cov    pid  1 [        .         .         .         .         :         .         .         . 80 
 1 7460.XP_001121654_from_3_to_121        100.0% 100.0%    AELRKFLY----GLLSSVEG-LHSILITDRDGVPVVSV--ADETTPELAMRASFLST-FGMATDQGSKLG----LGKNKT    
 2 99883.ENSTNIP00000009796_from_3_to_121 100.0%  60.5%    DDLKRYLY----KQLQSVEG-LHAIVVTDRDGVPVVKV--ANDNAPVPALRPGFLST-FALATDQGSKLG----LSKNKS    
 3 7739.JGI268762_from_3_to_121           100.0%  53.8%    EDLKRYIF----RLMSKVDG-LYGIAITDRDGVPVLKV--SNEHAPEMALRPGFLVT-FSMAADQGSKMG----LGKNQR    
 4 8364.ENSXETP00000056222_from_3_to_121  100.0%  63.0%    EELRRFLY----KKLTSVDE-LHAIVVSDRDGVPVIKV--ANENAPEHALRPAFLST-FALATDQGSKLG----LSKNKS    
 5 121224.XP_002424435_from_311_to_429    100.0%  63.0%    HEMKKYLF----FLLGKVDG-LFCILITDRDGVPILDV--ATNKAPDYAMKPSFIST-FGKTTDQGSKLG----LGKNKF    
 6 7070.XP_968325_from_3_to_121           100.0%  60.5%    EEVKNNLQ----ELLSKVSG-LYGVVITDRDGVHLLKV--NSDKAPEHAMRPNFIST-FGLAVDQGSKLG----LGKTNT    
 7 7244.FBpp0232115_from_3_to_123         100.0%  54.5%    DDIKKYFN----GLLQKVSG-LYVIQITDRDGVPLLRVSHSQEKNVDFALMPSFIPT-FTTACDQASKLG----LGRNKT    
 8 45351.JGI239924_from_3_to_121          100.0%  49.6%    ERIHQYFE----DIMRRFDG-VLGIIVTDRDGVPVVKV--ADARIPGTALRSSYLAT-FATATEQASKLG----LSKNKN    
 9 6085.XP_002156520_from_3_to_121        100.0%  50.4%    AVLGNYFQ----GLLSNIDG-GLAFFVTDRNGVPIVKI--TNSKCPESATRASFLST-FAAATDQASKLG----LSKNKR    
10 7176.CPIJ009430-PA_from_3_to_122       100.0%  46.7%    DDVKRFFQ----NMLQRVSG-LRCVMVTDRDGVPLVNL--EKEKLSEIVMKPAFLST-FTLAAEQSNKLG----LGKNRN    
11 7165.AGAP000997-PA_from_3_to_121       100.0%  48.7%    DDVKRFFH----NIRKRVAG-LNCIIITDRDGVPLMKV--GDDKSLGMIMKPSFHTT-FTMATEQSNKLG----LGRNRN    
12 67593.JGI141412_from_15_to_136         100.0%  27.9%    PVLQEKLN----DVLSRYDA-LEAILVCTSEGVPLLKVTAEEKSELSYEYTETVLPTVFAGAAEQIGKLK----FGAVQS    
13 135651.CBN03595_from_1_to_120          100.0%  26.7%    MNAQQELE----ELMLTYEG-VCAIFITDHDGGVVLNVG-LPSTLDNSRFRQQLIVS-HITTIPQIHKLN----MGGHQT    
14 281687.CJA04743_from_1_to_120          100.0%  25.0%    MNVQQSLE----ELMLAYEG-ICAIFITDHDGGLILNVG-LPATLDNSKFRQQLILS-HLTTIPQIHKLK----MGGHKT    
15 10228.JGI59357_from_37_to_154           99.2%  36.1%    DQLQSDLL----KLISRIEG-LYSVAVSDKDGVPIVYV--TSQNIPEVDVK-GILPA-INGIIDQASKLS----ITESKS    
16 6182.Q86EA8_from_7_to_126               96.6%  29.8%    DHLKRF--------LSEVDG-ILGIFVADKDGVVVASA--TMDDMPDQARSPYVTAA-FIVSLQQVNKLD----LGELEW    
17 44689.DDBDRAFT_0217502_from_2_to_125   100.0%  27.4%    EKVDEFLEYIKVSILDKSIV-DTSLILSDRDGFVLGKII-DKSSSADNVIDNSLIST-FSSATDQASKLH----AGNNKS    
18 2850.JGI17372_from_13_to_137           100.0%  21.6%    NTLQQIII----RTNQAGAG-IRAILLSTTEGVPLGRLY-ATDQPLNEDVLASIESV-WAPASKQLPVLG----LEKAQQ    
19 5722.A2DN99_from_7_to_122               97.5%  24.4%    NTPTTFLD----NLAKSVHG-VKKIYISDSHGAIL-----AESSAPKNEKEEKIVRS-FPTYNDRLGKLS----YGNNKS    
20 81824.JGI35549_from_2_to_115            95.8%  27.7%    MELSDVLR----QLVERADG-CASIVVSDRDGVSIVQA--SSDKIRLPSGTPSYFAV-AAQAAEHLSKMG----HGGVST    
21 392500.Swoo_1512_from_121_to_237        95.8%  17.2%    DRYQEHLV----TLVEQYDY-INDIYLIDTDGNILYSVE-KNADLGENIFSPALRYSHFSASAQDS--------LNTGEV    
22 444157.Tneu_0108_from_7_to_117          88.2%  21.6%    EELSLFLS--------RTGGDVLGAVMARRDGLPVASA--------APGMDPKAISALAALALGTLRKVGDELKIGGVRQ    
23 6182.Q5BYY1_from_59_to_153              79.0%  20.8%    DHLKRF--------LSEVDG-ILGIFVADKDGVVVASA--TMDDMPDQARSPYVTAA-FIVSLQQVNKLD----LGELEW    
24 5911.XP_001031670_from_102_to_221       99.2%  23.1%    SELNNFLK----KYIEKFDF-INAIVLTDKEEIQVCAS--YRQDEEKYNSAAQMLSTFITQRNEHLQKLN----NTKAKA    
25 397948.Cmaq_0617_from_9_to_129          95.8%  24.6%    NGLNDLLE----SYLRDMEGDVVSVVVSDINGLPI-----AYKTVINLDINS--LSALCALTINHMRKISGETKLGDVEY    
   consensus/100%                                          ...t............t.......h.h.p.pt..l.....................s.h.....p..........tt.p.    
   consensus/90%                                           .thpp.h.......h.phth.h.slhlscpcGh.lh......tp..t..ht..hh.s.h..t.tp.tKht....hst.p.    
   consensus/80%                                           tplpphh.....thhpphpG.lhslhloD+-Glslhph..t.pp..p.thpsthhss.ashshpphpKLs....hupspt    
   consensus/70%                                           pplpphl.....phhpphcG.lhuIhloD+DGlslhpl..sppphsp.shpsthlso.ashuscQhsKLs....lupscp    

                                             cov    pid 81          .         1         .         .         .         .  ] 143
 1 7460.XP_001121654_from_3_to_121        100.0% 100.0%    IICMYSSYQ-VVQMNK-----LPLVISFIASHNC-NTGHILS-----LESKIDPILSNLKNAV    
 2 99883.ENSTNIP00000009796_from_3_to_121 100.0%  60.5%    IICYYNDYQ-IVQFNR-----LPLVISFIARSSA-NTGLIMS-----LENELAPLIEELKQVV    
 3 7739.JGI268762_from_3_to_121           100.0%  53.8%    IVCMYSAYQ-VVHFNK-----APLMVTLVANSTA-NTGMILS-----LEDELTDALQDLRQAV    
 4 8364.ENSXETP00000056222_from_3_to_121  100.0%  63.0%    IICYYSTYQ-VVQFNQ-----LPLVVSFIASCNA-NTGLILS-----LEKELGSLFKELRQVV    
 5 121224.XP_002424435_from_311_to_429    100.0%  63.0%    VISIYSNHQ-VVQINK-----LPMVITFIASKDS-NTGHILS-----LEELIDPLLNDLKCAI    
 6 7070.XP_968325_from_3_to_121           100.0%  60.5%    LICVYSQYQ-VIQMNK-----LPLIVTFIASDTC-NTGHILA-----IEKQLDPIVSNLALAV    
 7 7244.FBpp0232115_from_3_to_123         100.0%  54.5%    IISMYSNYQ-VVQMNK-----LPLILTFVGAEDC-NTGHILA-----LEHQVDGYLEDIKLAV    
 8 45351.JGI239924_from_3_to_121          100.0%  49.6%    IICTFPSYQ-VVHFNY-----LPLVVSVIATSQA-NTGVILS-----LETDFRNFVKDLKSTV    
 9 6085.XP_002156520_from_3_to_121        100.0%  50.4%    MICMYSSYQ-VVMFNY-----LPIVVTVIADSSA-NTGMILE-----METEFSDVIEKMKSTI    
10 7176.CPIJ009430-PA_from_3_to_122       100.0%  46.7%    IISVYADCI-VIQMNK-----LPFVVTFIGTENCLNIGLILA-----MDQQIDTMLEELKTAV    
11 7165.AGAP000997-PA_from_3_to_121       100.0%  48.7%    IISVYTGYQ-VVQMNK-----LPLLVTFIGTESC-NIGHILA-----LDQQIELVLDEVKVAV    
12 67593.JGI141412_from_15_to_136         100.0%  27.9%    VTAFFDDVV-LIHMNH-----APLVITLVAPNSP-HIGALHA-----LASELRPALTPLKKCV    
13 135651.CBN03595_from_1_to_120          100.0%  26.7%    TFAMYESHQ-IAIHSI-----AKYYFIVHAGTNA-NTGMMLA-----MRDKLTPIATHMMTVC    
14 281687.CJA04743_from_1_to_120          100.0%  25.0%    TFAMYESQQ-IAIHSL-----CKYYFIVHAGPNA-NAGSMLA-----MREKLVAIANQMMSVC    
15 10228.JGI59357_from_37_to_154           99.2%  36.1%    LVAQYKSYQ-VILINR-----SPVYISFVTARKV-NTGLILT-----LDDDVMDILGDIKSVI    
16 6182.Q86EA8_from_7_to_126               96.6%  29.8%    MITSYQEMV-ICQFHFTCRLALPLFLTVVGSSEC-NIGAVIA-----LEPSIRPLLNRLAPEA    
17 44689.DDBDRAFT_0217502_from_2_to_125   100.0%  27.4%    IVSFFEDRI-IVHINV-----SNVILSIITDTES-NVGLILG-----SQDDLIRSLTSLSNSI    
18 2850.JGI17372_from_13_to_137           100.0%  21.6%    VTAIYDHGI-LIHVYQ-----TPVIVTILCNPQS-NIGAIRSSGIPLLKEVLEPLCTTLNNSL    
19 5722.A2DN99_from_7_to_122               97.5%  24.4%    IIVECNDTS-YVMCET-----ESFFITFVCSKDA-NFSLLSE-----FPNDMSGFLTQLRSYV    
20 81824.JGI35549_from_2_to_115            95.8%  27.7%    IAVRYDKCQ-VVHFAL-----GAIVVSAIALPDA-NT----------VTGRCQPCITVSHNSS    
21 392500.Swoo_1512_from_121_to_237        95.8%  17.2%    SFSSIEHYQ--ISDNP-----ISSFITLSMFNEFGKTVGIFA-----IQLQFERILKSLNLSV    
22 444157.Tneu_0108_from_7_to_117          88.2%  21.6%    VVAYYDSRV-IVMWPA-----RELYIIAVANADA-NIGLIFL--------ELERLAKRLA-EL    
23 6182.Q5BYY1_from_59_to_153              79.0%  20.8%    MITSYQEMVSIIRHRY--------------NSHC-LISS-----------------NCYKYCC    
24 5911.XP_001031670_from_102_to_221       99.2%  23.1%    ITFMYTDH--LIYMEL----WENLKICMFCVKDA-NLPFINK-----IVEDMKESLSQLNKAI    
25 397948.Cmaq_0617_from_9_to_129          95.8%  24.6%    AIVSYSGYVLYIEYIY-----GDLLLMVVANNNA-NMGLITY-----VTGKYAEYISNLIKST    
   consensus/100%                                          .h..h.t....h....................p...h...................t......    
   consensus/90%                                           hhs.apth..hh.h.........hhh.hhs..ps.phs.h...........h...hpph...h    
   consensus/80%                                           hhs.Ypph..ll.hph.....hshhlshlsspps.NhGhlht.....hptpht.hhpplt.sh    
   consensus/70%                                           llshYssh..llphsh.....hslhlohluspss.NhGhIhs.....hppphpshlpplppsl