cov pid 1 [ . . . . : . . . 80 1 Q13219/1-150 100.0% 100.0% DAFTLQVWLRAEGGQRSPAVITGLYDKCSYISRDRGWVVGIHTI------SDQDNKDPRYFFSLKT--DRARQVTTINAH 2 O52973/1-150 84.7% 15.6% DALTIEAWVAPRSYEWGDGNKL-------------SAIVNQSDQDKA----------EGFALGMYR-----HGTWSLQAG 3 O86584/1-155 82.0% 13.2% DSFTVSAWAYLTDTSQT------------------RVVMAAPG---------TYGSAFTLYYSA-----SYKKWVFNRTA 4 BAA34817/1-136 86.0% 14.0% RQVTLDMWVKPLSWQGSGTFLSKGD---------KQWALQMPD-----------PEHVEFFVYG------EDDWHTARVR 5 O75445/1-138 86.7% 15.8% ASFTLAVWLKPEQQGVMCVIEK----------TVDGQIVFKLTISE---------KETMFYYRT------VNGLQPPIKV 6 CAA22361/1-141 82.7% 12.6% GDFTASLWFRYSAADGEQ-----------------PLLWMGGIGTT----------QPQVWLRAEPDAGRVQGLITARDG 7 CAA22766/1-131 84.7% 13.6% GSLTLEAWVTPHVTGYHQPIIAKGD---------TQYALKQNG------------RTLEFFIHS------EGQWITANWT 8 BAA36343/1-133 81.3% 11.8% RSFTVAAWVRLSAVPGVF-----------------ATAVSQDSADA-----------SGFYLQYSS---EDQGWAFARPG 9 P73139/1-135 83.3% 15.0% QAFAIEFWFKLPNLPRESIN-------------LVSALGLFGLGLEVDPNDPNAPPKLTFGLGNDDQ----SQIQASETF 10 P74440/1-121 77.3% 12.3% QGFSVEFWFKLPTSDGVVGLA--------------NLAGVFDLSLN--------EDSLTFTLNN------GSNPQISGTV 11 O86584_1/1-173 86.0% 9.8% GSFTVSARVQLDSAKLASKPVGY------------EALVAGQQASA---------GESSWALWAVKPADGVYQWKFTRTA consensus/100% tthshthhh............................hh....................hhh..........t......h consensus/90% tsholthWht..s..h...................thhh...................thhh.........tth...t.h consensus/80% tuhTlphWhp..shth...................thhh.................t.tahht........pth.hspsh consensus/70% tuFTlphWhp.pshtht..................thhhhhst.............p.pahlts.......pthhhspss cov pid 81 . 1 . . . . : . 160 1 Q13219/1-150 100.0% 100.0% RSYLP----------------GQWVYLAATYDG-------------------QFMKLYVNG-------AQVATSGEQ--- 2 O52973/1-150 84.7% 15.6% IGGRWIQAWVND----HPLEKYKWNYVAATFDK-----------------EDGMMRLYLNG-------EEVASQATPAG- 3 O86584/1-155 82.0% 13.2% GDVKDKPVYLRSLGDATAPPLKVWTHLAAVFDTKKD-----------TNKANDTIQLFVNGRPQGEPVVLDGVSTAYQ-- 4 BAA34817/1-136 86.0% 14.0% IPDDWW---------------GNWHRLSGVYDG-------------------EQVRLHLDG-------EQVAATPYRG-- 5 O75445/1-138 86.7% 15.8% MTLGRILV-------------KKWIHLSVQVHQ-------------------TKISFFING-------VEKDHTPFNAR- 6 CAA22361/1-141 82.7% 12.6% ATAPR----------------SAWVRTDRAYDDGRWHRLT-------LRRGGGRLTLFVDG-------SAAADAADVP-- 7 CAA22766/1-131 84.7% 13.6% VPEDWT---------------GREHHLAGVFDA-----------------DAGTLTLYVDG-------VERATRTTDR-- 8 BAA36343/1-133 81.3% 11.8% LRAVGRTAPAA----------HVWTHLTGVCDG-----------------PARKLHLYVNG-------VQEAVVEDTG-- 9 P73139/1-135 83.3% 15.0% AT-------------------DVWYYVVGTYDG-----------------SSQNLSLYLNG-------VLAGTLDDVE-- 10 P74440/1-121 77.3% 12.3% TT-------------------GNWHYVVGTYDP-----------------VKQILDLYLDG-------QLVNTLENIA-- 11 O86584_1/1-173 86.0% 9.8% VGADGKVTQSAEAPGGDIAETDTWVQVTGVFDAQEPWEWTDPADSAKTETRYGRLHLYVG--------EFDQPSETASGF consensus/100% h.........................hsh.hc....................t.hphals...........t........ consensus/90% hs...................t.WhhlssshDt...................t.hpLalsG..........ss....... consensus/80% hs...................t.WhhlsusaDs...................thlpLalsG..........ss.tt.t.. consensus/70% hs...................ttWhalsusaDs...................tplpLalsG.........sustss.t.. cov pid 161 . . . 2 . ] 212 1 Q13219/1-150 100.0% 100.0% --VGGIFSPLTQKC--KVLMLGGSALNHNYRG-----YIEHFSLWKVARTQR 2 O52973/1-150 84.7% 15.6% VPISPSGESLIVGKNNKPVELAGLFSFNMFSG-----LIDEVKVHNRALTNG 3 O86584/1-155 82.0% 13.2% --PWVSSGGLQIG-----RSLVGGAWGEHFRG-----RLDEVNVWQRVLTPD 4 BAA34817/1-136 86.0% 14.0% ---EIAANTMYTAS----IGRNQEKHGDSFAGRTAHAVVDSVRVYDTALTRQ 5 O75445/1-138 86.7% 15.8% -TLSGSITDFASG---TVQIGQSLNGLEQFVG-----RMQDFRLYQVALTNR 6 CAA22361/1-141 82.7% 12.6% ---GSVSRNSPFG----VHIGERMDGRARFTG-----AVDDVQVWNSALTDT 7 CAA22766/1-131 84.7% 13.6% ---RPSSNTAPLA-----LASDADNQVREFSG-----TVRRARVYARALGAA 8 BAA36343/1-133 81.3% 11.8% --PAPATGAFMIG-----RASFDGQPRDFFPG-----AIRDVRAFDRALGPA 9 P73139/1-135 83.3% 15.0% ------FDPFPTA----AALALAGASTANNPV-----YLDEVAFYPKALTAS 10 P74440/1-121 77.3% 12.3% ------FANLPQS----GTLTLAGSGG---SV-----YLDEFAFYNSILSYV 11 O86584_1/1-173 86.0% 9.8% TTPQYGAGALAVG-----RGSRGGTTGHHLPG-----ALEELRVWTGAMSAD consensus/100% .......ts...t.........t........s.....hhpphtha..hhs.. consensus/90% .......tsh..u.....h...t.t.ht...s.....hlcchthat.shs.t consensus/80% .......ssh..u.....hh..s.t.ht.hsG.....hlcchphaptALo.t consensus/70% ...t.shssh.hu.....hht.utsttppasG.....hl--hplaspALoss