cov    pid  1 [        .         .         .         .         :         .         .         . 80 
 1 RECQ_ECOLI/1-8 100.0% 100.0%    GNYDRKLFAKLRKLRKSIADESNVP-PYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAHVDGDD    
 2 RECQ_HAEIN/1-8 100.0%  61.7%    ANYDKDLFARLRFLRKQIADKENIP-PYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQPFMALIQEHKAILA    
 3 PMSC_HUMAN/1-8 100.0%  12.3%    NTQQLTAFQLLFAWRDKTARREDES-YGYVLPNHMMLKIAEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPL    
 4 3885838|G38858  98.8%  22.2%    LDARTGLYARLVEARQKHANKMDVP-PAILATNKVLLDMAKMRPTTVENMKQIDGVSEGKAALLAP-LLEVIKHFCQVTS    
 5 YASB_SCHPO/1-8 100.0%  16.0%    GREALMIYRALHDWRDSVARKEDES-VRYVLPNRLLIAIAASKPVEAADVFSISKQLTPIARMYVEDIVKVVQEAEKLYN    
 6 48|O34748/1-79  97.5%  37.0%    ITENDELFERLRMVRKEIAAEQGVP-PFVVFSDQTLKEMSGKQPVNDDELLSIKGVGEQKRAKYGR--LFLQEIQAYARM    
 7 HUS2_SCHPO/1-8 100.0%  21.0%    IDVMTRCLKDLKLLRSNLMAIDDSR-VSSYFTDSVLLSMAKKLPRNVKELKEIHGVSNEKAVNLGPKFLQVIQKFIDEKE    
 8 64|Q49764/1-81 100.0%  34.6%    ADVDEELLLQLKAWRLSTAKEQNVP-AYVVLTDNTLIAIAELLPADEAALIAVPGMSVRKIEQYGSDVLQLVRCRAVAVR    
 9 83|O07183/1-81 100.0%  18.5%    DRRGLAAVRELWTARDRIAQRRDIA-PRRILPDSAIIDAAIADPKSVDDLVALPVFGGRNQRRSAAVWWAALAAARESPD    
10 30|O93530/1-80  98.8%  21.0%    RELQTTLYGRLVVARQKIASERDIL-PAVLATNKVLVDMAKLRPTTSENMKKLDGVSEAKSAMLAP-LLEVVKEFCIANS    
11 51|Q17951/1-81 100.0%  13.6%    NTRQDYALTHLFKWRDVVARAEDES-PHFVLPNHMMLSLSETLPRDVGGIYACCNPLPYFVKQRTGDILKIIVEARDVKL    
12 58|O69858/1-81 100.0%  22.2%    RRRQLAVVRELWQARDRIAQRRDVS-PGKVLGDAAIVEAALALPPNAHALAALNGFGRVNRRQLEQWQLSVDRARALSES    
13 04|Q50004/1-81 100.0%  18.5%    DRRALAAVRELWATRDHIAQRRDIA-PRRILPDTAIIDAAIADPKTIDELIAMPVFGGANQRRSAAMWLAALETARQSQD    
14 49|Q12149/1-81 100.0%  17.3%    PPEREVLVRELYQWRDLIARRDDES-PRFVMPNQLLAALVAYTPTDVIGVVSLTNGVTEHVRQNAKLLANLIRDALRNIK    
15 RND_ECOLI/1-80  98.8%  17.3%    RTRQLACLQLLADWRLRKARERDLA-VNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKT-LLALVEKAQTLPE    
16 BLM_HUMAN/1-81 100.0%  22.2%    EEMVKKCLGELTEVCKSLGKVFGVH-YFNIFNTVTLKKLAESLSSDPEVLLQIDGVTEDKLEKYGAEVISVLQKYSEWTS    
17 46|Q19546/1-81 100.0%  21.0%    PEKIDQLRSRLDDIRVGIANMHEVA-PFQIVSNTVLDCFANLRPTSASNLEMIDGMSAQQKSRYGKRFVDCVVQFSKETG    
18 17|O18017/1-82 100.0%  22.0%    GDVFTRCLQDLTHLITAVAESSGLSGPYSIVSREGIEQIAALLPRTNSDLLRIDSMTQIKVTKYGRLIMELLATYWKQVD    
19 RND_HAEIN/1-81 100.0%  17.3%    NPLELSRLRVLAQWRQNVAIERDLA-LSYIVKSEHLWKVAKNNPRNTSEMLEMGLTENEVRVRGKEILQLLSQARRISSN    
20 SGS1_YEAST/1-8  98.8%  24.7%    LNNLRMTYERLRELSLNLGNRMVPP-VGNFMPDSILKKMAAILPMNDSAFATLGTVED-KYRRRFKYFKATIADLSKKRS    
21 27|Q46527/1-81 100.0%  14.8%    RKIHQNTAEALVQLRETVAEKYDLP-RRKILSDEKIIEIALAQPQKFDDCLALLPAEHYFLAEENIAEHFEQIRTQTPPA    
22 G4105528_a/1-8 100.0%  27.2%    TEREQQLRQKLEAWRYEQARAENCA-LHTVLSDESLADMLAATPETETDLEAVHGLGSVRAAKYGRDILAVCRPFSDGID    
23 G4105528_b/1-8 100.0%  27.2%    TEREERLWQALRVWRMKQAEAEGIP-AYMIFGDKTLRDLVEKMPQNLNGLHDIYGLGEAKTERFGHGILKVCQNAADFSH    
24 G4105528_c/1-7  92.6%  25.3%    AKHKRCLMRALIQWCNETAKHEQSE-PYRILSKAALRAIAAKQPEGLAELAAVYGVGEEKAARYGAAVSAVLERDA----    
25 AJ235271        92.6%  14.7%    DENFNRTIQVLAAYREENAQTINIP-RKHFILDEDLIKLCKNMPLNYKDFKNLKLKSKYLHKKKYKDEIINLFNNL----    
   consensus/100%                  ......hh..L..h....h..........hh.p..h.th....s.t...h..h...........................    
   consensus/90%                   .p....hht.Lh.hp.t.ut..s......hh.pthl.ths...P.p.tth.th...........h...h.h..t......    
   consensus/80%                   .p...thhttLhthR.phAptps.s..hhlhssphlhphut..P.s.tthhtl.shst.hhtphtt.hhthhttht...t    
   consensus/70%                   tphtpthhptLhthRpphApppshs.shhlhssphLhphAthhPts.pthhtlsshsp.phtphst.hhtllpphtt..t    

                     cov    pid 81  ] 82 
 1 RECQ_ECOLI/1-8 100.0% 100.0%    EE    
 2 RECQ_HAEIN/1-8 100.0%  61.7%    NA    
 3 PMSC_HUMAN/1-8 100.0%  12.3%    LK    
 4 3885838|G38858  98.8%  22.2%    VQ    
 5 YASB_SCHPO/1-8 100.0%  16.0%    EQ    
 6 48|O34748/1-79  97.5%  37.0%    TD    
 7 HUS2_SCHPO/1-8 100.0%  21.0%    QN    
 8 64|Q49764/1-81 100.0%  34.6%    TQ    
 9 83|O07183/1-81 100.0%  18.5%    PP    
10 30|O93530/1-80  98.8%  21.0%    LK    
11 51|Q17951/1-81 100.0%  13.6%    EK    
12 58|O69858/1-81 100.0%  22.2%    QL    
13 04|Q50004/1-81 100.0%  18.5%    LP    
14 49|Q12149/1-81 100.0%  17.3%    NT    
15 RND_ECOLI/1-80  98.8%  17.3%    DA    
16 BLM_HUMAN/1-81 100.0%  22.2%    PA    
17 46|Q19546/1-81 100.0%  21.0%    IA    
18 17|O18017/1-82 100.0%  22.0%    ER    
19 RND_HAEIN/1-81 100.0%  17.3%    DY    
20 SGS1_YEAST/1-8  98.8%  24.7%    SE    
21 27|Q46527/1-81 100.0%  14.8%    QP    
22 G4105528_a/1-8 100.0%  27.2%    ET    
23 G4105528_b/1-8 100.0%  27.2%    DA    
24 G4105528_c/1-7  92.6%  25.3%    --    
25 AJ235271        92.6%  14.7%    --    
   consensus/100%                  ..    
   consensus/90%                   ..    
   consensus/80%                   ..    
   consensus/70%                   .t