cov pid 1 [ . . . . : . . . 80 1 Q7USA4_RHOBA/40-187 100.0% 100.0% --HGAKGTSD-LVEQGWV--TARAGWGE----VRKNANC------SGGPVLVQNQ----PAGKASIGTHA--PSVIEFDV 2 Q7UJN6_RHOBA/49-188 85.8% 11.2% --PTTTKSIW-LSTIRPQ--SSEVGW---------LRATYNSVPDKNRLLSLGG-----DYFAHGIYAHA--PAKHVYEL 3 Q8A1R7_BACTN/22-163 91.2% 16.2% ---EEVKEIW-LDELGESS-YYIQDWGL----PRINKAV------TMTPLTVKG-----IVYERGIGTHA--ISRMLFDI 4 Q9KYF3_STRCO/54-199 89.9% 9.4% ---PPVPAVYQWSELAYD--VSGDGTGP------EMRLAGSSWVWQRSDLSVDD-----VSYAHGVTVNG--RSSVTIDL 5 Q6RUF5_CLOPE/37-205 95.9% 10.9% ---EESRDVY-LSDLDWL--NATHGDDTKSKIVQKNHPFTPGNNNQSTKISLKMEDGSISEFEKGLGTIAGSPSTITYDI 6 Q4H941_9DEIO/77-232 95.9% 15.4% ATSTPTDLGL-TTDLKWD--SASSGYGP----VELNKSNNTKTGGDGQTLTIGG-----QTYALGLGAHA--NSDIRYTL 7 Q4H8X9_9DEIO/59-204 90.5% 15.2% ----DPGDNT-LSFEPWI--SATSGFGP----IERDRSNGEKQGGDGHPLTLGG-----QTFARGFGVHA--DSDMTFSL 8 Q4H613_9DEIO/68-214 91.2% 18.2% ---ISQGDNT-LSYENWT--SATNGWGP----IERNRSNGEKNAGDGRTLTIGG-----QTYATGFGVHA--GSSMTFSL 9 Q4H941_9DEIO/23-170 91.2% 17.5% ---QASGDKF-LSDLPTAT-PPVNGYGP----YELDTSNGERLGGDGRPLTIGG-----TTYRKGLGVHA--ASELVYDL 10 Q4H8Y3_9DEIO/77-231 95.3% 14.9% ---GLSGDNS-LSDLSWTPGSAANAWGP----IELNRSNGEKNAGDGRTLTIGG-----QSFPKGLGMHA--NGEVSYAT 11 Q4H5W2_9DEIO/10-156 91.2% 13.2% ---PPSGDVF-VSDLDWN--TPSNGWGP----IEQDLSNGEKGLADGRTLTIGG-----QSFPKGLGMHA--NGSVTYLL 12 Q9S2C9_STRCO/53-199 91.2% 18.9% ---LPAGESA-LSDADPL--SATNGWGP----VERDQSVGERGAGDGNPITIGG-----TTFAKGLGVHA--SSSVEYYL 13 Q82N28_STRAW/53-199 91.2% 18.2% ---PPSGVSY-LGDLPWM--STTNGWGP----VERNTSNGESAAGDGRPITVDG-----VVHAKGIGVHA--ESTIAYYT 14 Q8XKW1_CLOPE/13-160 91.9% 17.5% --AVTDKETQ-LSDLNWK--SATIGSGS----VRKDRAV------SGNQIRLLNEDNSVQTFAKGIGTHS--YSEIVYNS 15 Q8XKW1_CLOPE/10-157 89.2% 13.5% ---VVSRKEY-MSDLTPK--QSSNGWGT----VRKDKSISGGVIG----LTRDGDF---VDYNKGLGLHS--NAEYVYDL 16 Q8XJ86_CLOPE/90-238 92.6% 18.2% ---AVETSVY-LSELEWE--SASTGYGE----IQKDASC------DGNTITLKGENGEKVSYDKGIGTHA--HSEIVYSL consensus/100% ...........hs...........s........................l.h.........h.huhhh.u...u.h.h.. consensus/90% ......t....hs........s..u.s.........ts.......p.t.lplts.......a.tGhshpu...uph.a.h consensus/80% ....sstp.h.lo-hs....ssssGaG.....hphspus......psp.lolts......sat+GlGsHA...uphhatl consensus/70% ....sstpsh.LS-lsh...sussGaGs....lchspus..t...supsloltG......sas+GlGsHA...Sphsasl cov pid 81 . 1 . . . . : . 160 1 Q7USA4_RHOBA/40-187 100.0% 100.0% PP--GFDKLTVTGALESGGTNQQNGNN--TSVRFAVYASAAPNDLNE-----VDAKAVDQQRLPEQAVAGLEVAEGLEVT 2 Q7UJN6_RHOBA/49-188 85.8% 11.2% DG--NWKRLRGRSGI--------QGNL-FGQVDFEII-GDGKSLWKA------TRVTAGQGNAFDIDV-----SKVQTLT 3 Q8A1R7_BACTN/22-163 91.2% 16.2% GK--KAKTLSGLAGADDN-----TPFA--CNLQFKIL-GDRKELWRS-----GIMRKGDPAKPFNIDL-----SGIDKVL 4 Q9KYF3_STRCO/54-199 89.9% 9.4% NR--ECSSYDALAGVDDL-----TMKL--GKVHFSVY-ADDVRLWNS-----GMVKGGDPAVPVHVDI-----TGRETLR 5 Q6RUF5_CLOPE/37-205 95.9% 10.9% SG-AGVTKFFSYLGIDRSANPINEQYA--KVDKIEVV-VDGKVIYSTINQFPNGLTYETPAIKVDLNIP----ENAKRLQ 6 Q4H941_9DEIO/77-232 95.9% 15.4% PG--DCATFTATVGVDDE-----VGNL--GSVVFQVWDGTTTKLYDS-----GVLRGSDGPKEITVPLTRSDGTAVRNLR 7 Q4H8X9_9DEIO/59-204 90.5% 15.2% AG--RCQAFSALVGVDDE-----VGER--GSVVFQVF-ADGTKVYDS-----GVQRGSDGPQALNVDV-----TGKDELR 8 Q4H613_9DEIO/68-214 91.2% 18.2% AG--QCQTFTAQVGIDDE-----VGNR--GSVVFQVF-ADGTKVYDS-----GVLRGTDAPKTLSVSV-----AGKQELR 9 Q4H941_9DEIO/23-170 91.2% 17.5% GG--NCSTFTAEVGVDDE-----VGDR--GSVVFQVF-ADGTELFNS-----GVRTGKDPALAVNQSV-----AGKKQLK 10 Q4H8Y3_9DEIO/77-231 95.3% 14.9% GG--SCSTFTATVGIDDE-----VGDR--GSVVFEVWDGTTTRLYAT-----PILRGSDPPFNLTVPLTRPDGSAVRDLR 11 Q4H5W2_9DEIO/10-156 91.2% 13.2% GG--RCSTFTASVGVDDE-----VGDR--GSVVFQVF-GDGTKLYDS-----GVRRGTDGPQALNVNV-----SGVQQLK 12 Q9S2C9_STRCO/53-199 91.2% 18.9% GG--TCGKVTAQVGVDDE-----SGDK--GTVAFEVW-ADETRAAST-----GTLTNADPARAVSADV-----SGADIVR 13 Q82N28_STRAW/53-199 91.2% 18.2% GR--SCETVTADVGVDDE-----QDTN--GSVTFEIW-ADGTRVAST-----GVLTTAMPARPLSADV-----TGAQVVR 14 Q8XKW1_CLOPE/13-160 91.9% 17.5% EG---YDIFDTWVGIDRH-----VADKKVSSVKFKVY-VDGELKAET-----DVMRIDTPKKRLVVDV-----RNSKEIK 15 Q8XKW1_CLOPE/10-157 89.2% 13.5% EG-KDYDYFESYVGVDKA-----MSSRPASSVIFKVL-VDGEEKFNS-----GVMRSTTPQKYVKVDV-----KNAKELK 16 Q8XJ86_CLOPE/90-238 92.6% 18.2% EGLDYYDYFETFVGVDQE----MAGTV--ASISFEVY-LDNEKVFDS-----GLMTGDTKQKHVKVPI-----AGKNTLK consensus/100% .....ht.h.s..uh..............t...htlh..st...htt........h..........sl.....tt...l. consensus/90% .t...hthhps.sGl-p............spl.Fplh.sst..hhps.....shhp.ts....hp.sl.....tthp.lp consensus/80% ss..thpthpu.sGlDct......sph..usVhFpVh.sDspphhso.....shhpssss.h.lphsl.....sshpplp consensus/70% sG..phpphsu.lGlDcp.....sust..uoVhFpVa.uDspclaso.....sshpsssssp.lslsl.....sshppl+ cov pid 161 . . ] 184 1 Q7USA4_RHOBA/40-187 100.0% 100.0% LM------GSEPDLSSLTNLDIDH 2 Q7UJN6_RHOBA/49-188 85.8% 11.2% LKVTDGGNGRGGDWGIWVEPMLTR 3 Q8A1R7_BACTN/22-163 91.2% 16.2% LLVEECGDGMMYDRADWLNVKFTT 4 Q9KYF3_STRCO/54-199 89.9% 9.4% LVTEPHSHFDSLALADWAQSRFTC 5 Q6RUF5_CLOPE/37-205 95.9% 10.9% LK-SYAGEKTWGDEVVYADAKFTA 6 Q4H941_9DEIO/77-232 95.9% 15.4% LVVTDAGDGISYDHADWAMPKVLS 7 Q4H8X9_9DEIO/59-204 90.5% 15.2% LVVTDAGDGLFYDHADWAQPMLHG 8 Q4H613_9DEIO/68-214 91.2% 18.2% LVVTDAGDGISYDHADWANPKLLN 9 Q4H941_9DEIO/23-170 91.2% 17.5% LVVSGTADGISYDHADWANAKISC 10 Q4H8Y3_9DEIO/77-231 95.3% 14.9% LVVRDAGDGISYDHADWANPTLSC 11 Q4H5W2_9DEIO/10-156 91.2% 13.2% LVVTDAGDSISYDHADWANAKLSC 12 Q9S2C9_STRCO/53-199 91.2% 18.9% LVVTDAGDGSGYDHADWADLRVTC 13 Q82N28_STRAW/53-199 91.2% 18.2% LVVTDGGNGITSDHADWADAKLSC 14 Q8XKW1_CLOPE/13-160 91.9% 17.5% LVVDVADNGNTWDHADWADAKFRN 15 Q8XKW1_CLOPE/10-157 89.2% 13.5% LIVNDAGDGDSSDHASFGDAKLAT 16 Q8XJ86_CLOPE/90-238 92.6% 18.2% LVVKDGGDSIGSDHGSFGDAKLTK consensus/100% Lh..........s.s.hh...h.t consensus/90% Lh.p.tspt...Dhusasp.hh.t consensus/80% LlVpssusu.t.Dcusaupschps consensus/70% LlVpsuGcG.shD+AsWuss+lss