cov    pid   1 [        .         .         .         .         :         .         .         . 80 
 1 Q50247/1-79     100.0% 100.0%     LSRFSASPTSGK-----APLTVSFTDQS--------------TGAPAAWRW----------TF-GDG-------------    
 2 Q50244/1-79     100.0%  53.2%     GASFSSNVTSGT-----APLNVLFTDTS--------------TGSPTTWKW----------NF-GDG-------------    
 3 Q50247_1/1-79   100.0%  64.6%     VAAFSASPSSGK-----APLAVKFTDES--------------TGAPTSRKW----------NF-GDG-------------    
 4 O28874/1-83      98.7%  28.6%     VADFTFSPANPV-----AGEEVVFNASK-----------SVDDGQITDYIW----------NF-GDG-------------    
 5 O28621/1-83      98.7%  26.2%     VVLFEITPEKPV-----AGEPVFFKSL-----------SYDPDGKVVWVKW----------EF-GDG-------------    
 6 Q50245/1-80      98.7%  40.7%     SADFKSNITSGY---IFLSEPVQFTDL---------------SKDATEWKW----------DF-GDG-------------    
 7 P71140/1-86      97.5%  23.9%     KAIFTFSPEDPVTD-----ENVVFNASN----------SIDEDGTIAYYAW----------DF-GDGY------------    
 8 Q58863/1-84      94.9%  26.1%     VADFTYKVIN--------GTTVEFNANL----------SYDEDGYIKYYIW----------DF-GDGT------------    
 9 COLA_CLOPE/1-83  98.7%  27.4%     KAVIKSDSSVIV------EEEINFDGTE----------SKDEDGEIKAYEW----------DF-GDG-------------    
10 O54108/1-79      93.7%  33.3%     TAAFTTAVQG---------LNVTFTDQ-----------STDADGTIASRSW----------SF-GDG-------------    
11 Q58863_1/1-80    93.7%  35.3%     LANFTYEIIN--------ENTVRFEDT-----------SVVAPGKIISWHW----------DF-GDG-------------    
12 Q58863_2/1-85    97.5%  26.4%     VAQFIYYPDKPE-----PNEDVEFVSQ-----------SYDPEGEIAYYIW----------NF-GDG-------------    
13 O27076/1-83      96.2%  29.1%     VADFTYAYCGSTSI-----RTFAFTST-----------SYDPDGDNLTLTW----------NF-GDG-------------    
14 Q50247_5/1-79   100.0%  63.3%     VASFSASPVTGN-----APLNVRFTDRS--------------TGSPASWKW----------YF-GDE-------------    
15 COLA_VIBAL/1-83  98.7%  23.8%     NAVITANSKGKV------GESITFSSEN----------STDPNGKIVSVLW----------DF-GDG-------------    
16 O07351/1-79      93.7%  25.0%     VARFELKVEG---------LSVMSQNT-----------SSDSDGNIVSYLW----------DF-GNG-------------    
17 Q46085/1-83      98.7%  26.2%     YGKINGTYKGTE------KEKIKFSSEG----------SFDPDGKIVSYEW----------DF-GDG-------------    
18 Q50247_6/1-79    98.7%  63.8%     TAAFSASPASGS-----EPLTVSFIDKS--------------TGSPDAWRW----------TF-GDG-------------    
19 Q46085_1/1-84    98.7%  28.2%     VIYMHVPKSGAL------NQKVVFYGKG----------TYDPDGSIAGYQW----------DF-GDG-------------    
20 Q50246/1-78      98.7%  41.8%     AANFSSNLTAGY-----APLSVQFTDFS---------------RNAEGWKW----------DF-GDG-------------    
21 O58659/1-78      92.4%  31.0%     SVDFSWEVDN---------LTVKFEANA-----------SDEDG-ISKYLW----------DF-GDN-------------    
22 O69947/1-83     100.0%  30.1%     IAEVSANKTSGA-----AGLKVAFTATA-----------KDADSPDLTYGW----------DF-GDG-------------    
23 Q50247_8/1-79   100.0%  63.3%     VTSFSASPVTGK-----APLTVSFTDQS--------------KGSPDTWKW----------SF-GDG-------------    
24 Q50244_1/1-79   100.0%  60.8%     VLQYWGSPRSGI-----APLTVTFKDNS--------------SGSPTAWNW----------SF-GDG-------------    
25 F69195/1-80      98.7%  44.4%     AANFTASPTMGV-----APLTVQFTDLS---------------TEATEWYW----------DF-NND-------------    
26 O53132/1-80      98.7%  35.8%     VADFNTNVTEGY-----APLPVLFTDRS---------------QNAASTGW----------DFEGDG-------------    
27 Q60106/1-79      93.7%  33.3%     VANFSVATTGLV---------ATFTDS-----------STDSDGSIASHAW----------TF-GDG-------------    
28 O58659_1/1-82    97.5%  20.2%     IPRIYVKEPVI------ANETVVLDGSL----------SYDPDGSIIAYTW----------KI-GNE-------------    
29 PKD1_HUMAN/1-84  96.2%  21.8%     SVAVGVSDGVLV-----AGRPVTFYPH-----------PLPSPG-GVLYTW----------DF-GDGS------------    
30 O53132_1/1-80    98.7%  34.6%     VADFSVSATGGY-----SPLSVTFTDLS--------------QN-AISRSW----------DVNNDG-------------    
31 O26190/1-74      92.4%  31.2%     RADYTYTIQG---------YNVQFQDKS--------------TGTIQYYKW----------DF-GDQ-------------    
32 PKD1_HUMAN_1/1-  98.7%  19.8%     VTSIKVNGSLGLE----LQQPYLFSAVG--------------RGRPASYLW----------DL-GDG-------------    
33 1655467/1-83     94.9%  23.0%     GGSFVRNRPV--------AFNVRLHDPS-----------HYLRDADISYSW----------DF-GDQS------------    
34 O42181/1-76      96.2%  27.8%     NGTHYNNLTLGV-----PYYFSAFSSAS-----------------NVSYLW----------NF-GHG-------------    
35 Q58863_3/1-81   100.0%  28.4%     YIDITATADKTQVS---VNENVRFDCSP--------------YGNPIFIMW----------CF-GDG-------------    
36 O42181_1/1-84    97.5%  17.4%     VAGIEPSGCVGE------HALVNFRARV------------SGNASSYLYEW----------SF-GDGS------------    
37 O42181_2/1-80    97.5%  30.5%     LTAESSSPTELH-----SATTVRAHLSS---------------GNNITWTF----------SM-GDG-------------    
38 O08852_1/1-81    98.7%  19.5%     GLTVYLSPSVEQ------GAPMVVSASV-------------ESGDNITWTF----------DM-GDG-------------    
39 PKD1_HUMAN_2/1- 100.0%  20.7%     GLVVNASRTVVP-----LNGSVSFSTSL-------------EAGSDVRYSW----------VL-CDR-------------    
40 O08852_2/1-84   100.0%  20.2%     SPGATLVGPHGP---LASGQPADFHITS--------------SLPISSTRW----------NF-GDGS------------    
41 PKD1_HUMAN_3/1-  97.5%  21.6%     DAVQYVALQSGP---CFTNRSAQFEAA------------TSPSPRRVAYHW----------DF-GDGS------------    
42 D1021615/1-94   100.0%  12.8%     NNRPPVAVAGPDKELIFPVESATLDGSS-----------SSDDHGIVFYHW--------EHVR-GPSAV-----------    
43 PKD1_HUMAN_4/1- 100.0%  23.3%     VSGLSIRASEPGGSFVAAGSSVPFWGQL-------------ATGTNVSWCW----------AV-PGG-------------    
44 O42181_3/1-84    96.2%  20.7%     KISVTAEKSH-----FAVGEKIQFQARA-------------EPEFNYTYEW----------DF-GGE-------------    
45 O08852_3/1-83    98.7%  19.0%     ESLILSASPNP----AAVNMSLTLCAEL-------------AGGSGVVYTW----------YL-EEG-------------    
46 Q58863_4/1-71    89.9%  27.0%     SVTVNVSRDEIV-----EGDTVKFNFSV--------------SRNIIFCVW----------SF-GDG-------------    
47 O07351_1/1-77    92.4%  18.1%     LPQASANYIH-------LGRWVTMWST-----------STDSDGRIVDTEW----------TL-PNG-------------    
48 O42181_4/1-88    98.7%  18.0%     VMEVIGALPLPIQN---VHSSISFSAAS--------------SVAPVTMSW----------DF-GDLSS-----------    
49 D1021615_1/1-90  98.7%  17.6%     VAVVSPQLQELT-----LPLTSALIDGSQ---------STDDTE-IVSYHW----------EE-INGPFI----------    
50 PKD1_HUMAN_5/1-  97.5%  18.6%     VLRVEPAACIPT------QPDARLTAYV------------TGNPAHYLFDW----------TF-GDGS------------    
51 Q50244_3/1-80    94.9%  36.9%     VAAFSGISNSRD-----CTIECKFYWQQH---------GFANNMEMELWRW----------N------------------    
52 O42181_5/1-83    98.7%  19.0%     RVDIQTEPSLLL-----AGKTADFEAH------------PLPSPYGIHYEW----------NF-GDG-------------    
53 PKD1_HUMAN_6/1-  93.7%  18.7%     VGNVTLQPER---------QFVQLGDEA-------WLVACAWPPFPYRYTW----------DF-GTEEA-----------    
54 D1021615_2/1-91  96.2%  11.7%     VANAGPNHTITL-----PQNSITLNGNQ-----------SSDDHQIVLYEW----------SL-GPG-------------    
55 NMB_HUMAN/1-125  98.7%  13.5%     SSDETFLKDLPI------MFDVLIHDPS-----------HFLNYSTINYKW----------SF-GDNT------------    
56 O42181_6/1-82    96.2%  17.6%     VQLQISDNPVAV--------NALINMTV-----------LNMEGSNLQYRW---------FVN-GDD-------------    
57 PKD1_HUMAN_8/1-  93.7%  22.0%     SVDMSLAVEQ--------GAPVVVSAAV-------------QTGDNITWTF----------DM-GDG-------------    
58 PM17_BOVIN/1-83  94.9%  23.0%     NKRFLRKQP--------LTFALQLHDPS-----------GYLAGADLSYTW----------DF-GDST------------    
59 QNR_COTJA/1-83   94.9%  18.4%     DSIFIKDSPI--------TFDVKIHDPS-----------YYLNDSAISYKW----------NF-GDGS------------    
60 O28621_1/1-75    91.1%  17.1%     VADFTYTPEEPK-----AGQRITFKAYV-----------EGINYKQIIWVF----------S---NG-------------    
61 O10621/1-87      94.9%  16.5%     ESLVNSQPFVTI-----KVSWSVWSGEQ---GEIAQVYLENKLDSKVINVW----------T------------------    
62 O42181_7/1-80    94.9%  20.2%     SADATEQNY--------FPTDVSVCLQG-----------ELSTGTNVTWSW----------L--IDG-------------    
63 CHIT_NPVOP/1-81  94.9%   8.2%     ENLVERKAGVSV-----PVSWNVWNGGV---------GDMAYVLFNENQVW----------K------------------    
64 Q43919/1-83      94.9%   9.2%     NQLVTVHKDGAPVS----VTWNLWSGDV---------GQTAKVLLDVKEVW-------------SG--------------    
65 CHIA_SERMA/1-83  96.2%   9.3%     NNLVKVKNAADV-----SVSWNLWNGDA---------GTTAKILLNGKEAW-------------SG--------------    
66 P97034/1-73      89.9%  16.0%     DVSISWDLWSGD-----AGTTAKVLLDG-------------------KEVW-------------SG--------------    
67 PKD1_HUMAN_10/1  98.7%  22.6%     GLQVSTVPAVLS-----PNATLALTAGV-----------LVDSAVEVAFLW----------TF-GDGEQALHQFQPPYNE    
68 O42181_8/1-82    98.7%  13.3%     GLTINSSLVNVP-----LNTSVHFEAHM------------DEGD-SVRFSW----------IL-CDH-------------    
69 D1021615_3/1-92  97.5%  12.8%     RARAGGRHVLVL-----PNNSITLDGSR----------STDDQR-IVSYLWIRDGQSPAAGDV-IDG-------------    
70 O42181_9/1-98    94.9%  15.7%     VPDVVPQGSTQT-----LTTSVLIDMAV-----------------PATVRW----------SF-GDGGYEQFEHKPPY-P    
71 P76347/1-81      94.9%  16.5%     QATVTDGNGNPL-----ANEAVTFTLPA-----------------DVSASF----------TL-GQGGS-----------    
72 G3822305/1-81    88.6%  13.3%     ERLVKRKDRV----------EVNVSWSV--------YTGEPG---DTAYV-----------LF-GDR-------------    
73 PKD1_HUMAN_11/1  94.9%  12.9%     VGLVLWASSKVV----APGQLVHFQILL-----------AAGS--AVTFRL----------QV-GGAN------------    
74 P76347_1/1-81    94.9%  17.6%     TATVKDPSNHPV-----AGITVNFTMPQ-----------------DVAANF----------TL-ENNGI-----------    
75 Q43919_1/1-87    97.5%  15.7%     VVSVPASATVE------AGKQVSIKATA-----------SDPNGDALSYQW----------TV-PAG-------------    
76 PKD1_HUMAN_12/1  91.1%  21.4%     GRYFPTNHT------------VQLQAVV-------------RDGTNVSYSW----------TA-WRDRG-----------    
77 O08852_12/1-89  100.0%  15.7%     VGLQVPNCCEPG---MATGTEKNFTARV-------------QRGSRVAYAW----YFSLQKVQ-GDS-------------    
78 O42181_10/1-82   96.2%  18.8%     VLYALPQDTFVNKM---VTMNVLVTPKS----------------NFMDCLW----------IF-GDVS------------    
79 P76347_2/1-93    96.2%  13.5%     TLTATVADTEGNAI---ANTEVTFTLPE-----------------DVKANF----------TL-SDGGK-----------    
80 Q58863_5/1-79    87.3%  16.9%     GTLIGYYPIS---PNSPMARIYGFNLTV-----------YDSNG-NVAWNY----------S------------------    
81 O08852_13/1-79   94.9%  19.3%     RAVPSPEARVLQ------GILVRYSPMV-------------EAGSDVAFRW----------T--IDDK------------    
82 O42181_11/1-83   94.9%  12.6%     GLVVQPHPARRV-----LMESVVSYTA-----------SVLEGS-NPTFKW----------TV--DD-------------    
83 Q58863_6/1-83    91.1%  23.3%     YPQIYASPTIAP-----TYYPINITIVE-----------------PASWTW-----YWHHIYF-GDGGS-----------    
   consensus/100%                    ................................................................................    
   consensus/90%                     ...h..t..............h.h........................h.a..............s..............    
   consensus/80%                     .h.h..t..............h.hps....................hth.W..........sh.sst.............    
   consensus/70%                     ssthphp.s.........s.tlthpst...............st..htatW..........sh.G-s.............    

                      cov    pid  81          .         1         .         .         .         .         :         . 160
 1 Q50247/1-79     100.0% 100.0%     ----------SGSRE----KNPVHTYNES----------GQYTVTLTASNANG---------------------------    
 2 Q50244/1-79     100.0%  53.2%     ----------TSSTQ----KSPTHAYSTA----------GTYTVTLTVTNSAG---------------------------    
 3 Q50247_1/1-79   100.0%  64.6%     ----------TRSTA----ENPTHTYDKA----------GLYTVTLTVSNEKG---------------------------    
 4 O28874/1-83      98.7%  28.6%     ----------KSGRG----VSVTHIYSEP----------GTYEVSLTVFDND----------------------------    
 5 O28621/1-83      98.7%  26.2%     ----------TSWVA----PGINHVYEKS----------GEYQVKITACDDKG---------------------------    
 6 Q50245/1-80      98.7%  40.7%     ----------SSSKK----QNPTHTYSET----------GIYTVRLTVSNSNG---------------------------    
 7 P71140/1-86      97.5%  23.9%     ---------EGTSTT----PTITYKYKNP----------GTYKVKLIVTDNQG---------------------------    
 8 Q58863/1-84      94.9%  26.1%     --------PANTTTN----PIIIHKYKKE----------GVYPVTLTVIDND----------------------------    
 9 COLA_CLOPE/1-83  98.7%  27.4%     ----------EKSNE----AKATHKYNKT----------GEYEVKLTVTDNNG---------------------------    
10 O54108/1-79      93.7%  33.3%     ----------TTSTA----TNPVKTYGSA----------GSYTVKLTVTDDKG---------------------------    
11 Q58863_1/1-80    93.7%  35.3%     ----------STSTE----QNPIHTYSKE----------GAYFVTLTVKSDT----------------------------    
12 Q58863_2/1-85    97.5%  26.4%     ----------TVINTT--DTIVHHKYERP----------GYYTVTLTVFDKY----------------------------    
13 O27076/1-83      96.2%  29.1%     ----------STATG----SNVTHTYARE----------GYYTVSLTAKDSNG---------------------------    
14 Q50247_5/1-79   100.0%  63.3%     ----------TNSTE----RNPVHTYNES----------GLYSVTLTAGGAGG---------------------------    
15 COLA_VIBAL/1-83  98.7%  23.8%     ----------STSTQ----TKPTHQYGSE----------GEYSVSLSVTDSEG---------------------------    
16 O07351/1-79      93.7%  25.0%     ----------QTSTE----AAPTWSYTKA----------GSYSVTLTVTDDKG---------------------------    
17 Q46085/1-83      98.7%  26.2%     ----------NKSNE----ENPEHSYDKV----------GTYTVKLKVTDDKG---------------------------    
18 Q50247_6/1-79    98.7%  63.8%     ----------GSSTE----KNPVYTYNRT----------GQYTVSLTVNNSE----------------------------    
19 Q46085_1/1-84    98.7%  28.2%     ---------SDFSSE----QNPSHVYTKK----------GEYTVTLRVMDSSG---------------------------    
20 Q50246/1-78      98.7%  41.8%     ----------SSSAH----QNQVYTYSRA----------GNYNVTLKVNNKNG---------------------------    
21 O58659/1-78      92.4%  31.0%     ----------ESSLL----VNPTHTYRKG----------GRYNVTLTVWDSY----------------------------    
22 O69947/1-83     100.0%  30.1%     ----------TKGEG----LTPTHKYKKV----------GTYTATFTAKDPEG---------------------------    
23 Q50247_8/1-79   100.0%  63.3%     ----------NDSTE----KNPVHTYNKE----------GNYTVALTTTSQGG---------------------------    
24 Q50244_1/1-79   100.0%  60.8%     ----------AYSNE----KYPKHTYTAP----------GSYTISLTASNAAG---------------------------    
25 F69195/1-80      98.7%  44.4%     ----------TIIDSR--EQNPTYTYTQP----------GTYTVTLTVKGPGG---------------------------    
26 O53132/1-80      98.7%  35.8%     ---------SEEVNY----GTVVYVYTSP----------GTYTASLTATNENG---------------------------    
27 Q60106/1-79      93.7%  33.3%     ----------STSTA----TSPSHTYSAA----------GTYSVAETVTDNAG---------------------------    
28 O58659_1/1-82    97.5%  20.2%     -----------SFVG----DKVSYVFREP----------GTYNVTLTVRDDKG---------------------------    
29 PKD1_HUMAN/1-84  96.2%  21.8%     --------PVLTQSQ----PAANHTYASR----------GTYHVRLEVNNTV----------------------------    
30 O53132_1/1-80    98.7%  34.6%     ---------IEDSNA----SSFVYEYSSA----------GTYTAKLTAINVNG---------------------------    
31 O26190/1-74      92.4%  31.2%     ----------STSTQ----KNPVHAYKP-----------GTYKVTLTVQGYG----------------------------    
32 PKD1_HUMAN_1/1-  98.7%  19.8%     ----------GWLEG----PEVTHAYNST----------GDFTVRVAGWNEV----------------------------    
33 1655467/1-83     94.9%  23.0%     --------GTLISRS----PTVTHTYLQA----------GSFAARLVLQAAI----------------------------    
34 O42181/1-76      96.2%  27.8%     ----------NLLKG----QNILHTFNTP----------GHHNITLTAANRVG---------------------------    
35 Q58863_3/1-81   100.0%  28.4%     ----------TCSFE----KSPTHRYSSS----------GLYYPHVFVIDDNG---------------------------    
36 O42181_1/1-84    97.5%  17.4%     --------PNETHHG---NPGISHTYRGN----------GTHPLSLTITSGV----------------------------    
37 O42181_2/1-80    97.5%  30.5%     ---------KSYTLS---EPTVSHKYAKD----------GRFTVNITAMNAV----------------------------    
38 O08852_1/1-81    98.7%  19.5%     ---------TVFTGP---EATVQHVYLRA----------QNFTVTVEAANPAG---------------------------    
39 PKD1_HUMAN_2/1- 100.0%  20.7%     ---------CTPIPG---GPTISYTFRSV----------GTFNIIVTAENEVG---------------------------    
40 O08852_2/1-84   100.0%  20.2%     ---------PEVDMA---SPAATHFYVLP----------GSYHMTVVLALGAG---------------------------    
41 PKD1_HUMAN_3/1-  97.5%  21.6%     --------PGQDTDE----PRAEHSYLRP----------GDYRVQVNASNLV----------------------------    
42 D1021615/1-94   100.0%  12.8%     --------EMENIDK----AIATVTGLQV----------GTYHFRLTVKDQQG---------------------------    
43 PKD1_HUMAN_4/1- 100.0%  23.3%     ----------SSKRG----PHVTMVFPDA----------GTFSIRLNASNAVS---------------------------    
44 O42181_3/1-84    96.2%  20.7%     ----------EDLVLPHAPANVVKTYNNP----------GCYVVTVAASNNV----------------------------    
45 O08852_3/1-83    98.7%  19.0%     ----------LSWKTS--MPSTTHTFATP----------GLHLVRVTAENQLG---------------------------    
46 Q58863_4/1-71    89.9%  27.0%     ----------TFSFE----KFPEHTYTKS----------GLYYPRVLVVDDSG---------------------------    
47 O07351_1/1-77    92.4%  18.1%     ----------KIKRG----RMFTAIFPSY----------GHHDVQLKVMDDRG---------------------------    
48 O42181_4/1-88    98.7%  18.0%     -------RVNTSGAGG--TTTTSHKYGHP----------GRYLVSLMGWSGN----------------------------    
49 D1021615_1/1-90  98.7%  17.6%     -------EEKTSVDS----PVLRLSNLDP----------GNYSFRLTVTDSDG---------------------------    
50 PKD1_HUMAN_5/1-  97.5%  18.6%     --------SNTTVRG---CPTVTHNFTRS----------GTFPLALVLSSRV----------------------------    
51 Q50244_3/1-80    94.9%  36.9%     ----------QVQPE----KNPVHTYSTA----------GSYTVTLTVTNSAG---------------------------    
52 O42181_5/1-83    98.7%  19.0%     ---------SALLQG----RRVAHTFEKS----------GPFNVCVSVNNTIS---------------------------    
53 PKD1_HUMAN_6/1-  93.7%  18.7%     --------APTRARG----PEVTFIYRDP----------GSYLVTVTASNNI----------------------------    
54 D1021615_2/1-91  96.2%  11.7%     ------------SEG----KHVVMQGVQTPYLHLSAMQEGDYTFQLKVTDSS----------------------------    
55 NMB_HUMAN/1-125  98.7%  13.5%     ---------GLFVST---NHTVNHTYVLN----------GTFSLNLTVKAAAPGPCPPPPPPPRPSKPTPSLGPAGDNPL    
56 O42181_6/1-82    96.2%  17.6%     ----------LQWSK----SWMSHTFTSA----------GQKQVTVKVFNEVS---------------------------    
57 PKD1_HUMAN_8/1-  93.7%  22.0%     ----------TVLSGP--EATVEHVYLRA----------QNCTVTVGAGSPAG---------------------------    
58 PM17_BOVIN/1-83  94.9%  23.0%     --------GTLISRA----LTVTHTYLES----------GPVTAQVVLQAAI----------------------------    
59 QNR_COTJA/1-83   94.9%  18.4%     ---------GLFVES---GATTSHTFSLQ----------GNFTLNLTVQAII----------------------------    
60 O28621_1/1-75    91.1%  17.1%     ----------RMRMG----ATTTMSFGSP----------GEYTVKMAVIDYS----------------------------    
61 O10621/1-87      94.9%  16.5%     ----------GPTQD----RFATFDYNTS----------GRYSMYVKLCNADG---------------------------    
62 O42181_7/1-80    94.9%  20.2%     ----------MSKMQ----KKACVTFPKP----------KTVAVTLNATNDVS---------------------------    
63 CHIT_NPVOP/1-81  94.9%   8.2%     ----------GAAAA----KRATIDVSKS----------GQFNMRVKLCDDDG---------------------------    
64 Q43919/1-83      94.9%   9.2%     ----------PASAA----GTANFKVTKG----------GRYQMQVALCNADG---------------------------    
65 CHIA_SERMA/1-83  96.2%   9.3%     ---------PSTGSS----GTANFKVNKG----------GRYQMQVALCNADG---------------------------    
66 P97034/1-73      89.9%  16.0%     ---------ASTGTS----GTANFKVNKG----------GRYQMQVALCNADG---------------------------    
67 PKD1_HUMAN_10/1  98.7%  22.6%     SFPVPDPSVAQVLVE----HNVTHTYAAP----------GEYLLTVLASNAF----------------------------    
68 O42181_8/1-82    98.7%  13.3%     ---------CTPIFR---NNTMFYTFRSV----------GTFNIIVTAENDVG---------------------------    
69 D1021615_3/1-92  97.5%  12.8%     -----------SDHS----VALQLTNLVE----------GVYTFHLRVTDSQG---------------------------    
70 O42181_9/1-98    94.9%  15.7%     SSLTCPESPYQVLLS----SNVTYIYSQP----------GIYTAVVSVSNRY----------------------------    
71 P76347/1-81      94.9%  16.5%     --------AITDING---KAEVTLSGTKS----------GTYPVTVSVNNYG----------------------------    
72 G3822305/1-81    88.6%  13.3%     ----------QVWVGEAAGKRASVCVSSG----------GKHEMRVKLCNADG---------------------------    
73 PKD1_HUMAN_11/1  94.9%  12.9%     ---------PEVLPG----PRFSHSFPRV----------GDHVVSVRGKNHVS---------------------------    
74 P76347_1/1-81    94.9%  17.6%     --------AITQANG---EAHVTLKGKKA----------GTHTVTATLGNNN----------------------------    
75 Q43919_1/1-87    97.5%  15.7%     ----------LSATG---LDSATLVVTGSNV-----TSDTVYDLTLVVTDGA----------------------------    
76 PKD1_HUMAN_12/1  91.1%  21.4%     --------PALAGSG----KGFSLTVLEA----------GTYHVQLRATNMLG---------------------------    
77 O08852_12/1-89  100.0%  15.7%     ---------LVILSG----RDVTYTPVAA----------GLLEIHVRAFNELG---------------------------    
78 O42181_10/1-82   96.2%  18.8%     ---------APRHTN---NTTVGHEYTHP----------GHYRVQVNCSNLV----------------------------    
79 P76347_2/1-93    96.2%  13.5%     --------VITDAEG---KAKVTLKGTKA----------GAHTVTASMTGGKSEQLV-----------------------    
80 Q58863_5/1-79    87.3%  16.9%     ------------SNE---LTIISKSFPI-----------GNYTAKLVVWDGMG---------------------------    
81 O08852_13/1-79   94.9%  19.3%     --------QSLTFHN----TVFNVIYQSA----------AIFKLSLTASNHVS---------------------------    
82 O42181_11/1-83   94.9%  12.6%     ---------KPFFTYY--NTVLNVIYQHA----------DVYKLTVTAMNHV----------------------------    
83 Q58863_6/1-83    91.1%  23.3%     -------VWIKPKKS---PYTFTHTYTSE----------GVYPIYMKVYTAEN---------------------------    
   consensus/100%                    .......................h...............t.h.....h................................    
   consensus/90%                     ..............t........h.h.t...........G.a.hpl.h.s..............................    
   consensus/80%                     ..............t.....t.shta.ps..........G.aphplts.st.............................    
   consensus/70%                     ..........t..pt....tpssasatps..........Gpaplplsspss.............................    

                      cov    pid 161          .         .      ] 187
 1 Q50247/1-79     100.0% 100.0%     --------------SNALTKSRYIVVS    
 2 Q50244/1-79     100.0%  53.2%     --------------SNTATKTNYVTVT    
 3 Q50247_1/1-79   100.0%  64.6%     --------------SNTLTKSSYIIVS    
 4 O28874/1-83      98.7%  28.6%     ------------ALSDTITKAVNVSEP    
 5 O28621/1-83      98.7%  26.2%     -------------LKNSTTTILRVYEP    
 6 Q50245/1-80      98.7%  40.7%     --------------TDSQISTVNVVLK    
 7 P71140/1-86      97.5%  23.9%     -------------ASSSFTATIKVTSA    
 8 Q58863/1-84      94.9%  26.1%     ------------NLSDSRTKLINIGES    
 9 COLA_CLOPE/1-83  98.7%  27.4%     -------------GINTESKKIKVVED    
10 O54108/1-79      93.7%  33.3%     -------------ATATATRTVTVGSG    
11 Q58863_1/1-80    93.7%  35.3%     ------------NLTDSVTKIVIISPP    
12 Q58863_2/1-85    97.5%  26.4%     ------------NASSSISKQIVVGGI    
13 O27076/1-83      96.2%  29.1%     -------------LISVKKKTVTAGNP    
14 Q50247_5/1-79   100.0%  63.3%     --------------TNSLTKTGFIAVS    
15 COLA_VIBAL/1-83  98.7%  23.8%     -------------LTATATHTVVISAL    
16 O07351/1-79      93.7%  25.0%     -------------DSDTHQQTIKVDTP    
17 Q46085/1-83      98.7%  26.2%     -------------ESSVSTTTAEIKDL    
18 Q50247_6/1-79    98.7%  63.8%     -------------STSSETRSRYIIVS    
19 Q46085_1/1-84    98.7%  28.2%     -------------QMSEKTMKIKITDP    
20 Q50246/1-78      98.7%  41.8%     --------------TDSKLATITVLHS    
21 O58659/1-78      92.4%  31.0%     ------------NLSSSISKEVVVFGS    
22 O69947/1-83     100.0%  30.1%     -------------NTGNASVRIVVGNT    
23 Q50247_8/1-79   100.0%  63.3%     --------------SNRVQISRYISVT    
24 Q50244_1/1-79   100.0%  60.8%     --------------SNTLTKSNYIVVT    
25 F69195/1-80      98.7%  44.4%     --------------ENTLTKENCITVA    
26 O53132/1-80      98.7%  35.8%     --------------TDTKTTTINVMRN    
27 Q60106/1-79      93.7%  33.3%     -------------ATSTKTSSVTVSSS    
28 O58659_1/1-82    97.5%  20.2%     -------------TESSKTMEIKVYLG    
29 PKD1_HUMAN/1-84  96.2%  21.8%     -------------SGAAAQADVRVFEE    
30 O53132_1/1-80    98.7%  34.6%     --------------TDTKTTTIIVDRK    
31 O26190/1-74      92.4%  31.2%     -------------ITDTKTITLEVMLA    
32 PKD1_HUMAN_1/1-  98.7%  19.8%     -------------SRSEAWLNVTVKRR    
33 1655467/1-83     94.9%  23.0%     ------------PLSSCGTSAPPVVDP    
34 O42181/1-76      96.2%  27.8%     --------------KNHTTVPVAVLAS    
35 Q58863_3/1-81   100.0%  28.4%     --------------NIEVGIPPPIGVG    
36 O42181_1/1-84    97.5%  17.4%     -------------SKANFVTQVCVQPV    
37 O42181_2/1-80    97.5%  30.5%     -------------SSGWTIIPVEVFVF    
38 O08852_1/1-81    98.7%  19.5%     --------------HLSQSLHVQVFVL    
39 PKD1_HUMAN_2/1- 100.0%  20.7%     --------------SAQDSIFVYVLQL    
40 O08852_2/1-84   100.0%  20.2%     --------------SALLETEVQVEAT    
41 PKD1_HUMAN_3/1-  97.5%  21.6%     -------------SFFVAQATVTVQVL    
42 D1021615/1-94   100.0%  12.8%     -------------LSSTSTLTVAVKKE    
43 PKD1_HUMAN_4/1- 100.0%  23.3%     -------------WVSATYNLTAEEPI    
44 O42181_3/1-84    96.2%  20.7%     -------------SNTTGSISIEVLTP    
45 O08852_3/1-83    98.7%  19.0%     --------------SVNATVEVAIQVP    
46 Q58863_4/1-71    89.9%  27.0%     -----------------RVMVG-----    
47 O07351_1/1-77    92.4%  18.1%     -----------------AVTTITIKVK    
48 O42181_4/1-88    98.7%  18.0%     -------------NKVSAHGEVVVTLP    
49 D1021615_1/1-90  98.7%  17.6%     -------------ATNSTTAALIVNNA    
50 PKD1_HUMAN_5/1-  97.5%  18.6%     -------------NRAHYFTSICVEPE    
51 Q50244_3/1-80    94.9%  36.9%     --------------SNTATKTNYVTVT    
52 O42181_5/1-83    98.7%  19.0%     -------------STAVCTEMFAYEEI    
53 PKD1_HUMAN_6/1-  93.7%  18.7%     -------------SAANDSALVEVQEP    
54 D1021615_2/1-91  96.2%  11.7%     ------------RQQSTAVVTVIVQPE    
55 NMB_HUMAN/1-125  98.7%  13.5%     ELSRIPDENCQINRYGHFQATITIVEG    
56 O42181_6/1-82    96.2%  17.6%     ------------SEVRSEIVSVQEVIS    
57 PKD1_HUMAN_8/1-  93.7%  22.0%     ----------------HLARSLHVLVF    
58 PM17_BOVIN/1-83  94.9%  23.0%     ------------PLTSCGSSPVPGTTD    
59 QNR_COTJA/1-83   94.9%  18.4%     ------------PVPCKPVTPTPSLPT    
60 O28621_1/1-75    91.1%  17.1%     ------------------YKVVKVVVK    
61 O10621/1-87      94.9%  16.5%     -------------CSASQTVEVVIADT    
62 O42181_7/1-80    94.9%  20.2%     ------------GKVVSREFFVQERIF    
63 CHIT_NPVOP/1-81  94.9%   8.2%     -------------FSVSEPVTVRVADT    
64 Q43919/1-83      94.9%   9.2%     -------------CTLSDKKELMVADT    
65 CHIA_SERMA/1-83  96.2%   9.3%     -------------CTASDATEIVVADT    
66 P97034/1-73      89.9%  16.0%     -------------CTASDVTQIVVADT    
67 PKD1_HUMAN_10/1  98.7%  22.6%     -------------ENLTQQVPVSVRAS    
68 O42181_8/1-82    98.7%  13.3%     --------------AAQASIYLFVQRE    
69 D1021615_3/1-92  97.5%  12.8%     -------------ASDTDTATVEVQPD    
70 O42181_9/1-98    94.9%  15.7%     -------------ENISRSINMSVYSI    
71 P76347/1-81      94.9%  16.5%     -------------VSDTKQVTLIADAG    
72 G3822305/1-81    88.6%  13.3%     -------------CSVSAPVTVKIADT    
73 PKD1_HUMAN_11/1  94.9%  12.9%     ----------------WAQAQVRIVVL    
74 P76347_1/1-81    94.9%  17.6%     -------------TSDSQPVTFVADKA    
75 Q43919_1/1-87    97.5%  15.7%     -------------LDATAVTRLIVKPA    
76 PKD1_HUMAN_12/1  91.1%  21.4%     --------------SAWADCTMDFVEP    
77 O08852_12/1-89  100.0%  15.7%     --------------GVNLTLMVEVQDI    
78 O42181_10/1-82   96.2%  18.8%     -------------SWVSAHAEINVSVL    
79 P76347_2/1-93    96.2%  13.5%     --------VNFIADTLTAQVNLNVTED    
80 Q58863_5/1-79    87.3%  16.9%     ------------GVNSTTVKFSVINRP    
81 O08852_13/1-79   94.9%  19.3%     ----------------NITVNYNVTVE    
82 O42181_11/1-83   94.9%  12.6%     -------------STLTEDFNVTVDRL    
83 Q58863_6/1-83    91.1%  23.3%     ------------------MKTVYVIDN    
   consensus/100%                    ...........................    
   consensus/90%                     ...................h.h.h...    
   consensus/80%                     ...............sp..h.h.l...    
   consensus/70%                     ..............ssstshpl.l...