cov pid 1 [ . . . . : . . . 80 1 DP3B_ECOLI/1-3 100.0% 100.0% VSGPLGG-RPTLPILGNLLLQVAD--GTLSLTGTDLEMEMVARVALVQP-------HEPGATTVPARKFFDICRGLPEGA 2 DP3B_HAEIN/1-3 100.0% 61.8% VCGVLSN-RPNIPVLNNVLLQIED--YRLTITGTDLEVELSSQTQLSSS-------SENGTFTIPAKKFLDICRTLSDDS 3 DP3B_PSEPU/1-3 100.0% 54.2% VAGVVER-RQTLPVLSNVLLVVQG--QQLSLTGTDLEVELVGRVQLEEP-------AEPGEITVPARKLMDICKSLPNDA 4 DP3B_BACSU/1-3 99.7% 24.6% VLKAVSS-RTTIPILTGIKIVASD--DGVSFTGSDSDISIESFIPKEEGDKEIVTIEQPGSIVLQARFFSEIVKKLPM-A 5 DP3B_STAAU/1-3 99.7% 24.2% TLKAISP-RTTLPILTGIKIDAKE--HEVILTGSDSEISIEITIPKTVDGEDIVNISETGSVVLPGRFFVDIIKKLPG-K 6 DP3B_CAUCR/1-3 99.7% 36.3% VQSVVER-RNTIPILSNILLSAEG--DRLSFSATDLDMEIIDEGFAQID--------VPGQITAPAHTLYEIVRKLPDGA 7 DP3B_SYNP7/1-3 99.7% 25.4% VSRAVPS-RPNHPVLANVLLAADAGTQRLSLTAFDLSLGIQTSFAAQVE--------RSGAITLPAKLLNDIVSRLPNDS 8 DP3B_BUCAP/1-3 100.0% 41.6% ITRVLVK-NISFPILENILIQVED--GTLSLTTTNLEIELISKIEIITK-------YIPGKTTISGRKILNICRTLSEKS 9 DP3B_MYCSM/1-3 98.6% 26.5% VARSLPT-RPTIPVLAGVLLTGTD--EGLTISGFDYEVSAEVKVSAEIA--------SAGSVLVSGRLLSDITKALPA-K 10 DP3B_MYCLE/1-3 98.6% 24.8% VAKYLPT-RPTVPVLSGVLLTGSD--SGLTISGFDYEVSAEVQVAAEIA--------SSGSVLVSGRLLSDITRALPN-K 11 DP3B_STRCO/1-3 98.6% 24.6% AARSLPA-RPPAPVLAGLLLKAEE--GQLSLSSFDYEVSARVSVEAEIE--------EEGTVLVSGRLLADISRALPN-R 12 DP3B_BORBU/1-3 98.6% 18.9% AKGIILN-RNMNDIWSALLIEVKK--SNLIIKSTDRNIFFESTISIVSE--------TDFKVLINASNFYDAVKAFNFYK 13 DP3B_MYCCA/1-3 99.4% 17.7% AAKVIDY-KNVNPSLSGIYLNVLN--DQVNVITTSGILSFKSILNNQNSD---LEVKQEGKVLLKPKYVLEMLRRLDD-E 14 DP3B_SPICI/1-3 96.8% 20.4% VSRIISQ-KTLIPSLLGILIEVKK--DKITFTTSDGDTSIKSEIMGNDL-----NITRIGSVLIKNKFIVEVIRKIED-E 15 AA82686|BAA826 99.7% 25.6% VSKAVSS-RTTIPILTGIKIVADH--EGVTLTGSDSDISIETFIPLEEGDRQNVEVKQEGSIVLQAKVFAEIVKKLPE-Q 16 DP3B_SYNY3/1-3 99.4% 24.8% VSRAVSS-RPTHPVLGNVLLEADADKNYLRLTAFDLSLGIQSSFTADVQ--------QSGRITLPAKLLNDIVSRLPD-G 17 DP3B_STRPN/1-3 98.8% 20.6% TKRAISS-KNAIPILSTVKIDVTN--EGVTLIGSNGQISIENFISQKNED-AGLLITSLGSILLEASFFINVVSSLPD-- 18 DP3B_TREPA/1-3 99.1% 22.7% AQEVISN-KKNTSIFSNVLLAAQG--ALLTIRATDTKVTFETSIPVNVL--------AEGTTTVFCDKLVNVVSALPT-K 19 DP3B_LACLA/1-3 99.1% 21.9% TKQAIGS-KVTIPALTKLKIEVEE--KGITLIGSNGQISIKNFLPADNKD-ASMLISGTGSVLLEAAFFENVVSQLPE-- 20 B3|Q9ZDB3/1-37 99.4% 27.3% ARSIIEK-RNVIPEYANIKLSAQD--GNLELSSTNMDLYLSQKIAVQVL--------NEGEITVATQTLSDIVRKFPD-S 21 AD35350|AAD353 99.4% 25.9% ASKALAK-KSVKPILAGFLFEVKD--GNFYICATDLETGVKATVNAAEI-------SGEARFVVPGDVIQKMVKVLPD-E 22 DP3B_AQUAE/1-3 97.4% 26.1% ARESTEK-KAALPILANFLLSAKE--ENLIVRATDLENYLVVSVKGEVE--------EEGEVCVHSQKLYDIVKNLNS-A 23 K0|Q9Z8K0/1-35 98.0% 27.4% IQSVVPQ-NTPIPVLTHVLIETYN--DELVFTATDLTVSTRCVTKAKVY--------EKGAISIPSKRFFQLVKELTE-A 24 DP3B_MYCPN/1-3 98.8% 15.1% LNNVIVSNNKMKPYHSYLLIEATE--KEINFYANNEYFSAKCTLAENID------VLEEGEVIVKGKIFSELINGIKE-D 25 X4|Q9ZLX4/1-36 96.2% 19.4% LQAFLDK-KDASSIASHIHLEVIK--EKLFLKASDSDIGLKSYISTQSTD-------KEGVGTINGKKFLDIISCLKD-S 26 DP3B_MYCGE 98.3% 15.3% MNNVIISNNKIKPHHSYFLIEAKE--KEINFYANNEYFSVKCNLNKNID------ILEQGSLIVKGKIFNDLINGIKE-E consensus/100% h.t.h...p...s.h..hhh.h.t....h.h.s.s....h...h...............h.h.h.st.h.ph.p.h.... consensus/90% htt.l.t.p...s.hsthhl.s.t..ttl.h.s.s..h.h.s.h.............t.Gthhl.sphh.phhptl.t.t consensus/80% stpsl.p.+sshPhhsslhlpspp..ttl.hpuss.phthps.l.hp..........p.Gphhl.uchh.clhptLsp.t consensus/70% sppslsp.+sshPlLsslhlpspp..ptlslpuoDhplphpsplthp.t........ptGplhl.u+hh.-llptLsp.t cov pid 81 . 1 . . . . : . 160 1 DP3B_ECOLI/1-3 100.0% 100.0% EIAVQLEG-------ERMLVR-SGR-------SRFSLSTLPAADFP--NLDDWQSEVEF------TLPQATMKRLIEATQ 2 DP3B_HAEIN/1-3 100.0% 61.8% EITVTFEQ-------DRALVQ-SGR-------SRFTLATQPAEEYP--NLTDWQSEVDF------ELPQNTLRRLIEATQ 3 DP3B_PSEPU/1-3 100.0% 54.2% LIDIKVDE-------QKLLVK-AGR-------SRFTLSTLPANDFP--TVEEGPGSLTC------NLEQSKLRRLIERTS 4 DP3B_BACSU/1-3 99.7% 24.6% TVEIEVQN-------QYLTIIRSGK-------AEFNLNGLDADEYP--HLPQIEEHHAI------QIPTDLLKNLIRQTV 5 DP3B_STAAU/1-3 99.7% 24.2% DVKLSTNE-------QFQTLITSGH-------SEFNLSGLDPDQYP--LLPQVSRDDAI------QLSVKVLKNVIAQTN 6 DP3B_CAUCR/1-3 99.7% 36.3% DVSLSFSG------DDPRLVIQAGR-------SRFNLPVLPAGDFP--VMSSDGLSSRI------AVDTNELIRLIDKTR 7 DP3B_SYNP7/1-3 99.7% 25.4% DVTLEDND-------AAATLS-VGS-------GQYQMRGISADEFP--ELPLVQSQEAL------QLSASALIEGLRGTL 8 DP3B_BUCAP/1-3 100.0% 41.6% KIKMQLKN-------KKMYIS-SEN-------SNYILSTLSADTFP--NHQNFDYISKF------DISSNILKEMIEKTE 9 DP3B_MYCSM/1-3 98.6% 26.5% PVEVSVEG-------TRVSLT-CGS-------ARFSLPTLAVEDYP--ALPALP-EETG------VIASDLFAEAIGQVA 10 DP3B_MYCLE/1-3 98.6% 24.8% PVHFYVDG-------NRVALT-CGS-------ARFSLPTMAVEDYP--TLPTLP-DETG------TLPSDVFAEAIGQVA 11 DP3B_STRCO/1-3 98.6% 24.6% PVEISTDG-------VRATVV-CGS-------SRFTLHTLPVEEYP--ALPQMP-EATG------TVPGEVFASAVQQVA 12 DP3B_BORBU/1-3 98.6% 18.9% KIKIVFNEN-----NSKLEIMGELNDEKEEYEDHLKEPTFSYEEIENYNYDMVNEDYTFG----IEIKQKSFKKVINRIA 13 DP3B_MYCCA/1-3 99.4% 17.7% FVVFSMVE-------DNELIIKTNN-------SDFSIGVLNSEDYP--LIGFREKGIEF------NLNPKEVKKTIYQVF 14 DP3B_SPICI/1-3 96.8% 20.4% FITLEVVE------GNLIKIK-ANN-------FDSVLNTLNSADYP--HLSFETEGKEI------IFTSTVLKEIISQTS 15 AA82686|BAA826 99.7% 25.6% EIEIHVQD-------SFVTTIRSGS-------SVFNLNGLDPDEYP--RLPVLEEDHVF------RLPQKILKDIIRQTV 16 DP3B_SYNY3/1-3 99.4% 24.8% DITLAIDPDGDAGDSHLTTIT-SES-------GRFQIRGLDADDFP--ALPTVEGVKPL------LLPVATLNEGLRGAL 17 DP3B_STRPN/1-3 98.8% 20.6% -VTLDFKEI-----EQNQIVLTSGK-------SEITLKGKDSEQYP--RIQEISASTPL------ILETKLLKKIINETA 18 DP3B_TREPA/1-3 99.1% 22.7% EIELTLCE-------EQLVITPPNK------KISFQLRTLSHESFP--CFPQNEGGVSL------AVPTSDLRNMINHTV 19 DP3B_LACLA/1-3 99.1% 21.9% -VTLEFIEKE----QKQVLLT-SGK-------SEITLKGLDSEIYP--HLQEISEGSSL------KMKVKVLKEIFTETV 20 B3|Q9ZDB3/1-37 99.4% 27.3% ELTLTEIE------ITQLEIK-GQN-------CKFNLFTLPVSSFP--AMDSIKPEVSF------KISCADFAKIIESTK 21 AD35350|AAD353 99.4% 25.9% ITELSLEG-------DALVIS-SGS-------TVFRITTMPADEFP--EITPAESGITF------EVDTSLLEEMVEKVI 22 DP3B_AQUAE/1-3 97.4% 26.1% YVYLHTEG-------EKLVIT-GGK-------STYKLPTAPAEDFP--EFPEIVEGG-------ETLSGNLLVNGIEKVE 23 K0|Q9Z8K0/1-35 98.0% 27.4% NLEISSSA------GEMAQIT-SGS-------SCFRLLSMEKEDFP--MLPDIQNALRF------SLPAEQLKTMLQRTS 24 DP3B_MYCPN/1-3 98.8% 15.1% IITIQEKD-------QTLLVK-TKK-------TNINLNTIDKKEFP--RIRFNQ-NVDLKEFDELKIQHSLLTKGLKKIA 25 X4|Q9ZLX4/1-36 96.2% 19.4% NIVLETKD-------DSLVIK-QNK-------SSFKLPMFDADEFP--EFPVIDPKVSL------EINAPFLVDAFKKIA 26 DP3B_MYCGE 98.3% 15.3% IITIQEKD-------QTLLVK-TKK-------TSINLNTINVNEFPRIRFNEKNDLSEFN---QFKINYSLLVKGIKKIF consensus/100% .h.h...............h....p.................t.h....h................h....h.phh.th. consensus/90% .l.ht..t.......p...l..stp.......sphpl.shs.tpaP...h........h.......l..t.hhphltth. consensus/80% .lplphpt.......p.hhlh.stp.......sphpL.shssppaP..ths.ht.t.th......tlstp.htphlpps. consensus/70% .lplphpt.......pthhlh.ssp.......upapL.shss--aP..ths.hp.t.ph......plssphLtchlpps. cov pid 161 . . . 2 . . . . 240 1 DP3B_ECOLI/1-3 100.0% 100.0% FSMAH-QDVRYYLNGMLFETEGE----ELRTVATDGHRLA---VCSMPIGQSLP------------SHSVIVPRKGVIEL 2 DP3B_HAEIN/1-3 100.0% 61.8% FSMAN-QDARYFLNGMKFETEGN----LLRTVATDGHRLA---VCTISLEQELQ------------NHSVILPRKGVLEL 3 DP3B_PSEPU/1-3 100.0% 54.2% FAMAQ-QDVRYYLNGMLLEVSRN----TLRAVSTDGHRLA---LCSMSAPIEQED-----------RHQVIVPRKGILEL 4 DP3B_BACSU/1-3 99.7% 24.6% FAVST-SETRPILTGVNWKVEQS----ELLCTATDSHRLA---LRKAKLDIPEDR-----------SYNVVIPGKSLTEL 5 DP3B_STAAU/1-3 99.7% 24.2% FAVST-SETRPVLTGVNWLIQEN----ELICTATDSHRLA---VRKLQLEDVSE------------NKNVIIPGKALAEL 6 DP3B_CAUCR/1-3 99.7% 36.3% FAIST-EETRYYLNGLYVHTVNEGGETKLRAVATDGHRLA---LAEMPAPEGAVG-----------IPGVIVPRKTIAEA 7 DP3B_SYNP7/1-3 99.7% 25.4% FATSG-DETKQILTGVHLKVQPD----GLEFAATDGHRLA---VVKTENAAATPA----------TEFAVTVPSRALRDL 8 DP3B_BUCAP/1-3 100.0% 41.6% FSMGK-QDVRYYLNGMLLEKKDK----FLRSVATDGYRLA---ISYTQLKKDIN------------FFSIIIPNKAVMEL 9 DP3B_MYCSM/1-3 98.6% 26.5% VAAGR-DDTLPMLTGIRVEISGE----SVVLAATDRFRLA---VRELTWVTTAGD----------VEAAVLVPAKTLAEA 10 DP3B_MYCLE/1-3 98.6% 24.8% IAAGR-DYTLPMLTGIRIEISGD----TVVLAATDRFRLA---VRELKWSVLSSD----------FEASVLVPAKTLVEV 11 DP3B_STRCO/1-3 98.6% 24.6% IAAGR-DDTLPVLTGVRIEIEGD----SVTLASTDRYRFA---VREFLWKPENPD----------ISAVALVPAKTLQDT 12 DP3B_BORBU/1-3 98.6% 18.9% FSAHL-DESKNVLNGVYFSKDEDS---KLLLVSTNGHRMS---ICKTEVIVEED-------------VNFIVPVKIFNFL 13 DP3B_MYCCA/1-3 99.4% 17.7% VSMNE-NNKKLILTGLNLKLNNN----QAIFSTTDSFRIS---QKILEIQSDNNE-----------DIDITIPFKTALEL 14 DP3B_SPICI/1-3 96.8% 20.4% FAIGE-KEKRIVFNGLNIKTDQNN--KELIITATDSFRLS---CKKIDYSNNYN-------------FDVIIPGKFINEI 15 AA82686|BAA826 99.7% 25.6% FAVST-QETRPVLTGVNFEIEDG----ILTCTATDSHRLA---MRKVPVEKNDDE---------LQFSNVVIPGKSLNEL 16 DP3B_SYNY3/1-3 99.4% 24.8% FAAST-DETKQVLTGVHIKGSGD----SLEFAATDGHRLA---VVEAPTQIENDEGEAVITGSDLADFAVTIPARALREL 17 DP3B_STRPN/1-3 98.8% 20.6% FAAST-QESRPILTGVHFVLSQHK---ELKTVATDSHRLS---QKKLTLEKNSDD------------FDVVIPSRSLREF 18 DP3B_TREPA/1-3 99.1% 22.7% FAVSE-DSTRHFINGVHVDFQYG----NIICVSTDGKRLA---YIEKKGESSPQS-----------FSGVIVPTKILGIV 19 DP3B_LACLA/1-3 99.1% 21.9% FAVST-QENRPIFTGVHLETLSTG---ELKAVATDSHRMS---QRLLPLEDTDL------------KFDVILPSKSINSF 20 B3|Q9ZDB3/1-37 99.4% 27.3% FSISL-DETRYNLNGIYLHIKDK----EFFAASTDGYRLS---ISWITLEEKIK------------NFGVILPQKSAEEI 21 AD35350|AAD353 99.4% 25.9% FAAAK-DEFMRNLNGVFWELHKN----LLRLVASDGFRLA---LAEEQIENEEE-------------ASFLLSLKSMKEV 22 DP3B_AQUAE/1-3 97.4% 26.1% YAIAK-EEANIALQGMYLRGYED----RIHFVGSDGHRLA---LYEPLGE---------------FSKELLIPRKSLKVL 23 K0|Q9Z8K0/1-35 98.0% 27.4% FAVSR-EESRYVLTGVLLAIANG----VATIVGTDGKRLA-----KIDAEVTLDK---------SFSGEYIIPIKAVEEI 24 DP3B_MYCPN/1-3 98.8% 15.1% HAVSTFRESTRKFNGVNFNGSNGK---QIFLEASDSYKLS---VYEIK-QKTDP-------------FNFIVETNLLSFI 25 X4|Q9ZLX4/1-36 96.2% 19.4% PVIEQ-TSHKRELAGVLMQFNQKH--QTLSVVGTDTKRLSYTQLEKISIHSTEED------------ISCILPKRALLEI 26 DP3B_MYCGE 98.3% 15.3% HSVSNNREISSKFNGVNFNGSNGK---EIFLEASDTYKLS---VFEIKQETEP--------------FDFILESNLLSFI consensus/100% .sht..p.....htGh.h.h..t.....h...sosth+hu.............................hhl..p.h..h consensus/90% huhst.pp.h..hsGh.hth.tt.....h.hsuoDthRhu......h.....................thhls.+.h..h consensus/80% auhup.p-sp.hLsGl.hphptp....tlhhsuTDuaRLu...hhph.ht.t...............hshllPt+sl.pl consensus/70% auhup.p-s+.hLsGlhhchpts....plhhsuTDuaRLu...ltchphp.p...............hslllPtKslt-l cov pid 241 : . . . . 3 . . 320 1 DP3B_ECOLI/1-3 100.0% 100.0% MRMLDG---GDNPLRVQIG-------SNNIRAHVGD--FIFTSKLVDGRFPDYRRVLP--KNPDKHLEAGCDLLKQAFAR 2 DP3B_HAEIN/1-3 100.0% 61.8% VRLLET---NDEPARLQIG-------TNNLRVHLKN--TVFTSKLIDGRFPDYRRVLP--RNATKIVEGNWEMLKQAFAR 3 DP3B_PSEPU/1-3 100.0% 54.2% ARLLTD---PEGMVSIVLG-------QHHIRATTGE--FTFTSKLVDGKFPDYERVLP--KGGDKLVVGDRQALREAFSR 4 DP3B_BACSU/1-3 99.7% 24.6% SKILDD---NQELVDIVIT-------ETQVLFKAKN--VLFFSRLLDGNYPDTTSLIP--QDSKTEIIVNTKEFLQAIDR 5 DP3B_STAAU/1-3 99.7% 24.2% NKIMSD---NEEDIDIFFA-------SNQVLFKVGN--VNFISRLLEGHYPDTTRLFP--ENYEIKLSIDNGEFYHAIDR 6 DP3B_CAUCR/1-3 99.7% 36.3% RRLMES---AGETVDLQVS-------PQKVRFEFGA--AALTSKVIDGAFPDYMRVIP--RDNAKILTLDNDLFAKAVDR 7 DP3B_SYNP7/1-3 99.7% 25.4% ERMIAIR-GSDEAIALYHD-------QGQTVFQWGD--QYLTSRTLDGQYPNYGQLIP--REFNRNVAVDRKRLLAALER 8 DP3B_BUCAP/1-3 100.0% 41.6% LKLLNT---QPQLLNILIG-------SNSIRIYTKN--LIFTTQLIEGEYPDYKSVLF--KEKKNPIITNSILLKKSLLR 9 DP3B_MYCSM/1-3 98.6% 26.5% AKAGTD----GNQVHLALGSGASVGKDGLLGIRSEG--KRSTTRLLDAEFPKFRQLLP--AEHTAVATIGVAELTEAIKR 10 DP3B_MYCLE/1-3 98.6% 24.8% AKAGTD----GSGVCLSLGAGVGVGKDGLFGISGGG--KRSTTRLLDAEFPKFRQLLP--AEHTAVATIDVAELTEAIKL 11 DP3B_STRCO/1-3 98.6% 24.6% AKALTS----GDQVILALSGS--GAGEGLIGFEGAG--RRTTTRLLEGDLPKYKTLFP--TEFNSVAVIETAPFVEAVKR 12 DP3B_BORBU/1-3 98.6% 18.9% KHLMSG----EGMVKIKFS-------DKKFYVEFDN--YKIACSLINGNYPDYKSIIP--KEQKNKSLVSLGILKDRLAR 13 DP3B_MYCCA/1-3 99.4% 17.7% PKLLDN----AENLKIIIV-------EGYITFIIDN--VIFQSNLIDGKFPNVQIAFP--TKFETIITVKQKSILKVLSR 14 DP3B_SPICI/1-3 96.8% 20.4% GRLISE--------NDQVS-----------ELLLII--INCKQKIIEGKYPDTSKVIR--TSFNTSLTINNRAIIKIIER 15 AA82686|BAA826 99.7% 25.6% SKILDE---NEELLDIVVT-------ENQTLFKLKN--MLFFSRLLEGKYPVTKNMIP--KEAKTSFAVHTKAFLQTLER 16 DP3B_SYNY3/1-3 99.4% 24.8% ERMVASQ-GNSDLVSLVVN-------DTQVIFELGD--QRLTSRKLEGAYPAYDQLIP--RQFSRTVTMERKRLITSLER 17 DP3B_STRPN/1-3 98.8% 20.6% SAVFTD---DIETVEIFFA-------NNQILFRSEN--ISFYTRLLEGNYPDTDRLIP--TDFNTTITFNVVNLRQSMER 18 DP3B_TREPA/1-3 99.1% 22.7% NRKLTP----EGSVTLCIT-------SQHVYFFFGG--YKFSSVLIEGQFPNYKRVIP--DHQERSFCVGRVELMEALKR 19 DP3B_LACLA/1-3 99.1% 21.9% KNVFTN---DEEEIEIFIS-------GSQMLFQNET--ISYYSRLIEGSYPDTNRLIPNEADYTLDLVFDAAQLRHTMDR 20 B3|Q9ZDB3/1-37 99.4% 27.3% LKIVKDPKNIHEDIEILLS-------SNKIKFICNEN-TILLSKLIDGTFPDYSAFIP--KSSVSKLVINRKIFADSIER 21 AD35350|AAD353 99.4% 25.9% QNVLDNT--TEPTITVRYD-------GRRVSLSTND--VETVMRVVDAEFPDYKRVIP--ETFKTKVVVSRKELRESLKR 22 DP3B_AQUAE/1-3 97.4% 26.1% KKLITG----IEDVNIEKSE-----DESFAYFSTPE--WKLAVRLLEGEFPDYMSVIP--EEFSAEVLFETEEVLKVLKR 23 K0|Q9Z8K0/1-35 98.0% 27.4% IKMCSD----EGEAAIFLD-------QDKIAVECDN--TLLITKLLSGEFPDFSPVIS--TESNVKLDLHREELITLLKQ 24 DP3B_MYCPN/1-3 98.8% 15.1% NSFNPE---GGDLISIFFRKEHKDDLSTELLIKLDN--FLINYTSINESFPRVMQLFD--FEPETKVTIQKNELKDALQR 25 X4|Q9ZLX4/1-36 96.2% 19.4% LKLFYE--------NFSFK-------SDGMLAVVENETHAFFTKLIDGNYPDYQKILP--KEYTSSFTLGKEEFKEGIKL 26 DP3B_MYCGE 98.3% 15.3% NSFNPE---EDKSIVFYYRKDNKDSFSTEMLISMDN--FMISYTSVNEKFPEVNYFFE--FEPETKIVVQKNELKDALQR consensus/100% .th..............h.............h.............lptthP.h..hh....t......ht...hht.h.. consensus/90% .phh.t.......hth.ht.......tt.hhh..tt..h.h..phlpupaPph..hh...tp.p..h.ht...hhp.htp consensus/80% .+hhsp....tt.lpl.hs.......pt.hhh.hts..hhhhspll-GpaPchppllP..pp.pt.hhhptt.hhpslpR consensus/70% t+hhss....tp.lplhhs.......psphhhphts..hhhho+Ll-GpaPchppllP..pp.pp.lshppttlhpulpR cov pid 321 . . : . . . . 4 400 1 DP3B_ECOLI/1-3 100.0% 100.0% AAILSN-EKFRGVRLYVS--ENQLKITANN----PEQEEAEE--ILDV------TYS---GAEMEIGF----NVSYVLDV 2 DP3B_HAEIN/1-3 100.0% 61.8% ASILSN-ERARSVRLSLK--ENQLKITASN----TEHEEAEE--IVDV------NYN---GEELEVGF----NVTYILDV 3 DP3B_PSEPU/1-3 100.0% 54.2% TAILSN-EKYRGIRLQLA--AGQLKIQANN----PEQEEAEE--EISV------DYE---GSSLEIGF----NVSYLLDV 4 DP3B_BACSU/1-3 99.7% 24.6% ASLLAREGRNNVVKLSAKP-AESIEISSNS----PEIGKVVE--AIVA------DQIE--GEELNISF----SPKYMLDA 5 DP3B_STAAU/1-3 99.7% 24.2% ASLLAREGGNNVIKLSTG--DDVVELSSTS----PEIGTVKE--EVDA------NDVE--GGSLKISF----NSKYMMDA 6 DP3B_CAUCR/1-3 99.7% 36.3% VATISA-EKSRSVKLAVE--PGRITLTVRN----MEAGQAVE--EVEV------DYD---GEPFEIGF----NARYLLDV 7 DP3B_SYNP7/1-3 99.7% 25.4% IAVLAD-QQNNAIRLSLDPENNRLALAVDA----QDVGSGQE--AVPA------EII---GEPLEIAF----NVRYLAEG 8 DP3B_BUCAP/1-3 100.0% 41.6% VAILAH-EKFCGIEIKIE--NGKFKVLSDN----QEEETAED--LFEI------DYF---GEKIEISI----NVYYLLDV 9 DP3B_MYCSM/1-3 98.6% 26.5% VALVAD--RGAQIRMEFS--DDTLKLSAGA----DDVGRAEE--DLPV------DFA---GEPLTIAF----NPTYLTDG 10 DP3B_MYCLE/1-3 98.6% 24.8% VALVAD--RGAQVRMEFG--DGILRLSAGA----DDVGRAEE--DLAV------AFT---GEPLTIAF----NPNYLTDG 11 DP3B_STRCO/1-3 98.6% 24.6% VALVA--ERNTPVRLSFE--QGVLILEAGS----SDDAQAVE--RVDA------QLE---GDDISIAF----NPTFLLDG 12 DP3B_BORBU/1-3 98.6% 18.9% VNLYVD--KSRKLVLTFS--ELQLKLLGED----LITGRKGEFFIKDP------NYLY-DGADEVMAI----NISYFVEA 13 DP3B_MYCCA/1-3 99.4% 17.7% FDLVADDGLPAIVNIKVN--EDKIEFKSFI----SEVGKYEE--DFDD------FVIE-GNKSLSISF----NTRFLIDA 14 DP3B_SPICI/1-3 96.8% 20.4% RSVLSNETMTTIVTLKIK--EQKVLVTSFT----QEIGNTEE--EIRD------FKVE--GTDQIIAF----NSKYILDA 15 AA82686|BAA826 99.7% 25.6% ALLLSREGKNQVINLKTLG-DGVVEVTAIT----PEIGKVTE--NVAT------QGLE--GEELRISF----NGKNVIDA 16 DP3B_SYNY3/1-3 99.4% 24.8% VSVLAD-QKNNLVTFTLQSPGNQLQLAVEA----QDLGHGEE--SMGA------EII---GEGGQIAF----NIKYLMDG 17 DP3B_STRPN/1-3 98.8% 20.6% ARLLSSATQNGTVKLEIK--DGVVSAHVHS----PEVGKVNE--EIDT------DQVT--GEDLTISF----NPTYLIDS 18 DP3B_TREPA/1-3 99.1% 22.7% VSLLVE-QKSHRIFITIQ--QGLLTLSSKAHTQENEIGDAQE--EIAC------AYT---GESEVIAL----NYLYLEEP 19 DP3B_LACLA/1-3 99.1% 21.9% ARLLTVMTTNGTVKLTVS--GDSVVTTANS----PEVGSVHE--ELTA------LSKE--GNDLSISF----NPEYLIDA 20 B3|Q9ZDB3/1-37 99.4% 27.3% IAIITV-EKFRAVKLSLS--RKILEISAVG----EARGTAKE--IITASQDKESFYEYNHDESLVIGF----NPQYLEDV 21 AD35350|AAD353 99.4% 25.9% VMVIAS-KGSESVKFEIE--ENVMRLVSKS----PDYGEVVD--EVEV------QKE---GEDLVIAF----NPKFIEDV 22 DP3B_AQUAE/1-3 97.4% 26.1% LKALSE-GKVFPVKITLS--ENLAIFEFAD----PEFGEARE--EIEV------EYT---GEPFEIGF----NGKYLMEA 23 K0|Q9Z8K0/1-35 98.0% 27.4% VALFTN-ESSHSVKFSFL--PGELTLTANC----TKVGEGKV--SMAV------NYS---GELLEIAF----NPFFFLDI 24 DP3B_MYCPN/1-3 98.8% 15.1% ILTLAQNERFFLCDMQVT--NSHLKINSNV----QNIGASLE--EVTC------LKFE--GHKLNIAV----NALSLLEH 25 X4|Q9ZLX4/1-36 96.2% 19.4% CSSLSS-----TIKLTLE--KNNALFESLD----SEHSETAK---TSV------EIEK--GLDIEKAFHLGVNAKFFLEA 26 DP3B_MYCGE 98.3% 15.3% IQTLAQNERTFLCDMQIN--SSELKIRAIVN----NIGNSLE--EISC--------LKFEGYKLNISF----NPSSLLDH consensus/100% h..hs.......h.h.h......h.h...........tt......h..............s....huh....s...h.-. consensus/90% h.hls.......lphpht..tt.h.h.s.s.....p.tps.-...h.s............Gt...luh....N...h.-h consensus/80% htllup.tp.t.lphphp..ts.ltlpu.s.....-hups.E...hss.......h....Gp.hpIuF....Nspalh-s consensus/70% ssllup.tpst.lclphp..ps.lplputs.....-hGpstE..tlss......th....GpplpIuF....NspalhDs cov pid 401 . . . ] 440 1 DP3B_ECOLI/1-3 100.0% 100.0% LNALKCENVRMML--TDSVSSVQIEDAA-SQS--AAYVVM 2 DP3B_HAEIN/1-3 100.0% 61.8% LNALKCNQVRMCL--TDAFSSCLIENCE-DSS--CEYVIM 3 DP3B_PSEPU/1-3 100.0% 54.2% LGVMTTEQVRLIL--SDSNSSALLQEAG-NDD--SSYVVM 4 DP3B_BACSU/1-3 99.7% 24.6% LKVLEGAEIRVSF--TGAMRPFLIRTPN-DET--IVQLIL 5 DP3B_STAAU/1-3 99.7% 24.2% LKAIDNDEVEVEF--FGTMKPFILKPKG-DDS--VTQLIL 6 DP3B_CAUCR/1-3 99.7% 36.3% CGQIAGPQAEFRF--ADPASPTLVVDPV-DPG--VKYVLM 7 DP3B_SYNP7/1-3 99.7% 25.4% LKALNTTDIQIQL--NSNTSPVVLSPLG-PVK--ITYLVM 8 DP3B_BUCAP/1-3 100.0% 41.6% INNIKSENIALFL--NKSKSSIQIEAEN-NSS--NAYVVM 9 DP3B_MYCSM/1-3 98.6% 26.5% LGSLHSERVTFGF--TTPSRPAVLRPAG-EDD--GANGGS 10 DP3B_MYCLE/1-3 98.6% 24.8% LASVHSERVSFGF--TTPSKPALLRPTS-NDD--VHPTHD 11 DP3B_STRCO/1-3 98.6% 24.6% LSAIDSPVAQLSF--TTSTKPALLSGRP-AVD--AEADEA 12 DP3B_BORBU/1-3 98.6% 18.9% ISVFETSKIEIQF--NSGN-VLKLSEPE-NFN--FTHLIM 13 DP3B_MYCCA/1-3 99.4% 17.7% IKTLSEDRIELKL--INSTKPIVINNVY-DEH--LKQVIL 14 DP3B_SPICI/1-3 96.8% 20.4% LKAFKTKEITIKM--IDERKPLIITAND-DQT--LQQLVL 15 AA82686|BAA826 99.7% 25.6% LKVVDSESIHIAF--TGAMSPFVLSPTD-HDQ--SLHLFS 16 DP3B_SYNY3/1-3 99.4% 24.8% LKALPSNDIQMQL--NEGNQPVIFTPLG-GLK--MTYLVM 17 DP3B_STRPN/1-3 98.8% 20.6% LKALNSEKVTISF--ISAVRPFTLVPADTDED--FMQLIT 18 DP3B_TREPA/1-3 99.1% 22.7% LKVFTSKEVQVEF--TDPAKALTLRAVP-NTD--CFHIIM 19 DP3B_LACLA/1-3 99.1% 21.9% LKVIKAPEVRIRF--ISNVRPFTLQPRN-EES-GFVQLIT 20 B3|Q9ZDB3/1-37 99.4% 27.3% LKAIKSDIVELYFSDISASAPVLIKFPR-NPK--DIFVIM 21 AD35350|AAD353 99.4% 25.9% LKHIETEEIEMNF--VDSTSPCQINPLD-ISG--YLYIVM 22 DP3B_AQUAE/1-3 97.4% 26.1% LDAYDSERVWFKF--TTPDTATLLEAED-YEKEPYKCIIM 23 K0|Q9Z8K0/1-35 98.0% 27.4% LKHSKDELVSLGI--SDSYNPGIITDSA-SGL----FVIM 24 DP3B_MYCPN/1-3 98.8% 15.1% IDSFDTDEIELYF--QGSNKYFLISSNN-EPE--LKEILV 25 X4|Q9ZLX4/1-36 96.2% 19.4% LNALGTTQFVLKC--NEPSSPFLIQEPL-DEK--QSHLNA 26 DP3B_MYCGE 98.3% 15.3% IESFESNEINFDF--QGNSKYFLITSKS-EPE--LKQILV consensus/100% ht...t..h.h.h...t....h.h................ consensus/90% lt.hts..hth.h...ts.psh.lp......t.....hh. consensus/80% lpshpspplphth...ss.pshhlps.s.p.p.....llh consensus/70% Lpshpspplphth..tssspshllps.s.s.p..hh.llh