cov pid 1 [ . . . . : . . . 80 1 hsM7a/1-0 100.0% 100.0% YTRRPLKQPLLYHDDE---GDQLAALAVWITILRFMGDLPEPKYHTAM-SKIYETLGKKTYKRELQALQGEGEAQLPEGQ 2 mmM7b/1-0 81.1% 46.8% -IQKPLRYPLLYHEND---TDHSAALDVWIIILRFMGDLPEPVVYG---RQIHDKLG----------------------- 3 ceM7c/1-0 99.0% 51.9% HVKKPLKTALLTHTEP---SAQLAALTAWTTILRFMGDLADVKPGSTNGSKLYATLGKKFSAHDLEEAMLSSEYG-GAKT 4 dmM7e/1-0 87.6% 37.4% HERKPLKKSLLKHEHP---IDEMASKAIWLTILRFMGDLPDVVSSPT--LDLASLLN----------------------T 5 ceM12/1-0 64.7% 19.5% PRREPIMTPFLHKESD---YDFRLSVEIFKLILKYMNDIKLTK------------------------------------- 6 hsM15/1-0 64.2% 21.7% MLTVPLRTPLTQLPA----EHHAEAVSIFKLILRFMGDPHLHG------------------------------------- 7 ddM7f/1-0 66.7% 20.0% YQKSHIKSSLLVHSDA---EQTKVAVEIFSKVLHYMNSNPLVS------------------------------------- 8 ddM7f/2-0 64.7% 16.0% FNKDPIKESLIEMEAK----LSKKAIKNFSEIMMWMGDYPIPK------------------------------------- 9 hsM10/1-130 60.7% 15.4% -PYGDINLNLLKDKGYTTLQDEAIKIFNSLQQLESMSD-PIP-------------------------------------- 10 hsM7a/2-0 64.7% 22.9% HTREPLKQALLKKLLGS-EELSQEACLAFIAVLKYMGDYPSKR------------------------------------- 11 dmM7d/2-0 63.2% 23.6% YSRDPIKAPLLRKLQSK-EEFAEEACFAFAAILKYMGDLPSKR------------------------------------- 12 ceM7c/2-0 64.7% 22.1% FSREHIDQPLLKKLNGR-EDACRGAIEIFAAIMKYMGDEPSKR------------------------------------- 13 mmM7b/2-0 64.7% 23.9% YSPEPLRQPLLKSVHDK-AKLRDAACQIFLAILKYTGDYPSRQ------------------------------------- 14 dmM7e/2-0 63.2% 16.2% FSSRHWLCIIIFLRDMG-IEDTSYSSYNQYVLNIYMGDIARSN------------------------------------- 15 hsM15/2-0 64.7% 20.7% FTKTPLQESLIELSDS---SLSKMATDMFLAVMRFMGDAPLKG------------------------------------- 16 ceM12/2-0 65.2% 18.3% FSEKPISQSLLADLGN---EESKYAVETFHAIMKFMGDEPLKK------------------------------------- 17 acM4/1-136 63.2% 17.6% WTKSPIPTSLTTLDQL----AVKSATRLFKNVLGFMGDRPLPY------------------------------------- 18 atKIN/1-144 67.2% 16.7% KIPIPIPTSLLKINSD----LVSRATKLFHLILKYMGVDSSDR------------------------------------- 19 kiaa1200/1-138 65.7% 16.9% YSKDGLYASLTTLPSE---ALQTEALKLFKSCQLFIN-VPVEA------------------------------------- 20 CAA20901/1-139 65.7% 16.3% HTKDTITAPLSSMHTE---TMQPEAIKLFKSIQLFMS-VAVNQ------------------------------------- consensus/100% .....h...h..............t..........hs........................................... consensus/90% ...t.l.tsLh...t.........uh..ah.l.haMss.s........................................ consensus/80% h.ppsl.tsLlth.t......pt.Ahthah.lhtaMuD.s..t..................................... consensus/70% asccPlppsLlph.st...t.pptAhphFhtlh+aMGDhP..t..................................... cov pid 81 . 1 . . . . : . 160 1 hsM7a/1-0 100.0% 100.0% KKSSVRHKLVHLTLKKKSKLGESTVQG-NSMLEDRPTSNLEKLHFIIGNGILRPALRDEIYCQISKQLTHRGWILVSLCV 2 mmM7b/1-0 81.1% 46.8% ------------KDSVTQHNFGEEAFKFDGPISDRPMSNLEKVHFIVGYAIMRPGLRDEIYCQICKQLSERGWILLSLCL 3 ceM7c/1-0 99.0% 51.9% LKKGMGRKLISMTLKRKGKID-SVYSSFNAMLENKPMTSLDKLHYIIGLGILREDLRDEIYCQLCKQLSNRGWILLSLCV 4 dmM7e/1-0 87.6% 37.4% SDSYKPRLFVRQSQRRIP--GEKEAQEFYQHWLNVPTSHLEKIHFIIGHGIIKNSLRDEILAQICKQLYLRGWLLLSLCL 5 ceM12/1-0 64.7% 19.5% ------------------------------------KQREDLGRYIVQQGISNPCQRDEILVQTINQINKNGWKLVHMAI 6 hsM15/1-0 64.2% 21.7% ------------------------------------ARENIFGNYIVQKGLAVPELRDEILAQLANQVWHRGWLLLAACL 7 ddM7f/1-0 66.7% 20.0% --------------------------------KKDPADFYSPVKFILTKGLAIESLRDEIYCQLIKQSTSRVWELIHFTC 8 ddM7f/2-0 64.7% 16.0% -----------------------------------GQTASLVIQSIISRGIENHELRDEIYCQAYRQTNKKGFELIYFLS 9 hsM10/1-130 60.7% 15.4% -----------------------------------------IIQGILQTGHDLRPLRDELYCQLIKQTNKYSWQILTCLS 10 hsM7a/2-0 64.7% 22.9% -----------------------------------TRSVNELTDQIFEGPLKAEPLKDEAYVQILKQLTDRGWELLWLCT 11 dmM7d/2-0 63.2% 23.6% -----------------------------------PRMGNEITDHIFDGPLKHEILRDEIYCQLMKQLTDRGWELMWLAT 12 ceM7c/2-0 64.7% 22.1% -----------------------------------SRLGTHLTDHIFKLPISMEALRDELYCQLVKQLTLRGWELLWMAT 13 mmM7b/2-0 64.7% 23.9% -----------------------------------SWHSLELTDQMFSLALQDPALQDELYCQILKQLTHRAWQLLWLCT 14 dmM7e/2-0 63.2% 16.2% --------------------------------------LPVNTDLIFQPALQHPLLCDELYCQLMKQLSDRGWDLLYLAT 15 hsM15/2-0 64.7% 20.7% ------------------------------------QSDLDVLCNLLKLCGDHEVMRDECYCQVVKQITDRGWRLLYIVT 16 ceM12/2-0 65.2% 18.3% -----------------------------------SESMTDVVFKVLLICHRQPTLRDEVYCQLIKQTTSRAWRLLTIIT 17 acM4/1-136 63.2% 17.6% --------------------------------------PNALAQDLLEQCLAAPELRNEVYCQIIKQLTEKGWQLMRCCL 18 atKIN/1-144 67.2% 16.7% ------------------------------STPPSLDERIDLVGKLFKKTLKRVELRDELFAQISKQTRHKAWELMYLCA 19 kiaa1200/1-138 65.7% 16.9% ---------------------------------ASVDYHVSLAQTALQVCLVHPELQSEIYCQLMKQTSCQCWQLLALCA 20 CAA20901/1-139 65.7% 16.3% ---------------------------------PGIDYHVVLAQNALQHALDMPELQTEMICILIKQTSCQGWQLLALAV consensus/100% ..........................................h..hh..sh.....psEhhs.h.pQ....sa.lh.hh. consensus/90% .........................................hhp.hht.sh....LpsEhhsQlh+QhpppuW.Lh.hhh consensus/80% .........................................hhp.lhthsl.h..L+DElasQlhKQhsp+uW.Llhhsh consensus/70% ....................................t.t.phsphllphsltt.tLRDElYCQlhKQhop+GWpLlhhss cov pid 161 . . . 2 . ] 218 1 hsM7a/1-0 100.0% 100.0% GCFAPSE-KFVKYLRNFIHGGPP-----------GYAPYCEEGTRTQPPSWLELQATK 2 mmM7b/1-0 81.1% 46.8% GCFPPSE-RFMKYLLNFISQGPP-----------SYGPFCAEGVRAEPPTWLELQAVK 3 ceM7c/1-0 99.0% 51.9% GCFAPSE-RFIKYLFCFIRERGPAGT--------GYSKYIEDGTRHQPPSYVELQANK 4 dmM7e/1-0 87.6% 37.4% SCFPPSK-EFEPHLRSFMKQGTAQ----------LQATPSLQGPRCQPPSLFELHAIR 5 ceM12/1-0 64.7% 19.5% SVFPPTE-NIIPMLIGFFNKESVP-------MKEQLFAYDSEIARELPPSNLELIATP 6 hsM15/1-0 64.2% 21.7% SGFAPSP-CFNKYLLKFVSDYGRN-----GFQAVCQHQQGSGAARTLPPTQLEWTATY 7 ddM7f/1-0 66.7% 20.0% STFPPTR-KLIKYFAAYLKTTIQQSDVS--KSVKDSAQASYFGARKQVPSVTELESIK 8 ddM7f/2-0 64.7% 16.0% ITFSPSDSLLQPFMEQLMSRNIAIQSSSPQLASLIAVCIESYQQRKMGPSATEIQSFR 9 hsM10/1-130 60.7% 15.4% CTFLPSR-GILKYLKFHLKRIREQFPGT------EMEKYALFKCREFVPSRDEIEALI 10 hsM7a/2-0 64.7% 22.9% GLFPPSN-ILLPHVQRFLQSRKHCP----------LAIDCLQGSRKYPPHLVEVEAIQ 11 dmM7d/2-0 63.2% 23.6% GLFACSQ-GLLKELLLFLRTRRH---------------DSMHGQRKYPPHQVEVEAIQ 12 ceM7c/2-0 64.7% 22.1% GLFAPSA-ALAKEISHFLKSRPHP-----------IALDCQNGSRKYPPHLVEVEAIQ 13 mmM7b/2-0 64.7% 23.9% GLFPPGK-TLLPHAQKFIDSRKKKP----------LALDCSRGPRKQPPHDVEVKAAE 14 dmM7e/2-0 63.2% 16.2% GLVAPSV-LVMRELIILLRMRADA-----------LADACLKGQRKKAPHLIEVEGIQ 15 hsM15/2-0 64.7% 20.7% AYHSCSE-VLHPHLTRFLQDVSRTPGLP----FQGIAKACEQGGRLELPSSIELRAML 16 ceM12/2-0 65.2% 18.3% AYFPSSL-TLKPYVLQYLGDNADEWQRP----FHGTARICQTGGRKVLLNALEVQQIT 17 acM4/1-136 63.2% 17.6% QTFPPSE-EFANCLEMFLAAKGKDDKYIE--MLHDTQYVEQILAAKQYVTRIDLNQST 18 atKIN/1-144 67.2% 16.7% SSMPPSK-DIGGYLSEYIHNVAHDATIEP--DAQVLAVNTLKGPRHTTPGREEIEALL 19 kiaa1200/1-138 65.7% 16.9% PLFLPQH-HFLWYVKQQLQRHADPRSETG-----QYATYCQRGEREARPSRMEVVSIL 20 CAA20901/1-139 65.7% 16.3% SLFVPRSSRLLWYLKLHLSRNADTKTETG-----KYAAYCERGGRETKPSRMEVLSIL consensus/100% ..h.st...h...h...ht.........................t....t..-h.t.. consensus/90% shasss...h...h..hhpt...................t..t.Rp..Pp.hEl.uh. consensus/80% uhFsPop.thh.hl..alppt.t............ht..s.tusRp..Pp.hElpuh. consensus/70% uhFsPSp.thh.alhtalpptsp............huh.s.pGsRc.sPshhElpuhh