Family alignment for the PAM domain, displayed in

                     cov    pid   1 [        .         .         .         .         :         .         .         . 80 
 1 PSD3_DROME/165 100.0% 100.0%     KNSLEGIRSFLHARLRTATLRNDFEGQAVLINCLLRNYLHYALYDQADKLVKKSVYPE--------------SASNNEWA    
 2 PSD3_HUMAN/204 100.0%  66.5%     LDKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHYSLYDQAEKLVSKSVFPE--------------QANNNEWA    
 3 PSD3_TOBAC/158  99.4%  49.7%     TGDLAEIRGYLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFE--------------AHSNQQFS    
 4 PD32_ARATH/175  99.4%  42.0%     TNDLAEIRSTLLALHHSATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFE--------------AHSNQQFC    
 5 PSD3_CAEEL/172 100.0%  48.6%     EGRLFDHQGFLNSRLRTATLRNFSESQAVLICWLLRCYLINRQYQSAAHLVSKVAFPD--------------NASNNDLA    
 6 RPN3_YEAST      99.4%  35.6%     DNQNIILRSTMMKFLKIASLKHDNETKAMLINLILRDFLNNGEVDSASDFISKLEYPHT-------------DVSSSLEA    
 7 RPN3_SCHPO/166 100.0%  47.1%     CNRSVECRNTLLSVHRTASLRHDSETQAMVLTLLLRNYIQFNLYDQADRLVSKTSFLT--------------NASNNLAI    
 8 EAA22203       100.0%  39.8%     RGNISQVRQELLFIYRNACLHRDIMTQTVVLNLILRDYIKNNLYDMAVKFVSKTLFPE-------------NMFSNVQHA    
 9 AAL72628/1-190  99.4%  35.6%     SKGNDELLGRLMSLYRALCVRHDEVGQEMLLNDILALLTLNHQHDLAERVIATCEISL-------------PHRSNNQAA    
10 EAA30401        98.8%  47.1%     QSPIVSIRPILLAALRTAVLRKDIDTQASVIVLLLRNYLLTSHISQADLLV-QHTQFP-------------ENAANNQVA    
11 YJ54_YEAST/117  98.3%  14.9%     TIHRSFTICLNDRNPRLNENKK--IGCYMFANLEFSIYHRLSNKDMIKNLV-KVLESRVNARDIPPLNKSLAMEHKSQVV    
12 CSN2_HUMAN/152  98.3%  10.7%     QKILRQLHQSCQTDDGEDDLKKG-TQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIK------------SAIPHPLIMG    
13 Q8SRT7/98-265   92.5%  12.1%     YLARKNECQDNSALFSLLVTNKE-LGNEYTVSVITNCLLDMLIGNKIFQRI-DNS-----------------IVTTSEQA    
14 YE18_SCHPO/146  96.5%  15.6%     RLINRAFTICINDRAPLSTSRK--WGAYYIMGLLFKLYLRLDCVHLTNNVL-RAMKVVE--------LPDISLFPKSHVV    
15 EAA34699/190-3  95.4%  16.3%     RQLNRIFTLCLNDRAPLEESRK--WGIYYIINLLFKTYFKLNSASLSKNIL-KTLSAYRGD------MPPLSAFPKSQQV    
16 Q8GWE6/158-335  95.4%  16.2%     LKAAGSLLMKVFGVLAGKGPKR--VGALYVTCQLFKTYFKLGTVNLCRSVI-RSIETAR--------IFDFEEFPRRDKV    
17 O96149/168-357  95.4%  14.0%     TIEVLNSIRGKIGIVKGDIEKH--GGFVILMFQSIKLCMKLNNMQITSSFL-KIINST---------DINYSYIPTSFIV    
18 Q08231/132-332  98.3%  13.0%     RLFNSIKPPRGNASSTNIPGKQR--ILLYLVNKLNNIYFRIESPQLCSNIF-KNFQPK-------SMLAHFNEYQLDQQI    
19 Q9Y820/144-329  96.5%  15.1%     NVLRTFNSILSDRQQNINPSKKD--AIFCIANLLCLLYFRLKQIRLCQTIQANVISSG----------ADISRATMAELV    
20 EAA12851        95.4%  17.5%     SLMSCFRVCAGDTRSSDEDTKR--LGMLNLVNQLLKVYFRINKLHLCKPLI-RAIDSS----------NFKDSFTLAQRI    
21 Q9NUK6/180-366  95.4%  16.9%     LLMSCFRVCASDTRAGIEDSKK--WGMLFLVNQLFKIYFKINKLHLCKPLI-RAIDSS----------NLKDDYSTAQRV    
22 Q9VTL1/123-310  95.4%  17.5%     CIMACFRVCAADGRASEEDTKR--LGMMNLVNQLFKIYFRINKLHLCKPLI-RAIDNC----------IFKDSFPLPEQI    
23 T15664/107-294  95.4%  15.2%     ITEECYRTCVSDVHAEEGTTKK--VAMLNMTNQLFQIYFQINKLNLLKPLI-RAIDNC---------GSLYHDFLMSDKV    
24 EAA35198        94.2%  16.5%     FANLTLKLLFAVSRPIARPSRK----TISERNTHEHTLLQCDKSRLAVQMF-TNLSTS---------GPALSLYPASQRV    
   consensus/100%                   ....................pp........h......hh.....p....h..p...........................    
   consensus/90%                    ............t.......+p...t...hhs..hp.hh..t..p.h..hh.p....................h.....h    
   consensus/80%                    ......hh.h..sh.t.ts.++...s.h.lhs.lhp.ahp.p.hp.sp.hh.ps...................hs.sp.s    
   consensus/70%                    ph..t.hhthh.shhphts.++...u.hhlhshlh+.Yhphsphp.sppll.+sh.sp..............thspsphs    

                     cov    pid  81          .         1         .         .         .         .         :         . 160
 1 PSD3_DROME/165 100.0% 100.0%     RFLYYLGRIK-AAKLEYSDAHKHLVQALRKSPQHAA--------IGFRQTVQKLIIVVELLLGN--IPERVVFRQAGLRQ    
 2 PSD3_HUMAN/204 100.0%  66.5%     RYLYYTGRIK-AIQLEYSEARRTMTNALRKAPQHTA--------VGFKQTVHKLLIVVELLLGE--IPDRLQFRQPSLKR    
 3 PSD3_TOBAC/158  99.4%  49.7%     RYLFYLGKIR-TIQLEYTDAKESLLQAARKAPQAAL---------GFRVQCNKWAIIVRLLLGE--IPERTVFMQKGMEK    
 4 PD32_ARATH/175  99.4%  42.0%     RYLFYLGKIR-TIQLEYTDAKESLLQAARKAPVASL---------GFRIQCNKWAIIVRLLLGE--IPERSIFTQKGMEK    
 5 PSD3_CAEEL/172 100.0%  48.6%     RYMYYQGRIK-ALQLDYNSAAGYFLQAQRKAPQEGA--------IGFKQAVQKWVVVIGLLQGE--IPDRSVFRQPIYRK    
 6 RPN3_YEAST      99.4%  35.6%     RYFFYLSKIN-AIQLDYSTANEYIIAAIRKAPHNSK-------SLGFLQQSNKLHCCIQLLMGD--IPELSFFHQSNMQK    
 7 RPN3_SCHPO/166 100.0%  47.1%     RYQYYLGRIR-AIQLDYTTAHEHLVSAIRKAPNTVY-------AVQFLEAVYKLHIVVQLLMGE--IPERRIFRQKSLEK    
 8 EAA22203       100.0%  39.8%     RYLYYIGKIL-AIQLDYSESHNKISQALRKAPQNAN------MAKGFKLEATKLEIVVELLMGD--IPDRSLFTNKIMRK    
 9 AAL72628/1-190  99.4%  35.6%     RYFYYVGLTH-ALRLGYVEADQFLQYALRKAPERAS---------GFRVAATKLSLVVQLLLGE--IPPRSDFLQKDMRE    
10 EAA30401        98.8%  47.1%     RFLYYLGRVR-AIQLRYTEAHEHLTAATRKAPSSAC-------ALGFSQTATKLLLVVELLMGD--IPDRAIFRQLTMEA    
11 YJ54_YEAST/117  98.3%  14.9%     LYNYYLGQYYGCLENDHERGFFHLNEALLQCPMLYVESTGKFVLQGQMEKIMILLVPLALLTKRL-YPHWDHPVIAGVIT    
12 CSN2_HUMAN/152  98.3%  10.7%     VIRECGGKMH-LREGEFEKAHTDFFEAFKNYDESGS---------PRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKND    
13 Q8SRT7/98-265   92.5%  12.1%     RYNYYNGIIF-MVEGDYESA-LKCFHTCVILST------------NRDLVLGAEKRVILCMLLS--SDYSIPYPCKPSLR    
14 YE18_SCHPO/146  96.5%  15.6%     IFHYYLGIVA-FLNQNYKNASAELEIAFSLCHKGYN---------RNLELILSYWIPTRILVNHQ-LPTKNLLSKFPNLA    
15 EAA34699/190-3  95.4%  16.3%     TFKYYEGVLC-FLEENYFQAEEHLTQAWSLCHKDAM---------KNKELILTYLVPCHLLTTHT-LPSQKLLEPYPRLQ    
16 Q8GWE6/158-335  95.4%  16.2%     TYMYYTGRLE-VFNENFPAADTKLSYALQNCNPKRE---------RNIRMILKYLVPVKLSLGI--IPKDELLRNYNLHE    
17 O96149/168-357  95.4%  14.0%     LFKNQLGKLY-LQKLEYEKAESEFIWAFSNSNKSKI---------EFRKIILESLITIRLNKGL--YPPKKLLQKYKLSI    
18 Q08231/132-332  98.3%  13.0%     EYRYLLGRYY-LLNSQVHNAFVQFNEAFQSLLNLPL---TNQAITRNGTRILNYMIPTGLILGK--MVKWGPLRPFLSQE    
19 Q9Y820/144-329  96.5%  15.1%     TFRYYLGRCH-LYQRKIHQAKDHLLFSFLQCPDECY---------HQKRLSLIYLTTCLLILGK--SPTKGLLEKYKLTA    
20 EAA12851        95.4%  17.5%     TYKYFAGRKA-MYDSDFKNAEEYLSFAFDNCPRRFT---------KNKRLILIYLTPVKMLLGY--MPRKEVLERYNVLQ    
21 Q9NUK6/180-366  95.4%  16.9%     TYKYYVGRKA-MFDSDFKQAEEYLSFAFEHCHRSSQ---------KNKRMILIYLLPVKMLLGH--MPTVELLKKYHLMQ    
22 Q9VTL1/123-310  95.4%  17.5%     TYKYFVGRRA-MFDSNYQAAVQYLSYAFSNCPDRFA---------SNKRLILIYLVPVKMLLGY--LPSKSLLQRYDLLL    
23 T15664/107-294  95.4%  15.2%     AYNYFLGRKA-MFDADLNLAEKSLLYAFRNCPADSM---------SNKRKILIYLIPVKMFLGH--MPTSQLLHEYRLDE    
24 EAA35198        94.2%  16.5%     TFLYYLGRFN-FDHGHYMRAHWCFEEAYRQCHPQFL---------KHRRQILIYWVPSNLLLGR--FPSQMLLSRPEAAG    
   consensus/100%                   .h....u.h..h.p.th..u...h..s............................h...h.......s............    
   consensus/90%                    ha.ah.Ghh..hhp.ph.tA...h..Ah..h..............t.h..h..hhh.hthhht....P....h......t    
   consensus/80%                    tahaahGphh.hhp.pappAtt.h..Ahpps.tt...........t.h..h.hhhlshthlhsp..hPppt.htp..h.t    
   consensus/70%                    pahYYlG+ht.hhp.cappAcppl..Ahppsspphh.........t.cphhhthhlslpLLhGc..hPppplhpphthtp    

                     cov    pid 161          .         .         .         2         .         .      ] 227
 1 PSD3_DROME/165 100.0% 100.0%     SLGAYFQLTQ---------------------------AVRLGNLKRFGDVVSQYGPKF--QLDHTFT    
 2 PSD3_HUMAN/204 100.0%  66.5%     SLMPYFLLTQ---------------------------AVRTGNLAKFNQVLDQFGEKF--QADGTYT    
 3 PSD3_TOBAC/158  99.4%  49.7%     ALRPYFELTN---------------------------AVRIGDLELFRKVAEKFSSTF--SSDGTNN    
 4 PD32_ARATH/175  99.4%  42.0%     TLRPYFELTNVSSIFFTFLTYALIKVFLLILLFKFCKAVRIGDLELFGKIQEKFAKTF--AEDRTHN    
 5 PSD3_CAEEL/172 100.0%  48.6%     CLAHYLDLSR---------------------------GVRDGDVARFNHNLEQFKTQF--EADDTLT    
 6 RPN3_YEAST      99.4%  35.6%     SLLPYYHLTK---------------------------AVKLSDLKKFTSTITKYKQLL--LKDDTY-    
 7 RPN3_SCHPO/166 100.0%  47.1%     TLVPYLRISQ---------------------------AVRIGDLCAFTDALSKYEAEF--RFDGLYT    
 8 EAA22203       100.0%  39.8%     NLIPYKHVVT---------------------------AVRNGDINKFASVMNNYKKLF--VKDGVYL    
 9 AAL72628/1-190  99.4%  35.6%     CLSPYLQLTS---------------------------CVRFGQLGRFMSILQQHKAIF--EHDRTYS    
10 EAA30401        98.8%  47.1%     TLHPYFLLVR---------------------------AVRVGNLEDFETTIAQHADTF--RRDGTY-    
11 YJ54_YEAST/117  98.3%  14.9%     RSKRLSQVYPTL-----------------------VRSVISGNLSLYEATAASHERFF--LSQGLHV    
12 CSN2_HUMAN/152  98.3%  10.7%     PEILAMTNLVS--------------------------AYQNNDITEFEKILKTNHSNI--MDDP-FI    
13 Q8SRT7/98-265   92.5%  12.1%     ---IYFKLAS---------------------------AVKRADIKKFEETLESNKDEL--MSQGLYF    
14 YE18_SCHPO/146  96.5%  15.6%     --SVYIPLTR---------------------------ALKSGNLGEFGKCLQKNETLL--AKTKIYL    
15 EAA34699/190-3  95.4%  16.3%     ----KLFLPLS-------------------------NCIKKGELHAFDLALQQGEDEF--VKRRIYL    
16 Q8GWE6/158-335  95.4%  16.2%     ----YTKIVQ---------------------------ALRKGDLRLLRHALQEHEDRF--LRSGVYL    
17 O96149/168-357  95.4%  14.0%     ----YIDIIY---------------------------SIKRGNIFLYNNVMNNFSSYF--FHKGLNE    
18 Q08231/132-332  98.3%  13.0%     TIDNWSVLYK---------------------------HVRYGNIQGVSLWLRQNERHL--CARQLLI    
19 Q9Y820/144-329  96.5%  15.1%     ---AFEPLIK---------------------------ALKSGDIKSFRLSLEDNSRRKWFIKRGIYL    
20 EAA12851        95.4%  17.5%     ----FHDLAS---------------------------AVKEGNVRRFDEAIRRHEMFF--INAGVYL    
21 Q9NUK6/180-366  95.4%  16.9%     ----FAEVTR---------------------------AVSEGNLLLLHEALAKHEAFF--IRCGIFL    
22 Q9VTL1/123-310  95.4%  17.5%     ----FLDLAM---------------------------AMKAGNVNRFDEIVRDQELVL--IRSGIYL    
23 T15664/107-294  95.4%  15.2%     ----FQDVVA---------------------------GVKDGNLAQLDGALAANEAFF--IKCGIFL    
24 EAA35198        94.2%  16.5%     ----FGDVFI-----------------------PICAAIRTGNFVAFHQALNASRDWL--WDRGLYL    
   consensus/100%                   ....h................................th..sph..h....tt.t..h....t....    
   consensus/90%                    ....h..l.............................slp.usl..ht.hhtp.t..h...tpthh.    
   consensus/80%                    ....ah.lh............................ul+.Gslt.atthhpp.pt.h...tptha.    
   consensus/70%                    ....ahplsp...........................Al+.GslttFppslpp.cphh..hpsshah