cov pid 1 [ . . . . : . . . 80 1 Q9KIZ6-2712-28 100.0% 100.0% ----------------------------------------------------LRTWNVFCAAGE---------------- 2 Q9L8C6-2704-28 100.0% 88.6% AQAYIIG--------------------------------------------TLRIWNVFCAAGE---------------- 3 Q091B4-1-257 97.0% 8.4% ------------MAGQASPDS-----EQARHLAQARRELRGALFRGIDLSACEHVLGFGCGRGLELAALAERLGKFQIVG 4 Q2T4P1-1328-15 97.6% 7.0% FPERIPGFSMTRMFIEPQKYP-----NEFALMQARQIEMRQVLFGREHFERISRVLDIGCGMGTDVIQLAKRFAHLRTTG 5 Q6DNE1-1040-13 98.2% 6.2% LPESIPGFSWLKMLTNSNQNP-----THKTALLEAQQELRRLCFSQVDFSSTKKVLDFGCGYGSDLITLAKNHPHLQLNG 6 Q8RJY2-981-125 98.2% 6.5% FQEIVPGFSWIRTVFRPSERP-----EGRERLAVAQRELRRVLFRAVDLSAIKNVMDFGCGHGSDLIILGEQNEHLKLDG 7 Q8RJY3-988-126 98.2% 5.8% LNEKQPGFSWLRVAYGLDPSE-----ERMRLLLHSQRALRNVLLDSVDFSRAKSVWDFGCGYASDIIALGERHSHLKLHG 8 Q08QH0-445-716 98.2% 7.3% LRQKLPGFSWLMSVYGLSERE-----EHTEVLLNGQRGLRSVLFRGVDWSSVRKVLDFGCGYASDLISLGKKHPHLTLHG 9 Q9RFK7-991-126 98.2% 7.3% LRQKLPGFSWLMSVYGLSERE-----EHTEVLLNGQRGLRSVLFRGVDWSSVRKVLDFGCGYASDLISLGKKHPHLTLHG 10 Q70P95-975-124 98.2% 8.0% MRRPVPGFSWLLNVYGMSETP-----EHKDVLLDGQRGLRSVLFGGVRWESVRKVLDFGCGYASDLLSLARRHPHLKLHG 11 Q5MD33-975-124 98.2% 8.0% MRRPVPGFSWLLNVYGLAETP-----GHKDILLDGQRGLRSVLFGGVRWESVRKVLDFGCGYASDLISLARRYPNLSLHG 12 Q08QH1-951-122 97.6% 10.1% LREAVPGFSWI-SLYKAEPENMAGFQKYYDLAVQANREMSQTIFRGLNFPAFSRVLDIGCGHSADLIDLAMKHSHLELHG 13 Q5MD32-948-122 97.6% 9.7% LREVVPGFSWI-SLYRPQPQD-EGYRGYYDMAWEANREMARIIYRGIDFSTRTRVLDIGCGHAADLVDLARAHPHLELHG 14 Q70P94-949-122 97.6% 9.0% LREVIPGFSWI-SLYRPEPQE-QSYRAYYDIALKANQEMARILYRGVDFSTRTRVLDIGCGHAADLVDLARAHPHLELHG 15 Q8GAQ4-77-347 98.2% 9.1% FSEVVPDFSWLEVILNPDQHP-----EQTSLSLQAQAEMKAVLFRGIDFSSIKKVMDIGCGYSHDLIDLATNHVHLQLDG 16 Q6E7J6-66-336 98.2% 8.0% LPEKIPGLSWLEMMLKPEKQQ-----ENIELILKYQEEMKSVLFRGIDFSSIEKVMDIGCGYSEDLIHLAEEHPHLQLDG consensus/100% .....................................................phhshhCuhu................. consensus/90% ...................................................h.plhshhCuhut................ consensus/80% h.p.lPGhShh..hht.p.p......t.hphhhttptthtthlattlchpthp+VhDhGCGhutDlltLupths+LplpG consensus/70% h.p.lPGFSWl..hht.p.p......t.hphhhpuppthppllatulcapshp+VhDhGCGaupDLltLucpasHLpLpG cov pid 81 . 1 . . . . : . 160 1 Q9KIZ6-2712-28 100.0% 100.0% -----------RHTIDELLVRLQISAVYRKV---------------------IKRWMDHLVAIGVLVGDGEHLVSSQPLP 2 Q9L8C6-2704-28 100.0% 88.6% -----------RHTIDELLVRLQISVVYRKV---------------------IKRWMEHLVAIGILVGDGEHFVSSQPLP 3 Q091B4-1-257 97.0% 8.4% HTASSDEAEAAREAVKARSLEGRIGIVTGELGRA-GPEAGFDLAFGLEALGHTLERGQLFAALGSRVKEGGRLVIGDLFL 4 Q2T4P1-1328-15 97.6% 7.0% YTITRAQAELGAGRIAREGLQGRAEIRHGDSAKD-PFPGKYDLVIGIEVICHIQDKHGVFGNIARSLDDDGHVLLMDFVA 5 Q6DNE1-1040-13 98.2% 6.2% YTISSGQAKFAANQVNDYQLQEQIQIFNRDSSKD-EFPDNYNLAFGFEVAHHIKDKSLLFSNISRHLQEEGLLVMADFIA 6 Q8RJY2-981-125 98.2% 6.5% YTISGKQAEVCKQRVRTRGLQNRIRIFQRDSAKD-DFPGMYDLVLGFEVAGLIPDKDALFSNIDRHLTNGGLLIMADFVA 7 Q8RJY3-988-126 98.2% 5.8% HTLSSEQAELGLRKIEARGLGGRVQVLRRDSSKDAPLESAYDVILGFEVATHIKEKRSLFQNLSSHLREGGFMLLADFIA 8 Q08QH0-445-716 98.2% 7.3% YTISAEQAAIDEERVRARGLQDRIRVFARDSAKD-AFPDRYDLIFGFEVVTHIADKVALFSNISRNLQNGGFLLLADFIA 9 Q9RFK7-991-126 98.2% 7.3% YTISAEQAAIDEERVRARGLQDRIRVFARDSAKD-AFPDRYDLIFGFEVVTHIADKVALFSNISRNLQNGGFLLLADFIA 10 Q70P95-975-124 98.2% 8.0% YTISAEQAAVDARRVRERGFEDRIRVFARDSAKD-AFPDRYDVAFGFEVATHIADKDALFSNLARSLNNGGFLLLADFIA 11 Q5MD33-975-124 98.2% 8.0% YTISAEQAAVDAERVRARGLQDRIRVFARDSAKD-AFPDRYDVAFGFEVATHIADKDALFSNLTRSLNNGGFLLLADFIA 12 Q08QH1-951-122 97.6% 10.1% CNISPDQIAVGRQRIRGLGLDERITLHYQDSSRD-PFPSTYDLVLGFQVIHHIRNKADLFANISRSMRNGGYLVMAETLS 13 Q5MD32-948-122 97.6% 9.7% CNISPDQIEVGRQRIRALGLDGRVLLHYQDSSRD-PFPSTYDLVIAYQVIHHIRAKSDLFANISRSLKPGGILVMAETMS 14 Q70P94-949-122 97.6% 9.0% CNISPDQIEVGRQRIRALGLDGRVLLHYQDSSRD-QFPSTYDLVIAYQVIHHIRAKSDLFANISRSMKPGGLLIMAETMS 15 Q8GAQ4-77-347 98.2% 9.1% YNISPEQVKAGEQKIQGLGYSDRIYLYNRDSAKQ-PLPDTYDLIFSCQVIHHIKRKEDVFLNISQHLNDSGFFVAAEIIS 16 Q6E7J6-66-336 98.2% 8.0% YNISPEQVNFGKERIESLGYAQRINIYNRDSAKQ-PFLDEYDLGYSCQVIHHMKNQENVLLNISKHLRNGGLFVAAEIIS consensus/100% ............ttltt..ht.ph.hh.tc......................h.t...hh.sls..ht.tthhl..p.h. consensus/90% ...........tpplpth.ht.pl.lh.tcs.....................h.th.thh.sls..ht.sthhl.up.hs consensus/80% hslSstQhthstpplcthulptRltlh.pDSu+p..h.stYDlhhuhpVhtHItp+.slFsNlupplpsGGhhlhu-hlu consensus/70% hsISscQhthstp+lcshGlptRIplhhpDSu+s.sh.stYDlhhuhpVhpHItcKtslFsNIupplpsGGhllhA-hlu cov pid 161 . . . 2 . . . . 240 1 Q9KIZ6-2712-28 100.0% 100.0% EHDWAAVLEEAATVFADLPVLLEWCKFAGERLADVLTGKTLALEI---LFPGGSFDMAERIYQD-----------SPIAR 2 Q9L8C6-2704-28 100.0% 88.6% EPDLAAVLEEAGRVFADLPVLFEWCKFAGERLADVLTGKTLALEI---LFPGGSFDMAERIYRD-----------SPIAR 3 Q091B4-1-257 97.0% 8.4% ---KTGLSLPHIDRLA-LPSVDELIALLSGNGFLAVDCVDAAQEVANFLYDPALETHLSQLGW--KQEDARAEGARTNAA 4 Q2T4P1-1328-15 97.6% 7.0% NG-RGRISSPEIDID--IGTRQDWIDVAAAHGLVVDEVIDVSPQIANFLHDPEHERNIAALPG------VAQASFRNFAN 5 Q6DNE1-1040-13 98.2% 6.2% NS-DVDIDHEETSSY--FITKQHWVEQLSPNKLQLISAIDISHEVSNYLYDAEFEENLRELYEQ-NHDDNVKSAFQSYNQ 6 Q8RJY2-981-125 98.2% 6.5% NT-LSPIEVQETSTF--SSTREQWNKLFSSNHLRLVDAVDVSNEVANCLHNPDYAAQFEALCKELKLDEVTQRSFGSYEN 7 Q8RJY3-988-126 98.2% 5.8% NS-GSGVDVQDIASY--NVTPSQWVELLSEHGLRLVECVDVSQEVANFLFDADFDANLTQLETSVGISAIEKRNYQAMRN 8 Q08QH0-445-716 98.2% 7.3% NS-VSAINVQETASY--NVNAEEWAELLARHNLRVVESVDISLEASHFLEDPGFDGHLDTVSKRFGLTELVRRNFDAMRN 9 Q9RFK7-991-126 98.2% 7.3% NS-VSAINVQETASY--NVNAEEWAELLARHNLRVVESVDISLEASHFLEDPGFDGHLDTVSKRFGLTELVRRNFDAMRN 10 Q70P95-975-124 98.2% 8.0% AG-VSAINIEETASY--NSSAEEWADVLSRHNFRLVEGVDISREASLFLEDPSFDQNLERVTERFKLNELVRRNFDAMRN 11 Q5MD33-975-124 98.2% 8.0% TG-VSAINIEETASY--NSSAEEWADVLSRHNFRLVEGVDISREASLFLEDPSFDQNLELVSQRFQLSDLVRRNFDAMRN 12 Q08QH1-951-122 97.6% 10.1% NM-VTPIEHPESTTL--FVPQAEWVELLARNQLRVVQAVEATQEIANFLYDPQFNENFERVTR--DSDDVTKKHLHGIHM 13 Q5MD32-948-122 97.6% 9.7% NM-ASPIEHPESTTH--FIPLGEWAELLARNQLRVVECVDATQEIANFLHDADFEKNFERVTR--DSDDVTRKHLHGIHM 14 Q70P94-949-122 97.6% 9.0% NM-VSPIEHPESTTQ--FVPVGEWAELLARNHLRVVECVDATQEIANFLHDAEFPKNFERVTR--DSDAVTREHLHGIHM 15 Q8GAQ4-77-347 98.2% 9.1% NLPLTPIDDAKSTAY--YVTRSKWAQLLARNNLKVVEGVDASLGIANYLYDPNFTDNLARLCQ--GYDENAKDHFVGPHE 16 Q6E7J6-66-336 98.2% 8.0% NLPLTPIEDTKSTAY--FATRSKWAELLAKNNLRVVEGVDASWEMGNFLEDPKFEENFTRLTQ--DYDETTKEHLKGPDE consensus/100% ....s.l...t.t......s..ph.t.hu.p.h.h.pshphs.th...L.sst..t.ht.l...............s.t. consensus/90% t..hssl...t.s......s..pWhphhutp.h.llpshshs.ph...L.sst..t.httl.t............ts.t. consensus/80% s..hsslp..csssh...sshtcWsclhuppthcllpslDho.Ehu.aL.Dstattphppl.p..t.pt.hppthpshtt consensus/70% s..hosIp..csssa...sshtcWsclLucpthclV-sVDho.EhupaL.Dstappphpplsp..t.sthspcphpuhpp cov pid 241 : . . .] 281 1 Q9KIZ6-2712-28 100.0% 100.0% YSNGIVRGVVESAARVVAPSGTFSILEIGAGTGATTAAVLP 2 Q9L8C6-2704-28 100.0% 88.6% YSNGIVRGVVESAARVVAPSGMFSILEIGAGTGATTAAVLP 3 Q091B4-1-257 97.0% 8.4% IGGLLRGGAAAYLLLIAEKQRELDPQQLEALNRERLLAAKR 4 Q2T4P1-1328-15 97.6% 7.0% TCVSLEKGWVSYCLLRLSKASRLSEAERRRLNAERFGASVA 5 Q6DNE1-1040-13 98.2% 6.2% LGKLLSKGLASYVLLTAKKQENLPQEQSYQLNREMLAQLSS 6 Q8RJY2-981-125 98.2% 6.5% VYKALRGGLISYVLFHVQKDRFSRSDELFHLNAKQFEQLTP 7 Q8RJY3-988-126 98.2% 5.8% FGAALERKILSYVLFIAQKDSHVRSTYLRHINQKWVEAPAP 8 Q08QH0-445-716 98.2% 7.3% FGKALEKGLMSYALIIIQKDDFANRPYLKRANRAKLGALTP 9 Q9RFK7-991-126 98.2% 7.3% FGKALEKGLMSYALIIIQKDDFANRPYLKRANRAKLGALTP 10 Q70P95-975-124 98.2% 8.0% FGKALEKGLMSYALLIIQKDEYASPSYLARVNQAKLGALTP 11 Q5MD33-975-124 98.2% 8.0% FGQALDKGLMSYALLVAQKDEYASPSYLARVNRAKLGALTP 12 Q08QH1-951-122 97.6% 10.1% LGELLQRRLAAYLLFTVTKDESMDVDTLRRINAERLSVRLP 13 Q5MD32-948-122 97.6% 9.7% LGELLSRRLAAYGLFMVTKDESRDVETLRRINRERLSNQLP 14 Q70P94-949-122 97.6% 9.0% LGELLSRRLAAYGLFMVTKDDSRDVETLRRINRTQLNKQLP 15 Q8GAQ4-77-347 98.2% 9.1% LGELLRKKLAVYLLITVQKDSFTEKETILRLNQEKLQNLTP 16 Q6E7J6-66-336 98.2% 8.0% LGQLFNKKLTVYMLITVQKDNLIDKETILRLNQQKLSNLVP consensus/100% h...h.tthh..hhhhht.tt........thstt.h..... consensus/90% hsthl.tthh..hhhhht.pt.hp...hhthstt.htt.hs consensus/80% huphLp+tlhsYhLhhhpKsp.hs...lhphNttphts.hP consensus/70% hGphLp+tlhuYsLhhlpKsp.hs.t.lt+lNttplsshhP