cov pid 1 [ . . . ] 35 1 RL24_BACHD/2-29 100.0% 100.0% HVKKGDTVKVISGKDKGK-------QGVILEAYPK 2 NUSG_METJA/88-1 100.0% 28.6% NIEKGDVVEIIAGPFKGE-------RAKVIRVDKH 3 RL24_SPICI/5-32 100.0% 50.0% KFKKGDLVKVIAGKHKGT-------EGPIIRVLRE 4 RL24_THEMA/2-29 100.0% 64.3% RIKKGDLVEVISGKDKGK-------RGKVLRVIPK 5 457386/190-217 100.0% 32.1% AFREGDQVRVVSGPFADF-------TGTVTEINPE 6 NUSG_AQUAE/194-0 100.0% 35.7% EFEKGDQVRVIEGPFMNF-------TGTVEEVHPE 7 Q9PE65/4-31 100.0% 57.1% RIKKGDQVIVIAGKDKGK-------QGEIIRIDGH 8 Q56435/6-33 100.0% 64.3% HVKKGDTVLVASGKYKGR-------VGKVKEVLPK 9 Q98N46/3-30 100.0% 50.0% KIRKGDKVVVLAGKDKGR-------SGEVLSVQPK 10 4980959/299-326 100.0% 46.4% GFKVGDMVKIISGPFEDF-------AGVIKEIDPE 11 RK24_TOBAC/63-9 100.0% 64.3% HVKLGDTVKIISGHDKGK-------VGEITEIIKH 12 Q9RXJ1/15-42 100.0% 60.7% HFKKGDTVIVLSGKHKGQ-------TGKVLLALPR 13 O13936/520-547 100.0% 35.7% RFRHGDYVKVIAGKYKDD-------TGMVVRISKD 14 RL24_MYCCA/5-32 100.0% 42.9% RILKGDVVKVIAGSHKGQ-------IGPITSITKD 15 C71186/48-75 100.0% 35.7% PVRVGDKVRIMRGDFKGY-------EGKVVEVDLK 16 Q9LT09/14-41 100.0% 39.3% KILRGDNVMIIRGKDKGE-------TGTIKRVIRS 17 O00267/471-498 100.0% 39.3% YFKMGDHVKVIAGRFEGD-------TGLIVRVEEN 18 13813488/101-12 100.0% 39.3% TVKPGDVVEVISGPFRGT-------QAQVIRVEEA 19 AAL03533/5-32 100.0% 60.7% KVKKGDEVVVITGKHKGK-------KGKILKVFPE 20 O57778/94-121 100.0% 28.6% GLEPGDIVELISGPFKGE-------KAKVVRVDES 21 RL24_METVA/46-7 100.0% 46.4% PVKKGDTVKVLRGSFKGI-------EGEVSKVNYS 22 NUSG_PSEAE/123-0 100.0% 32.1% LFEPGETVRVIDGPFADF-------NGVVEEVNYE 23 RL24_BORBU/4-31 100.0% 46.4% KLKIGDSVKILSGKDRGR-------IGKIASINRK 24 Q9A1W3/2-29 100.0% 64.3% FVKKGDKVRVIAGKDKGT-------EAVVLKALPK 25 RL24_LEPIN/18-4 100.0% 46.4% RIKKNDEVICITGKHKGK-------RGKVLSIDKK 26 RL24_HELPJ/4-31 100.0% 53.6% EIKKNDMVKVIAGDDKGK-------VAKVLAVLPK 27 RL24_AQUAE/5-32 100.0% 57.1% KIKKGDTVLVVRGKEKGK-------QGKVLKVYER 28 Q9AWS9/48-75 100.0% 32.1% PIRKDDEVQVVRGSYKGR-------EGKVVQVYRR 29 NUSG_STRPY/127-0 100.0% 32.1% NIKEGDVVQIIDGAFMGQ-------EGRVVEIENN 30 Q9STN3/477-504 100.0% 28.6% YFEPGNHVKVVSGTHEGA-------TGMVVKVDQH 31 O29713/90-117 100.0% 25.0% QIREGDKVEIVSGPFKGE-------MAIVKRVDEA 32 Q9H7G3/55-82 100.0% 39.3% YLFCGDTVEILEGKDAGK-------QGKVVQVIRQ 33 Q98PZ3/4-31 100.0% 46.4% KLRKNDEVIVIAGSYKGT-------KGTILKVLPK 34 RL24_TREPA/6-33 100.0% 42.9% KIRKDDMVLVIAGKDRGK-------RGAVLRVLRD 35 AAL00623/131-15 100.0% 32.1% DVEIGQTVRIIDGAFADY-------TGKITEIDNN 36 CAC95511/123-15 100.0% 25.0% DFEIGETVMVKEGPFADF-------SGKVDEMDND 37 BAB66431/96-123 100.0% 32.1% AYKVGDMVEVTSGPFRGM-------QAQVVRIDSA 38 RL24_CHLMU/5-32 100.0% 50.0% SVCVGDTVYVLAGNDKGK-------QGKVLRCLKD 39 RK24_ODOSI/8-35 100.0% 46.4% HVKIGDNVKIITGFDKNK-------IGKVSKIDRN 40 NUSG_SYNY3/150-0 100.0% 32.1% DMEIGDHIMVLSGPFKDF-------EGDVIEVSPE 41 RL24_HAEIN/4-31 100.0% 39.3% KIRQNDEVIVLTGKDKGK-------RGKVTKVLPN 42 RL24_SULSO/43-7 100.0% 46.4% RVRKGDTVRVMRGGNSGK-------EGKVVEVNTK 43 RL24_CHLPN/5-32 100.0% 35.7% NIRVGDKVFILAGNDKGK-------EGKVLSLTED 44 Q9DFL2/4-31 100.0% 28.6% FMKPGKVVMVLAGRYAGR-------KAVIVKNIDN 45 Q97EI9/6-33 100.0% 60.7% HVRKQDSVVVISGKDRGK-------IGEVLAVNPK 46 NUSG_BACSU/123-0 100.0% 32.1% DFELKETVKVIDGPFANF-------TGSIEEIDYD 47 O77364/48-75 100.0% 28.6% PVRKDDEVLICRGHNHGR-------EGKVVKINRK 48 RL26_SCHPO/48-7 100.0% 39.3% PVRRDDQITVIRGSNKGR-------EGKITSVYRK 49 RK24_PORPU/15-4 100.0% 46.4% KFKKGDLVQILSGSDKKK-------TGEIIAIIHK 50 Q9VMY1/83-110 100.0% 42.9% SFFRGDRIEVLVGKDKGK-------QGIVTQVIPE 51 217030/265-292 100.0% 32.1% DFEVGDSVTVTDGPFATL-------QATINEINPD 52 RK24_GUITH/2-29 100.0% 39.3% TIKQGDKVQVIAGSYKGE-------ITEVLKVIRK 53 YDS2_SCHPO/67-9 100.0% 42.9% HIFKGDYVYVHQGPLKGK-------WGRVVETNKY 54 RL24_MYCGA/3-30 100.0% 46.4% RIKKGDKVVIIAGKHKQK-------TGIVLQVFVK 55 NUSG_DEIRA/137-0 100.0% 35.7% DLKAGDMVRVTSGPFADF-------SGVVSEVNAP 56 RS4E_METJA/181-0 100.0% 21.4% PFEVGKLAYITGGKHVGD-------FAKIVEIERR 57 RL26_CAEEL/48-7 100.0% 35.7% PIRTDDEVVVMRGRHKGN-------TGRVLRCYRK 58 RL24_MYCPN/3-30 100.0% 50.0% RIKKGDKVVVITGKNKGG-------SGIVLKIMPA 59 NUSG_STAAU/128-0 100.0% 21.4% ELEVGEQVRIKSGPFANQ-------VGEVQEIETD 60 RS4_SOLTU/174-2 100.0% 28.6% KFDVGNVVMVTGGRNRGR-------VGVIKNREKH 61 NUSG_HELPY/121-0 100.0% 17.9% FFEQGEVVRVVEGPFANF-------TATVEEYDVE 62 P91353/108-135 100.0% 42.9% TFFPGDLVQVMVGKDKGR-------QGLVLTTSRD 63 43615/42-69 100.0% 32.1% RVNAGDTVEVLRGDFAGE-------EGEVINVDLD 64 NUSG_AERPE/96-1 100.0% 21.4% ALKPGQVVEIVAGAFKGM-------KARVIDVNQS 65 NUSG_LACLA/131-0 100.0% 25.0% DVFVGKRVRIVDGAFSGF-------EAPITEINGD 66 Q9TLU3/19-46 100.0% 46.4% SVKSGDTIKVISGKYKNI-------VAKVLRVLKY 67 Q9STN3/425-452 100.0% 35.7% HFMKGDAVIVIKGDLKNL-------KGWVEKVDEE 68 Q97BW5/23-50 100.0% 42.9% PIVKGDVVKVVSGARKGE-------GGKVAEVDHH 69 Q9AY43/4-31 100.0% 25.0% FLKPGKAVILLQGRFAGR-------KAVIVRVFEE 70 NUSG_LIBAS/15-4 100.0% 17.9% FFEVGERVCVSDGPFASF-------NGIVKNVDEE 71 16566725/174-20 100.0% 17.9% KFESGNLCMITGGRNLGR-------VGTIVSRERH 72 RM40_YEAST/62-8 100.0% 35.7% KFIPGDRVVVMSGASKGN-------IAVIKSFDKR 73 NUSG_TREPA/131-0 100.0% 17.9% TFLVGQQVRIVEGPFATF-------SGEVEEVMSE 74 AAK82454/274-30 100.0% 35.7% AFTPGASVHVLSGPFEGF-------TGSLLEVNRK 75 O00267/419-446 100.0% 32.1% NFQPGDNVEVCEGELINL-------QGKILSVDGN 76 Q9V460/634-661 100.0% 32.1% QIRRRDVVKVMEGPHAGR-------SGEIKHLYRS 77 RS4_CHLS6/174-2 100.0% 25.0% KFEVGSLCLITRGKHLGT-------IAVIKEIRKT 78 O96655/6-33 100.0% 25.0% YIRAGRLVRIIRGRRQDR-------VGVIVDIIDA 79 NUSG_CHLTR/120-0 100.0% 25.0% KFEVGSQVKINDGVFVNF-------VGVVSEVFHD 80 O80770/588-615 100.0% 42.9% VVAVKDVVRVIEGPSKGK-------QGPVVQIYKG 81 Q9V1U8/178-205 100.0% 32.1% PFEKGAYVFVTQGKNVAR-------KGRIVEIKKF 82 Q9DDT5/592-619 100.0% 32.1% NIHVKDIVKVIDGPHSGR-------EGEIRHIFRG 83 NUSG_BORBU/130-0 100.0% 17.9% DFEEGERVRIKGGPFDSF-------EGLISSIDYE 84 2612828/7-34 100.0% 32.1% YVEVGRVVLVTKGEYTGK-------LAVIVDIVDH 85 Q98RW9/48-75 100.0% 35.7% ILKKNYEIKVKRGDFKGK-------TGKVIQIKPE 86 O62594/171-198 100.0% 25.0% KSSNGKVVMVTGGANRGR-------IGEIMSIERH 87 RL24_BUCAI/4-31 100.0% 35.7% KLRRNDSVVILTGKDKGK-------TGIIKNILSL 88 RS4E_ARCFU/167-0 100.0% 21.4% KFEEGALVMITGGTHAGE-------IGRIKSYKIV 89 O80770/683-710 100.0% 32.1% DHLVGTYVKIRLGPFKGY-------SGRLVEVKDK 90 SPT5_YEAST/583-0 100.0% 32.1% IFEPGDHVTVINGEHQGD-------AGLVLMVEQG 91 SPT5_YEAST/381-0 100.0% 17.9% ALEEGSYVRIKRGIYKGD-------LAMVDQISEN 92 Q21338/420-447 100.0% 21.4% PFVPGDIVEVKAGELVNL-------RGKVMTVDGT 93 O13936/727-754 100.0% 32.1% DKAIGATVRIRRGPMKGL-------LGVIKDTTDA 94 Q9BQA8/415-442 100.0% 28.6% PKAEGDRVMVVLGPQTGR-------VGHLLSRDRA 95 Q9HIB6/244-271 100.0% 21.4% GLELGSLVELVEGPFKGE-------KAKIISIDSV 96 Q9STN3/1001-102 100.0% 25.0% PPRKSDRVKIVGGQYRGS-------TGKLIGIDGS 97 E1255824/5-32 100.0% 25.0% FVEVGRVAYVSFGPHAGK-------LVAIVDVIDQ 98 O00267/703-730 100.0% 32.1% NELIGQTVRISQGPYKGY-------IGVVKDATES 99 CAD10081/91-118 100.0% 28.6% VLGPGGCVQVLAGAHKDL-------YGKIEGVDPD 100 NUSG_RICPR/137-0 100.0% 17.9% LYEVGEIVTVTDGPFETF-------MGTVEAIDKA 101 RS4E_SULAC/174-0 100.0% 25.0% TIKEGVYAMIIGGRNAGL-------HGKISKIQLA 102 T54_HUMAN/238-2 100.0% 28.6% GLVPGGAVVVLSGPHRGL-------YGKVEGLDPD 103 Q97BW4/168-195 100.0% 21.4% KMQPGNKAFITGGSHVGE-------TGTISKIEIK 104 3647233/174-201 100.0% 10.7% PFEVNNLCMIVGGHNLGR-------VGAVTHREKH 105 SPT5_YEAST/533-0 100.0% 21.4% TFQPGDRIEVLNGEQRGS-------KGIVTRTTKD 106 Q9UZJ5/3-30 100.0% 25.0% AIDVGRIAVIIAGRRAGQ-------KCVIVDIIDK 107 Q9XYY6/29-56 100.0% 25.0% SCAPGAIAIILAGRFRGR-------RAVILKQLPH 108 RS4E_METTH/174-0 100.0% 21.4% PFEKDSLGLVTGGRHTGE-------IGKIKKINIT 109 R14E_METJA/3-30 100.0% 25.0% AIEVGRVCIKTAGREAGK-------VCVIVDILDK 110 R14B_YEAST/14-4 100.0% 28.6% LVEVGRVVLIKKGQSAGK-------LAAIVEIIDQ 111 O13936/471-498 100.0% 28.6% EFQPGDHVEVYVGEQTGV-------SGVVENVRGS 112 SPT5_YEAST/798-0 100.0% 28.6% EVALGKTVRIRSAGYKGQ-------LGIVKDVNGD 113 CAD10081/288-31 100.0% 25.0% PKNDSDYIMVVLGEHRGQ-------VGRILKRDRE 114 Q21924/221-248 100.0% 28.6% EIKVGSFIKVVDGRNKGV-------YGKVEGRDDD 115 O13936/333-360 100.0% 17.9% ELLPGAYVRIRRGKYAGD-------LAQVDNLSEN 116 R27B_SCHPO/4-31 100.0% 32.1% ILKPGKVALVTRGRFAGK-------KVVILQNVDQ 117 BAB65408/109-13 100.0% 25.0% ELSEGKYAIIIGGRNVGL-------HGVIKTIQYA 118 43616/170-197 100.0% 21.4% EYEEGALVTAVDGAHAGE-------VGEVEEIQVT 119 RL27_CANAL/4-31 100.0% 28.6% FIKSGKVAIVVRGRYAGK-------KVVIVKPHDE 120 RS4E_AERPE/187-0 100.0% 17.9% KFGEGAIAIIVGGRNVGR-------VGVVKSVQKG 121 Q21338/1153-118 100.0% 28.6% KPQPGDDARVIFGQDAGH-------SGQLVSMDGF 122 Q97EG4/118-145 100.0% 32.1% DIVVGENVKVISGPLMDQ-------VALIQEINLE 123 Q9V460/460-487 100.0% 25.0% SFSMGDNVEVCVGDLENL-------QAKIVAIDGT 124 Q9C801/231-258 100.0% 32.1% VFFVGKEVRIIAGRDVGL-------KGKIVEKPGS 125 O00267/1034-106 100.0% 35.7% TPTKNNKVKVILGEDREA-------TGVLLSIDGE 126 Q21338/729-756 100.0% 28.6% LTLIGKNVRIIKGPMKGH-------FGIVRDATED 127 Q9V460/739-766 100.0% 28.6% REILGKTIKISGGPYKGA-------VGIVKDATES 128 O00267/272-299 100.0% 17.9% NLKPKSWVRLKRGIYKDD-------IAQVDYVEPS 129 Q9STN3/273-300 100.0% 14.3% DLSRDTWVRMKIGTYKGD-------LAKVVDVDNV 130 Q21924/401-428 100.0% 21.4% PREIGEKLMIVAGKRSGQ-------LAVMLDKDKR 131 Q9C801/401-428 100.0% 35.7% LPRRGGPVLVLSGKHKGV-------YGNLVEKDLD 132 O13936/639-664 92.9% 42.9% EIRIGDKVKEVGGE--GK-------QGTILHIYRA 133 O80770/937-964 100.0% 25.0% CPKKNERVKILGGKYCGS-------TAKVIGEDGQ 134 Q9V460/1026-105 100.0% 28.6% LPCNGDEFKIIYGDDRES-------VGRVLSKDGD 135 Q21338/595-629 100.0% 25.7% SIEAKDLVKVIGGPNAKERETDEDPVGEVLYAFRG 136 NUSG_NEIMA/2-17 100.0% 25.0% EFEVGQQVRVNEGPFADF-------NGVVEEVNYE 137 NUSG_BACHD/2-17 100.0% 25.0% DFQLKESVKVKEGPFANF-------IGTIEEIQLD 138 NUSG_VIBCH/6-18 100.0% 21.4% MFEAGEVVRVNDGPFADF-------NGTVEEVDYE 139 Q9A3J9/10-184 100.0% 17.9% LYEVGENVRVTDGPFASF-------NGSVEYVDEE 140 NUSG_MYCTU/46-2 100.0% 21.4% DYEVGESVTVMDGPFATL-------PATISEVNAE 141 Q9LAK7/121-317 100.0% 17.9% DFTVGEAVTILTGAFASV-------SATISSIDPE 142 Q98N71/2-175 100.0% 17.9% TFEIGEAIRVSDGPFASF-------NGFVQEVDEE 143 NUSG_CAMJE/3-17 100.0% 14.3% SFEEGENVRITEGPFANF-------TAIVEEYDMV 144 Q9PPQ8/23-249 100.0% 17.9% NFEVDQEVKIIADTFFGE-------IAKIAKIDQN 145 Q9KX70/6-266 100.0% 28.6% ELKVGHMVDINSGDYSGL-------SGQISRIIDN 146 Q98R28/3-192 100.0% 20.0% KFREGLFVKIVDGPFKNDE-----IVYKIKKTNHE 147 AAK83588/96-331 100.0% 28.6% KLAAGSTVRVLSGTFAEF-------VGNLKKLNRK 148 RFAH_ECOLI/1-16 100.0% 25.0% TPYPGDKVIITEGAFEGF-------QAIFTEPDGE 149 CAC93238/1-162 100.0% 35.7% VPKPGDIVKIIDGVFAGL-------QAIYTEPDGE 150 Q9KTB3/1-165 100.0% 32.1% LPEKGQTVRVARGQFAGI-------EAIYLEPDGD 151 AAK86266/73-249 100.0% 28.6% QFKRGDKVRFVLGPFASF-------GGNILKLRKD 152 O27714/15-164 100.0% 32.1% SIKKGSIVELISGPFKGE-------RAKVIRIDES 153 Q9ZET1/8-166 100.0% 21.4% YLRVGQRVRIIEGPLTGL-------EGSLVTSKSQ 154 Q9HS73/4-140 100.0% 21.4% GIAENDIVELIAGPFKGE-------KAQVQRIDEG 155 Y054_MYCPN/7-20 100.0% 21.4% LVTNTAIVEMDADKFDEK-------CQYILKHKQV 156 Q9V460/213-555 100.0% 32.1% YFKTGDHARVLAGRYEGE-------TGLIIRVEPT 157 Q984H9/16-196 100.0% 9.1% TFPEGQAIRVKQDWQHKHM--LAGFHGEVVSVTGR 158 Q9ZVU5/294-410 100.0% 21.4% LPQIGGMVKIVNGAYRGS-------NARLLGVDTE 159 Q21338/417-528 100.0% 39.3% YFKEGDHAKVISGRYEGH-------TGLIVRVKDS 160 Q9VPH4/272-387 100.0% 14.3% IPALDKPVMVVNGAYRGS-------EALLRKLDER 161 Q9XWF2/290-403 100.0% 14.3% IPSLGRQMMIVNGAYRGQ-------EATLESIDEK 162 O60870/277-392 100.0% 21.4% IPAPGKRILVLNGGYRGN-------EGTLESINEK 163 Q9STN2/28-141 100.0% 21.4% RPRKSDHVKILGGSYLGL-------TCKLIGIDGL consensus/100% ....t..h....s...t...........h...... consensus/90% ....sp.s.lhtG...s.........u.l.th..t consensus/80% .ht.Gp.lhlhtG..ts.........u.l.ph..p consensus/70% .hp.GchVhlhtG.htGh........uhlhplptp