cov pid 1 [ . . . . : . . . 80 1 Q52882/1-2 100.0% 100.0% RRDLTEIAAMIYADAGIYLNESKASLVYSRLSKHIRNLGLKGFRDYCQLVASPA-GAAARRDMLSHLTTNFTRFFRENHH 2 Q53129/1-2 99.3% 46.5% QEDFQRIAQLAHAEAGLTMPDAKEPLVYARLAKRLRQLSLTSFTAYLDLISTPE-GRDERSMFISSMTTNTTRFFREEHH 3 CHER_ECOLI 96.7% 36.7% DAHFRRISQLIYQRAGIVLADHKRDMVYNRLVRRLRSLGLTDFGHYLNLLESNQ-HSGEWQAFINSLTTNLTAFFREAHH 4 O33557/1-2 99.6% 28.9% PAHDQRFSDLIRSRTGIQLPVHRRQMIESRLRPRIAAVGATGFEGYLEQLFDHGLLDDELPLVIDLLTTNKTDFYRESAH 5 G2687931/1 98.1% 32.6% KDELSRLIKIVYNNFGINLSEKKKLLIESRLSSLLKVKGFKNFTEYINFLEKST-GNIQLIELIDKISTNHTYFFRESKH 6 O29225/1-2 97.4% 31.4% DLAFKTLVDYVSKESGINLHQYRESYLRRRIELRMKMLGVKDFGEYLRLLKSNG--KEEVEKLINTITINVTEFMRDKTP 7 G2688317/1 96.3% 30.5% DKLFLKFCDFIYNNSGIRFDEKNKFVLQSRVNDAVRALALENPSQLYNLIISEK---LKKEYFLDLVTTNLTRFFRNSLH 8 Q57508/1-2 97.4% 33.5% DQEYRDFSRFLESQCGIVLGDSKQYLVRSRLSPLVAKFKLTSLSDLLRDVVTGR-NRELRVAAVDAMTTNETLWFRDAYP 9 P72254/1-2 98.1% 32.6% VEDFDMFCTLLKQRSGLVLTKDKAYLLESRLMPIARKWSVKGLDELAAMIRTRK-DEALLRDITEAMTTNESSFFRDQKP 10 CHER_BACSU 94.4% 27.5% MDTYSVFTTKWKQLTGVDLTLYKEAQMKRRLTSLYEKKGFQSFKDFAAALEKDQ---ALLNETLDRMTINVSEFYRNYKR 11 FRZF_MYXXA 97.0% 28.5% QKVLQQLAALLLERAGLKITPDGFHSLRLALSARMPVLGLEEPEHYIQRLTGAG-GEEELRSLLPLVTVGHTEFFRDAKQ 12 Q51774/1-2 94.1% 26.3% --------MLLRTGTGHDFKHYKRATVLRRIERPLQVTAQPDLAAYHDYLQMHP---EETKALLGDMLIGVTNFFRDREA 13 YH19_RHOCA 97.0% 21.1% AEALGRIVEILSLSGEVNFLDYKPGTVQRRIERRMGVRQVPDLTSYLELLTHDR---TELASLRREMLIPVTSFFRDPDS 14 Q51346/1-2 97.8% 25.3% AAEFRDWQVLLENRTGVVLNEQRRTFLQASLTARMRELGIGDYHSYYRQVTDGPRGAVEWATLLDRLTVQETRFFRHPPS 15 YPEB_CAMJE 92.9% 24.1% ELELNEFIKIINEMSGIDLTD-KKNILALKLNKFLEGTNTKNFSEFLGKLKSNR---QLKQETLDFVTIGETYFLRELAQ 16 CheW/Trepa 92.6% 16.0% PGDEENLNVGFISDTLAAFGR-FFTSAVNEGWLRSRYLVWRDVRSGAEVQLQHE---EDVAEFLSTFPSPDTGVFW-SGE consensus/100% .........hh.....h.h.......h..th......h...t.tthht...........h..hh..h....o.hhh.... consensus/90% ......h..hh.t.sth.h...t...h..pl..hht.hth.s.tthht.l.t.......h..hht.h.hs.o.ahRp... consensus/80% .tthpph.thl.ppsGl.hsp.+t.hl.t+lt.hht.hshpshpphhphl.ptt...t.htthls.hohs.TtFaRc.tt consensus/70% .tthpphsthl.ppsGlshsc.+t.hl.pRlp.hhphhuhpshppahphltptt...tthtthlsthThs.TtFFR-ttp cov pid 81 . 1 . . . . : . 160 1 Q52882/1-2 100.0% 100.0% FEHLKTDVLPGLIAR----AKNGGRVRIWSAACSDGQEPYSIALTVLSLLPN--AADYDFRILATDIDPKILALARAGAY 2 Q53129/1-2 99.3% 46.5% FELLSERVLPPLLDA----ARHGARVRFWSAGCSSGEEPFSMAITLLELCPD--AGHYDIKILATDIDRKILGRAQAGWF 3 CHER_ECOLI 96.7% 36.7% FPLLADHARRRS-----------GEYRVWSAAASTGEEPYSIAMTLADTLGT---APGRWKVFASDIDTEVLEKARSGIY 4 O33557/1-2 99.6% 28.9% FDVLVDKIVPETIRHA---TPHAPRLKIWSAASSEGAEAYTAAIVLAEAQRA--GHRFSYAILGTDISHRMLERARRAIY 5 G2687931/1 98.1% 32.6% FDFLNNKILPKLTEKI--LNSENSEIRIWSAGCSSGEEPYTIAMMLKEYMEH-NRVNFKVKILATDISISVLNEAREGIY 6 O29225/1-2 97.4% 31.4% FEFLMKEVLPEIAAKK--SRVNSRVVRAWSAGCSCGEEPYSIAISILETLGE----GWLISIYATDIDDACLEMAREGFY 7 G2688317/1 96.3% 30.5% FQTFEKFVIPNLINIK--NIEKKNRIIIWSAGCSTGEEPYSLAFVLKSKLP----KEIDFVIIASDLSLKSLMIAKEGYY 8 Q57508/1-2 97.4% 33.5% FTVLAERLLPEVAAN-------KRPIKIWSAASSSGQEPYSMAMTVLETQQRKPGMLPSVAITATDISASMLDMCKAGIY 9 P72254/1-2 98.1% 32.6% FDLFKSVVLPLQMPS----RQAKKSIRIWSAACSSGQEAYSLLMTLNDEGHK--VAGWKFDIVGTDISAEMVAKAKAGLY 10 CHER_BACSU 94.4% 27.5% WEVLETAILPLIKTS--------RPLKIWSAACSTGEEPYTLAMLLDQQKG-----LPGYQILATDIDEKALEKAKKGVY 11 FRZF_MYXXA 97.0% 28.5% FRALEKSVLPDLVSR---SRREMRKVSIWSAGCATGEEPYSLAMVLAELGALS----LEVDLWATDLNLAAVEAAKQGRF 12 Q51774/1-2 94.1% 26.3% FEALERNVIPALVKSLQDSQPHREDVRIWSAGCSTGEEAYSLAIVASEQMALE-ACNAKLQVFATDIDDRAIAQGRKGVY 13 YH19_RHOCA 97.0% 21.1% FAELAEKVIDPLVAQ----AAVGSTLRVWTAGCATGEEAYTLAMLFFDAFERA-GRWPTLKIFATDVEPMNIETAAAGFF 14 Q51346/1-2 97.8% 25.3% FELLERYLGERLRRE-----GMPRPWALWSVGCSSGEEPYSLAMCAAQVLRGQ-EREDFFGVTGTDISLHALQRARQANY 15 YPEB_CAMJE 92.9% 24.1% LKEIIYYAKSLE-----------KRVNILSAPCSSGEEVYSLALLAAQNFI------KDMYILGVDINSSVIEKAKLGKY 16 CheW/Trepa 92.6% 16.0% YAASVGSVLSRM--------QVGKVVTVWNIGCGAGHESYSLAVLLRKTFP-----DAVVRVHASDSDLFSISNAPMLTV consensus/100% h......hh................h.hhshssutGtEsaohhh.h.p...........h.lhusD.p...l..s..h.h consensus/90% at.h.t.hh..............t.hthWosususGpEsYohAhhh.p...........h.lhuoDls...lt.ut.uha consensus/80% Fphl.p.lls.hh..........t.lplWSAuCSsGpEsYolAhhhhp.h........thtlhuoDls.thlthA+tGha consensus/70% FphLtptlls.hhtt........p.lplWSAuCSoGcEsYSlAhhlhphh.......hphtlhATDIs.phlttA+tGhY cov pid 161 . . . 2 . . . . 240 1 Q52882/1-2 100.0% 100.0% DATAL-ETVNPAMRKQWFSEVEAG-GRRKWQVDDRVKRLITFNELNLMAQWP---IKGPFDVIFCRNVVIYFDEPTQMKI 2 Q53129/1-2 99.3% 46.5% AASSL-AALPDAVLAHHFGPPDR---DGRREVSADLRALVTFKPLNLVKPWP---VTRPFDVIFCRNVAIYFDPDTQNRI 3 CHER_ECOLI 96.7% 36.7% RHEEL-KNLTPQQLQRYFMRGTGP-HEGLVRVRQELANYVDFAPLNLLAKQYT--VPGPFDAIFCRNVMIYFDQTTQQEI 4 O33557/1-2 99.6% 28.9% TAEQL-SPVPAELRARYTMAGRAPSHAGTARIVPELRDRVQFMHLNLMDSTYP--VDRDVDVIFLRNVLIYFGPEDQAAV 5 G2687931/1 98.1% 32.6% PEDRI-INLPKYLKIKYLNQLQD----DKFQVKEILKKMVYFKKLNLMDEKFP--FSKKFDLIFCRNVMIYFDEKTRNNL 6 O29225/1-2 97.4% 31.4% KPTQL-KNLSKALIAKYFDKEDDG-----YRVKSFLKKIVRFKKHDLTTEEP---ISRFLDIVFCRNVMIYFSEQQKAKV 7 G2688317/1 96.3% 30.5% SSNKC-ENIPKEYRHYIYSHSNG------YKIKNEIKNHIRFDYHNLNFESN----FSEIDVVFCRNVLIYFDEKSKIKV 8 Q57508/1-2 97.4% 33.5% DNLALGRGLSPERRKIFFEDAGDG----RMKIKDNVKRLVNFRPQNLMESYA---LLGKFDIIFCRNVLIYFSPDMKSKV 9 P72254/1-2 98.1% 32.6% TQFEVQRGLPITHLVKYFKQVGD-----KWQISDDLRSRVQFREYNLLSDLS---PLGQFDVIFCRNVLIYFDQPTKTKV 10 CHER_BACSU 94.4% 27.5% QERSL-QEVPVCVKDRYFTQNAN----RSYEVKTEIKKNITFKKHNLLADRY----EQDFDLIVCRNVFIYFTESAKEEL 11 FRZF_MYXXA 97.0% 28.5% TSRRA-ISINQARLTRFFKPVEEG-----YEALPALREYIRFDGQNLAVPVFDKVALSSLDLILCRNVIIYFDLPTIRGL 12 Q51774/1-2 94.1% 26.3% PEAIV-TDVPPQRMRQYFSRENQ-----HYRVRKEIREKVLFAKHSLLADPP----FSQIDLIVCRNLLIYLDRDVQREI 13 YH19_RHOCA 97.0% 21.1% AETIA-ADLPTTFLERFFTTRGG-----QYTIRPEIRQTIVFARHNLLSDPP----FTRMDLVTCRNTLIYFRPEAQERA 14 Q51346/1-2 97.8% 25.3% PARKL-EQLEAGLVERYCERQAD----GSFSVKTILTERVCCARLNVLDLAKAP--WSGMDVIFCQNLLIYFRRWRRREI 15 YPEB_CAMJE 92.9% 24.1% QGRTL-QRLSESEKRRFFLESED----KFYTINKNELCTCKFELCNVFEEKFS--RLGKFDIIASRNMIIYFDHESKLKL 16 CheW/Trepa 92.6% 16.0% PEHVI-GDWYKPYVVK--GVSGS------YTFSQEIKEMVLFEYHDCTHPSA----LPDVDLIVARDVLSSLAVPVQHTL consensus/100% ....h...h....h.......tt......hph....ht.h.h...sh............hDhlh.pshh..ht.....th consensus/90% .t..h..tl....h..hh...tt......hph...ltphl.Ft..slh.........t.hDllhsRNhhIYht...p.tl consensus/80% .tptl.tsls.thhtpahtt.ts......hplpttl+phl.Ft.hNLht........t.hDlIhCRNlhIYFs..sptpl consensus/70% stptl.tsls.thht+aatp.ts......aplpppl+phlpFt.hNLhtp.......tthDlIhCRNVhIYFs..sptcl cov pid 241 : . . . ] 282 1 Q52882/1-2 100.0% 100.0% WSRFAGVLDNGGHLYIGHSERVSGDAK-ALFDNIGITTYRHT 2 Q53129/1-2 99.3% 46.5% WRGFASTLAPGGHLFIGHSERLSHEVR-HQFETVGMTSFRLR 3 CHER_ECOLI 96.7% 36.7% LRRFVPLLKPDGLLFAGHSENFSHLER--RFTLRGQTVYALS 4 O33557/1-2 99.6% 28.9% IARMAGHLRPGGYLMVGHSESMVVSH--PQMKQHSPSVFRKT 5 G2687931/1 98.1% 32.6% ANKFNSYLKKDSYLLIGHSETIRGNK---NLEYIMPATYKKN 6 O29225/1-2 97.4% 31.4% VNDFYNALVDGGYLVIGRSETLPPGFK-DRFECVNLREKVYR 7 G2688317/1 96.3% 30.5% LKKFYNNMSKNSYLFIGHSESLFGLNLPFKFLKTPWAIIYEK 8 Q57508/1-2 97.4% 33.5% LNQMASSLNPGGYLLLGASESLTGLTD--KFEMVRCNPGIIY 9 P72254/1-2 98.1% 32.6% LEAMARMLPPDGVLYLGGAETVLGITD--KFKPMEGQRGLYQ 10 CHER_BACSU 94.4% 27.5% YLKMAHSLKKNGVLFVGSTEQIFNPE---KFGLVPADTFFYQ 11 FRZF_MYXXA 97.0% 28.5% MDRFLAALRPGGLLFLGYSESLFKVYD--RFEMIEVDGAFVY 12 Q51774/1-2 94.1% 26.3% LQMFHFALRPGGYLFLGSSESADGCQD--LFVPVDKRNRIFR 13 YH19_RHOCA 97.0% 21.1% LRRMHYAVRTGGYLFLGGSEALVQVQD--DFSVLSARHRIWQ 14 Q51346/1-2 97.8% 25.3% LNRLAERLAPGGLLVIGVGEVVDWSHP--ELEPVADERVLAF 15 YPEB_CAMJE 92.9% 24.1% MERFHRILNDKGRLYVGNADLIPETIY---FKKISLQEVFTM 16 CheW/Trepa 92.6% 16.0% LKEFSEKLKATGVVLLGQNEVMPKDTG--WLRQIEGTVAVFS consensus/100% h..h...h..tuhlhhG.s-.h........h..h..t.hh.. consensus/90% htth...l..suhLhlG.sE.h........h..h..t.hhh. consensus/80% hpphhthLtssGhLhlGtuEth.t......hp.ht.p.hhh. consensus/70% hpchtthLpssGhLhlGtoEsl.t.t...pFp.lthp.hhhp