYVMAH-------PQMQTWLKWVRFENR 113 O74970|O74970_1 100.0% 21.2% AGAEASEHIYERGIAGIP------HSVDLWTNYCAFKME 114 P91175|P91175_9 100.0% 11.4% EYFELAFQAYEKGIALFK----WPGVFDIWNTYLVKFIK 115 Q22961|Q22961/1 100.0% 12.1% GNIAEAKAVWEKGIISIP------LSIDLWLGYTADVKN 116 O74970|O74970_4 100.0% 27.3% GDIELARNMFLQNAPALL------DCRHFWISFLRFELE 117 O18352|O18352_1 100.0% 22.9% GSPDNGREIWRQIMGYPG----SSIRGLLWLNFAQMESE 118 Q17430|Q17430_2 100.0% 8.1% RPNEEIDALWERARSNVI--NSAEEGRSLYRTYAFLLRR 119 O18352|O18352_2 100.0% 15.2% EVDEEIRLILQRIVTDMD------MTVELHLDYLAYRIR 120 P91175|P91175_4 100.0% 15.2% NSWRALCDTYERCLMRLH------KMPRIWICYCEVMIK 121 Q19866|Q19866_7 100.0% 18.2% QHARRVVYTYEQSLLCLG------YYPDIWYEAAMFLQE 122 O64496|O64496_4 100.0% 17.6% QDWSRVALIYTRILENPI-----QNLDRYFSSFKELAET consensus/100% .............h......................... consensus/90% t..t.ht.hhtthh..............ha..hh.h..t consensus/80% tthpthpthapphh.............thWhtahth..t consensus/70% tphpps+plapphlt............phWhtahphp.p