cov pid 1 [ . . . . : . . . 80 1 5270.UM06280.1_from_771_to_939 100.0% 100.0% NVLIMTTRVAQKSYGAEKRFLCPPPLVILIGSSWW-NVCPASTRPSPFAPAGAADPDQAAPTVLSPPRVT---------- 2 4896.SPCC1223.13-1_from_472_to_630 80.5% 16.1% AFYLCMPSLCQKSYGTERRYLCPPIVLYLLGTTW------------LNNVTDNLKISAQTLEDKDNPKFAKNIFYYNADG 3 6238.CBG05522_from_223_to_389 89.3% 28.1% IISIFHAKVAQKSYGNEKRFFCPPPCIYLIGQGWKLKKQRVLDLYKSLKASSQKELLNAMDNDPVQEQQSTELVAYI--G 4 214684.CND02990_from_341_to_514 90.5% 34.2% RIIVMSPKVGQKSYGTEKRFLVPHPQAILIGSGWW-----------------AKSPDGCPVSPLQPPRIN---------- 5 214684.CNA01890_from_115_to_396 100.0% 10.6% TLEVWHPTTGQKSYGKERRMLNPPPILRLSGPASSCISSITMVSVVSPNITQPVAICAPQTHHMGRPPDITPHLGTP--G 6 9031.ENSGALP00000023161_from_31_to_162 71.6% 31.1% TVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGWKKKKEQMERDGCTE--------------------QESQPCAFI--G 7 10090.ENSMUSP00000017151_from_66_to_204 75.7% 28.9% TVWILHAKVAQKSYGNEKRFFCPPPCVYLAGPGWRVKPMQDQALQSAE--------------------TGPTVCGYM--G 8 7165.AGAP008935-PA_from_83_to_215 72.2% 29.4% VIVILHAKVAQKSYGNEKRFFCPPPCIYLFGEGWRLRKEQMLRRGESE--------------------QSTQLCAFI--G 9 7719.ENSCINP00000001527_from_72_to_204 72.2% 28.3% TLIVLHAKVAQKSYGNEKRFFCPPPCMYLLGNGWKRKQQILEEEEGSS--------------------EAGQLHAFI--G 10 6945.ISCW010197-PA_from_153_to_284 71.6% 27.8% VLVILHAKVAQKSYGNEKRFFCPPPCVYLLGDGWQRKRDQLLRDGEAD--------------------QAAQLCAFI--G 11 28377.ENSACAP00000012194_from_16_to_154 75.7% 28.9% TVLILHAKVAQKSYGNEKRFFCPPPCVYLTGPGWKEKKEEIKAKDLTE--------------------SSSKVCGYI--G 12 7955.ENSDARP00000104008_from_17_to_155 75.7% 29.4% SVTILHAKVAQKSYGNEKRFFCPPPCVYLSGHGWKVRQEQFKASGLNE--------------------SACRIFGYM--G 13 7425.XP_001600894_from_33_to_166 72.8% 30.0% VVVIFHAKVAQKSYGTEKRFFCPPPCVYLRGNAWAMRQEQMRRDGESE--------------------QSSQLCAFI--G 14 45351.JGI206550_from_16_to_149 72.8% 30.0% TVVIFHAKVAQKSYGNEKRFFCPPPCVYLFGEGWRNRQRLLQQAGEDDG-------------------NNQQPVAFI--G 15 99883.ENSTNIP00000007897_from_3_to_134 73.4% 29.9% SVTILHAKVAQKSYGNEKRFFCPPPCVYISGHGWTAMEEPLQ-------------------------------------- 16 7739.JGI166111_from_17_to_148 71.6% 31.7% TVVIMTAKVAQKSYGNEKRFFCPPPLLYLMGDGWKHRLQPVGLPGEAE--------------------NEAQPYAFI--G 17 4896.SPCC736.08-1_from_179_to_304 63.9% 18.2% TVSCRHSSVIQKSYGSEKRYLCPPPMVYINGNYSSIFNQSF----------------------------RTEISIMNDFG 18 10228.JGI49676_from_12_to_153 78.7% 31.5% SIVILHAKVAQKSYGNEKRFFCPPPCVYLKGDRWKLNRRYIKTNCQNNSVNGHND--------------STHLRAFI--G 19 5306.JGI98661_from_4_to_156 89.9% 52.4% TVIVMSSKVAQKSYGTEKRFLCPPPTAIMIGNSWWSDVHRRGEEPK-----------------LCPPRVV---------- 20 51511.ENSCSAVP00000002376_from_14_to_186 92.9% 29.2% RVVILHAKVAQKSYGNEKRFFCPPPCVHLLGAGWKTKQRRKMTSSNASPIPSPST---STSLASQLGSLASEVCLFM--G 21 135651.CBN08231_from_25_to_156 71.6% 25.0% VIRILHAKVAQKSYGSERRFFCPPPCVYLIGQGWKKAQKEL------------------IDNNPTMDRRSTELVAYT--G 22 7719.ENSCINP00000025649_from_49_to_194 78.1% 28.4% KVVILHAKVAQKSYGSEKRFFCPPPCVHLLGTGWKTKQRRKMTSS---------------------------ICLFV--G 23 5270.UM05862.1_from_378_to_565 79.9% 16.7% TIRCSHASVAQKSYGSEKRFFNPPPIISITGPLRRYAEHGAATLLTPLSSEDPEE----------DQCRVSLVVRGDTDE 24 6085.XP_002162622_from_80_to_211 70.4% 30.2% IVTILHAKVAQKSYGNEKRFFCPPPCVYLSGKGWKKRKEEKGE--------------------------SCQLYPFVFTN 25 9031.ENSGALP00000006289_from_32_to_162 71.0% 26.1% TVLILHAKVAQKSYGNEKSFPSPP----LPSPSSPFVPA------------------------RDVGEAGLRVWGYM--G 26 135651.CBN24462_from_57_to_175 64.5% 22.3% VIRILHANVAQKSYGSERRFFCPPPSVYLIGGGWK---------------------------------EKSELVVHI--N 27 135651.CBN14524_from_309_to_428 65.1% 20.7% VLTILHASVAQKSYGSERRFFCPPPCVYL---------------------------------STAMNQRSKEYIAYI--G 28 81824.JGI25160_from_375_to_506 70.4% 23.6% KLTILHPRVVQKSYGNEKRYFCPPPQIHLSGRNWNHPQL-----------------------------GEPRVFVSMHLN 29 29883.JGI300968_from_112_to_245 64.5% 20.1% TVICLHAAVAQKSYGSEKRFLCPPPVVHIEGPVWHMRTQ------------------------------QLAMAVVSESG 30 5306.JGI26175_from_7_to_140 63.3% 20.4% TVLCLHAAVAQKSYGTEKRFLCPPPIVHIEGPVWNMKNQ------------------------------QFSMTVVSEGG 31 9600.ENSPPYP00000012350_from_68_to_168 53.3% 17.2% TVRILHAKVAQKSYGNEKRFFCPPPCVYLSGPGWRVKPGQDEG------------------EGGQGLPTSCSVGRTTRLG consensus/100% .h.h..sthhQKSYGtE+ph.sP.....h................................................... consensus/90% .lhhhpspVuQKSYGsE+RahsPPP.hhl.G................................................. consensus/80% slhlhHupVAQKSYGsEKRFhCPPPhlaL.G.sWt...t..............................t...hhh...s consensus/70% slhIhHA+VAQKSYGsEKRFFCPPPslaL.GsuWpht.p..............................t.phhhh...G cov pid 81 . 1 . . . . : . 160 1 5270.UM06280.1_from_771_to_939 100.0% 100.0% INISGEPGVQDGALEWASSSGRLID---VGNPSSEMA-----ISGRCIGKQLYISDVD--EKRRHVEALVAISVP----- 2 4896.SPCC1223.13-1_from_472_to_630 80.5% 16.1% ALISPETDIAKSTYQL-------------TNYNENTNFDSFPVWGNALLKTIYYTG-----QGKNDGFGRSTFL------ 3 6238.CBG05522_from_223_to_389 89.3% 28.1% IGS-DNAERQQLDFST------------GKVRHPGDSRQDPNIYDYCAAKTLYISDSD---KRKYFDLNAQFFY------ 4 214684.CND02990_from_341_to_514 90.5% 34.2% ISLTGEQAVKDSIISWTDLNGKNMD---EKASTQGVKIDDQPFTGSVAGKNLHISDND--PKRKEVKALVTVKAPLNKHA 5 214684.CNA01890_from_115_to_396 100.0% 10.6% VEDKKKERREEQKKLRTAALNAGFAATLPKNRNATDLKDRTLLKDGLTFPGLWIGEEA--GKMKEFRLELKIYAEPTEKG 6 9031.ENSGALP00000023161_from_31_to_162 71.6% 31.1% IGN-SDQEMQQLNLEG---------------------------KNYCTAKTLYISDSD---KRKHFMLSVKMFY------ 7 10090.ENSMUSP00000017151_from_66_to_204 75.7% 28.9% LDGASGSAPETQKLNFEEQPDS---------------------REFGCAKTLYISDAD---KRKHFRLVLRLVL------ 8 7165.AGAP008935-PA_from_83_to_215 72.2% 29.4% IGS-PEQEMQPLDLNN--------------------------PKQYCAAKTLFISDSD---KRKHFMLSVKMFY------ 9 7719.ENSCINP00000001527_from_72_to_204 72.2% 28.3% IGS-SEQEMQQLHLDG---------------------------KNFCTAKTLYISDTD---KRKHFMLNVKMFFG----- 10 6945.ISCW010197-PA_from_153_to_284 71.6% 27.8% IGN-SDQDMQQLDFAG---------------------------KSYCAAKTLFISDSD---KRKHFMLSVKLFY------ 11 28377.ENSACAP00000012194_from_16_to_154 75.7% 28.9% LDSMGNSHVESQKLNFEEQPDS---------------------KEFSCAKALYISDSD---KRKHFRLVLRLFF------ 12 7955.ENSDARP00000104008_from_17_to_155 75.7% 29.4% LDSSNDPRTDSFKLSFEEQTDK---------------------KMFACAKTLYISDTD---KRKHFRLLLHLFH------ 13 7425.XP_001600894_from_33_to_166 72.8% 30.0% IIGNADQDVQQLDLNNEE--------------------------QYCAAKTLFISDSD---KRKHFMLSIKMFH------ 14 45351.JGI206550_from_16_to_149 72.8% 30.0% IGNSSEQEMQQLIIEE---------------------------KGYGAAKTLFISDSD---KRKHFELSVKLLY------ 15 99883.ENSTNIP00000007897_from_3_to_134 73.4% 29.9% ----VDSCSQSQADAFKLVF--------DQQSNSKVRQSQLGFQMFACAKSLFISDQD---KRKHFCLLLRLFL------ 16 7739.JGI166111_from_17_to_148 71.6% 31.7% IGS-AEQEMQQMNLEG---------------------------KNWAVAKTLFISDTD---KRKAFELKVKLFY------ 17 4896.SPCC736.08-1_from_179_to_304 63.9% 18.2% QC------SQPISEEYTG-------------------------QGCMIFRSLHISS-LVAAKSKNLRLSLDMF------- 18 10228.JGI49676_from_12_to_153 78.7% 31.5% IGN-SDQEMQPLSIEE---------------------------NGYGAAKALYISDQD---KRKHFQLSVKLYNM----- 19 5306.JGI98661_from_4_to_156 89.9% 52.4% VSISGEPAPQEGSIEWTSATGKAFD---VSDPPTGTT-----YIGRCVGKQLFISDVD--EKKKKVEALVKIMAP----- 20 51511.ENSCSAVP00000002376_from_14_to_186 92.9% 29.2% VGG-GENELQQVFLDPPSKVNHAIIL--PQSVDIHIKTYQT-PQNYAAAKTLHTPDSD---KRKHFEIHVKMFY------ 21 135651.CBN08231_from_25_to_156 71.6% 25.0% IDS-DHTKWQQLDFSS--------------------------GKDYCAASKLHISDSD---KRKYLYLNTQFFY------ 22 7719.ENSCINP00000025649_from_49_to_194 78.1% 28.4% VGG-GENELQQVFLDPPAKVKH------PKPHFIQLFTFITIRRNYAAAKTLHTPDSD---KRKHFEIHVKMFY------ 23 5270.UM05862.1_from_378_to_565 79.9% 16.7% YFSNENVAVLDGRLET-------------------------------KMRSLYVTPTG---RSKSFRLQLNLLRPSGLEP 24 6085.XP_002162622_from_80_to_211 70.4% 30.2% IGSPDQPGFQQYDINEKENI------------------------AFCSAKSMYISDVD---KRKNFIIHSQLIF------ 25 9031.ENSGALP00000006289_from_32_to_162 71.0% 26.1% LDTMGSSLMETQKLSFEEQPDA---------------------KGFGCAKALYISDAD---KRKHFRLVLKLFF------ 26 135651.CBN24462_from_57_to_175 64.5% 22.3% IDS-DHSKWQKLNCST--------------------------GKDYCVAKEFHVSNSD---ERESFDLKTQLFF------ 27 135651.CBN14524_from_309_to_428 65.1% 20.7% VDS-DYTEWQQLDFSN--------------------------GKGYSAAKKIYISDSD---ARKVFNLNTKVLN------ 28 81824.JGI25160_from_375_to_506 70.4% 23.6% YEHTHQTEIPLSRLAD--------------------------SEFHGTASQLFIPDTD---KRKSFCLQLKVFFQ----- 29 29883.JGI300968_from_112_to_245 64.5% 20.1% ERSFEQKAPLDNNMTA-------------------------------SFKFLHVTGTA---KAKSFQLSLDIAEPP---- 30 5306.JGI26175_from_7_to_140 63.3% 20.4% ERSFEQRAPIDHNLSA-------------------------------SFKFLHVTGSA---KSKSFQLSLNITEPS---- 31 9600.ENSPPYP00000012350_from_68_to_168 53.3% 17.2% PRGGGSQAQ--------------------------------------SPRALW---------RRALSLPGTCVL------ consensus/100% ...................................................ha..........c...h..th........ consensus/90% .....p.t.....ht.................................h+tlahss.s...cpKth.h.hphh....... consensus/80% htt.sptt.pp.thp..............................hsssKtLalosss...K+Kph.l.hphhh...... consensus/70% lss.sppthpp.php............................pthssuKsLaISDsD...KRKpFpLtlphhh...... cov pid 161 . . . 2 . . . . 240 1 5270.UM06280.1_from_771_to_939 100.0% 100.0% -------GS-------------------------------------SPMDRRLLGT------------------------ 2 4896.SPCC1223.13-1_from_472_to_630 80.5% 16.1% ----------------------------------------------------QLSV------------------------ 3 6238.CBG05522_from_223_to_389 89.3% 28.1% -------GCGM-----------------------------------------EIGQ------------------------ 4 214684.CND02990_from_341_to_514 90.5% 34.2% GPNGWGSAKGTLS---------------------------------DVTNDNVFGI------------------------ 5 214684.CNA01890_from_115_to_396 100.0% 10.6% LSSPSTQDFAQSSYHLGNPDNDHETAHTFADMLEPPSMDALQPLAEAVQQSSQQGHDTLSEHFPEVEPSLAATNLHNDND 6 9031.ENSGALP00000023161_from_31_to_162 71.6% 31.1% -------GNSD-----------------------------------------DIGV------------------------ 7 10090.ENSMUSP00000017151_from_66_to_204 75.7% 28.9% -------RGGQ-----------------------------------------ELGT------------------------ 8 7165.AGAP008935-PA_from_83_to_215 72.2% 29.4% -------GSGH-----------------------------------------DIGV------------------------ 9 7719.ENSCINP00000001527_from_72_to_204 72.2% 28.3% -------GGGA-----------------------------------------DVGQ------------------------ 10 6945.ISCW010197-PA_from_153_to_284 71.6% 27.8% -------GNGE-----------------------------------------DVGV------------------------ 11 28377.ENSACAP00000012194_from_16_to_154 75.7% 28.9% -------SNGQ-----------------------------------------EIGT------------------------ 12 7955.ENSDARP00000104008_from_17_to_155 75.7% 29.4% -------NGGQ-----------------------------------------EIGT------------------------ 13 7425.XP_001600894_from_33_to_166 72.8% 30.0% -------GNGH-----------------------------------------DIGV------------------------ 14 45351.JGI206550_from_16_to_149 72.8% 30.0% -------PNGD-----------------------------------------HVGI------------------------ 15 99883.ENSTNIP00000007897_from_3_to_134 73.4% 29.9% -------GHRQ-----------------------------------------EVGL------------------------ 16 7739.JGI166111_from_17_to_148 71.6% 31.7% -------GTGD-----------------------------------------DVGM------------------------ 17 4896.SPCC736.08-1_from_179_to_304 63.9% 18.2% -------------------------------------------SNVNNQLLSHLVTSS---------------------- 18 10228.JGI49676_from_12_to_153 78.7% 31.5% -------DN--------------------------------------NQIIRDIGI------------------------ 19 5306.JGI98661_from_4_to_156 89.9% 52.4% -------SA-------------------------------------DDEPERVIGT------------------------ 20 51511.ENSCSAVP00000002376_from_14_to_186 92.9% 29.2% -------GDGS-----------------------------------------EIGL------------------------ 21 135651.CBN08231_from_25_to_156 71.6% 25.0% -------GCGK-----------------------------------------EIGS------------------------ 22 7719.ENSCINP00000025649_from_49_to_194 78.1% 28.4% -------GDGS-----------------------------------------EIGL------------------------ 23 5270.UM05862.1_from_378_to_565 79.9% 16.7% HLPIFSPLKKSRA-------------------------------ADALSPAMSIGS-----------------------P 24 6085.XP_002162622_from_80_to_211 70.4% 30.2% -------QDGK-----------------------------------------NLGI------------------------ 25 9031.ENSGALP00000006289_from_32_to_162 71.0% 26.1% -------SNGQ-----------------------------------------EIGT------------------------ 26 135651.CBN24462_from_57_to_175 64.5% 22.3% -------GCGN-----------------------------------------EIAS------------------------ 27 135651.CBN14524_from_309_to_428 65.1% 20.7% -------KCGR-----------------------------------------EIGL------------------------ 28 81824.JGI25160_from_375_to_506 70.4% 23.6% -------NDES-------------------------------------NEVRDVGT------------------------ 29 29883.JGI300968_from_112_to_245 64.5% 20.1% --------------------------------------------------PPALNL------------------------ 30 5306.JGI26175_from_7_to_140 63.3% 20.4% --------------------------------------------------PP--TA------------------------ 31 9600.ENSPPYP00000012350_from_68_to_168 53.3% 17.2% -------------------------------------------------------------------------------- consensus/100% ................................................................................ consensus/90% .....................................................hs......................... consensus/80% ........t...........................................plGh........................ consensus/70% .......sstt.........................................plGh........................ cov pid 241 : . . . ] 286 1 5270.UM06280.1_from_771_to_939 100.0% 100.0% -----------------------FPSRPIKVISKPSKKRQSSRNTE 2 4896.SPCC1223.13-1_from_472_to_630 80.5% 16.1% ---------------QSKTKYFKLENLRLGVISKPSQKRALMKVSD 3 6238.CBG05522_from_223_to_389 89.3% 28.1% -----------------------FVSQRIKVISKPSKKKQSMKNTD 4 214684.CND02990_from_341_to_514 90.5% 34.2% -----------------------FESKDIKIISKPSKKRSTAKSGE 5 214684.CNA01890_from_115_to_396 100.0% 10.6% AENPGNSPLPITQATTEEQPLGSFLSGPIRIVSKPSRKTSKTRSLA 6 9031.ENSGALP00000023161_from_31_to_162 71.6% 31.1% -----------------------FLSKRIKVISKPSKKKQSLKNAD 7 10090.ENSMUSP00000017151_from_66_to_204 75.7% 28.9% -----------------------FHSRLIKVISKPSQKKQSLKNTD 8 7165.AGAP008935-PA_from_83_to_215 72.2% 29.4% -----------------------FQSKRIKVISKPSKKKQSLKNAD 9 7719.ENSCINP00000001527_from_72_to_204 72.2% 28.3% -----------------------FSSKRIKVISKPSKKKQSLKNAD 10 6945.ISCW010197-PA_from_153_to_284 71.6% 27.8% -----------------------FQSKRIKVISKPSKKKQSLKNAD 11 28377.ENSACAP00000012194_from_16_to_154 75.7% 28.9% -----------------------FHSKLIKVISKPSQKKQSLKNTD 12 7955.ENSDARP00000104008_from_17_to_155 75.7% 29.4% -----------------------FNSRLIKVISKPSQKRQSMKNAD 13 7425.XP_001600894_from_33_to_166 72.8% 30.0% -----------------------FLSNRIKVISKPSKKKQSLKNTE 14 45351.JGI206550_from_16_to_149 72.8% 30.0% -----------------------FNSKRIKVISKPSKKKQSLKNAD 15 99883.ENSTNIP00000007897_from_3_to_134 73.4% 29.9% -----------------------FQSRLIKVISKPSQKRQSMRNAD 16 7739.JGI166111_from_17_to_148 71.6% 31.7% -----------------------FCSKKIKVISKPSKKKQSLKNAE 17 4896.SPCC736.08-1_from_179_to_304 63.9% 18.2% ----------------------------ISIVSKPSKKGSKLKISN 18 10228.JGI49676_from_12_to_153 78.7% 31.5% -----------------------FNSKRIKVISKPSKKKQSLKNVD 19 5306.JGI98661_from_4_to_156 89.9% 52.4% -----------------------FPSRPIKVISKPSKKRQSAKNLE 20 51511.ENSCSAVP00000002376_from_14_to_186 92.9% 29.2% -----------------------FHSQRIKVISKPSKKKQTVKNTD 21 135651.CBN08231_from_25_to_156 71.6% 25.0% -----------------------FVSQRIRVTSKPSKK---LKNTD 22 7719.ENSCINP00000025649_from_49_to_194 78.1% 28.4% -----------------------FHSQRIKVISKPSKKKQTVKNTD 23 5270.UM05862.1_from_378_to_565 79.9% 16.7% ANEPIENGSEVLSRLPKELAWASFESAPVTIISKSSKKTAKPRGEL 24 6085.XP_002162622_from_80_to_211 70.4% 30.2% -----------------------FDSKRIKVISKPSKKKQSSKNTE 25 9031.ENSGALP00000006289_from_32_to_162 71.0% 26.1% -----------------------FHSKLIKVISKPSQKKQSLKNTD 26 135651.CBN24462_from_57_to_175 64.5% 22.3% -----------------------FVSKPITIISKPSKKKQ-MKSND 27 135651.CBN14524_from_309_to_428 65.1% 20.7% -----------------------FPSQRISVISKPPKNKKWMKSQH 28 81824.JGI25160_from_375_to_506 70.4% 23.6% -----------------------FPSKPLRVISKPSKKKQSNKSHS 29 29883.JGI300968_from_112_to_245 64.5% 20.1% ------EGSD----PPSGRVWASFDSAPVTIISKPSKKTAKTRNIS 30 5306.JGI26175_from_7_to_140 63.3% 20.4% ------DGSE--PTVPGRLPWASFDSAPVTIISKPSKKTAKTRNIA 31 9600.ENSPPYP00000012350_from_68_to_168 53.3% 17.2% ----------------------------------PSPCRASSRPFP consensus/100% ..................................ss.p....+... consensus/90% .......................F.St.lpllSKPSpKpt..+s.t consensus/80% .......................F.St.IplISKPSpK+pph+stp consensus/70% .......................F.Sp.I+VISKPSKK+pohKNs-