cov pid 1 [ . . . . : . . . 80 1 UPAR_BOVIN/2-0 100.0% 100.0% LECASCSST---DLSCERGWDQTMQ--CLKSRDQCVDVITHRSLKEN---PGDERHIRGCGIL----PGCPGPT------ 2 UPAR_HUMAN/2-0 100.0% 61.3% LECISCGSS---DMSCERGRHQSLQ--CRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYL----PGCPGSN------ 3 UPAR_MOUSE/2-0 96.7% 54.8% LECASCTSLD---QSCERGREQSLQ--CRYPTEHCIEVVTLQSTERSLK---DEDYTRGCGSL----PGCPGTA------ 4 UPAR_BOVIN/3-0 95.6% 21.7% LQCYSCEGNG--AHRCSSEETFLID--CRGPMNQCLEATGTKGLRN------PSYTIRGCAAP----SWCQSLH------ 5 UPAR_HUMAN/3-0 95.6% 20.7% RQCYSCKGNS--THGCSSEETFLID--CRGPMNQCLVATGTHEPKN------QSYMVRGCATA----SMCQHAH------ 6 UPAR_MOUSE/3-0 96.7% 19.2% FQCYSCEGNN--TLGCSSEEASLIN--CRGPMNQCLVATGLDVLGN------RSYTVRGCATA----SWCQGSH------ 7 UPAR_HUMAN/1-9 88.9% 14.3% LRCMQCKTNG----DCRVEE-------CALGQDLCRTTIVRLWEEGEE----LELVEKSCTHS----EKTNRTLS----- 8 UPAR_MOUSE/1-9 88.9% 17.8% LQCMQCESNQ----SCLVEE-------CALGQDLCRTTVLREWQDDRE----LEVVTRGCAHS----EKTNRTMS----- 9 UPAR_BOVIN/1-9 88.9% 16.3% LRCLQCENTT----SCSVEE-------CTPGQDLCRTTVLSVWEGGNE----MNVVRKGCTHP----DKTNRSMS----- 10 CD59_HSVSA/1-8 82.2% 15.2% LQCYNCSHST---MQCTTST------SCTSNLDSCLIAKAG------------SGVYYRCWKF----DDCSFKR------ 11 CD59_CERAE/1-8 82.2% 14.1% LQCYNCPNPT---TDCKTAI------NCSSGFDTCLIARAG------------LQVYNQCWKF----ANCNFND------ 12 CD59_RAT/1-83 82.2% 15.2% LRCYNCLDPV---SSCKTNS------TCSPNLDACLVAVSG------------KQVYQQCWRF----SDCNAKF------ 13 G2828535/1-84 83.3% 18.2% LTCYHCFQPV--VSSCNMNS------TCSPDQDSCLYAVAG------------MQVYQRCWKQ----SDCHGEI------ 14 LY6E_MOUSE/1-9 91.1% 18.0% LMCFSCTDQKN-NINCLWPV------SCQEKDHYCITLSAAAGFGNV---NLGYTLNKGCS------PICPSEN------ 15 Q16553/1-92 91.1% 21.0% LMCFSCLNQKS-NLYCLKPTI------CSDQDNYCVTVSASAGIGNL--VTFGHSLSKTCS------PACPIPE------ 16 THYB_MOUSE/1-8 83.3% 15.8% LRCHVCTNSA----NCKNPQ------VCPSNFYFCKTVTSVE-------PLNGNLVRKECA------NSCTSDYS----- 17 E48A_HUMAN/1-8 84.4% 16.0% LRCHVCTSSS----NCKHSV------VCPASSRFCKTTNTVE-------PLRGNLVKKDCA------ESCTPSY------ 18 LY6A_MOUSE/1-9 91.1% 20.0% LECYQCYGVPF-ETSCPSIT-------CPYPDGVCVTQEAAVIVDSQ----TRKVKNNLCL------PICPPNI------ 19 LY6F_MOUSE/1-9 91.1% 18.0% LECYNCLGVSL-GIACKSIT-------CPYPDAVCISQQVELIVDSQ----RRKVKNKLCF------PFCPANL------ 20 LY6G_MOUSE/1-9 91.1% 20.0% LECYNCIGVPP-ETSCNTTT-------CPFSDGFCVALEIEVIVDSH----RSKVKSNLCL------PICPTTL------ 21 LY6C_MOUSE/1-8 88.9% 19.2% LQCYECYGVPI-ETSCPAVT-------CRASDGFCIAQNIELIEDSQ----RRKLKTRQCL------SFCPAGV------ 22 Q63316/1-93 91.1% 18.8% LNCYNCTMIPF-GNTCSSTA------TCPYPDGVCAIQVAEVVMSSV----RQKVKDHICL------PVCPTSP------ 23 Q63318/1-92 91.1% 22.0% LKCYSCIEVPL-NANCSTAT-------CPYSDGVCVSQVLEAVEGSV----RRTAKSNLCL------PICPKFP------ 24 Q90986/1-90 87.8% 18.8% LICFSCSDASS-NWACLTPV------KCAENEEHCVTTYVGVGIGG----KSGQSISKGCS------PVCPSAG------ 25 Q99445/1-95 87.8% 14.2% LRCHDCAVIN--DFNCPNIR------VCPYHIRRCMTISIRINS-------RELLVYKNCT------NNCTFVYAAEQPP 26 E1228108/1-96 96.7% 23.2% LECYSCVQKA--DDGCSPHKMKTVK--CGPGVDVCTEAVGAVESIH----GQFSVAVRGCG------SGIPGKNDR---- 27 Q90358/1-96 94.4% 13.9% RSCDFCHNIG---KDCDGYEEE-----CSSPEDVCGKVLLEISSAS----LSVRTVHKNCFSS----SICKLGQFD---- 28 P91987/1-91 91.1% 12.5% LDYFTNYENL--IKNESYYDEGIQ---CRG--HFCFITIVDHTS-------SNNSYYKGCIT-----ANEQGEH------ 29 Q20401/1-111 97.8% 15.0% YDCFSGFVGRMQASVEENHFHINDTAMCSA--MYCIKVILHSALDDD--GIFQQGISSRCAYTGGDRQVCQKSEGK---C consensus/100% h.h..s.........p...........C......Ch...................h...C.................... consensus/90% h.Ch.C........tC...........C....t.Ch...h...............h.p.C.........s.......... consensus/80% LpChpC.t......sC...........C..s.t.Ch.h.ht............p.h.ptCh......s.C..t....... consensus/70% LpCasChsss....sCps.p.......C..s.phChtshst....t.......phh.+tCh......shCsts....... cov pid 81 . 1 . ] 118 1 UPAR_BOVIN/2-0 100.0% 100.0% --GFHNNHTFH--FLRCCNTTKCN------AGSVLELQ 2 UPAR_HUMAN/2-0 100.0% 61.3% --GFHNNDTFH--FLKCCNTTKCN------EGPILELE 3 UPAR_MOUSE/2-0 96.7% 54.8% --GFHSNQTFH--FLKCCNYTHCN------GGPVLDLQ 4 UPAR_BOVIN/3-0 95.6% 21.7% --VAEAFDLTH-VNVSCCTGSGCN-------HPARDDQ 5 UPAR_HUMAN/3-0 95.6% 20.7% --LGDAFSMNH-IDVSCCTKSGCN-------HPDLDVQ 6 UPAR_MOUSE/3-0 96.7% 19.2% --VADSFPTHLNVSVSCCHGSGCNSPTGGAPRPGPAQL 7 UPAR_HUMAN/1-9 88.9% 14.3% ---YRTGLKITSLTEVVCGLDLCNQ---GNSGRAVTYS 8 UPAR_MOUSE/1-9 88.9% 17.8% ---YRMGSMIISLTETVCATNLCNRPRPGARGRAFPQG 9 UPAR_BOVIN/1-9 88.9% 16.3% ---YRAADQIITLSETVCRSDLCNKP---NPGRDATVS 10 CD59_HSVSA/1-8 82.2% 15.2% ---ISNQLSETQLKYHCCKKNLCNVN-KGIENIKRTIS 11 CD59_CERAE/1-8 82.2% 14.1% ---ISTLLKESELQYFCCKKDLCNFN-EQLENGGTSLS 12 CD59_RAT/1-83 82.2% 15.2% ---ILSRLEIANVQYRCCQADLCNKS-FEDKPNNGAIS 13 G2828535/1-84 83.3% 18.2% ---IMDQLEETKLKFRCCQFNLCNKS-DGSLGKTPLLG 14 LY6E_MOUSE/1-9 91.1% 18.0% ---VNLNLGVASVNSYCCQSSFCNFS-AAGLGLRASIP 15 Q16553/1-92 91.1% 21.0% ----GVNVGVASMGISCCQSFLCNFS-AADGGLRASVT 16 THYB_MOUSE/1-8 83.3% 15.8% ---QQGHVSSGSEVTQCCQTDLCNERLV-SAAPGHALL 17 E48A_HUMAN/1-8 84.4% 16.0% --TLQGQVSSGTSSTQCCQEDLCNEKLH-NAAPTRTAL 18 LY6A_MOUSE/1-9 91.1% 20.0% -ESMEILGTKVNVKTSCCQEDLCNVAVP-NGGSTWTMA 19 LY6F_MOUSE/1-9 91.1% 18.0% -ENMEILGTTVNVNTSCCKEDLCNAPFS-TGGSTWTMT 20 LY6G_MOUSE/1-9 91.1% 20.0% -DNTEITGNAVNVKTYCCKEDLCNAAVP-TGGSSWTMA 21 LY6C_MOUSE/1-8 88.9% 19.2% ----PIKDPNIRERTSCCSEDLCNAAVP-TAGSTWTMA 22 Q63316/1-93 91.1% 18.8% -QTTEILGTVVDMKISCCNTDLCNAAGP-TGGSTWTMA 23 Q63318/1-92 91.1% 22.0% -QRTEILGTVVYTKVSCCNTDLCNAAGP-TGGSTWTVA 24 Q90986/1-90 87.8% 18.8% -----INLGIAAASVYCCDSFLCNISGSSSVKASYAVL 25 Q99445/1-95 87.8% 14.2% EAPGKIFKTNSFYWVCCCNSMVCNAGGP--TNLERDML 26 E1228108/1-96 96.7% 23.2% --GLDLHGLLAFIQLQQCTEDRCNAKLN--LTLRGLNP 27 Q90358/1-96 94.4% 13.9% --VNIGHHSYIRGRINCCEKELCEDQPFPGLPLSKPNG 28 P91987/1-91 91.1% 12.5% -RIQLGHSYLNDVPYYICDTDFCNLN----IETTLKVA 29 Q20401/1-111 97.8% 15.0% QDISFYDGMKGNFSFCCCKENKCNVATQTELNSIYSMN consensus/100% .................Ct..hCp.............. consensus/90% ................sCp..hCN.......t..h... consensus/80% ..........h...h.CCptshCN.......s.thsh. consensus/70% ...hph..thhthphpCCppshCN......hs.shsht