Family alignment for the KNOX2 domain, displayed in

                                                             cov    pid  1 [        .         .         .         .         :         .         ] 70
 1 3218.JGI145866_from_209_to_260                         100.0% 100.0%    DTLKIGTDP--ALDHFM------------RSYVDMLTKFAEDLEEPFN----KFMQFKDSTTKALEGICG   
 2 3218.JGI129619_from_73_to_130                          100.0%  25.9%    DQVDITEDEKVELDRFM------------TEYTALLGDFKDVLQHHVYTDVAEAMIGCWELEQALHALTG   
 3 3218.JGI59235_from_322_to_379                          100.0%  27.6%    DHLEITEDEKTELDQFM------------AQYIMLLCSFKDHLQQHVYYDVTEAMMSCWELEQALHNLTG   
 4 3702.AT1G62990.1-P_from_80_to_135                      100.0%  19.6%    AVGYHHDRH--ELDNFL------------AQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTG   
 5 29760.GSVIVG00001072001_from_83_to_138                 100.0%  19.6%    NSLSPHERQ--ELDNFL------------SQYLLVLCTFKEQLQQHVRVHAVEAVMACREIEQTLQALTG   
 6 39946.BGIOSIBCE009454_from_98_to_153                   100.0%  19.6%    PFLSPHDKQ--ELDSFL------------AQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTG   
 7 3702.AT4G32040.1-P_from_167_to_222                     100.0%  23.2%    TLGVVVDNK--ELDHFM------------SHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTG   
 8 15368.BRADI3G19930.1_from_109_to_165                   100.0%  26.3%    GGLAAGDDTR-ELDQFM------------THYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTG   
 9 15368.BRADI3G06170.1_from_96_to_151                    100.0%  21.4%    SAGGPSGGE--ELDLFM------------THYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTG   
10 29760.GSVIVG00017886001_from_132_to_183                100.0%  36.5%    PSLSMYSQS--ELDHFM------------EAYCTTLTKLKEAMEEPQQ----ETLAFINSMQSQLEELSG   
11 59689.fgenesh2_kg.2__1305__AT1G70510.1_from_117_to_168 100.0%  34.6%    PLSCFGDDP--ELDEFM------------ETYCDILVKYKTDLARPFD----EAATFINKIEMQLQNLCT   
12 29760.GSVIVG00002753001_from_128_to_179                100.0%  36.5%    VSTCLGADP--ELDEFM------------ETYCDMLEKYKSDLARPFD----EATTFLNKIEMQLGNLCN   
13 3694.gw1.XII.1352.1_from_61_to_112                     100.0%  32.7%    VASCLGADP--ELDEFM------------ETYCDVLMKYKADLSRPFD----EATTFLNDIEAQFNTLCN   
14 39946.BGIOSIBCE017430_from_104_to_155                  100.0%  34.6%    AGGEIGLDP--ELDEFM------------ETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCG   
15 29760.GSVIVG00022604001_from_97_to_148                 100.0%  34.6%    RSGEIGADP--ELDEFM------------ESYCEVLHRYKEELSKPFD----EATSFLSDIESQLSNLCK   
16 39946.BGIOSIBCE001488_from_91_to_142                   100.0%  34.6%    GAGQIGVDP--ELDEFM------------EAYCRVLVRYKEELSRPFD----EAASFLSSIQTQLSNLCS   
17 4558.Sb01g009460.1_from_135_to_186                     100.0%  30.8%    DAHNTRPDP--ELDQFM------------ESYSELLVAWKEELTRPLR----EAKEFLTTVELQLNSITN   
18 39947.LOC_Os03g51710.1_from_125_to_188                 100.0%  21.9%    RMPPAPEDP--ELDQFMVCSIMKELKLVTEDYCKLLVECKEELSRPLQ----EAEEFLRTVESELNSINS   
19 3702.AT1G62360.1-P_from_170_to_221                     100.0%  32.7%    PTGCLGEDP--GLDQFM------------EAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSL   
20 29760.GSVIVG00025931001_from_126_to_177                100.0%  36.5%    ATSCVGEDP--ALDQFM------------EAYCEMLTKYEQELTKPFK----EAMLFLSRIECQFKALTV   
21 4558.Sb01g006790.1_from_141_to_192                     100.0%  30.8%    REPTTRPDP--ELDQFM------------EAYCNMLVKFQEEMARPIQ----EATEFFKSVERQLQLGSI   
22 39946.BGIOSIBCE012453_from_122_to_173                  100.0%  25.0%    PAQQPAADP--ELDQFM------------ETYCYMLTRYGQELARPIQ----EAEEFFRGIEEQIDSLAL   
23 15368.BRADI1G12680.1_from_53_to_104                    100.0%  25.0%    DVLEQPADP--ELDQFM------------ETYCVMLVRYSQELTRQIQ----EADHFFRNMEAHISTSAL   
24 4558.Sb01g012200.1_from_111_to_162                     100.0%  25.0%    RQEQRPADP--ELDQFM------------EIYCHMLVRYRQELTRPIQ----EADEFFRSMEAQIDSFSL   
25 39946.BGIOSIBCE012450_from_110_to_161                  100.0%  26.9%    HLQGQSSDP--ELDEFM------------ETYIDMLVSYRQELTRPIQ----EADQFFRNMEAQIDSFTL   
26 15368.BRADI1G12690.1_from_98_to_149                    100.0%  23.1%    DQRQDSLDA--ELDEFM------------ETYCHVLVRYKQELTRPIQ----EADQFFRDIEAQMDSFTL   
27 39946.BGIOSIBCE013105_from_342_to_394                  100.0%  30.2%    HEPQRDDDPD-QLDQFM------------DAYCSMLTRYREELERPIQ----EAAEFFSRVETQLDSLAE   
28 39946.BGIOSIBCE013107_from_138_to_189                  100.0%  30.8%    RRDDDVPDH--QLDQFM------------DAYCSMLTRYREELERPIL----EAAEFFSMVETQLDSIAE   
29 39946.BGIOSIBCE023580_from_136_to_187                  100.0%  34.6%    PGRHDARDP--ELDQFM------------EAYCNMLAKYREELTRPID----EAMEFLKRVESQLDTIAG   
30 39946.BGIOSIBCE012836_from_129_to_180                  100.0%  32.7%    GVLGAATEP--ELDQFM------------EAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNTLSI   
31 3694.estExt_Genewise1_v1.C_LG_II1820_from_157_to_208   100.0%  36.5%    TSRDNSKDP--ELDQFM------------EAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMICH   
32 3702.AT4G08150.1-P_from_184_to_235                     100.0%  34.6%    SVSASSRDP--ELDQFM------------EAYCDMLVKYREELTRPIQ----EAMEFIRRIESQLSMLCQ   
   consensus/100%                                                          .......t...tLD.Fh............t.Y..hL.thtt.htp.......ch...h..hp.tht..s.   
   consensus/90%                                                           ...t...c...pLDpFM............ptYh.hLhpapppLtp.hp....EA..hh.phctphpths.   
   consensus/80%                                                           ...t.st-...ELDpFM............ptYs.hLspa+ppLpc.hp....EAh.hhpplEtplpsls.   
   consensus/70%                                                           st.p.stDs..ELDpFM............-sYsthLsca+p-Lp+Php....EAhtFhpplEppLpslst