cov pid 1 [ . . . . : . . . 80 1 Q9VSV9/331-468 100.0% 100.0% PINRVVISHTAAEG--CESRDSCSYWTRVTQSRHMDTFNW--SQVGYNFLVGG--------------DGRIYEGRG---- 2 Q9HD75/61-208 100.0% 33.6% PVNVLVIHHVPGLE--CHDQTVCSQRLRELQAHHVHNNSG--CDVAYNFLVGD--------------DGRVYEGVG---- 3 Q9HD75/216-353 98.4% 34.4% PAKYGIIIHTAGRT--CNISDECRLLVRDIQSFYIDRLKS--CDIGYNFLVGQ--------------DGAIYEGVG---- 4 Q9VSW0/37-174 98.4% 38.3% PVSNIIIHHTATEG--CEQEDVCIYRMKTIQAFHMKSFGW--VDIGYNFLVGG--------------DGQIYVGRG---- 5 Q9VXN9/188-324 98.4% 35.2% PVKYVVILHTATES--SEKRAINVRLIRDMQCFHIESRGW--NDIAYNFLVGC--------------DGNIYEGRG---- 6 Q9GK12/40-178 98.4% 35.7% PVRYVVVSHTAGSH--CDTPASCAQQAQNVQSYHVRNLGW--CDVGYNFLIGE--------------DGLVYEGRG---- 7 O75594/42-180 98.4% 36.4% PLRYVVVSHTAGSS--CNTPASCQQQARNVQHYHMKTLGW--CDVGYNFLIGE--------------DGLVYEGRG---- 8 O88593/29-167 98.4% 40.3% PVRYVVISHTAGSF--CNSPDSCEQQARNVQHYHKNELGW--CDVAYNFLIGE--------------DGHVYEGRG---- 9 Q9V3B7/33-170 98.4% 34.4% YLSYAIIHHTAGSY--CETRAQCNAVLQSVQNYHMDSLGW--PDIGYNFLIGG--------------DGNVYEGRG---- 10 Q9V4X2/33-169 98.4% 33.6% YLSYAVIHHTAGNY--CSTKAACITQLQNIQAYHMDSLGW--ADIGYNFLIGG--------------DGNVYEGRG---- 11 Q9VS97/35-169 97.7% 27.1% PLPRAVIAHTAGGA--CADDVTCSQHMQNLQNFQMSKQKF--SDIGYHYLIGG--------------NGKVYEGRS---- 12 O76537/29-166 98.4% 34.4% PVELVIIQHTVTST--CNTDAACAQIVRNIQSYHMDNLNY--WDIGSSFIIGG--------------NGKVYEGAG---- 13 Q9XTN0/36-173 98.4% 31.2% PVSLVIVQHTVTPF--CRTDAGCEELVRNIQTNHMEALQY--WDIGPSFLVGG--------------NGKVYEGSG---- 14 O97369/34-170 98.4% 32.0% PVNIVIIMHTVSTQ--CTTDEACEIRMQSLQNYHMEDVGN--WDIGSSFYVGS--------------NKKIYEGVG---- 15 BAB33295/36-17 98.4% 34.4% PIDLVVIQHTVSND--CFTDEECLLSVNSLRQHHMRLAGF--KDLGYSFVAGG--------------NGKIYEGAG---- 16 Q9VYX7/49-186 98.4% 27.9% RPIRYVVIHHTVTGE-CSGLLKCAEILQNMQAYHQNELDF--NDISYNFLIGN--------------DGIVYEGTG---- 17 Q9VV97/36-174 98.4% 30.0% GAVDYVIIHHSDNPNGCSTSEQCKRMIKNIQSDHKGRRNF--SDIGYNFIVAG--------------DGKVYEGRG---- 18 Q9VV96/31-165 97.7% 31.0% VPVRLIIIHHTVTAP-CFNPHQCQLVLRQIRADHM-RRKF--RDIGYNFLIGG--------------DGRIYEGLG---- 19 BAB33294/42-17 97.7% 30.0% KPVPYVIIHHTAIPTVCNTTTQCMRDMRSMQKYHN-SLGW--GDIGYHFCVGG--------------DGVAYEGRG---- 20 Q9VGN3/23-162 98.4% 30.0% GPAPYVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGW--NDIGYSFGIGG--------------DGMIYTGRG---- 21 Q9QXZ2/373-511 98.4% 24.6% LPLGFLYVHHTYVPAPPTTFQSCAADMRSMQRFHQDVRKW--DDIGYSFVVGS--------------DGYLYQGRG---- 22 Q9UC60/391-531 98.4% 25.2% LPLGFLYVHHTYVPAPPTDFTRCAANMRSMQRYHQDTQGW--GDIGYSFVVGS--------------DGYVYEGRG---- 23 Q9KZK5/235-396 99.2% 19.6% KKVKTAFVHHSATGNNY-RCSQAPSVIRGIYRYHVHSLGW--RDLGYNFLVDK--------------CGHIYEGRAGG-V 24 O86334/209-373 99.2% 15.7% RGVRAAVVHHTAGSNDY-SPLESAGIVKAIYTYHSKTLGW--CDIAYNALVDK--------------YGQVFEGSAGG-L 25 CWHA_ACHLY/12- 84.4% 12.2% NQTSAVIMHTMEGSY--------AGSISWFQNPSA--------QVSAHYLIRKS-------------DGQITQMVREYHQ 26 AMPD_ECOLI/16- 88.3% 9.8% ETPTLLVVHNISLPPGE----FGGPWIDALFTGTI--------DPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKR 27 12720293/22-17 89.1% 9.2% HDISLLIIHYISLPPEQ----FGGHYIDDFFQGKL--------NPTQHPYFEEIATLRVSAHCLINRQGEITQYVNFNDR 28 AMPD_HAEIN/20- 89.1% 9.2% QDISLLVIHYISLPPEQ----FGGGYVDDFFQGKL--------DPKIHPYFAEIYQMRVSAHCLIERNGRITQYVNFNDR 29 Q9KPE7/16-167 89.1% 9.2% EDISLLVVHNISLPPGQ----FGGPYIEQFFLGEL--------DANQHSFFKVIAKMRVSAHCVIRRDGEVVQFVPFHLR 30 Q9ZGA0/18-169 89.1% 10.5% DAVSLLVIHNISLPPGQ----FGTGKVQAFFQNRL--------DPNEHPYFEEIRHLTVSAHFLIERDGAITQFVSCHDR 31 Q9KIB6/18-168 89.1% 10.5% GEVSLLVIHNISLPPGC----FGTGKVQQFFRNCL--------PADEHPYFASIAALRVSAHFFIERDGAVTQFVSCLER 32 Q9JN37/17-165 87.5% 9.9% MPIDLIVLHNISLPPAR----FGTDDVLAFFTNTL--------DCGAHPYFEQLRDVRVSAHFFIRRTGECVQFASCDAR 33 Q9K0E1/22-170 87.5% 10.5% ETVSLIVLHNISLPPFE----YGTDAVEKLFANRL--------DPDGHPFFSLIHTLRVSSHFLIKRDGETVQFVSCDNM 34 Q9I5D1/7-158 86.7% 11.5% KRVRFLVLHYTALDF--------AASVKALTTG----------AASAHYLIPAPHDPSYKAAGFK--GQRIFNLVAEEDR 35 Q9HT86/24-165 85.2% 10.8% SRVQFIVLHYTSTDL--------PHSLGILTHG----------GVSAHYLIGDDEP------------ATVYRLVDENRR 36 YBJR_ECOLI/32- 85.9% 13.2% PRIKVLVIHYTADDF--------DSSLATLTDK----------QVSSHYLVPAVPPRYN-------GKPRIWQLVPEQEL 37 15695/1-151 89.8% 13.6% ATTEAIFVHCSATKPSQ---NVGVREIRQWHKEQGW------LDVGYHFIIKR--------------DGTVEAGRDELAV 38 Q9FZS0/158-310 88.3% 8.3% SKPTMFLIHTQEGGGGD---AAAENLAKWFQNGNG---------VSYHYTISQAS----------DGGVTVVDCVDTDRA 39 AAK24537/8-145 87.5% 13.5% AVPDTVILHYTGMETG-------EAAIERLRDPEA--------KVSAHYCVEE--------------DGRIVRLVAEERR 40 Q9RJZ8/55-186 85.9% 13.9% YPVDFVVVHVTQETY--------ADTLSIFRDPEK--------QVSAHYVVRSS-------------DGHVAQCVRETDI 41 O86582/86-215 85.9% 14.0% FGIDMVIVHVTQGSF--------DSAVRAFQDPGH--------KAAAHYIVGQ--------------DGRVTQMIRELDV 42 Q9S2M7/304-443 85.9% 11.2% HEITSIVIHDTEGSY--------SSALGVFQNSLS--------YASAHYLIRAS-------------DGLVTQMVETKNE 43 Q9FC03/257-395 85.2% 6.9% IRIDTIVIHDLESTY--------DAGVAGLANPTN--------PASTHYVMSSS--------------GAVTQMVPTKDI 44 Q9K4H5/267-407 85.2% 10.4% QRIRYIVVHDTEGTW--------NGVLNMVQDPT---------YVSWNYTLRST-------------DGHIAQHVKAKDV 45 O86919/542-681 85.2% 8.8% GKPEGIVMHDTANDNS-----TITGEINYMKNNYTS--------AFVHAYVD---------------GDRIIETANTDYL 46 AAK17065/372-5 85.2% 9.5% GRPEGIVVHDTANDNS-----TIDGEINYMKNNYQS--------AFVHAFVD---------------GNRIVETAPTDYL 47 Q9LAA1/291-430 85.2% 7.4% GKPEGIVIHDTANENS-----TLNNEVAYMKNNWQN--------AFVHGFVD---------------GNRIVETANTDYL 48 Q9EXF2/105-246 85.2% 8.1% GKPEGIVIHETANNSS-----TITGEINYMSTNYNN--------AFVHAFVD---------------KSRIIQIHPTENG 49 Q9S3T5/94-234 85.2% 8.7% GTYMGVVIHEVGEDNR-----PLQVWVDRMYETYTR--------AFVHAFVD---------------NNEIHLTAPAEYY 50 ALYS_BPA51/12- 86.7% 12.0% KGANFVIAHETANSKS-----TIDNEVSYMTRNWKN--------AFVTHFVGG--------------GGRVVQVANVNYV 51 Q38658/10-151 85.2% 9.2% QPYRQVHAHSTGNRNS-----TAQNEADYHWRKDPEL-------GFFSHVVGN---------------GRVMQVGPVNNG 52 ALYS_BPR1T/12- 85.2% 10.1% ASNRYIVIHDTANDNNQ-GDNSATNEASYMHNNWQN--------AYTHAIAGW----------------KVYLVGEPGYV 53 Q9MCC8/13-153 86.7% 10.7% ANRLYIILHDVGAESG------ARANAAYFKNNISAE------IAYTAFVVGD--------------GGQVYQVGEPGYV 54 P79668/188-338 91.4% 7.3% SNPKGIVIHNDAGSK----GATAEAYRNGLVNAPLSRLE----AGIAHSYVS---------------GNTVWQALDESQV 55 O56788/178-326 90.6% 10.0% YNPVGVILHNDAGS------MTGLQYKNNLQNAGYNRWA----QGIAHSYIS---------------EGQVWQALGESRI 56 O80122/1-147 89.1% 7.3% HNPTGVVIHNDAGSN----GANTGFYNSWLPTHNPE-------NGFAHVYIA---------------SDGRLQASDFSNK 57 CWLA_BACSU/15- 86.7% 8.3% MKAEYITIHNTANDAS-----AANEISYMKNNSSS---------TSFHFAVD----------------KQVIQGIPTNRN 58 P89924/13-155 86.7% 8.3% MTPTEITLHNTYNDAP-----AINERNNVANNSQG---------TSFHVVVD----------------KEAIQLIPFNRN 59 Q9ZXD7/13-154 89.1% 14.6% MDPAYITVHNTANTAR---GASAAMHARYEKNPET--------PTSWHFTVD---------------DKEIYQHLPLNEN 60 XLYA_BACSU/11- 88.3% 13.2% MTPLYITVHNTANTAV---GADAAAHARYLKNPDT--------TTSWHFTVD---------------DTEIYQHLPLNEN 61 YQEE_BACSU/11- 89.1% 12.5% MAPAYITVHNTANTAR---GADAKMHAKFVKNPNT--------SESWHFTVD---------------DSVIYQHLPIDEN 62 CWLL_BACLI/14- 93.8% 7.9% AGVKGIVMHYTATP-----GASALNERDYFNGTCIAIKRK---ASSAHYFVD---------------RKEAQHIIPENEV 63 CWLX_BACLI/14- 93.0% 7.2% AAVKGIVMHWTATP-----GASALNERNYFNGTCIADKRY---AS-AHYFVD---------------RHEAQHIIPDHEV 64 Q9ZX49/208-349 86.7% 9.6% GRLWGVVCHHTGSD---------NTPSSEIAFHPSL-------GLCSQIHLAR--------------NGTVTLCGVG--I 65 O06288/27-172 89.8% 10.2% RDIRGVMWHHTGNS---------RETAKSIARGRPDLP-----GPLANLHIAH--------------SGVVTIVAVG--V 66 Q56204/13-162 90.6% 11.6% SKVLGIVLHDDVEN------NSAEDYIVWLQQRIDNNEL---EKGWACAYVD---------------KQTCYWFHPSPYV consensus/100% .....hh.H......................................t.hh...................h..h...... consensus/90% ....hlh.H.................ht.h.t...............p.hht................t.hhthh..... consensus/80% ....hllhHpss.s.........tt.hp.h.p............h.hphhls...............tstlhphhs.... consensus/70% ....hllhHpsuts........stt.hp.hpp.p.........thshphhlst..............suplhphhs.... cov pid 81 . 1 . . . . : . 160 1 Q9VSV9/331-468 100.0% 100.0% -WNYMGDHT-------RDNNNNSIGITFLGTFRR-------QEPTPKSLEAYLDNIGGGLILRFVE-------------- 2 Q9HD75/61-208 100.0% 33.6% -WNIQGVHT-------QGYNNISLGFAFFGTKKG-------HSPSPAALSAMENLITYAVQKGHLS---------SSYVQ 3 Q9HD75/216-353 98.4% 34.4% -WNVQGSST-------PGYDDIALGITFMGTFTG-------IPPNAAALEAAQDLIQCAMVKGYLT-------------- 4 Q9VSW0/37-174 98.4% 38.3% -WHIQGQHV-------NGYGAISVSIAFIGTFVN-------MEPPARQIEAAKRLMDEGVRLHRLQ-------------- 5 Q9VXN9/188-324 98.4% 35.2% -WKTVGAHT-------LGYNRISLGISFIGCFMK-------ELPTADALNMCRNLLARGVEDGHIS-------------- 6 Q9GK12/40-178 98.4% 35.7% -WNIKGAHAG------PTWNPISIGISFMGNYMN-------RVPPPRALRAAQNLLACGVALGALR-------------- 7 O75594/42-180 98.4% 36.4% -WNFTGAHSG------HLWNPMSIGISFMGNYMD-------RVPTPQAIRAAQGLLACGVAQGALR-------------- 8 O88593/29-167 98.4% 40.3% -WNIKGDHTG------PIWNPMSIGITFMGNFMD-------RVPAKRALRAALNLLECGVSRGFLR-------------- 9 Q9V3B7/33-170 98.4% 34.4% -WNNMGAHA-------AEWNPYSIGISFLGNYNW-------DTLEPNMISAAQQLLNDAVNRGQLS-------------- 10 Q9V4X2/33-169 98.4% 33.6% -WNVMGAHA-------TNWNSKSIGISFLGNYNT-------NTLTSAQITAAKGLLSDAVSRGQIV-------------- 11 Q9VS97/35-169 97.7% 27.1% -PSQRGAFAG------PN-NDGSLGIAFIGNFEE-------RAPNKEALDAAKELLEQAVKQAQLV-------------- 12 O76537/29-166 98.4% 34.4% -WLHVGAHT-------YGYNRKSIGITFIGNYNN-------DKPTQKSLDALRALLRCGVERGHLT-------------- 13 Q9XTN0/36-173 98.4% 31.2% -WLHVGAHT-------YGYNSRSIGVAFIGNFNT-------DEPSGAMLEALRSLLRCGVERGHLA-------------- 14 O97369/34-170 98.4% 32.0% -WLRSGSHT-------YGYNDKSIGINFIGNYNK-------DVPTDDQLNAVRDLLKCGVEQGHLT-------------- 15 BAB33295/36-17 98.4% 34.4% -WNHIGAHT-------LHYNNISIGIGFIGDFRE-------KLPTQQALQAVQDFLACGVENNLLT-------------- 16 Q9VYX7/49-186 98.4% 27.9% -WGLRGAHT-------YGYNAIGTGIAFIGNFVD-------KLPSDAALQAAKDLLACGVQQGELS-------------- 17 Q9VV97/36-174 98.4% 30.0% -FGLQGSHS-------PNYNRKSIGIVFIGNFER-------SAPSAQMLQNAKDLIELAKQRGYLK-------------- 18 Q9VV96/31-165 97.7% 31.0% -FGIRGEHA-------PRYNSQSIGIAFIGNFQT-------GLPPSQMLQAARTLIQIAVQRRQVS-------------- 19 BAB33294/42-17 97.7% 30.0% -WNVIGIHA-------GPANKLSIGICLIGDWRV-------ETPPAEQLATTKKLLSTGVEMGAIS-------------- 20 Q9VGN3/23-162 98.4% 30.0% -FNVIGAHA-------PKYNDKSVGIVLIGDWRT-------ELPPKQMLDAAKNLIAFGVFKGYID-------------- 21 Q9QXZ2/373-511 98.4% 24.6% -WHWVGAHT-------RGYNSRGFGVAFVGNYTG-------SLPNEAALNTVRDALPSAIRAGLLR-------------- 22 Q9UC60/391-531 98.4% 25.2% -WHWVGAHT-------LGHNSRGFGVAIVGNYTA-------ALPTEAALRTVRDTLPSCAVRAGLLR------------- 23 Q9KZK5/235-396 99.2% 19.6% SKPVLGAHT-------LGFNSNSMGIAVLGTYSS------KKPSSAALKAIARLTAWKVGLYGMNPRGKTYLKSGGGNLY 24 O86334/209-373 99.2% 15.7% TKPVEGFHT-------GGFNRNTWGVAMIGNFDD------VAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSSSYTTF 25 CWHA_ACHLY/12- 84.4% 12.2% AWHAKN--H---------NY-YTIGIEHDGRAA-------DAGNWSAAMVNASARLTK-SICARRGVNCASAW-KGPGYD 26 AMPD_ECOLI/16- 88.3% 9.8% AWHAGVSQYQG----RERCNDFSIGIELEGTD---------TLAYTDAQYQQLAAVTR-ALIDCYPD------------- 27 12720293/22-17 89.1% 9.2% AWHAGVSQFEG----REKCNDFSIGIELEGSN---------TQPFTVAQYQSLITLTK-AIMASYPD------------- 28 AMPD_HAEIN/20- 89.1% 9.2% AWHAGVSNFQG----REKCNDFAIGIELEGSN---------EQPFTDAQYFSLQELTN-VIMKSYPK------------- 29 Q9KPE7/16-167 89.1% 9.2% AWHAGVSSFAG----RAKCNDYSIGIELEGSD---------FVPYTDAQYQALTELTQ-ALMVRYPH------------- 30 Q9ZGA0/18-169 89.1% 10.5% AWHAGVSCFDG----REACNDFSLGIELEGTD---------TEPYTDAQYTALAGLTR-LLRAAFPG------------- 31 Q9KIB6/18-168 89.1% 10.5% AWHAGQSCFEG----RENCNDFSLGIELEGTD---------ELAYSDAQYASLTILTR-LLLKAYPA------------- 32 Q9JN37/17-165 87.5% 9.9% AWHAGVSDFFG----RTRCNDFSIGIEIEGTD---------DQPFTPAQYRATAALVR-AICAAYP-------------- 33 Q9K0E1/22-170 87.5% 10.5% AYHAGVSSFGG----REKCNAFSIGIELEGCD---------FEPFAEAQYRSLEALLD-AICRHYP-------------- 34 Q9I5D1/7-158 86.7% 11.5% AWHAGVSGWAR----RDNLNDTSIGIEIVNLARDDDG-VFTFPDYERSQINALKQLAK-NILQRYPD------------- 35 Q9HT86/24-165 85.2% 10.8% AWHAGVSEWQG----RTWLNATSIGIEIVNQGYRDTPQGRVWYPFSEAQIQALIPLLK-DIAKRH-G------------- 36 YBJR_ECOLI/32- 85.9% 13.2% AWHAGISAWRG----ATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAK-DIIARY-H------------- 37 15695/1-151 89.8% 13.6% GSHA------------KGYNHNSIGVCLVGGIDDKGK---FDANFTPAQMQSLRSLLV-TLLAKYEGSV---LRAHHDVA 38 Q9FZS0/158-310 88.3% 8.3% AWSVGN------------ANSISINLCFAGSRASWMRDQWMKQSAIDVAAYLAVQDAKKYGFTPLVVP------------ 39 AAK24537/8-145 87.5% 13.5% AWHAGAAFWKG----VKDINSASVGIEIVNPGHEFG----YRP-FPEAQIAAVINLLA-DIRSRW--------------- 40 Q9RJZ8/55-186 85.9% 13.9% AWHAGNWDY---------NT-RSIGIEHEGWVD-------RPEYFTNAMYEQSARLTA-AICTAYGI------------- 41 O86582/86-215 85.9% 14.0% AYHAGNRDY---------NE-RSVGIEHAGFVD-------RPQDFTDAMYAASARLTA-GICARYGI------------- 42 Q9S2M7/304-443 85.9% 11.2% AWHAANKTL---------NM-HSIGIEHEGYAI-------KDGWYTEPQYESSAALVK-YLAGKYDI------------- 43 Q9FC03/257-395 85.2% 6.9% AFHAGNYST---------NL-HSIGIEHEGFAA-------HGAWYTESQYQATADLVK-YLAERFGV------------- 44 Q9K4H5/267-407 85.2% 10.4% AWHAGNWYV---------NA-KSIGLEHEGFLA-------EPDWYTEAMYRSSARLVK-YLAKKYDI------------- 45 O86919/542-681 85.2% 8.8% AWGAGPQA----------ND-RFIHVELVH-TH-------DYDSFARSINNYADYAAT-NLQYYGLV------------P 46 AAK17065/372-5 85.2% 9.5% SWGAGPQG----------NE-RFINVEIVH-TH-------DYDSFARSMNNYADYAAT-QLQYYGLK------------P 47 Q9LAA1/291-430 85.2% 7.4% RWGAGPVA----------NE-RYIHMELVH-TH-------DKDSFARQMNNIADYAAT-NLQYYGLK------------P 48 Q9EXF2/105-246 85.2% 8.1% VWGAGQYA----------NA-RFIQVELVR-SK-------TFDEFARSINNYAYYAAY-LLDQYNLP------------V 49 Q9S3T5/94-234 85.2% 8.7% VWGAGPKA----------NP-YFYQIELVR-MY-------NFEDFAKSVNNQAWLAAY-MLKQNGIT----------PTL 50 ALYS_BPA51/12- 86.7% 12.0% SWGAGQYA----------NSYSYAQVELCR-TS-------NATTFKKDYEVYCQLLVD-LAKKAGIP----------ITL 51 Q38658/10-151 85.2% 9.2% SWDVGGGW----------NAETYAAVELIESHS-------TEEEFMEDYRLYIELLRN-LADEADLP----------KTL 52 ALYS_BPR1T/12- 85.2% 10.1% AYGAGSPA----------NERSPFQIELSH-YS-------DPAKQRSSYINYINAVRE-QAKVFGIP----------LTL 53 Q9MCC8/13-153 86.7% 10.7% QWGAGTVA----------NANSPVQIELGH-TS-------DPETFKKDYAVYIELARD-MAARYGIP----------TSL 54 P79668/188-338 91.4% 7.3% GWHTANQI----------GNKYYYGIEVCQSMG-------ADNTFLKNEQATFQECAR-LLKKWGLP--------ANRNT 55 O56788/178-326 90.6% 10.0% AWHCANQW----------GNKNLYGIEICQSMT-------ASDQFLKNEQTAFYEASR-MLKKWGLK--------PDKNT 56 O80122/1-147 89.1% 7.3% AWHCANSY----------GNANYASWEVCQSEG-------DLNQFLKNEQAVLDDVAK-YMKQWSLT--------PNRDT 57 CWLA_BACSU/15- 86.7% 8.3% AWHTGDGTN-------GTGNRKSIGVEICY-SK-------SGGRYKAAEKLAIKFVAQ-LLKERGWG------------I 58 P89924/13-155 86.7% 8.3% AWHAGDGGS-------GRGNRHSIGVEICY-SK-------SGGRYEQAVRNAIIVIRQ-LMDQFNIP------------I 59 Q9ZXD7/13-154 89.1% 14.6% GWHAGDGNR-------GTGNRKSIGIEICE-NS-------DGD-FEKAVANAQWLIKK-LMKEQGIS------------L 60 XLYA_BACSU/11- 88.3% 13.2% GWHAGDGN--------GSGNRASIGIEICE-NA-------DGD-FAKATANAQWLIKT-LMAEHNIS------------L 61 YQEE_BACSU/11- 89.1% 12.5% GWHAGDGTN-------GTGNRKSIGIEICE-NA-------DGD-FEKATSNAQWLIRK-LMKENNIP------------L 62 CWLL_BACLI/14- 93.8% 7.9% AYHAHDKNRCYVSFLKPNANTKSISVEMCV-EK-------DGMIHSETVQNAAELVAD-LCKRYGLS------------- 63 CWLX_BACLI/14- 93.0% 7.2% AYHAHDQNRCYVSFLKPNANTTALGVEMCV-EK-------DGTIHEETIRNAAELVAD-LCKTYGLS------------- 64 Q9ZX49/208-349 86.7% 9.6% AWHAGVGSYPGLP--EDNANAVTIGIEAQNSGTYD--GAPHRTWPDAQYDAYVKCCAA-ICRR--LG------------- 65 O06288/27-172 89.8% 10.2% CWHAGRGSYPWLP--TDNANWHMIGVECAWPTIRRD-GSYDAGRWPDAQIVSMRDVAA-ALTLK-LP------------- 66 Q56204/13-162 90.6% 11.6% EWHCGN-AF---------ANDHYIGIERCQSKING--ILTDEQ-FGENEEASYWIAAL-LLKKYQLP------------- consensus/100% .......................hth.h.................................................... consensus/90% .ath.s.............t...htlth.t................t........h......t................. consensus/80% .Wthts.t...........s.hslGlph.t...............tts..th...htt.hhhthh............... consensus/70% .Wpststt..........hNthulGlphhs.h.........t..htps..sshthltp.hhtthh............... cov pid 161 . . .] 191 1 Q9VSV9/331-468 100.0% 100.0% ----RQQWLAQPPQKEIPD--------LELP 2 Q9HD75/61-208 100.0% 33.6% PLLGKGENCLAPRQKTSLK--------KLAP 3 Q9HD75/216-353 98.4% 34.4% ------PNYLLVGHSDVAR--------TLSP 4 Q9VSW0/37-174 98.4% 38.3% ------PDYHIYAHRQLSP--------TESP 5 Q9VXN9/188-324 98.4% 35.2% ------TDYRLICHCQCNS--------TESP 6 Q9GK12/40-178 98.4% 35.7% ------SNYEVKGHRDVQP--------TLSP 7 O75594/42-180 98.4% 36.4% ------SNYVLKGHRDVQR--------TLSP 8 O88593/29-167 98.4% 40.3% ------SNYEVKGHRDVQS--------TLSP 9 Q9V3B7/33-170 98.4% 34.4% ------SGYILYGHRQVSA--------TECP 10 Q9V4X2/33-169 98.4% 33.6% ------SGYILYGHRQVGS--------TECP 11 Q9VS97/35-169 97.7% 27.1% ------EGYKLLGHRQVSA--------TKSP 12 O76537/29-166 98.4% 34.4% ------ANYHIVGHRQLIS--------TESP 13 Q9XTN0/36-173 98.4% 31.2% ------GDYRAVAHRQLIA--------SESP 14 O97369/34-170 98.4% 32.0% ------QDFHVVGQRQLMA--------TEGP 15 BAB33295/36-17 98.4% 34.4% ------EDYHVVGHQQLIN--------TLSP 16 Q9VYX7/49-186 98.4% 27.9% ------EDYALIAGSQVIS--------TQSP 17 Q9VV97/36-174 98.4% 30.0% ------DNYTLFGHRQTKA--------TSCP 18 Q9VV96/31-165 97.7% 31.0% ------PNYSVVGHCQTKA--------TACP 19 BAB33294/42-17 97.7% 30.0% ------SDYKLIGHNQAMT--------TECP 20 Q9VGN3/23-162 98.4% 30.0% ------PAYKLLGHRQVRD--------TECP 21 Q9QXZ2/373-511 98.4% 24.6% ------PDYKLLGHRQLVL--------THCP 22 Q9UC60/391-531 98.4% 25.2% ------PDYALLGHRQLVR--------TDCP 23 Q9KZK5/235-396 99.2% 19.6% RKGKKVRLNVISGHRDGFA--------TNCP 24 O86334/209-373 99.2% 15.7% PGGAIARLPAIFTHRDVGN--------TDSP 25 CWHA_ACHLY/12- 84.4% 12.2% TFHLVPDSVRVKGHGMLSGNEN-----RYDP 26 AMPD_ECOLI/16- 88.3% 9.8% -----IAKN-MTGHCDIAP--------DRKT 27 12720293/22-17 89.1% 9.2% -----ITLQRIVGHCDVAP--------GRKI 28 AMPD_HAEIN/20- 89.1% 9.2% -----ITKDRIVGHCDISP--------KRKI 29 Q9KPE7/16-167 89.1% 9.2% -----ITLPRITGHQYIAP--------LRKT 30 Q9ZGA0/18-169 89.1% 10.5% -----ITPERIQGHCDIAP--------ERKT 31 Q9KIB6/18-168 89.1% 10.5% -----LDVRRIRGHADIAP--------QRKT 32 Q9JN37/17-165 87.5% 9.9% -------IRAIAGHSDIAP--------GRKT 33 Q9K0E1/22-170 87.5% 10.5% -------VTAVTGHQDIAP--------GRKT 34 Q9I5D1/7-158 86.7% 11.5% -----MTPKNVVGHSDIAV--------GRKS 35 Q9HT86/24-165 85.2% 10.8% -----ITPDRIIGHSDIAP--------GRKV 36 YBJR_ECOLI/32- 85.9% 13.2% -----IKPENVVAHADIAP--------QRKD 37 15695/1-151 89.8% 13.6% KACPSFDLKRWWEKNELLV--------TSDR 38 Q9FZS0/158-310 88.3% 8.3% -PPYTNGRPGISDHRWVTDVFKW--GTHTDV 39 AAK24537/8-145 87.5% 13.5% ----MIPDSRILGHSDVAP--------ARKI 40 Q9RJZ8/55-186 85.9% 13.9% ----PKDRTHIIAHHEVPG--------SDHT 41 O86582/86-215 85.9% 14.0% ----PVDRKHILGHVEVPG--------TDHT 42 Q9S2M7/304-443 85.9% 11.2% ----PLDREHILGHDEVPGVLDG--NKSQHW 43 Q9FC03/257-395 85.2% 6.9% ----PLDRQHVIGHDNVAGPNSA-LVAGMHW 44 Q9K4H5/267-407 85.2% 10.4% ----PLDRQHVLGHDNVPGTTTA-TIPGMHT 45 O86919/542-681 85.2% 8.8% DSAEYDGVGTVWTHQAVSNYLGG--SDHSDP 46 AAK17065/372-5 85.2% 9.5% DSAENDGQGTVWTHYAISRYLGG--TDHTDP 47 Q9LAA1/291-430 85.2% 7.4% DSAEYDGRGTVWTHRAVSNFLGG--TDHVDP 48 Q9EXF2/105-246 85.2% 8.1% DSAHSDGKGTVWSHDAVTRYLGG--TTHTDP 49 Q9S3T5/94-234 85.2% 8.7% -ADDNAGKGSVISHNAVGKYWGG--TDHVDP 50 ALYS_BPA51/12- 86.7% 12.0% DSGSKTSDKGIKSHKWVADKLGG--TTHQDP 51 Q38658/10-151 85.2% 9.2% DTDDLAGIK---THEYCTNNQPNNNSDHVDP 52 ALYS_BPR1T/12- 85.2% 10.1% DGAGNGIK----THKWVSDNLWG---DHQDP 53 Q9MCC8/13-153 86.7% 10.7% DAGGAGTPGIK-SHLWVTQHIWG---DHTDP 54 P79668/188-338 91.4% 7.3% IRLHNEFTSTSCPHRSSVLHTGF--DPVTRG 55 O56788/178-326 90.6% 10.0% VRLHMEYYQTACPHRSMKLHVGK--DPTKTS 56 O80122/1-147 89.1% 7.3% VKLHQELSSTSCPRRSVEVHGGT--LESCRS 57 CWLA_BACSU/15- 86.7% 8.3% DRVRKHWNGKYCPHRILSEG------WIQVK 58 P89924/13-155 86.7% 8.3% DRVKTHRNGKYCPHRMLAEG-----GWFKQQ 59 Q9ZXD7/13-154 89.1% 14.6% ANVVPHWSGKQCPRKLLDRW------SFKAG 60 XLYA_BACSU/11- 88.3% 13.2% ANVVPHWSGKECPRKLLDTW------SFKAG 61 YQEE_BACSU/11- 89.1% 12.5% NRVVPHWSGKECPRKLLDHW------SFLNG 62 CWLL_BACLI/14- 93.8% 7.9% --TNKIVRHYDVTNKICPAPWVSDSSQLTTF 63 CWLX_BACLI/14- 93.0% 7.2% --ADRIVRHYDVTNKGCPTPWVRDAGQLSAF 64 Q9ZX49/208-349 86.7% 9.6% ------VADHVISHKEWAGRK----QGKWDP 65 O06288/27-172 89.8% 10.2% -----YGPERNIGHKEYAGAA----QGKWDP 66 Q56204/13-162 90.6% 11.6% -----VNRETVKLHKMFFDTECPARAWSIHL consensus/100% .............t................. consensus/90% ............s+p.h............t. consensus/80% .........thhsHp.h..........t.ps consensus/70% .......t.tlhsHptlss........ppps