Family alignment for the LH2 domain, displayed in

                      cov    pid   1 [        .         .         .         .         :         .         .         . 80 
 1 G4056403/1-144  100.0% 100.0%     VQIKGSVVLMKKNVLDFNDFQA----------------------SFLDRVHEFLGK--GVSFQLVSAEHGDPDNGNRGKV    
 2 Q43191/1-144    100.0%  61.8%     KKVKGTIVLMKKNVLDFNDVNA----------------------SLLDGVLEFLGK--RVSLQLISVVHADPGNSLQGKR    
 3 Q43440/1-164     98.6%  43.4%     QKIKGTVVLMPKNVLDFNAITSVGKGSAKDTATDFLGKGLDALGHAVDALTAFAGH--SISLQLISATQTD--GSGKGKV    
 4 Q42710/1-142     98.6%  58.3%     NKIKGKVILMRSNVLDFTEFHS----------------------NLLDNFTELLGG--GVSFQLISATHTS--NDSRGKV    
 5 Q41430/1-142     98.6%  57.6%     KKVRGTVVLMEEECLDLTNVGA----------------------SLLDRFHEVIGK--GVSLQLISADHAE--PGCTGKL    
 6 LOX1_SOYBN/1-14  97.9%  50.0%     HKIKGTVVLMPKNELEVNPDGS-----------------------AVDNLNAFLGR--SVSLQLISATKAD--AHGKGKV    
 7 LOX1_ARATH/1-14 100.0%  60.4%     KKVKGTVVLMKKNVLDFNDFNA----------------------SFLDRLHEFLGN--KITLRLVSSDVTDSENGSKGKL    
 8 Q42847/1-147    100.0%  55.8%     AHLKGSVVLMRKNALDFNDFGA----------------------HVMDGVTELLGR--GVTCQLISSTNVDHNNGGRGKV    
 9 O04919/1-155     98.6%  42.0%     DKIKGTLVLMQKNVLDINSLTDPAKI---------LDGALGGFGSILDTLTSFLGN--SVLLQLISSTKPL--TSGEGKL    
10 LOX1_LENCU/1-16  97.2%  38.9%     QKLKGTVILMQKNVLDINALTAAQSPSGIIG--GAFGVVGSIAGSIIDTATAFLGR--SVRLRLISATVAD--ASGKGKV    
11 O24295/1-165     98.6%  38.9%     QKIKGTLVLMPKNVLDFNSVSSVKKKGVLDVAGDVIEAAGSLLGGIVDGATAFLGR--NVSIRLISATKKD--GNGHGLV    
12 LOXA_PHAVU/1-16  98.6%  41.6%     HKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSR--NIAIQLISATKTD--GLGNGKV    
13 Q42846/1-142     97.2%  56.8%     GKIRGTAVLVKSDVLDLGDFHA----------------------SLLDGVHKILGKDDGVSFRLVSATAPDPQNGSRGKV    
14 O24371/1-140     95.8%  32.2%     FKVRAVVTVRNKNKEDLKET----------------------IVKHLDAFTDKIGR--NVTLELISTDMDP--NTKGPKK    
15 P93698/1-135     93.8%  23.6%     VKVKATISVQPTIGGIFSSLAI-----------------------DADDLTDLLGK--SLFVELLSAELDP--KTKLEKK    
16 1246125/1-110    74.3%  10.9%     GRYRVRVVTG---AWLFSGSLN------------------------------------LVRLWLVGEH----------RE    
17 O35936/1-121     76.4%   9.7%     AKCRVRVSTG---EACGAGTWD------------------------------------KVSVSIVGTHG-------ESPL    
18 I49479/1-114     77.1%  11.6%     PSYTVTVATG---SQWFAGTDD------------------------------------YIYLSLIGSAG-------CSEK    
19 I52462/1-111     74.3%  10.1%     GVYRIRVSTG---DSKYAGSNN------------------------------------EVYLWLVGQH----------GE    
20 1101886/1-110    74.3%  12.9%     VKYKILVATG---DSVFAGSAN------------------------------------LVHLWLVGEH----------GE    
21 O75342/1-118     78.5%   8.7%     ATYKVRVATG---TDLLSGTRD------------------------------------SISLTIVGTQ----------GE    
22 O19043/1-111     74.3%  11.5%     GVYRVCVSTG---ASIYAGSKN------------------------------------KVELWLVGQH----------GE    
23 LIPL_HUMAN/1-12  78.5%   5.8%     FHYQVKIHFS---GTESETHTN-----------------------------------QAFEISLYGTV----------AE    
24 YS89_CAEEL/1-12  82.6%   9.4%     YMYVIAVETG---YRMFATTDS------------------------------------TICFNLSGNEGDQ---IFRSFR    
25 O16025/1-115     75.7%   8.7%     AIYNVEVETG---DREHAGTDA------------------------------------TITIRITGAKG-------RTDY    
26 O42181/1-115     77.8%   9.5%     FKYEIQVKTG---WSRGAGTTA------------------------------------HVGISLYGRES-------RSGH    
27 LIP1_HUMAN/1-11  73.6%   8.7%     WRYGVSITLS----GRTATG--------------------------------------QIKVALFGNK----------GN    
28 LIPP_RAT/1-111   72.9%   8.0%     WRYQVTVTLS----GQKVTG--------------------------------------HILVSLFGN----------GGN    
29 E254696/1-113    74.3%   6.7%     WRYKVTVTLS----GEKDPSGN-------------------------------------INVALLGKN----------GN    
30 1BU8/1-107       74.3%   8.3%     WRYKVSVTLS---GAKKLSG--------------------------------------YILVALYGNN----------GN    
31 O24370/1-132     91.7%  26.4%     TGVKAVVTVQKQVNLNLSRG--------------------------LDDIGDLLGK--SLLLWIVAAELDH--KTGIEKP    
32 LOXC_ARATH/1-12  88.2%  22.8%     IKVKGYITAQ---EEFLEGITW---------------------SRGLDDIADIRGR--SLLVELISAKTDQ--RITVEDY    
33 A53054/1-136     89.6%  21.9%     AVATIKVTVG---ELINRSIDI----------------------------RDLIGR--SLSLELCSSELDA--KTGKEKA    
34 P93184/1-133     91.0%  20.5%     TEMKATVTVH---MSKAAGVRD--------------------------FLYDLILK-TWLHVDLVSSELDP--QTGQERE    
35 Q92173/1-125     78.5%   7.7%     FHYQVKVHFF---GKTQLSYTD---------------------------------Q--PMKISLYGIH----------GE    
36 LIPH_HUMAN/1-13  77.8%  10.1%     YHYQLKIQFI---NQTETPIQT------------------------------------TFTMSLLGTK--------EKMQ    
37 P91289/1-118     77.8%   8.0%     GRWEFRLHTL---NSDLGGTTS--------------------------------------HLKIIGY-------GDENWL    
   consensus/100%                    ..h.h.h.h....................................................h.l.u..............    
   consensus/90%                     .hhph.l.h........tt........................................h.h.lhut.............    
   consensus/80%                     hphpsplhh.......hssh.......................................l.ltLhutp..........t.    
   consensus/70%                     h+h+spVshh...shphsshts....................................tlplpLlusp.........tt.    

                      cov    pid  81          .         1         .         .         .         .         :         . 160
 1 G4056403/1-144  100.0% 100.0%     GEAAYLEDWI--TTLTSIQAGESVFNVTFNWDMS-FGTPGAVIVKNFH----------------------HSEFFLKTLT    
 2 Q43191/1-144    100.0%  61.8%     SNPAYLEKWL--TTGTSLVAGESAFDVTFDWDED-IGVPGAFIINNFH----------------------FNEFYLKSLT    
 3 Q43440/1-164     98.6%  43.4%     GNEAYLEKHL--PTLPTLGARQEAFDINFEWDAS-FGIPGAFYIKNFM----------------------TDEFFLVSVK    
 4 Q42710/1-142     98.6%  58.3%     GNKAYLERWL--TSIPPLFAGESVFQINFQWDEN-FGFPGAFFIKNGH----------------------TSEFFLKSLT    
 5 Q41430/1-142     98.6%  57.6%     GKPAFLEKWI--STLTSISAGDATFNVTFDWDES-MGVPGAFIIKNYH----------------------HSQFYLRTVV    
 6 LOX1_SOYBN/1-14  97.9%  50.0%     GKDTFLEGIN--TSLPTLGAGESAFNIHFEWDGS-MGIPGAFYIKNYM----------------------QVEFFLKSLT    
 7 LOX1_ARATH/1-14 100.0%  60.4%     GKAAHLEDWI--TTITSLTAGESAFKVTFDYETD-FGYPGAFLIRNSH----------------------FSEFLLKSLT    
 8 Q42847/1-147    100.0%  55.8%     GAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNH----------------------ASEFFLKTIT    
 9 O04919/1-155     98.6%  42.0%     GKETYLKQAI--TNLPTLGDKQTAFSIEFEYDSS-FGIPGAFKIKNYM----------------------SNEFYLVSLT    
10 LOX1_LENCU/1-16  97.2%  38.9%     SKEAFLEGLL--TSIPTLGDKQSAFSVHFEWDSN-MGTPGAFYIENFMQGG---------------------EFFLVSLT    
11 O24295/1-165     98.6%  38.9%     GKEVFLEKHI--PTLPTLGARQDAFSIYFDWDAD-FGIPGAFYIRNYM---------------------QAHEFFLVSVT    
12 LOXA_PHAVU/1-16  98.6%  41.6%     GKQTFLEKHL--PSLPNLGDRQDAFNVYFEWDEN-FGIPEAFYIKNFM----------------------QSEFFLVSLT    
13 Q42846/1-142     97.2%  56.8%     GKPAHLEEMV--VTMKSTAAGESVFKVTFEWDDS-QGVPGAVIVRNTY----------------------RSEYLLKTLT    
14 O24371/1-140     95.8%  32.2%     SNQAVLKDWS---KKSNLKTERVNYTAEFIVDSN-FGNPGAITVTNKH----------------------QQEFFLESIT    
15 P93698/1-135     93.8%  23.6%     PIQDFAHRTH-------RSPKEVRYLAEFDVPVD-FGEIGAILVENEH----------------------RREMFIKEII    
16 1246125/1-110    74.3%  10.9%     AKLELQLRPA----------RGKEEEFDFDVPED-LGPLQFVKLHKQHTVV-------------------DDAWFCNLIT    
17 O35936/1-121     76.4%   9.7%     VPLDHLG---------KEFSAGAEEDFEVTLPQD-VGTVLMLRVHKAPPEVS-----------LPLMSFRSDAWFCRWFE    
18 I49479/1-114     77.1%  11.6%     HLLDKAFYND--------FERGAVDSYDVTVDEE-LGEIYLVKIEKRKYWL-------------------HDDWYLKYIT    
19 I52462/1-111     74.3%  10.1%     ASLGKLLRPC----------RDSEAEFKVDVSGY-LGPLLFVRVQKWHYLT-------------------DDAWFCNWIS    
20 1101886/1-110    74.3%  12.9%     ADLGKQLRPL----------LGRKTELEVDVPLH-LGRLLAVKLRKQKGLL-------------------DSDWFCKSIT    
21 O75342/1-118     78.5%   8.7%     SHKQLLNHFG------RDFATGAVGQYTVQCPQD-LGELIIIRLHKERYAFF-----------------PKDPWYCNYVQ    
22 O19043/1-111     74.3%  11.5%     VELGSCLRPS----------RNKEEEFKVNVSKY-LGSLLFVKLRKKHFLK-------------------EDAWFCNWIS    
23 LIPL_HUMAN/1-12  78.5%   5.8%     SENIPFTLPE--------VSTNKTYSFLIYTEVD-IGELLMLKLKWKSDSYF-----------SWSDWWSSPGFAIQKIR    
24 YS89_CAEEL/1-12  82.6%   9.4%     SEEDGNWEFP--------FSWGTTDRFVMTTAFP-LGELEYMRLWLDDAGLD-----------------HRESWYCNRII    
25 O16025/1-115     75.7%   8.7%     LKLDKWFHND--------FEAGSKEQYTVQGFD--VGDIQLIELHSDGGGYW----------------SGDPDWFVNRVI    
26 O42181/1-115     77.8%   9.5%     RHLDSRG----------SFARNALDIFHIATDTS-LGNVWKMRIWHDNKGL-------------------SPAWMLQYVL    
27 LIP1_HUMAN/1-11  73.6%   8.7%     THQYSIF--------RGILKPGSTHSYEFDAKLD-VGTIEKVKFLWNNNVI----------------NPTLPKVGATKIT    
28 LIPP_RAT/1-111   72.9%   8.0%     SKQYEVF--------KGSLHPGDTHVKEFDSDMD-VGDLQKVKFIWYNNVI----------------NPTLPKVGASRIS    
29 E254696/1-113    74.3%   6.7%     SAQYQVF--------KGTLKPDASYTNSIDVELN-VGTIQKVTFLWKRSGI----------------SVSKPKMGASRIT    
30 1BU8/1-107       74.3%   8.3%     SKQYEIF--------KGSLKPEARHVRDIDVDIN-VGEIQKVKFLWNA----------------------APTLGASQIT    
31 O24370/1-132     91.7%  26.4%     GIRAYAHRGR-------DVDGDTHYEADFVIPQD-FGEVGAILIENEH----------------------HKEMYVKNIV    
32 LOXC_ARATH/1-12  88.2%  22.8%     AQRVWAE------------APDEKYECEFEMPED-FGPVGAIKIQNQY----------------------HRQLFLKGVE    
33 A53054/1-136     89.6%  21.9%     TVRSYAHNVD------DDDHSVVTYEADFDVPSG-FGPIGAIIVTNEL----------------------RQEMFLEDIN    
34 P93184/1-133     91.0%  20.5%     PISGAVKHSG------RVDDEWDMYEATFKVPAS-FGPIGAVQVTNYH----------------------HSEMLLGDIE    
35 Q92173/1-125     78.5%   7.7%     KENIPYIMPT--------LNTNSTVSFLLTTDAD-IGELLMVKLLWEKDTLI------------SWPWWNSDTFHIRKLR    
36 LIPH_HUMAN/1-13  77.8%  10.1%     KIPITLGKGI---------ASNKTYSFLITLDVD-IGELIMIKFKWENSAVWANVWDTVQTIIPWSTGPRHSGLVLKTIR    
37 P91289/1-118     77.8%   8.0%     ADDIPNDSLL----------RDPSQVPRIQVDFGNIGRLQKVRFEIQPAGD-------------------QPNYYLEYVE    
   consensus/100%                    ............................h.......G...hh.h.............................hhh..h.    
   consensus/90%                     .....................t....h.hth....hG...hhhh............................thhh..l.    
   consensus/80%                     st...h.............tttst.phphphs.s.hG...hhhlp.........................t.thhhp.lp    
   consensus/70%                     up.shh.t...........ttpsthphphphs.s.hG..tthhlpp.t......................pspaalpplp    

                      cov    pid 161          .         .         .         ] 200
 1 G4056403/1-144  100.0% 100.0%     LEDF---PAKDRIHFVCNSWVYPTSN----YKYDRIFFVN    
 2 Q43191/1-144    100.0%  61.8%     LEDV---PNHGNVHFVCNSWVYPAKK----YKSERIFFAN    
 3 Q43440/1-164     98.6%  43.4%     LEDI---PNHGTINFVCNSWVYNFKS----YKKNRIFFVN    
 4 Q42710/1-142     98.6%  58.3%     LDDV---PGYGRVHFDCNSWVYPSGR----YKKDRIFFAN    
 5 Q41430/1-142     98.6%  57.6%     LEDV---PGHGELHFVCNSWVYPAHR----YKYDRVFFAN    
 6 LOX1_SOYBN/1-14  97.9%  50.0%     LEAI---SNQGTIRFVCNSWVYNTKL----YKSVRIFFAN    
 7 LOX1_ARATH/1-14 100.0%  60.4%     LEDV---PGHGRVHYICNSWIYPAKH----YTTDRVFFSN    
 8 Q42847/1-147    100.0%  55.8%     LDNV---PGRGTIVFVANSWVYPQAK----YRYNRVFFAN    
 9 O04919/1-155     98.6%  42.0%     LDDI---PNLGTIHFVCNSWIYNAKN----YQTDRIFFAN    
10 LOX1_LENCU/1-16  97.2%  38.9%     LDDV---PNVGSIKFACNSWIYNDKK----YQSDRIFFAN    
11 O24295/1-165     98.6%  38.9%     FDDI---PNHESVQFVCNSWVYNFKS----YKKDRIFFSN    
12 LOXA_PHAVU/1-16  98.6%  41.6%     LEDI---PNHGTIHFVCNSWVYNAKS----YKRDRIFFAN    
13 Q42846/1-142     97.2%  56.8%     LHGV---PGKGTVVFVANSWIYPN--------VDRLFFAN    
14 O24371/1-140     95.8%  32.2%     IEGF----ACGPVHFPCNSWVQPKKD----HPGKRIFFSN    
15 P93698/1-135     93.8%  23.6%     LDGF----ELGPVRFTCESWLHPKKD----NPVKRVFFPD    
16 1246125/1-110    74.3%  10.9%     VQGP---GTSAEAVFPCYRWVQGE--------GILSLPEG    
17 O35936/1-121     76.4%   9.7%     LEWL----PGAALHFPCYQWLEGA--------GELVLREG    
18 I49479/1-114     77.1%  11.6%     LKTP----HGDYIEFPCYRWITGE--------GEIVLRDG    
19 I52462/1-111     74.3%  10.1%     VKGP--GDQGSEYMFPCYRWVQGR--------SILSLPEG    
20 1101886/1-110    74.3%  12.9%     VQGP---GTQGEAFFPCYSWVQGK--------ETICLTEG    
21 O75342/1-118     78.5%   8.7%     ICAP----NGRIYHFPAYQWMDGY-E----TLALREATGK    
22 O19043/1-111     74.3%  11.5%     VQAL--GAAEDKYWFPCYRWVVGD--------GVQSLPVG    
23 LIPL_HUMAN/1-12  78.5%   5.8%     VKAG---ETQKKVIFCSREKVSHLQK----GKAPAVFVKC    
24 YS89_CAEEL/1-12  82.6%   9.4%     VKDL---QTQDIYYFPFNNWLGTK-N----GDGETERLAR    
25 O16025/1-115     75.7%   8.7%     IISS---TQDRVYSFPCFRWVIKD----------MVLFPG    
26 O42181/1-115     77.8%   9.5%     VKDL---QTGSSSYFLVEEWLSVD------NEKTDGHVEI    
27 LIP1_HUMAN/1-11  73.6%   8.7%     VQKG---EEKTVYNFCSEDTVRED--------TLLTLTPC    
28 LIPP_RAT/1-111   72.9%   8.0%     VERN----DGRVFNFCSQDTVRED--------VLLTLSAC    
29 E254696/1-113    74.3%   6.7%     VQSG---KDGTKYNFCSSDIVQEN--------VEQTLSPC    
30 1BU8/1-107       74.3%   8.3%     VQSG---VDGKEYNFCSSDTVRED--------VLQSLYPC    
31 O24370/1-132     91.7%  26.4%     IDGF----VHGKVEITCNSWVHSKFD----NPDKRIFFTN    
32 LOXC_ARATH/1-12  88.2%  22.8%     LKLP-----GGSITFTCESWVAPKSV----DPTKRIFFSD    
33 A53054/1-136     89.6%  21.9%     LTASDGAGNSTVLPIRCNSWVQPKSVGDEGTPSKRIFFAN    
34 P93184/1-133     91.0%  20.5%     VFPT--GQEESAVTFHCKSWIDPSHC----TPDKRVFFPA    
35 Q92173/1-125     78.5%   7.7%     IKSG---ETQSKIIFSAKESEFSYLSRG---GEAAVFVKD    
36 LIPH_HUMAN/1-13  77.8%  10.1%     VKAG---ETQQRMTFCSENTDDLLLRPT----QEKIFVKC    
37 P91289/1-118     77.8%   8.0%     AQDL---DTRERCVLMVNNWLLKEATPG--YRKFQSFREI    
   consensus/100%                    h.........t...h...p.................h...    
   consensus/90%                     lpt.....t.t.h.a.s.phl...............h..t    
   consensus/80%                     lps.....stt.h.Fss.pWl..t..........hhhh.s    
   consensus/70%                     lcsh....stsphhFsspsWl.st........ttphhhss