cov pid 1 [ . . . . : . . . 80 1 18160453/9-120 100.0% 100.0% LRQAERDLIKAENDL-KTGDWDSAAFWSQQCAEKALKALL-LNAGKAYRG-HELLELA------RVIKEEIGV------D 2 Q97XB1/9-118 95.5% 33.0% LRQAERNLKSAELNF-ENGIYEETCYEAQQVAEKSVKSLL-SYFHKEMRG-HSITFLL------QFSSISIP-------- 3 SACS_MOUSE/370 99.1% 19.5% LRQARANFSAARNDL-HKNANEWVCFKCYLSTKLALIAAD-YAVRGKSDKDVKPTALA------QKIEEYSQQL----EG 4 Q9YCI5/15-127 97.3% 33.6% LRQAKHTLESIRVDY-EGGFYSWACFKANQAAEYSIKAVL-RAAGLESFG-HDLMALW------RRARSLCQPL------ 5 AAK88591/225-3 98.2% 20.3% LPDARDFADVAKYLV-AKGNLHLAAFNLHQAVETAYNCYL-LTLTNYSPASHNLKFLR-----GLSEGRDRRLIDIWPRD 6 Q92ZG2/148-268 98.2% 19.5% LPHAKTFVEGTQFFV-SRGRRKEAAFLLHQSIEQTYAALL-LVLTSYSPASHNLRHLR-----SLAEERDQRLAEVWPRD 7 Q92VW9/195-315 98.2% 17.1% FPSAPSFLDTAQYLV-RKNQLRHSAFELHQSIETAYSCLL-LTLTNYSPPSHSLKFLR-----GLAEDHDRRLVEVWPRD 8 AAK88587/185-3 98.2% 17.1% FEAGTEFFVLSCHAR-NSGFTKRAAFLLHQAIEQAYSCVL-LTLTNYGPASHNIKFLR-----SLAEEQDLRLVDAFPRD 9 AAK90491/172-2 98.2% 17.1% FGAGRNFAALSDAAL-QKGMISEAAFLLHQAIEQAYASVL-LTLTNYTPASHNLKVLR-----SFAEERDRRLIEAFPRD 10 Q96XM5/11-118 92.9% 26.7% FKSAKLTLESAKHDV-SGGFYNWACFKSQQAAEFAVKAYF-YGIGQPKTG-HTISSLL------NLLN----AP------ 11 18159896/9-122 97.3% 34.2% FREGIRDCKTAELLF-NAGVYHSSAFYSHQAAEKVLKSLFYVFARREPPKRHNLLELY------RELKQHGA------EL 12 Q97VT0/10-121 99.1% 51.3% FRQALEDLATAKDTI-TTGHYYASAFWAEQAAEKALKALL-IENGKIERT-HDLNQLL------YVIKEEIGLP------ 13 18160957/6-115 96.4% 27.2% YSRAGRFRALASEFL-RRGFYPEACFFAQQSAEFYLKGKL-IEVTGARLYTHSILQLL------TVLYQTLGR-----EL 14 Q974A5/25-132 94.6% 32.5% FEKSKEFLELAKKHL-DDGYFWFSCFASQQSVEFALKGLL-VKYKGMFPFTHDLGELA------EKVGKELGV-----NV 15 Q972P8/5-114 94.6% 16.4% FEKSDKDKEVAYLLL-DKGYYPEACFHAVMAVELRLKGVL-VQTTGGIIYTHSIKRLL------DEVAKIKNL-----QL 16 Q9UZ01/10-121 93.8% 24.4% FHRSKDYMSLANVAF-KEGKFDVAIFLAGQSLQLYLKATL-VKYADLRLRTHSIRELL------INIGKVFEMEEKVVEF 17 Q97WD3/46-157 94.6% 19.5% FQRANELLRASKFNF-NSGFYEIAAIAAVESLYLLLNATL-IRIGADIPWYLDFDGLF------RVISRYSND-DRIAEI 18 O58422/9-118 93.8% 32.5% WEQALEDLKTAEVLI-EVKRYYASVFFSQQAAEKALKALYIEVKREFPPKTHSLLRLS------NELG--IKD------- 19 Q96ZS6/11-121 92.9% 19.3% CRRALSYLKVAKDVF-HEGLYDVAATNCQISAELLIKSTY-LFLGFVYPETHNIRKLL------SELANLTKL-EEIGRL 20 Q975T4/9-119 92.9% 19.3% CKRSLEYLKASEEAF-INGLYNASGLMSQISAELAIKATI-AFLGYSFPETHEIRKLL------SVLSTLILK-DEISEF 21 O58139/13-126 98.2% 34.5% IVEAKRTLSSAYSDL-KEGYYEWASFKAQQAAELAVKAIL-RGLGFAPIG-HSITRLL------KDLSGSLNL-----DI 22 Q97XN9/7-119 95.5% 37.3% MIQAEEDLDVARVLL-EAGKYFAVTFYSQQAVEKALKSLL-IHLGKDPGKTHSLTELA-----SMIENEGLKIP------ 23 Q974G3/8-113 91.1% 36.2% IKQAERDLEEARYAK-SGGYYELACFLSQQCAEKAVKGLL-QFQGIEKRG-HSISHLL------------TNPP------ 24 Q9WZ82/1-112 96.4% 27.6% MDAAKDDLEHAKHDL-EHGFYNWACFSSQQAAEKAVKAVF-QRMGAQAWG-YSVPDFL------GELSSRFEIP------ 25 18159071/10-12 97.3% 35.0% LEEAEDDFNAAADLA-RLGRYAKACFLSQQAAEKALKALL-IAKAGRYERTHSVYALL------LAAEKYGIPI------ 26 Q58700/15-135 99.1% 28.7% IKRAEEDLEVAKVLL-KTNHYPDSVYHSQQCVEKAVKAVL-I-LNGIIFRRHVVSGVF-----RNVIYEMKIE-DSWKEK 27 18161127/14-12 96.4% 32.8% ITMAERTLSSARLDA-SHGEYNWACFKAHQAAEFALKALL-YGVGRPARG-HSLTHLL------GEVAKFATVS------ 28 Q972J0/11-121 93.8% 22.9% LRRAEKFRKDAINAY-NEGYYDISCFYAEQAVQLRIKAYM-LRNLGFIPRIHGIRDLL------SIIYKYTRD-KKIMEF 29 18160011/5-114 96.4% 29.8% LEKASRYREYAKRNF-ESGAYDLACFLAQQSAEFLLKALL-IRETGARPLTHSLYEMA------RRLATLKNF-----EL 30 18159235/9-122 98.2% 33.6% IREAWADLCSAKVLY-GARRWNASAFYGHQAVEKALKSLYFVALRREPPNTHVLTELY------REIKRAGI------EF 31 Q970M3/7-119 99.1% 41.2% LEQAVEALDTANVLI-ITEKYYASAFYSQQAAEKALKSFV-LYLGKDPGKTHSLTELA------EILEKEGVQI------ 32 Q9YE10/14-125 98.2% 42.1% LRAARRDLGRAEYSL-KVGDRAAATFWSQQAAEKALKGLL-LAFKGDYPKTHSIRRLL------EDLGLDLGLS------ 33 O28659/10-121 93.8% 21.8% RERAFKFLKNAEQLI-ESGVYDIAAFNIQQFVELYLKYAL-FKKVGDYPKTPSIKRLL------REIGKASGKIDAVEEF 34 18160446/7-116 96.4% 28.1% IKKALRYRDYAREDL-INNRYDSAAFFAQQSVEFLLKGVL-IKLTGSRPLTHSLSELL------ALLAKVLGVS-----V 35 O29662/11-116 92.9% 21.9% RRRAMGFMDAAKERL-KVGDYDLTCFMAEQAVQLYLKSVI-LELSGEVPRTHSIRQLL------SILSKLLD------EQ 36 18159706/8-116 93.8% 29.3% ILGARLFLEVAREDL-RAGRYDLAAFHSEQAAQLALKYLL-ASTIGHYPHTHSLEVLF------KLAKAVRED---VWRL 37 18159165/7-115 95.5% 20.2% LDRGIAFMKMAYIAL-SSGVYNLTCFNAHQAIEMFLKGLI-VDATGSRPFTCSLTELL------EFLKRLGREV------ 38 Q96ZT1/28-141 94.6% 20.8% MIKAQRYMELAKLAL-EKGFYSEVCFLSSLAAELYIKGVS-LAITGGFPTVHDLREIL-----NYIRINRKSESTIIDEF 39 Q974J5/6-116 93.8% 16.1% KENAIDFFNNAKDNL-SKGKYNLAMFSLEQALQLSLKYTL-YQLTGTFEKTHDVKRLM------KQVIEITKN-KELERI 40 Q97YR7/7-110 91.1% 20.2% LNNAKNFLHDARRDF-EEGIWNLSVFHSEQALQLCVKYKL-YIHLGDYPKTHDLKVLI------NSLGRFEKVE------ 41 Q973V6/5-115 93.8% 19.5% KRNAIDFLNYAKLLL-RDGKYNLALFSLEQALQLWLKYYI-STLTGSFPKACDVVNLL------RRIIELTKN-EKLKEI 42 Q96X92/5-108 92.0% 22.1% LENAKNFFHDANRDF-EEGIWNLSVFRSEQALQLCVKYKL-YTYLGDYTKTHNLKELL------EALKRFENV------N 43 Q973U8/10-120 93.8% 21.2% LRRAKDYLRASELLF-QQGFYDASALNSEVSAQLSLKGLL-YKLGVEPSRTHGIRELL------SLVYTRLGD-ERIRDF 44 Q973V4/10-134 97.3% 18.0% KRRALRFLEEAKRDL-SEGYYDIGAFHVEQALQLYIKAVI-FELFGKDYEGHGIRELIGYLSKLLKENGYDELSKKIDEL 45 O28687/5-108 92.0% 23.0% KNKALRFYSKALESF-DKGEYDFTMFFVEQTVQLAIKYLI-ARRFGEIPKTHNLRILF------EIAEQEEFY------- 46 Q973K3/6-116 93.8% 17.8% KRNALDFFAGAEYDI-RNGKHNSAMSHVEQSLQLALKYVL-FQLKGSFEKTHDIISLL------DEVIDLTRN-EKLKKI 47 P95880/15-122 91.1% 17.8% LTTAKDYLKASELSF-EHNLYEASALNSEISAQLSLI----FKLGIEPPRTHGIRELL------SLIYAKLGD-KRISDF 48 Q974A1/10-116 90.2% 23.7% KERSKYFYKESMNDS-KNKRYDIALFHLEQALQLGLKAYL-LKNKGDFPRTHSLRDLIEL-ADNECLKKVIQR------- 49 Q9V096/11-112 89.3% 32.5% IKQAERNLRSALRDL-EGGDYEWASFKAQQAAELAVKALL-RGMGSAPIG-HSITRLL-----RNLVGEGIDVP------ 50 Q97X68/10-91 72.3% 18.6% KRRALRFLDEAKRDL-NEGYYDIGSFHVEQALQLYIKAVI-FELFGKEYEGHGIRELL------GYLSKLLK-------- 51 Q97YY9/14-128 98.2% 25.6% LNIAKKDNIRAKRAL-ELKDYPECLFYSQQSVEKSVKAML-EVKLIYKKE-HDIIADA-----SNNLQDLGNEL------ 52 Q97V55/15-132 99.1% 17.6% ITQAEERLDLAKTEY-ERKKYNIVVRLCQEAVELSLKACL-RLVNIEPPKFHDVGPIL------KN-NTDKFP-QWFKEK 53 Q974F9/5-113 92.9% 13.7% RNKALEYLNASKLNF-EHGFYDIATVLAEEALYLYLVTCL-INHEVAIPWYLDFDGLL------RILEKHDNKI----SE 54 O28564/56-138 74.1% 14.3% VKMALQDFESVKILY-QSKIYSLAVYHLQQAVEKYVKAYV-LAFFGLSKK---------------EMKGYVG-------- 55 Q97Y72/11-129 96.4% 24.4% LREAKIRIKYAELSLNEDKDYAFCVRASQEIVELSIKAIL-RLLGIEYGKIHDPGKIL--------VENMDRLPSWLKKE consensus/100% h..u..............t....s.......h...h............................................ consensus/90% h.tu.t.ht.u...h.ptt.h..shh..p.shph.lp.hh...hh......hsl..lh..........t........... consensus/80% hppA.p.hp.Ap..h.ptshat.usahspQuhphhlKshl.h.htt...t.HslhtLh........htp.ht........ consensus/70% hppAhc.hp.Ach.h.ppGhYphusFhspQusphtlKuhl.hthttt..t.HslptLh......t.ltp.ht........ cov pid 81 . 1 . . ] 130 1 18160453/9-120 100.0% 100.0% VSPIEEDLRELTIHYVISRYPNA---ANAVPYELYDEKKARELVERARRV 2 Q97XB1/9-118 95.5% 33.0% -DWILKCAQELDKNYIPSRYPDVYDQGA--PLDYYSKDDATSCLECARKI 3 SACS_MOUSE/370 99.1% 19.5% LTNDVHTLEAYGVDSLKTRYPDLLPFPQ-IPNDRFTSEVAMRVMECTACI 4 Q9YCI5/15-127 97.3% 33.6% -QEMEECIAVLNKLYLPPRYPDAWPGGA-APFENYTRRDAEEALECASRV 5 AAK88591/225-3 98.2% 20.3% RQRFTTWYNILNEAYVKARYSKRFEVSE-EALTWLQERTA-ELHKLVETL 6 Q92ZG2/148-268 98.2% 19.5% QHQYVAWFNILNEAYVKSRYSKHYEISE-DALAWL-LERAHQLIADVEAI 7 Q92VW9/195-315 98.2% 17.1% QHRFTAWYNILNEAYVKARYSKHFEITD-EALSWL-LERTEHLLRLVEMI 8 AAK88587/185-3 98.2% 17.1% HHRQRAWFNTINEAYVKARYSKHFEISE-EALGWLGERTA-HLLELVKVV 9 AAK90491/172-2 98.2% 17.1% HHRERAWFNTINEAYVKARYSSQYKISQ-EALDWI-GERATLLLSLVGEV 10 Q96XM5/11-118 92.9% 26.7% -QDLIDKAKYLDKLYVPTRYPDVWEEET--PAYYYTKKEAEEAIKYAEEI 11 18159896/9-122 97.3% 34.2% SPQLVDGLAVLTKYYATSRYPDA-AGGP--PSELFTKREAEYALEIAKEL 12 Q97VT0/10-121 99.1% 51.3% VEEIRSEVNKLTLHYTISRYPDA---ANTIPYSLYTKEDAEELVKKAEKV 13 18160957/6-115 96.4% 27.2% SEELVRCAKYLTEQYIGSRYPDA-------RMLEYDKDDAEQCIKCMEMI 14 Q974A5/25-132 94.6% 32.5% PDDIIRYCDLLTPHYVMSRY---------SQFTEYNRRKAEECLNSAITV 15 Q972P8/5-114 94.6% 16.4% NDKILDCANYLSLMYLGSRY----PEEEIIDMDRS---EGEKCVRCMETI 16 Q9UZ01/10-121 93.8% 24.4% IRSNRLLLRELEDAYIDARY------EPR----KYSREDAEELIEFANKV 17 Q97WD3/46-157 94.6% 19.5% RIKERDIISLLD--DIKIRLGYS------IPLELN-EKDTEKLIKFAERI 18 O58422/9-118 93.8% 32.5% -EEIIDAVLDLNPEYIVTRYPDAANEV---PAKIYNERIAVEHLEKAKKV 19 Q96ZS6/11-121 92.9% 19.3% VKEKRKELNLVE----LSRFEGQY-----SPIDVD-SDLASDCLDTVENI 20 Q975T4/9-119 92.9% 19.3% IKAKRGELILLEDARQRGQYFSYG----------LGKDDAEICLNTAREV 21 O58139/13-126 98.2% 34.5% PREILYFAMELDRNYIAPRYPDAYPEGS--PFEYYSEDIAKELVKYAEKI 22 Q97XN9/7-119 95.5% 37.3% -QNIMEDLMVISPHFIISRYPDAANGVP---ARQYTKNMAEDLYRRAKEV 23 Q974G3/8-113 91.1% 36.2% -ADILQCATFLDKQYTPSRYPDVYYEGA--PYEYYTERDADECINCAIRI 24 Q9WZ82/1-112 96.4% 27.6% -EELMDHALELDKACIPTRYPDALPSGS--PRNRYSRIEAERLVNYAEKI 25 18159071/10-12 97.3% 35.0% PPELKEAGEELDRHYVLSRYPNAWPWGP--PHVHYRQKDAESCLKNAKSV 26 Q58700/15-135 99.1% 28.7% LLNLIPKIESLEEHWVMPRYPEPYFGELWNPLEEYTKEDAEECLKDAENV 27 18161127/14-12 96.4% 32.8% -EEVAELCRLLDKFYVPTRCVDAWSEGI--PYEYFSKSDAETAIKAAEGV 28 Q972J0/11-121 93.8% 22.9% ISENRDLLKELEEGYTETRYGSI----------DYTEEDAKECLNIMEKL 29 18160011/5-114 96.4% 29.8% GDEVAKCAKALEHHYVQSRDPDA-------RVGEYERWEAESCIECMEAL 30 18159235/9-122 98.2% 33.6% SPGLEERIAELNKFYSVSRYPDA--AAGQ-PYEVVTKGDADRSLKTAEEV 31 Q970M3/7-119 99.1% 41.2% PVKIKENLMVLSPHFIISRYPDA---ANGVPYKQYNKSIAEDLYNRVKEV 32 Q9YE10/14-125 98.2% 42.1% -EGELEDAFELTQYYYLSRYPDV---VEELPDEVIGRRSAERAVNAARRI 33 O28659/10-121 93.8% 21.8% MRENIDRISNVENAYITSRY------IPS----EFERIEVENMLKLARKI 34 18160446/7-116 96.4% 28.1% PEEAMRCAEALESHYIQARYPDA-------RLNEYRKWEGEEAVKCMEAL 35 O29662/11-116 92.9% 21.9% FDFDRKQLVFLEDAYIKARY----------LGAGYEREDAEEAIKIAEEV 36 18159706/8-116 93.8% 29.3% YEENRMAFEVMEDAYLGGRY----------LPRRYAKEVAEHLVELAGRV 37 18159165/7-115 95.5% 20.2% PEGAFREAEWMEPHYILARYPAR-------GVKPYTETTAKRCIAVMELI 38 Q96ZT1/28-141 94.6% 20.8% IRENREELRLLSNEYLVSRY---------NLGYTYVKEDAEDCLNILLKV 39 Q974J5/6-116 93.8% 16.1% MNEQNVLLDLIEQSYITARY----------LPYKYEENTVEKALKVVEEI 40 Q97YR7/7-110 91.1% 20.2% IDELMLDFLVQS--YISSRY----------LPYTFSKESAEKALNFVENM 41 Q973V6/5-115 93.8% 19.5% LDSEISTLDLLKQAYIASRY----------LPTNYDKEAVEKALNIVEAI 42 Q96X92/5-108 92.0% 22.1% VDSLM--VDFLTQSYMSKRY----------LPYVFSKETAEKVLKFVENL 43 Q973U8/10-120 93.8% 21.2% IRDNREKLIILENIRGKSQY----------GLPPVSKDEAEIALFITKEI 44 Q973V4/10-134 97.3% 18.0% IREYRRQLVDIEDAYIDSRY--EIIEYESDDLKPL-IEVSESIIKILEEV 45 O28687/5-108 92.0% 23.0% -RNNLDVLREIELAYTASRY----------FDVEYSKEIAEKSLSVAKKV 46 Q973K3/6-116 93.8% 17.8% RNEEASTLEVIRESYIKSRY----------FHFYVDRLVVERAFNTTKVI 47 P95880/15-122 91.1% 17.8% TKENREKLIILENVRGKSQY----------GLPPVSRDEAEIALSTAQEI 48 Q974A1/10-116 90.2% 23.7% -KWYI--VSLLTDAYVGSRY----------LLRNYTEKEYKASKKFVEEV 49 Q9V096/11-112 89.3% 32.5% -KKLFYIAMKLDRNYMASRYPHV-----------YPEGS--PFEYYSEDS 50 Q97X68/10-91 72.3% 18.6% ----------------ENEY----------------EELAKKVNERVSGM 51 Q97YY9/14-128 98.2% 25.6% -DVVLNALDYLSGAWNISRYPFFNGNNITTPEEFVTEEMCKEGIKYSDEV 52 Q97V55/15-132 99.1% 17.6% IDIFASYSRSLRKERELSMYGDE--ETNTPPELLYSAYDGQQSIKIAEEI 53 Q974F9/5-113 92.9% 13.7% FRKNRKIIKVLDQIRIMFRY----SSLIS-----ISRDDAKEIILFVENI 54 O28564/56-138 74.1% 14.3% HDSPKAFIRLLD------RY----------------KRSLELFLKSIQKI 55 Q97Y72/11-129 96.4% 24.4% AENIAYISRWLRAEREPSMYGDEVEGIP--PTELYTESYCRKALESAKYV consensus/100% .................................................. consensus/90% ....h..h..lp..h..scY..............h.t..sp.hhp.ht.l consensus/80% .pp.ht.h..lp..hh.sRY..............htcp.ucphlphsctl consensus/70% .pp.hthhthLpttYhhuRY..............hsccpAcphlphscpl