cov pid 1 [ . . . . : . . . 80 1 O08523/98-254 100.0% 100.0% PFWADVH----NGIRGEIYYRE-----TMDPAILRRATKDIRKYFKDMT----------TFSATWVFIVTWEEVTFYGGS 2 O88322/108-276 98.7% 28.1% PFLADIDT---SHSRGRILYRED-----TSGAVLSLAARYVRTGFPLSGS---------SFTPTHAFLATWEHVGAYEEV 3 YMS5_CAEE/287-4 94.9% 30.5% YGKRKKRQ-----MPGRVSQPGMV----VDPWLLDNITRHIQDGYTGAN----------GFRAEHAFIATWYRMAHGGAA 4 NIDO_MOUS/106-2 96.8% 28.8% PFLADLDT---TDGLGNVYYRED-----LSPFIIQMAAEYVQRGFPEV-----------SFQPTSVVVVTWESVAPYGGP 5 CAB85602/141-29 94.3% 21.0% PFWDDADFST---GRGTTFYQEYET-FYGEHSLLVQQAESWIRKITNNG----------GYKARWALKVTWVNAHAYPAQ 6 AAF23818/391-54 94.3% 21.6% PFWADADFSS---SRGAIFYQEYVT-FYNEHHQLIREVETLINDFTSSW----------GYRAKWTLKVTWVNVPAYTAQ 7 7303761/107-262 96.8% 26.1% AFYSNVDTSFSDEGTSISLFES------KEQSILDRASSLVRYAFSSQS----------EFEARQVIVATWRNVGYFDSK 8 YLK2_CAEE/216-3 86.6% 29.4% PFWNRNDL----RNGGKVYYREV-----TKGRVLERGQSEIRYQYDK------------NVKVKSALIITWDKMQPLNTA 9 7302021/244-404 91.7% 27.6% IYPSDIDQ-----RTPGVYFRV------ERDLMGRTDRFGVEVRERTMWDIRQGVVGADTFIPKHVVIATWKNVSFAGGI 10 Q04901/86-233 90.4% 27.0% PFMSDLDT----ELSGDIFFREH-----KDNATIARANTDVREAFIETAG---------DFNAGSVFVVTWDKVQSASRE 11 A53577/1334-149 92.4% 17.3% SGVMLISL-----APGEPYFRTTTSHFTMSSTSLIRKVESLINEFTSD-----------WSFKPSDTEVTWVNVPAYPAQ 12 Q17494/43-178 85.4% 27.7% VFWQPAT-------LGNVWYRE-----TSDINIMNLAHNEVNIQYRYGA----------QFRVRSVVLITWEGVKDPLVP 13 Q93791/93-232 86.6% 24.2% VFYVPVT-------SGVIDYRVSS----DDQGLLTKLTQDVKQVFADAV----------EFHGLQAVIITWTQIENAEKD 14 YLK2_CAEE/530-6 87.9% 18.4% MEWNLKK-------PLKIFGET-----TEKLTVTSTGLIAINEVNRDNG---------RLEDMQLVGIAPFFGPIDLSRN 15 Q17494/637-773 81.5% 17.5% IFALHAQFDY--IREGLVAYTFIND---TDAVTLPLLMRSSIGIQTAMGI--------ENFQTKRLHIFTFDRVRQSGSE 16 YF1M_CAEE/216-3 93.6% 16.0% FFGQQASQ--ACPGTADSYVRCDS----NSDYFLDQMMIWVQEGVAGGA----------MFRADAAVVVTWYNTASAISG consensus/100% ......p......................p...h................................h.hsa.t....... consensus/90% .hh..hp........s...hp........p...h......h........................shhhTa.th....t. consensus/80% .aht.hp........uthhapt.......p.hhl.hhhp.l...htt............tapsp.shlhTW.pst.h.t. consensus/70% .Fhtphs........Gtlhacp......tc.hhltpthptlptthtt............tapsptshlsTW.pst.hsst cov pid 81 . 1 . . . . : . 160 1 O08523/98-254 100.0% 100.0% STT----------PVNTFQAVLVS-----DGSYTFTLFNYYEINWTTGTASGGDPLTGLGGVMAQAGFNGGNLT------ 2 O88322/108-276 98.7% 28.1% SRGAAPSG-----ELNTFQAVLAS-----DESDTYAFFLYPANGLQFFGTRPKESYNVQLQLPARVGFCRGEADDLKREA 3 YMS5_CAEE/287-4 94.9% 30.5% RALDVSQFEHVKDWQNTFQVVLAS-----DEIRTFAIFNYARLNWTSSNEAGGLDGFGG-KQAAMAGFNGGNGTGWYG-- 4 NIDO_MOUS/106-2 96.8% 28.8% SSSPA-----EEGKRNTFQAVLAS-----SNSSSYAIFLYPEDGLQFFTTFSKKDES---QVPAVVGFSKGLVGFLWKSN 5 CAB85602/141-29 94.3% 21.0% WTL----------GSNTYQAILST-----DGSRSYALFLYQSGGMQWDVAQRS-------GNPVLMGFSSGDGYFEN--- 6 AAF23818/391-54 94.3% 21.6% ESF----------GTNTYQAILST-----DGSRSYALFLYQNGGMRWDVTQEP-------YNRVLMGFSSGDGYFEN--- 7 7303761/107-262 96.8% 26.1% TDR-----------LNTFQVALIA-----NEQSTFVQFIYPDGGLNWLQGETAGLGLP--DIRAQAGFVAEDG------- 8 YLK2_CAEE/216-3 86.6% 29.4% A--------LPEENTNTFQAAIFI-----TANGTFANFIYSNIGWT---------------QGAEAGFNAGDAT------ 9 7302021/244-404 91.7% 27.6% --------DNSLYTTNTFQMVLAT-----DEVYTYIIFNYAVLNWLSHTEAGGDTTKGEGGVPAYVGFNAGNGTQ----- 10 Q04901/86-233 90.4% 27.0% D-----------GVTFTFQCIVAT-----DGAATFAIFLYPQDGLAVGENAVKGVRN---EVTARAGFNDGGREQL---- 11 A53577/1334-149 92.4% 17.3% ---------GRTLGANTYQAILST-----DGSRSYALFLYQSGGMRWDVTQGLYNRVLMGFSSGDGYFENSPLIFRPAVE 12 Q17494/43-178 85.4% 27.7% -----------ESEGNTFQLALII-----GDSMTFAHFIYSK---------------LNFNTNAIAGFSTRDS------- 13 Q93791/93-232 86.6% 24.2% -------------GPASFQLAIVS-----DGISTYAIFRYESLPWSSSM-----------GYYAQAGFVRSIGKIQ---- 14 YLK2_CAEE/530-6 87.9% 18.4% GAK-----------GNTFQALLIDGSNSKNEKMTFVELMYRDLPWA---------------SGAEAGILSSDAS------ 15 Q17494/637-773 81.5% 17.5% -------------NFNSFQIVLAE----SDKDATILSLIYE-------------------KVQARGPMTGIST------- 16 YF1M_CAEE/216-3 93.6% 16.0% RSDIDA------GQTGTYQVIWLTD---STARLSYVIINYDRLGFDAQDFRGNSR-----SGRCRAVFNGGNHTGTVEVD consensus/100% ................oaQhhh.......st..ohh.h.Y.......................s.h.h.t.......... consensus/90% ...............soaQhhl.......st..oah.h.Y.......................s.hsh.tt.h....... consensus/80% ..............hNTaQhhlhs.....stt.oas.F.Y.p.sht.................u.sGFssust....... consensus/70% ..............hNTFQslLhs.....stphoashFhY.p.sht..............t..A.sGFssuss....... cov pid 161 . . . ] 199 1 O08523/98-254 100.0% 100.0% NFFSLPGSRTPEIVNIQETTNV--NVPGRWAFKVDGKEI 2 O88322/108-276 98.7% 28.1% -LYFSLTNTEQFVKNLYQLSNL--GIPGVWAFHIGSRFA 3 YMS5_CAEE/287-4 94.9% 30.5% ----LPYSGEGRLWKLGYFSNV--LTPGRWIHRVDEVII 4 NIDO_MOUS/106-2 96.8% 28.8% GAYNIFANDRESIENLAKSSNA--GHQGVWVFEIGSPAT 5 CAB85602/141-29 94.3% 21.0% SPLMSQPVWERYRPDRFLNSNS--GLQGLQFYRLHREER 6 AAF23818/391-54 94.3% 21.6% SPLTFRPAMEKYRPDRFLNSKL--GIRGLQVYRLHREER 7 7303761/107-262 96.8% 26.1% RFYTLNGSGSENARFLSESTNL--GVPGVWLFEVAPIEN 8 YLK2_CAEE/216-3 86.6% 29.4% NHFKLPTSGTPNIMYLEEYGNT--GIPGEWMFELSELRV 9 7302021/244-404 91.7% 27.6% -------AYEYNPYSQNMVIRD--LANRGWANGFPGRHI 10 Q04901/86-233 90.4% 27.0% --------EILSADELLGGDNA--GSQGQWIFQIGGIMF 11 A53577/1334-149 92.4% 17.3% ------KYRPDRFLTPNYGSGD--SRSTGYTGRCGPTTG 12 Q17494/43-178 85.4% 27.7% -SYSLPDSATNDAILLSEKSDI--GIPGEWLFRVDGDRI 13 Q93791/93-232 86.6% 24.2% ---TNVNSGGPDVKELVNLSNN--QFGNFFIFRVSGSAI 14 YLK2_CAEE/530-6 87.9% 18.4% SSILLPASGTEAISQLSKNSNI--KQPGTWLYRIDKAQL 15 Q17494/637-773 81.5% 17.5% ----PSRFLMLPNNRLASGSNV--GQPGKWMYRVDIADL 16 YF1M_CAEE/216-3 93.6% 16.0% ----PTQPYKNTPKVLAQRSGVPHMVRGRYMFRVDDVVR consensus/100% ....................t......t..h.th..... consensus/90% ...................st......s..hhpht...h consensus/80% .......sht..h..h...os...th.Ghahaclst..h consensus/70% .......shp.th.pl...osh..th.Ghahaclst.th