cov pid 1 [ . . . . : . . . 80 1 167879.CPS_3626_from_52_to_150 100.0% 100.0% LGASAGSRPEPDFPHLGIELKSLPINEQ------AK-----PLETTFVSVAPLTGL-VGVNWHNCY-VRKKLARVLWVPV 2 326442.PSHAa0743_from_54_to_15 100.0% 56.6% LGATAGSKPLPDFEDLGIELKTLPISYK------GK-----PLETTFVSVTPLINV-TGMTWHASS-VRKKLNHVLWLPI 3 283942.IL0502_from_56_to_154 100.0% 54.5% LGATAGSKPTQDFPELGVELKTLPVTPD------GE-----PLETTFVCTAPLVNI-QGVQWTTSN-VRNKLQQVLWLPI 4 342610.Patl_3848_from_60_to_15 100.0% 50.5% LGAEAGSKAQQDFASIGVELKTIPIDVN------GY-----PLETTYVCYAHLVDV-AGIHWATSS-VRNKLNKVLWVPI 5 416269.APL_1109_from_55_to_153 100.0% 55.6% LGAKAGSKPEQDFAHLGIELKTIPINHK------GF-----PLETTFVSLAPLTQN-TGITWQTSH-VRHKLQKVLWIPV 6 233412.HD0544_from_55_to_153 100.0% 50.5% LGATAGSKPEQDFAHLGIELKTIPINNH------GL-----PLETTFICLAPLIHN-QGITWQTSH-VKYKLQRVLWIPI 7 205914.HS_1550_from_55_to_153 100.0% 55.6% LGATAGSKAEQDFSHLGIELKTIPVNQQ------GY-----PLETTFVSLAPLAQN-SGVTWHSSH-VRYKLSKVLWIPI 8 272843.PM1067_from_51_to_149 100.0% 60.6% LGATAGSKAEQDFAHLGIELKTLPINAQ------GM-----PLETTFVSLAPLTQN-VGVSWENSH-VRHKLSKVLWILV 9 281310.NTHI0524_from_51_to_149 100.0% 54.5% LGATAGSKAEQDFSHLGVELKTLPINAE------GY-----PLETTFVSLAPLVQN-SGIKWENSH-VRHKLSCVLWIPI 10 339671.Asuc_1903_from_54_to_15 100.0% 58.6% LGAEAGSKPEQDFSHLGIELKTIPINRQ------GY-----PLETTFVSLAPLVQN-SGVNWAHSH-VKHKLSKVLWIPV 11 221988.MS0635_from_28_to_126 100.0% 56.6% LGAKAGSKPEQDFANLGIELKTIPINSA------GF-----PLETTFVSLAPLIQT-AGVNWHNSH-LRYKLSKVLWIPI 12 218491.ECA0984_from_59_to_157 100.0% 63.6% LGASAGSKPEQDFPEIGVELKTIPIDEQ------GK-----PLETTFVCVAPLTGN-SGVTWESSH-VRHKLARVLWIPV 13 380703.AHA_0671_from_53_to_151 100.0% 64.6% LGASAGSKPEQDFPDLGIELKTIPIDPQ------GK-----PLETTFVCVAPLIGV-SGQQWELSN-VRNKLSRVLWIPV 14 243265.plu3678_from_59_to_157 100.0% 60.6% LGASAGSKPEQDFEHIGIELKTIPVDRR------GY-----PLETTFVCVAPLTGN-SGITWGSCH-VRRKLSRVLWIPV 15 290339.ESA_00478_from_85_to_18 100.0% 59.6% LGASAGSKPEQDFAALGVELKTIPIDSQ------GR-----PLETTFVCVAPLTGN-TGVTWETSH-VRHKLKRVLWVPV 16 374463.BCI_0541_from_56_to_154 100.0% 54.5% LGASAGNKPEQDFATIGIELKTIPVDNN------GR-----SLETTFVCTAPLTGK-TGITWEVSY-VRYKLARVLWIPV 17 243277.VC0668_from_53_to_151 100.0% 61.6% LGATAGSRPQQDFEHLGIELKSIPISYT------GK-----PLETTFVCVAPLTGV-HGLTWEQSH-VRNKLSKVLWIPV 18 223926.VP0518_from_53_to_151 100.0% 59.6% LGAPAGSKPQQDFSKLGIELKSIPIGYN------GR-----PLETTFVCVAPLTGV-QGLTWETSH-VRNKLSRVLWVPV 19 298386.PBPRA0576_from_53_to_15 100.0% 63.6% LGAMAGSKPIPDFPELGIELKTIPIGYS------GK-----PLETTFVCVAPLIGL-HGLHWGNSH-IRHKLARVLWVPV 20 312309.VF0455_from_54_to_152 100.0% 56.6% LGASAGSKPLPDFIDLSVELKTIPISYT------GK-----PLETTFVCVAPLTGV-HSLQWEESH-VRHKLAHVLWIPV 21 402882.Shew185_1227_from_55_to 100.0% 56.6% LGATAGSKPEQDFLHLGVELKTIPIDSQ------GR-----PLETTYVCVAPLSNI-QGLTWQNSL-VCHKLQRVLWVPV 22 318167.Sfri_2946_from_54_to_15 100.0% 56.6% LGALAGSRPEQDFLHLGVELKTIPIDHN------GK-----PLETTYVTVAPLTNI-QGMTWENSL-VYHKLQRVLWVPV 23 425104.Ssed_1131_from_56_to_15 100.0% 56.6% LGAIAGSRPEQDFLHLGIELKTIPVDSK------GK-----PMETTYVTVAPLVDI-QGLTWENSV-VCHKLQTVLWVPV 24 326297.Sama_0862_from_55_to_15 100.0% 54.5% LGATAGSRPEQDFLHLGVELKTIPIDRS------GK-----PLETTYVCVAPLMDT-HGLRWEQSL-VKHKLERVLWVPV 25 318161.Sden_2783_from_54_to_15 100.0% 57.6% LGAMAGSKPEQDFLHLGVELKTIPIGPS------GK-----PLETTYVCVAPLTNI-QGHTWEASL-VCHKLQQVLWVPV 26 398579.Spea_1020_from_56_to_15 100.0% 55.6% LGALAGSKPEQDFAHLGVELKTIPINRL------GK-----VLETTYVTVAPLTNI-QGLTWEESV-VCHKLQQVLWIPV 27 323850.Shew_1037_from_56_to_15 100.0% 54.5% LGATAGSKPEQDFLHLGVELKTIPVDES------GK-----PLETTYVTVAPLMNI-NGLRWQESL-VYHKLQRVLWIPV 28 357804.Ping_0501_from_54_to_15 100.0% 54.5% LGATAGSKPEQDFKHLGIELKTIPIDQN------GK-----VLETTFVCSAPILNT-RQLNWENSN-VRNKISKVLWVPV 29 323261.Noc_2831_from_57_to_154 99.0% 49.5% LGATSGSQAVPDFPALGVEMKTLPLQAD------GR-----PKESTYVCTVPLTD--SEACWETSW-IRRKLNRVLWLPV 30 297245.lpl1548_from_58_to_156 100.0% 45.5% LGADAKNESLPDFKHLGIELKTIPINKS------GK-----PAESTFIVSIPLLTI-HQQSWESSQ-CYAKLKKVLWIPI 31 224915.bbp018_from_53_to_151 99.0% 38.0% VNVLHGYK-CIDFPSLGIELKSIPINSS------GY-----PLEPTFICNIPLKNNSLNITWNNSY-FYRKIKKILWIPI 32 206672.BL0563_from_61_to_169 100.0% 13.8% YAINSDAAPDIHIGDTSYELKVTPLKHI----KKGK--QTSAKERLVIDIINYLTLADETDFESSK-MWDKAKNIILVYY 33 367928.BAD_1232_from_55_to_164 99.0% 12.6% YPVNSDAEADILVGDTRYELKVTPLKHS----GKGKRTKTVAKERLVLDIINYENLPKE-NFEDSR-FWNKSKNIIMVYY 34 195103.CPF_1016_from_73_to_174 92.9% 12.8% YKCNNDSRPDFP--DAGVELKVTPYK-I----NKNK--TLSAKERLIITMIDYFKVIEE-SFEDSH-LWNKSQLILLIYY 35 367928.BAD_1229_from_174_to_27 92.9% 14.0% HPADNISAPDFP--EAEVELKVSPIDIK----KSKDGPSCIAGERLVLNTINYAKESTA-DFRTSS-FWKKNRFIELMQY 36 265669.LMOf2365_0325_from_51_t 90.9% 12.6% HPADNISEPDFK--EAGVELKVTPIDKQSKGNKDKKVTRLIAGERLVLNKIHYKNEYKK-SFEESS-FWHKNKVIELIQY 37 279808.SH0580_from_48_to_150 97.0% 14.2% KIKDSDSKPDME--EAGVELKATPFKKL----KSGKYS---AKERLVLNIINYEKVAEE-QFEESS-FLYKNGTIELAFY 38 326298.Tmden_1854_from_55_to_1 97.0% 14.4% YAPNSNAEADFP--EVNLELKSSPLKQL----KNNQFR---AKERLSLNIINYQDIVHQ-NFETSS-FWKKNENLLLVFY 39 278197.PEPE_0531_from_56_to_16 99.0% 15.9% YPSDSYQSPDLCVDGVDIELKTTGIKVAK---KKSKSHLFEAKEPMSITAVSPEKITTE-EFESSN-FWHKLERMLLVYY 40 265311.Mfl307_from_50_to_154 97.0% 15.7% IDINNRSESDFKELGLDLELKVTGLKQN-------KKKQWIAKERVSLSMIDFNNIEKD--FTDSK-VLNKNKNILLIGH 41 348780.NP2356A_from_58_to_165 100.0% 24.1% FNIETNSSAEPDFGKAGIELKVTPLRLT------GNNELVRPKERLVLCMCDYMEVVDADHWTDVPALRKKLEQVLIIWY consensus/100% h...t..t......ththEhKs.sht...............shE.h.ls.h...t...t..at.s..hh.K.t.h.hh.h consensus/90% hss.stups..p..phslELKshPlp........sh.....shEphhlshhsh.t..tt.pappS..hh.K.tpllhl.h consensus/80% hsupusScsp.-h.clGlELKohPlp.p......Gh.....shEphhlshhshht..pt.pappS..hhpKlpplLhl.h consensus/70% LGAsAGS+P-.DF.clGlELKolPls.p......Gc.....PhEoTalshsPLhs..puhsWcsSp.lhpKLppVLWlPl cov pid 81 . 1 . ] 117 1 167879.CPS_3626_from_52_to_150 100.0% 100.0% ISPKDVPISERIVGTPFLWSPNA-----EEEALLAQD 2 326442.PSHAa0743_from_54_to_15 100.0% 56.6% LSERDIAPFDRTIGSGFLWQPTP-----EQDALLQRD 3 283942.IL0502_from_56_to_154 100.0% 54.5% DGRREVPLAERVVGSAFLWVPSE-----QEEALLRND 4 342610.Patl_3848_from_60_to_15 100.0% 50.5% DGRRDIPPSERVIGTPFLWSLQG-----QQEAYLRQD 5 416269.APL_1109_from_55_to_153 100.0% 55.6% QGERHIPVAERHIGQPILWEPSC-----EQEQQLKND 6 233412.HD0544_from_55_to_153 100.0% 50.5% QAERSIPIKDRYIGRAILWSPSY-----QQEQQLRND 7 205914.HS_1550_from_55_to_153 100.0% 55.6% EGERQIPLAERHVGVPILWQPSS-----SQEQRLRQD 8 272843.PM1067_from_51_to_149 100.0% 60.6% EGERQIPLSERRVGQPILWQPSA-----QQELRLKRD 9 281310.NTHI0524_from_51_to_149 100.0% 54.5% EGSRHIPLRERHIGAPIFWKPTA-----EQERQLKQD 10 339671.Asuc_1903_from_54_to_15 100.0% 58.6% QGERQIPLAERYIGAPLLWQPNT-----EQEARLRRD 11 221988.MS0635_from_28_to_126 100.0% 56.6% QGERQIPLAERRIGSPILWQPDP-----QQEARLQQD 12 218491.ECA0984_from_59_to_157 100.0% 63.6% EGSRHIPLGERRIGTPLIWSPND-----EEEEQLRCD 13 380703.AHA_0671_from_53_to_151 100.0% 64.6% EGSREIPIGERRIGMPLLWSPNE-----EEERLLRQD 14 243265.plu3678_from_59_to_157 100.0% 60.6% EGEREIPLAKRRVGSPLLWSPNQ-----EEEELLRRD 15 290339.ESA_00478_from_85_to_18 100.0% 59.6% EGEREIPLAERRVGAPLLWSPSP-----QEDDQLRRD 16 374463.BCI_0541_from_56_to_154 100.0% 54.5% EGQREIPVAQRHIGTPILWSPSA-----QEALQLQCD 17 243277.VC0668_from_53_to_151 100.0% 61.6% QGEREIPLAERCVGSPLLWSPSP-----EEEAQLKAD 18 223926.VP0518_from_53_to_151 100.0% 59.6% EGEREIPLAERRVGTPLIWSPDK-----EEEQILRND 19 298386.PBPRA0576_from_53_to_15 100.0% 63.6% EGERDIPLADRHVGSPLLWSPSI-----EEEQQLRQD 20 312309.VF0455_from_54_to_152 100.0% 56.6% EGEREIPVGDRHVGYPVLWQPSL-----EEERQLKQD 21 402882.Shew185_1227_from_55_to 100.0% 56.6% EGERHIPVAERRIGTPILWEPDP-----QELQLLQQD 22 318167.Sfri_2946_from_54_to_15 100.0% 56.6% EGERSITVGERRIGTPILWQPNT-----TQARQLQQD 23 425104.Ssed_1131_from_56_to_15 100.0% 56.6% QGERQIPVADRQIGTPILWTPNS-----DEIALLKQD 24 326297.Sama_0862_from_55_to_15 100.0% 54.5% EGERDIPVADRRIGTAILWQPTP-----QQSASLRQD 25 318161.Sden_2783_from_54_to_15 100.0% 57.6% EGHRSIPIAERRIGTPVLWQPSP-----EQQALLKQD 26 398579.Spea_1020_from_56_to_15 100.0% 55.6% QGDRELPLSERQIGSPILWQPSV-----EESELLKQD 27 323850.Shew_1037_from_56_to_15 100.0% 54.5% EGIRHKPIGERRIGSPILWTPSE-----EEMAQIRQD 28 357804.Ping_0501_from_54_to_15 100.0% 54.5% QGERTVPLCDRIVGNSFLWSANQ-----QQTQLLKLD 29 323261.Noc_2831_from_57_to_154 99.0% 49.5% EAQAGMPLSVRRVGMPLLWSPNS-----EEEAILRAD 30 297245.lpl1548_from_58_to_156 100.0% 45.5% EGDTDIPFPHRRIGCGFLWSPNK-----DQESVLAED 31 224915.bbp018_from_53_to_151 99.0% 38.0% IGNRVVSFLDKIVGEAFIWTMSS-----VQEKILKKD 32 206672.BL0563_from_61_to_169 100.0% 13.8% YDDRTDKKKELRIDCKVLASYLMKYE-ADDLATIKND 33 367928.BAD_1232_from_55_to_164 99.0% 12.6% YDDREDKKTQSRLDCKVLKSVVLHYD-ENDLATIRDD 34 195103.CPF_1016_from_73_to_174 92.9% 12.8% LYS---KDIGNRLDYKINYAKLFTPP-EEDLEIIKND 35 367928.BAD_1229_from_174_to_27 92.9% 14.0% LRRIASEKGQSEDKRKYKIEYAH---------LLAMD 36 265669.LMOf2365_0325_from_51_t 90.9% 12.6% YRRDTSDKKKFSSKE--LIEDKK---------QFKIA 37 279808.SH0580_from_48_to_150 97.0% 14.2% EYVKDIEREEWKIEEAVLYEMKKNP---VDYEIIKKD 38 326298.Tmden_1854_from_55_to_1 97.0% 14.4% LYENDTNVLDYVIKLVDEWTFPS-----IDLEIIKQD 39 278197.PEPE_0531_from_56_to_16 99.0% 15.9% FYDSDVTVTAAEYANFLIKGYDFHEFSKEDQETLKND 40 265311.Mfl307_from_50_to_154 97.0% 15.7% EYNKDKNRKNLKIIKSILWKYENISE--NEKKIIEND 41 348780.NP2356A_from_58_to_165 100.0% 24.1% IHIVGQDRRTYPIVWWTLWEPMTEP---EWSEIIQSD consensus/100% ..................h..............ht.s consensus/90% .hppt..h.ph.lt..hlhp.........p.t.lptD consensus/80% .sp+phshtcphlstshLWp.s......pp.t.lppD consensus/70% pucRplsls-RplGpslLWpPs......pppt.L+pD