Family alignment for the POLBc domain, displayed in

                     cov    pid    1 [        .         .         .         .         :         .         .         . 80  
 1 DPOL_RHCM6/1-4 100.0% 100.0%      PVYRCLSFDIECMSA---------------SGGFPAAEQT------------DDIVIQISCVCYNTGGTGCEE-------     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      PEYRCASFDIECMSG---------------GDRFPDSSMV------------DDIVIQISVICYAVGRSGAESDG-----     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      PFYRCLSFDIECMSG---------------TGAFPAAENV------------DDIIIQISCVCFGVGEMVHHAYDV----     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      PRYRCLSFDIECMSG---------------EGGFPCAEKS------------DDIVIQISCVCYETGGNTAVDQGIPNGN     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      PPYRCLSFDIECMSA---------------SGAFPQAEVL------------DDIVIQISCVCFVVGGSGA---------     
 6 DPOL_EBV/1-479  96.9%  43.4%      PSYQALAFDIECLG----------------EEGFPTATNE------------ADLILQISCVLWSTGEE-----------     
 7 AD49652|AAD496  96.9%  47.0%      PLYGCWSFDIECLGQ---------------NGNFPDAENL------------GDIVIQISVVSFDTEG------------     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      PDYKLMCFDIECKAGT------------GNEMAFPVATNQ------------EDLVIQISCLLYSLATQ-----------     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      PLYDCCSFDIECLSQ---------------NGNFPDAEQM------------VTSSL-ISVIDFDSEG------------     
10 DPOL_HSVSA/1-4  95.9%  41.4%      PPYNIMSFDIECIG----------------EKGFPCAKNE------------GDLIIQISCVFWHAGAL-----------     
11 DPOD_SOYBN/1-4  93.6%  31.0%      APFRILSFDIECAGR---------------KGHFPEPT--------------HDPVIQIANLVTLQGED-----------     
12 DPOD_CANAL/1-4  93.8%  30.3%      APLRILSFDIECAGR---------------KGVFPEAE--------------HDPVIQIANVVQKSGES-----------     
13 DPOL_HSV1K/1-5  97.1%  36.1%      PAYKLMCFDIECKAGG------------EDELAFPVAGHP------------EDLVIQISCLLYDLSTT-----------     
14 DPOD_YEAST/1-4  93.8%  31.0%      APLRIMSFDIECAGR---------------IGVFPEPE--------------YDPVIQIANVVSIAGAK-----------     
15 DPOD_PLAFK/1-4  93.8%  30.8%      PKLRILSFDIECIKL--------------DGKGFPEAK--------------NDPIIQISSILYFQGEP-----------     
16 DPOD_HUMAN/1-4  93.6%  30.5%      APLRVLSFDIECAGR---------------KGIFPEPE--------------RDPVIQICSLGLRWGEP-----------     
17 AD55134|AAD551  97.1%  37.8%      PDYKLMCFDIECKSGG-------------DELAFPVATNH------------DDLVIQISCLLYDVPSH-----------     
18 AB58156|CAB581  93.8%  31.2%      APLRIMSFDIECAGR---------------KGVFPDPS--------------IDPVIQIASIVTQYGDS-----------     
19 DPOD_DROME/1-4  94.0%  32.5%      APFRILSFDIECAGR---------------KGIFPEAK--------------IDPVIQIANMVIRQGER-----------     
20 DPOL_HSVE2/1-4  95.9%  41.4%      PGYNVLSFDIECLG----------------ENGFPNASRD------------EDMILQISCVIWKAGSG-----------     
21 DPOL_VZVD/1-52  97.1%  36.6%      PDYKLLCFDIECKSGG------------SNELAFPDATHL------------EDLVIQISCLLYSIPRQ-----------     
22 DPOA_HUMAN/1-4  92.2%  19.2%      PPLVVMAFSMKTMQN----------------AKNHQNEII-----------AMAALVHHSFALDKAAPKPPFQS------     
23 DPOL_CHVP1/1-4  92.8%  26.0%      PPLVIASWDIETYSK---------------DRKFPLAENP------------TDYCIQIATTFQKYGEP-----------     
24 DPOL_THEGO/1-4  85.4%  22.3%      EELKMLAFDIETLYH---------------EGEEFAEG----------------PILMISYADEEGAR------------     
25 DPOA_ORYSA/1-5  91.8%  20.6%      PPVVVAAVNLKTIINE------------KHNVHEIVSASV-----------ICCHRVKIDSPMRSEDWQKRGML------     
26 DPOL_RSIV/1-50  91.3%  22.3%      PPAKIVYFDIEVKSD--------------HENVFPSDRD-------------DEVIFQIGLVLCSGTT------------     
27 DPOA_YEAST/1-4  92.2%  20.2%      PNLRCLSLSIQTLMNP------------KENKQEIVSITL-----------SAYRNISLDSPIPENIKPDDL--------     
28 DPOL_METTH/1-4  84.7%  20.4%      HGLDILSFDIEVRNP----------------HGMPDPE--------------KDEIVMIGVAGNMGYE------------     
29 DPOA_SCHPO/1-4  89.9%  17.9%      PPMTVMSLAFRTLIN-------------------KEQN--------------KQEVVMISARIFENVDIEK---------     
30 DPOL_ARCFU/1-3  80.4%  21.6%      PELKMLVFDCEMLSS----------------FGMPEPE--------------KDPIIVISVKTNDDDE------------     
31 AA82926|BAA829  95.5%  35.2%      PDYKLLCFDIECKSGG------------ANECAFPVATNE------------EDVVIQISCLMYSVRQK-----------     
32 DPOA_DROME/1-4  87.2%  17.5%      PPLTLLSLNVRTSMN----------------PKTSRNEIC-----------MISMLTHNRFHIDRPAPQ-----------     
33 AD56202|AAD562  97.3%  37.8%      PDYKLLCFDIECKAGG------------ANEFAFPSAEKV------------EDLVIQISAVTYSLLTK-----------     
34 DPOL_VARV/1-51  95.5%  14.6%      KQLLELTFDYIVTFN---------------GHNFDLRYIT-----------NRLELLTGEKIIFRSPDK-----------     
35 DPOL_ASFL6/1-4  93.8%  19.4%      DHSIVMAYDIETYSP--------------VKGTVPDPNQA------------NDVVFMICMRIFWIHST-----------     
36 DPOA_LEIDO/1-4  94.0%  20.1%      PPFTLASIQIHTQLDSKG----------ACNEILIASVAI-----------YKDVNIENTIRYIPDNILTGV--------     
37 DPOA_OXYNO/1-5  92.0%  19.3%      PPLTSVTFAIKTCRSSQN----------------------------------TNEIAMLSCIVNENISQEG---------     
38 DPOL_METVO/1-4  83.9%  19.8%      PELNCIAFDMELYCK-----------------KEPNAK--------------KDPIIMVNLFSKDYQK------------     
39 DPOL_ORFN2/1-5  95.7%  14.2%      KRLLEMPLDFVVTFN---------------GHNFDLRYLD-----------SRLSLLTGEHIRFRLPDG-----------     
40 DPOL_NPVOP/1-4  89.1%  18.3%      IAPVMACYDIETHSD---------------GHNSSKPE--------------CDVIMCIGLAVFKNDR------------     
41 DPOL_NPVBM/1-4  89.1%  18.6%      IMPVLSCYDIETHSD---------------GHNMSKAS--------------VDCIMSIGFVVYKNDE------------     
42 DPOL_FOWPV/1-5  93.4%  13.7%      KKILEHRFDFVITFN---------------GNNFDIRYIS-----------GRLEILEKSFIYFSLPD------------     
43 DPOL_SULAC/1-4  87.6%  19.1%      PDIKRVSLDIEVYTP--------------NRGRIPDPERA------------EFPIISVALAGNDGSKI-----------     
44 AB55093|CAB550  88.2%  19.3%      PTIKLLALNVVTTLNDRK----------------------------------DNEICMISMLFNPKCDLAHPS-------     
45 AB57747|CAB577  87.8%  17.7%      PKIKRVAIDIEVYTP--------------VKGRIPDSQKA------------EFPIISIALAGSDGLKK-----------     
46 DPOA_TRYBB/1-4  93.2%  20.3%      PPFTVASIQLHAQLD-------------------SDGV--------------KNEVIAASIALYGDVSIDGERKPNIT--     
47 DPO1_SULOH/1-4  86.4%  18.3%      PDVKRVAIDIEVYTP--------------IKGRIPDPEKA------------EFPIISISLAGNDGTK------------     
48 46|DPO2_AERPE/  82.7%  19.6%      KGLRVMAFDIEVYSK----------------MRTPDPK--------------KDPVIMIGLQQAGGE-------------     
49 DPOL_BPT4/1-49  88.9%  14.7%      DSIDDRFYVFDLLNS----------------MYGSVSK--------------WDAKLAAKLDCEGGDE------------     
50 DPOL_CBEPV/1-5  95.7%  13.3%      LYTLRKDFDYILTYN---------------GHSFDFTYIQ-----------GRRKFYNLNELCLVNAHK-----------     
51 DPOL_THELI/1-4  83.1%  16.4%      EELKLLAFDIETFYH---------------EGDEFGKG----------------EIIMISYADEEEAR------------     
52 DPOL_NPVLD/1-5  89.9%  17.8%      ILPVVACYDIETHSD---------------GQRFSAPD--------------ADFIISIAVVVRRDAA------------     
53 DPO3_SULSH/1-3  78.6%  13.1%      PELRAIGIDFQIYSK----------------YGSLNPR--------------KDPIVVLSLWSKEG--------------     
54 45|DPO1_AERPE/  86.4%  21.3%      PKLPLIAFDIEVYSP--------------IATRLPDPSTA------------PYPVISAATADSSGRSRV----------     
55 DPOL_BPR69/1-5  92.4%  17.8%      TKIRVANFDIEVTSP----------------DGFPEPSQA------------KHPIDAITHYDSIDDRFYVFDLLNSPYG     
56 DPO2_SULSO/1-3  76.3%  11.6%      EKTIRTTFPVYTITDN------------------------------------PDIVLQHPEVRYYEKE------------     
57 AF07803|AAF078  92.6%  21.2%      QQLTILSIEVHAESR---------------GDLRPDPR--------------FDSVNVIALVVQNDDS------------     
58 410720|G410720  92.6%  13.2%      SDINLNKLYIKVVSL-------------------LNEEN-------------VHEIFSICSLVQIDKLKYI---------     
59 DPOL_HSVI1/1-4  91.3%  10.3%      SQVLIQRFREAGVTG---------------LPPSPFVGITQ----------KLHEIVSISLVVCNYHKT-----------     
60 AF05246|AAF052  89.7%  16.9%      IDSIVASYDLETFTN---------------GFQLSNPD--------------TDPIITIALTIKRHNN------------     
61 DPOZ_YEAST/1-4  89.5%  21.2%      PAIDEVSMIIWCLE----------------EETFPLDLDI------------AYEGIMIVHKASEDSTF-----------     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      PEFDPICALFYCISS---------------DTPLPDTEKTEL---------TGVIVIDKDKTVFSQDI------------     
63 DPOL_BPB03/1-3  76.1%   8.9%      MPRKMFSCDFETTTKL------------------------------------DDCRVWAYGYMEIGN-------------     
64 DPO2_ECOLI/1-4  79.4%  16.5%      PPLKWVSIDIETTR--------------------------------------HGELYCIGLEGCGQ--------------     
65 AB58420|CAB584  88.0%  13.1%      SEVLAVGLGQATTAT--------------------NSTIA------------VRVFCVAAPLRCSAAR------------     
66 AC19148|AAC191  89.7%  11.6%      PDPVVLAFDIETTKL---------------PLKFPDAE--------------TDQIMMISYMIDGQGYLIT---------     
67 AD46482|AAD464  90.5%  11.7%      PDPVVLAFDIETTKL---------------PLTFPDAE--------------TDQIMMISYMIDGQGYLIT---------     
68 DPOE_YEAST/1-6  88.7%  11.1%      ADPVVMAFDIETTKP---------------PLKFPDSA--------------VDQIMMISYMIDGEGFLIT---------     
69 DPOL_BPPZA/1-4  81.0%   7.7%      MPRKMYSCDFETTTKV------------------------------------EDCRVWAYGYMNIEDH------------     
70 DPO1_KLULA/1-5  79.4%  10.8%      VKNITVCFDIESYFD-----------------PEKESNQV------------NIPFICCASIIYNKVIGN----------     
71 Q9YQZ6          92.8%  15.8%      TPFRAASFDIETIVDR--------------KRYAPNYTVSPL---------YVRNAAAISDRNNIHASTGVLLSHTSINP     
72 O74719          95.7%   9.3%      TEKITVCFDIEAYFD--------------PDSENDQTHIPYL---------CCACFVYNDVIGNVIEFEG----------     
73 DPOM_NEUCR      92.8%  13.0%      QDKKILAFDIETFQV-------------------PTGNG-------------DSTMIAYACGFYDGKKS-----------     
74 DPOL_BPPRD      83.7%  11.0%      VEYKIAAFDFETDPFK--------------HDRIPKP---------------FSWGFYNGEIYKDYWGD-----------     
75 Q09038          94.6%   8.5%      TNTEEIFFDIESFTNEKNFQIPY-----LICWSKTNGSIHKRI-----GKNCINDFVQYIINLKKNVILYAWFG------     
76 DPO2_KLULA      94.2%   8.1%      KEVKEVFFDIESFSDETKHQIPY-----LICWSYLGELYYRTG------KNCIKEFVEEILSYNVDIILYAWYG------     
77 O78938          96.5%  11.0%      RDTKIISMDLETILIN--------------NKHIPYLLS------------WYDGNITKSYFIDSIENNIEN--------     
78 O21376          93.4%  10.4%      MNNMMGSFDIETTSG----------------FDHERIMG-------------VSWIMKPLEMLQELSVN-----------     
79 O99973          88.5%  11.9%      LKYNVLFCDIETIVI--------------------------------------ECVHYPFAAGFTSKK------------     
80 P78988          95.7%   9.9%      EDKNIGSIDIETYLNE-------------NNEAVPYAIG-------------FKTVKGTKLFYLDSYSNP----------     
81 O11414         100.0%   9.7%      TKRLYVVYDIETYTYHSKYG----------KQLVPYLLVFQLF--------GEETLIDLAKAEAEMVGYTAYDGCF----     
82 S07183          94.2%   9.4%      NKTLFFVADLETLLLK--------------RRDTDVDKT-------------HVPYAGGYMMVDMEKR------------     
83 Q83895          99.6%   9.2%      AKRLFIVYDIETYTYHSLYG----------KQLTPYLLVFKLI--------GCKSLIKIASKIATDIGYEVN--------     
84 DPOM_NEUIN      94.4%  10.6%      ENPKIITLDLETRSVP------------------------------------IHPIKEGKDGKEGKVDS-----------     
85 Q96206          88.7%   8.6%      MARSVYVCDFETTTD-------------------PEDCR-------------LWAWGWMDIYNTDKWS------------     
86 DPOM_PODAN      93.8%   9.5%      LNSRIGTFDLETFRDYN-------------SNSAVYALGFSTL-----SMSKTDKKTSMYYLTKDGNTS-----------     
87 DPOL_ADEB2     100.0%  10.1%      TKRFFLTYDVETYTWHGKHG----------KQLVPFMLVFHLS--------GELELVSLSANIAEQQRWLAWDTPHTY--     
88 DPOL_ADE07     100.0%   9.0%      TERLFLTYDVETYTWMGSFG----------KQLIPFMLVMKLS--------GDQRLVNIAYDIAMKLKWDRWRQDP----     
89 DPOM_CLAPU      93.4%   8.8%      ANPNLGTIDLETTTG---------------AQPKCYAIGFYT----------NLDSKPIKFYIDKNLDS-----------     
90 DPOL_ADEB3     100.0%   9.0%      TRRLFVVYDVETYTWHGSFG----------KQLMPFMLVFTLF--------GDAQLCEQAVNIAKKQKWSSWPKQAN---     
91 Q9YUR6         100.0%   9.6%      TKKLFLIYDIETFTLAETSG----------VLLNPLLLCFSIFGDDCLINICKTEIAKIKSIQTKNSTYFWFSKVKN---     
92 Q39432          91.8%  12.3%      GMTPFLVADTETILYDG-------------MDLDPISR--------------DKFFMGLDPTPFDKDKK-----------     
93 O62074          98.4%   8.5%      KTYKVIVYDMECIVAN--------------SGEYTEHVERGPK--------HKPNLICTQMFCNECMGGGQ---------     
94 DPOM_ASCIM      92.0%   9.9%      NLKSISTLDLETRMDT------------------------------------NNRLIPICMSYYNNKKLN----------     
95 DPOM_AGABT      95.5%   9.3%      HDLRIGSLDLETYGDN----------------CFELGLG-------------NLNVYAGGFALNDGFKK-----------     
   consensus/100%                    .......h........................................................................     
   consensus/90%                     ....hhshshtsh..........................................hh.h.....................     
   consensus/80%                     ..hhhhshDlcsh........................................t.hh.hs.hh.t..t............     
   consensus/70%                     s.hhhhshDlEsht...................hs.s...............tp.lhthshhh.tttt............     

                     cov    pid   81          .         1         .         .         .         .         :         . 160 
 1 DPOL_RHCM6/1-4 100.0% 100.0%      ------------NTVFGTSGLHLFTIG--SCAPLAG------------------VDVYEFP------------SEYEMLL     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      ---------VSGAEAAVREHQHLFTLG--PCAPIPG------------------THVYEFP------------SEYELLL     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      ---------HADLSTPAVPENHLFTIG--PCAPIPD------------------VKIYTFP------------SEYEMLR     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      DGR----GCTSEGVIFGHSGLHLFTIG--TCGQVGP-----------------DVDVYEFP------------SEYELLL     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      -------------HRFTFAEKHLFTIG--SCAPVED------------------VWVYTFP------------SEYEMLL     
 6 DPOL_EBV/1-479  96.9%  43.4%      ---------------AGRYRRILLTLG--TCEDIEG------------------VEVYEFP------------SELDMLY     
 7 AD49652|AAD496  96.9%  47.0%      ----------------DRDERHLFTLG--TCEQIDG------------------VHIYEFA------------SEFELLL     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      ----------------NHEHTLLFSLG--SCDISEEYSFACV------QRGEPRPTVLEFD------------SEYELLV     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      ----------------NYQSKHLFTLG--TCEQIEG------------------VFIYEFA------------SEFELLY     
10 DPOL_HSVSA/1-4  95.9%  41.4%      ----------------DTTRNMLLSLG--TCSAVEN------------------TEVYEFP------------SEIDMLH     
11 DPOD_SOYBN/1-4  93.6%  31.0%      ----------------QPFIRNVMTLK--SCSPIVG------------------VDVMPFE------------TEREVLL     
12 DPOD_CANAL/1-4  93.8%  30.3%      ----------------KPFVRNVFTVN--TCSSIIG------------------SQIFEHQ------------REEDMLM     
13 DPOL_HSV1K/1-5  97.1%  36.1%      ----------------ALEHVLLFSLG--SCDLPESHLNEL------AARGLPTPVVLEFD------------SEFEMLL     
14 DPOD_YEAST/1-4  93.8%  31.0%      ----------------KPFIRNVFTLN--TCSPITG------------------SMIFSHA------------TEEEMLS     
15 DPOD_PLAFK/1-4  93.8%  30.8%      ---------------IDNCTKFIFTLL--ECASIPG------------------SNVIWFN------------DEKTLLE     
16 DPOD_HUMAN/1-4  93.6%  30.5%      ----------------EPFLRLALTLR--PCAPILG------------------AKVQSYE------------KEEDLLQ     
17 AD55134|AAD551  97.1%  37.8%      ----------------RLDHVMLFSLG--SCDIPESFSESL------RNRGLPEPLVLEFD------------SEFEMLL     
18 AB58156|CAB581  93.8%  31.2%      ----------------TPFVRNVFCVD--TCSQIVG------------------TQVYEFQ------------NQAEMLS     
19 DPOD_DROME/1-4  94.0%  32.5%      ----------------EPFIRNVFTLN--ECAPIIG------------------SQVLCHD------------KETQMLD     
20 DPOL_HSVE2/1-4  95.9%  41.4%      ----------------EAPRSVLLNLG--TCEEIEG------------------VEVYQCP------------SELDLLY     
21 DPOL_VZVD/1-52  97.1%  36.6%      ----------------SLEHILLFSLG--SCDLPQRYVQEM------KDAGLPEPTVLEFD------------SEFELLI     
22 DPOA_HUMAN/1-4  92.2%  19.2%      -----------HFCVVSKPKDCIFPYA--FKEVIEKK----------------NVKVEVAA------------TERTLLG     
23 DPOL_CHVP1/1-4  92.8%  26.0%      ----------------EPYRRVVVCYK--QTAPVEG------------------VEIISCL------------EESDVMN     
24 DPOL_THEGO/1-4  85.4%  22.3%      ----------------VITWK-----------NIDL------------------PYVDVVS------------TEKEMIK     
25 DPOA_ORYSA/1-5  91.8%  20.6%      ----------SHFTVMRKLEGSIFPIG--LSKESSDR------------NQKAGSNVLALE-----------SSERALLN     
26 DPOL_RSIV/1-50  91.3%  22.3%      -----------------VLRTDLLSLP--GRDYDAS--------------------VYQYA------------TEGELLH     
27 DPOA_YEAST/1-4  92.2%  20.2%      ------------CTLVRPPQSTSFPLG--LAALAKQKLP---------------GRVRLFN------------NEKAMLS     
28 DPOL_METTH/1-4  84.7%  20.4%      -------------------------------SVIST-------------AGDHLDFVEVVE------------DERELLE     
29 DPOA_SCHPO/1-4  89.9%  17.9%      --------------GLPANDMPSYSFS--LIRPLKQIFPNGF-----EKLARQHKSSIFCE-----------RSEVSLLN     
30 DPOL_ARCFU/1-3  80.4%  21.6%      --------------------------------------------------------IILTG------------DERKIIS     
31 AA82926|BAA829  95.5%  35.2%      ----------------QLEHALLFALG--SCDLPET--------------------------------------FQETFR     
32 DPOA_DROME/1-4  87.2%  17.5%      ----------------PAFNRHMCALT--RPAVVSWPLDLNF-----EMAKYKSTTVHKHD------------SERALLS     
33 AD56202|AAD562  97.3%  37.8%      ----------------EKEQEIIFSLG--TCELSED--------------CSDGITVCKCG------------SEFELLL     
34 DPOL_VARV/1-51  95.5%  14.6%      ----------------KEAVHLCIYER--NQSSHKGV------------GGMANTTFHVNN------------NNGTIFF     
35 DPOL_ASFL6/1-4  93.8%  19.4%      ----------------EPLASTCITMA--PCKKSPE------------------WTTIVCS------------SEKNLLL     
36 DPOA_LEIDO/1-4  94.0%  20.1%      -------------RPASMSTPLPIDLE--SYCSAKG-----------------LPGVRRFA------------NERALLD     
37 DPOA_OXYNO/1-5  92.0%  19.3%      --------------PSKIDVHKSFTLL----RKLDGKPMPIEYE--RAFRDKKDSFIQFFQ------------HERQLIE     
38 DPOL_METVO/1-4  83.9%  19.8%      ----------------------VITYK--KFENSEYN-----------------GCVDYVK------------DEKELIQ     
39 DPOL_ORFN2/1-5  95.7%  14.2%      ----------------TETVNFCVYER--TKSSHKGV------------GGVSSTTFHINN------------NNGTIYF     
40 DPOL_NPVOP/1-4  89.1%  18.3%      -----------------FEKVCFVYHS--EAVEIPQ--------------ASDDTYVVVFN------------NENHMIT     
41 DPOL_NPVBM/1-4  89.1%  18.6%      -----------------YARFCFMYHK--LPTEIPE-------------THDDDTHVVMFQ------------NEVDMIT     
42 DPOL_FOWPV/1-5  93.4%  13.7%      -----------------------------ATETVKLKIFERF----VTGGTFTNKTYHINN------------NNGVMFF     
43 DPOL_SULAC/1-4  87.6%  19.1%      ----------------VLALKREDVNS--DFSKKDG------------------VQVEIFD------------SEKKLLA     
44 AB55093|CAB550  88.2%  19.3%      ------------GDSKDLKPKCLVTKP--PGGSLPYDIQKRL------ETEKLSKFVKSVA------------NEKALLT     
45 AB57747|CAB577  87.8%  17.7%      ----------------VLVLNRNDVNE--GSVKLDG------------------ISVERFN------------TEYELLG     
46 DPOA_TRYBB/1-4  93.2%  20.3%      -------ECFTGVRQLSPDAPLPLDLE--TYCLSKRM-----------------PGVHRFI------------NERALLT     
47 DPO1_SULOH/1-4  86.4%  18.3%      --------------------RVLVLLR--EDVNSQI--------------TKHDVIVETFK------------SERELIR     
48 46|DPO2_AERPE/  82.7%  19.6%      ------------------------------------------------------IEILEAED----------RSDKKVIA     
49 DPOL_BPT4/1-49  88.9%  14.7%      --------------------------V--PQEILDR------------------VIYMPFD------------NERDMLM     
50 DPOL_CBEPV/1-5  95.7%  13.3%      ---------------SNELKIYSYNKD--TTYEIDS--------------NNGIIFLDLYN-----------YIKKIYNY     
51 DPOL_THELI/1-4  83.1%  16.4%      ----------------VITWK-----------NIDL------------------PYVDVVS------------NEREMIK     
52 DPOL_NPVLD/1-5  89.9%  17.8%      ------------------DTRICLFYS--PDDPVDLSSSSS------SPPAAPDTAAVHFR------------AERDMIA     
53 DPO3_SULSH/1-3  78.6%  13.1%      --------------------------------SMQF------------------SLDESMD------------DLK-IIR     
54 45|DPO1_AERPE/  86.4%  21.3%      --------------VLLYRDGVEFTEG----ALPEG------------------TEVEIYD------------SERAMLL     
55 DPOL_BPR69/1-5  92.4%  17.8%      N------VEEWSIEIAAKLQEQGGDEV--PSEIIDK------------------IIYMPFD------------NEKELLM     
56 DPO2_SULSO/1-3  76.3%  11.6%      -----------------------------KWKTLDG------------------KEVKVYR------------FEVESLD     
57 AF07803|AAF078  92.6%  21.2%      -----------------FVAEVFVLLF--SPDSIDQR----------NVDGLSGCKLSVFL------------EERQLFR     
58 410720|G410720  92.6%  13.2%      -------------NFCGISRK-CSKKG--TMYNYNK------------------TLCKLFD------------NEKELLH     
59 DPOL_HSVI1/1-4  91.3%  10.3%      ----------------GPKKKEYYVYY--NTKKMENPMEMIP-----VEHLHLDASRIKFE------------ACKNEFY     
60 AF05246|AAF052  89.7%  16.9%      ----------------QLLRYCLINSV--QRPDLSDPYTQ-------VDNVDGEAVVVPFN------------NERDMIV     
61 DPOZ_YEAST/1-4  89.5%  21.2%      ----------------PTKIQHCI----------NE------------------IPVMFYE------------SEFEMFE     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      ----------------RYQTPLLI------RSGITG------------------LEVTYAA------------DEKALFH     
63 DPOL_BPB03/1-3  76.1%   8.9%      ------------------------------------------------------LDNYKIG------------NSLDEFM     
64 DPO2_ECOLI/1-4  79.4%  16.5%      --------------------RIVYMLG--PENGDAS---------------SLDFELEYVA------------SRPQLLE     
65 AB58420|CAB584  88.0%  13.1%      ----------------AATHP-----------SAAGRPPPL-------VGLTEAVQVVTMP------------DEAALLA     
66 AC19148|AAC191  89.7%  11.6%      ------------NREIVSEDIEDFEFT--PKPEYEG------------------PFCVFNE-----------PDEAHLIQ     
67 AD46482|AAD464  90.5%  11.7%      ------------NREIVSEDIEDFEFT--PKPEYEG------------------PFCVFNE-----------PDEVHLIQ     
68 DPOE_YEAST/1-6  88.7%  11.1%      ------------NREIISEDIEDFEYT--PKPEYPG------------------FFTIFNE-----------NDEVALLQ     
69 DPOL_BPPZA/1-4  81.0%   7.7%      ----------------------------------SE---------------------YKIG------------NSLDEFM     
70 DPO1_KLULA/1-5  79.4%  10.8%      --------------IVDFEGRDCV-------AQMIE---------------------YVVD------------ICGELNI     
71 Q9YQZ6          92.8%  15.8%      LDYGPITSIAVVLADTKPKRRYVFYNG--QLAGCEPVPVQG--------SYWVSSHLQLVRC----------ADEAEVIG     
72 O74719          95.7%   9.3%      --------------RDCVAQMIEYIVD--ICSELKNK----------------NIELIAHN-----------GGAYDFHY     
73 DPOM_NEUCR      92.8%  13.0%      ------------------------------------------------------LTYYISDF----------ISQREMLL     
74 DPOL_BPPRD      83.7%  11.0%      ----------------DCIEQFIYWLD--TIEEPHV------------------IYAHNGGK----------FDFLFLMK     
75 Q09038          94.6%   8.5%      ---------------SGYDYQHVLPYF--KKKCIKDKYIIKN----------NMITYSELYF----------KHSKIILK     
76 DPO2_KLULA      94.2%   8.1%      ---------------SGYDYQHVLPYM--KSKCIKDKYIIKN----------NMITYGELYY----------ENAIIYLK     
77 O78938          96.5%  11.0%      ----------------NIENMISRAMN--DICIRKYKN--------------YKVYLHNFAK-----------FDGYFLV     
78 O21376          93.4%  10.4%      ----------------DNLKINTTTMT--DVTNAD-------------------MYDESCMY----------QGYNMLIE     
79 O99973          88.5%  11.9%      ----------------RLRCDISFADN--REDIING--------------------VVIYK-------------MFESIK     
80 P78988          95.7%   9.9%      ----------------SNMILDCIQYM--LVKENHN----------------FKFYAHNMGE----------FDGVFLLK     
81 O11414         100.0%   9.7%      -------YILNKDPEVVGQSFKLFRSN--LQDKVTNLAWER-------FCEDNALDPYSRIT----------AKQLQKLN     
82 S07183          94.2%   9.4%      ---------------VNADHITTFYAH--DYSKVCQ-------------------DFHDMSE----------KMLTEMIN     
83 Q83895          99.6%   9.2%      -----------RECFVMLNKKEDEIGI--AFKKFRTELQISVAK--KYWSTFCENHGLESNL----------SYEDIMVL     
84 DPOM_NEUIN      94.4%  10.6%      -----------------IMFPILMSVY--NGKFVKS-------------------FLFS-QS----------AWETEMMN     
85 Q96206          88.7%   8.6%      ----------------YGEDIDSFMEW--ALNSNSD--------------------IYFHN--------------LKFDG     
86 DPOM_PODAN      93.8%   9.5%      ---------------HEIIIKCINEML--SSDYRDHIYFTHNLG---GYDIIFILHALKLENKI------ILENKLKGIN     
87 DPOL_ADEB2     100.0%  10.1%      -------YYVSPIKGEIGKAFKDLRYE--IQKQVTRLLWDN--------FVGENPELAEIQERH------HVNHIDDITA     
88 DPOL_ADE07     100.0%   9.0%      -----------QTFYCITPEKMAVGQH--FRQYRDQLQTALAVDL-WSSFLKANPHMHEWALEHY-----ALTDPTDLTF     
89 DPOM_CLAPU      93.4%   8.8%      ----------------CQLVHTCIQEM--MRYKYRN------------------VLFYAHN-----------LGKFDAVF     
90 DPOL_ADEB3     100.0%   9.0%      ------------TFYYLNPQRNKVGSL--FKQYRDALQEAASTLL-WRQFLADNPCLENLCLKLG-----YVHASDIPFE     
91 Q9YUR6         100.0%   9.6%      -----------FISTEFRKLRNNILFA--LTDYFTKLILTPE----------NREILEDFAQTQN-----LESITNINLS     
92 Q39432          91.8%  12.3%      ------------VEVHSPFAIGVMIVR--PYVPVNES----------------NIDYYYSSDYPDKIFPTHMERSTKLLS     
93 O62074          98.4%   8.5%      --------------CETCQEASCYSYK--DVPEDELLDDSDD---------EYDEETEHEDDDIDMEHLFTVQKRNTPLA     
94 DPOM_ASCIM      92.0%   9.9%      ------------------------------------------------------TFLFKDD------------WQEEMLA     
95 DPOM_AGABT      95.5%   9.3%      ----------------------LYYLN--NDTELNS------------------GEAIIKK------------MFGDLFD     
   consensus/100%                    ................................................................................     
   consensus/90%                     ........................................................h....................hh.     
   consensus/80%                     .......................h..........t.....................h..ht............pphthh.     
   consensus/70%                     .......................h.......t.hpt....................hh.ht............schphl.     

                     cov    pid  161          .         .         .         2         .         .         .         . 240 
 1 DPOL_RHCM6/1-4 100.0% 100.0%      GFLIFFQRYSP------CFVTGYNINS-----FDFKYILTRLEF---VYKLSPG----------PYSKLPAQ--GRFSMY     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      GFFIFFKAYPP------DILTGYNINL-----FDIKYLLQRMEK---IYHANVS----------EFTKLRFG--GRFSIY     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      GFFIFLSWYSP------EFITGYNING-----FDIKYILTRAEK---LYKMDVG----------QFTKLRRG--GRMFVF     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      GFMLFFQRYAP------AFVTGYNINS-----FDLKYILTRLEY---LYKVDSQ----------RFCKLPTAQGGRFFLH     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      GFFIFFNRFSP------DFLTGYNING-----FDIKYLLHRMCR---VYQKDAG----------RFTKLRRG--GRFFVN     
 6 DPOL_EBV/1-479  96.9%  43.4%      AFFQLIRDLSV------EIVTGYNVAN-----FDWPYILDRARH---IYSINPA----------SLGKIRAG--GVCEVR     
 7 AD49652|AAD496  96.9%  47.0%      GFFIFLRIESP------EFITGYNINN-----FDLKYLCIRMDK---IYHYEIG----------CFSKLKNG---KIGIS     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      AFLTFLKQYSP------EFATGYNIVN-----FDWAYIVNKVTS---VYNIKLD----------GYGKFNKG-----GLF     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      AFFLFLKCKSP------EILTGYNIIN-----FDLKYLCTRMEK---IYNFEIG----------GFSKLKRG---KFSVI     
10 DPOL_HSVSA/1-4  95.9%  41.4%      GFFSLIRDFNV------EIITGYNISN-----FDLPYLIDRATQ---IYNIKLS----------DYSRVKTG--SIFQVH     
11 DPOD_SOYBN/1-4  93.6%  31.0%      AWRDFIREVDP------DIIIGYNICK-----FDLPYLIERALN---LKIAEFP----------ILGRIRNS---RVRVK     
12 DPOD_CANAL/1-4  93.8%  30.3%      HWKEFITKVDP------DVIIGYNTAN-----FDIPYVLNRAKA---LGLNDFP----------FFGRLKRV---KQEIK     
13 DPOL_HSV1K/1-5  97.1%  36.1%      AFMTLVKQYGP------EFVTGYNIIN-----FDWPFLLAKLTD---IYKVPLD----------GYGRMNGR-----GVF     
14 DPOD_YEAST/1-4  93.8%  31.0%      NWRNFIIKVDP------DVIIGYNTTN-----FDIPYLLNRAKA---LKVNDFP----------YFGRLKTV---KQEIK     
15 DPOD_PLAFK/1-4  93.8%  30.8%      AWNEFIIRIDP------DFLTGYNIIN-----FDLPYILNRGTA---LNLKKLK----------FLGRIKNV---ASTVK     
16 DPOD_HUMAN/1-4  93.6%  30.5%      AWSTFIRIMDP------DVITGYNIQN-----FDLPYLISRAQT---LKVQTFP----------FLGRVAGL---CSNIR     
17 AD55134|AAD551  97.1%  37.8%      AFFTFLKQYGP------EFVTGYNIIN-----FDWPFLITKLTD---VYKVPLD----------GYGRANAR-----GVF     
18 AB58156|CAB581  93.8%  31.2%      SWSKFVRDVDP------DVLIGYNICN-----FDIPYLLDRAKS---LRIHNFP----------LLGRIHNF---FSVAK     
19 DPOD_DROME/1-4  94.0%  32.5%      KWSAFVREVDP------DILTGYNINN-----FDFPYLLNRAAH---LKVRNFE----------YLGRIKN---IRSVIK     
20 DPOL_HSVE2/1-4  95.9%  41.4%      LFFTMIRDADV------EFVTGYNISN-----FDFPYVIDRATQ---VYNLNLK----------EFTRVRSS--SIFEVH     
21 DPOL_VZVD/1-52  97.1%  36.6%      AFMTLVKQYAP------EFATGYNIVN-----FDWAFIMEKLNS---IYSLKLD----------GYGSINRG-----GLF     
22 DPOA_HUMAN/1-4  92.2%  19.2%      FFLAKVHKIDP------DIIVGHNIYG-----FELEVLLQRINV---CKAPHWS----------KIGRLKRS---NMPKL     
23 DPOL_CHVP1/1-4  92.8%  26.0%      TWMKILQDEKT------DVSIGYNTWQ-----YDLRYVHGRTQM---CVDDMTGEDKV---KLSNLGRLLSG---GGEVV     
24 DPOL_THEGO/1-4  85.4%  22.3%      RFLKVVKEKDP------DVLITYNGDN-----FDFAYLKKRSEK---LGV-KFI-----------LGREGSE--PKIQRM     
25 DPOA_ORYSA/1-5  91.8%  20.6%      RLMIELSKLDC------DVLVGHNISG-----FDLDVLLHRAQT---CKVPSNMW--------SKIGRLRRS---VMPRL     
26 DPOL_RSIV/1-50  91.3%  22.3%      AFIAYIREHEV------VAVCGYNIMG-----FDIPYIIKRCAR---TSMLGTFK---------RIGWDSHR--LAIEKT     
27 DPOA_YEAST/1-4  92.2%  20.2%      CFCAMLKVEDP------DVIIGHRLQN-----VYLDVLAHRMHD---LNIPTFS----------SIGRRLRR---TWPEK     
28 DPOL_METTH/1-4  84.7%  20.4%      RFAEIVIDKKP------DILVGYNSDN-----FDFPYITRRAAI---LGA-ELD-----------LGWDGSK--IRTMRR     
29 DPOA_SCHPO/1-4  89.9%  17.9%      NFLNKVRTYDP------DVYFGHDFE------MCYSVLLSRLKE---RKIHNWS----------SIGRLRRS---EWPRS     
30 DPOL_ARCFU/1-3  80.4%  21.6%      DFVKLIKSYDP------DIIVGYNQDA-----FDWPYLRKRAE----RWNIPLD-----------VGRDGSN------VV     
31 AA82926|BAA829  95.5%  35.2%      DTYGVLPEVL-------EFVTGYNIVN-----FDWAFIVNKLTT---VYGIRLD----------GYGVINQR--GTFKVW     
32 DPOA_DROME/1-4  87.2%  17.5%      WFLAQYQKIDA------DLIVTFDSMD-----CQLNVITDQIVA---LKIPQWS----------RMGRLRLS-----QSF     
33 AD56202|AAD562  97.3%  37.8%      CFMTFFKQYSP------EFVSGYNILG-----FDWAYLSNKLSK---VYGMRLD----------GYGKANSW--GTFKLQ     
34 DPOL_VARV/1-51  95.5%  14.6%      DLYSFIQKSEK------LDSYKLDSIS-----KNAFSCMGKVLN---RGVREMT----------FIGDDTTD---AKGKA     
35 DPOL_ASFL6/1-4  93.8%  19.4%      SFAEQFSRWAP------DICTGFNDSR-----YDWPFIVEKSMQ---HGILEEVFN------KMSLFWPQKLDTILKCYY     
36 DPOA_LEIDO/1-4  94.0%  20.1%      WLAQQLGKIDA------DMMIGHNFLG-----FTLDILLRRYQE---LSISSWS----------TIGRLDLK---RLPRF     
37 DPOA_OXYNO/1-5  92.0%  19.3%      AFVAKIYQLDP------DLMVAHNLCG-----GMFDLLLARIQM---LKISHWS----------RIGRLKKN--QIPNKK     
38 DPOL_METVO/1-4  83.9%  19.8%      KTIEILKQY--------DVIYTYNGDN-----FDFPYLKKRAN----IYEIELD-----------FDNASNS---QQPQI     
39 DPOL_ORFN2/1-5  95.7%  14.2%      DLYAFIQRTEK------LDSYKLDAIS-----KNAFHCTAVVED---ARPDAVR----------FRGDRSTD---ADGNA     
40 DPOL_NPVOP/1-4  89.1%  18.3%      AFFEFLKTVNP------DVILDYNGDV-----FDLPYIRGRLKG---DKP--------------LLRRYDLP---AMQPN     
41 DPOL_NPVBM/1-4  89.1%  18.6%      AFFDMIKITNP------DVILDFNGDV-----FDLPYILGRLNK---TKM--------------LLKRYDLP---AAAPT     
42 DPOL_FOWPV/1-5  93.4%  13.7%      DLYAFIQKTER------LDSYKLDSIS-----KNIFNCNVAIKE---IDDTILT----------LEATVKDN---SKDKL     
43 DPOL_SULAC/1-4  87.6%  19.1%      RLFEIIREYP--------MLLTFNGDD-----FDIPYIYFRALR---LNFSPEE-----------VPLDVVS---GEGKF     
44 AB55093|CAB550  88.2%  19.3%      LFLAMINEDEP------DMIVGHDLS------ATIALLVSRLEK---LKLPNWS----------RISRLKRS--INIGKI     
45 AB57747|CAB577  87.8%  17.7%      RFFDILLEYP--------IVLTFNGDD-----FDLPYIYFRALK---LGYFPEE-----------IPIDVAG--KDEAKY     
46 DPOA_TRYBB/1-4  93.2%  20.3%      WFAETLAALDP------DIIVGHNIIG-----YTVETLLNRYQE---LNIVRWS----------TIGRLDVR---RFPRI     
47 DPO1_SULOH/1-4  86.4%  18.3%      RFFDIILDYP--------IILTFNGDD-----FDIPYIYYRALK---LNFTPEE-----------IPFDIIN---DEGKY     
48 46|DPO2_AERPE/  82.7%  19.6%      GFVERVKSIDP------DVIVGYNQNR-----FDWPYLVERARV---LGV-KLA-----------VGRRSVE-----PQP     
49 DPOL_BPT4/1-49  88.9%  14.7%      EYINLWEQKRP------AIFTGWNIEG-----FDVPYIMNRVKM---ILG-ERS-----------MKRFSP-----IGRV     
50 DPOL_CBEPV/1-5  95.7%  13.3%      NSYKLGEIAKE------RFNILSKIID-----NGDEYIIMPLDT---ADNKNKVSI------FYDVIRTANYCFINNIPY     
51 DPOL_THELI/1-4  83.1%  16.4%      RFVQVVKEKDP------DVIITYNGDN-----FDLPYLIKRAEK---LGV-RLV-----------LGRDKEHPEPKIQRM     
52 DPOL_NPVLD/1-5  89.9%  17.8%      AFFQLLPLLNA------DVVLDFNGDK-----FDLPFLTGRANK---LCGPAEAAR------ATKIARYDLS-----PVN     
53 DPO3_SULSH/1-3  78.6%  13.1%      KFVDYILNYDP------DIIYVFDVDV-----FHWKYITERANS---LGV-KID-----------IGRKIGS----EVSQ     
54 45|DPO1_AERPE/  86.4%  21.3%      DLVRILQRYP--------LVVSFNGDN-----FDLPYIARRLEV---LGV-PRE----------FAPIELKQDYATFRRS     
55 DPOL_BPR69/1-5  92.4%  17.8%      EYLNFWQQKTP------VILTGWNVES-----FDIPYVYNRIKN---IFGES------------TAKRLSPH---RKTRV     
56 DPO2_SULSO/1-3  76.3%  11.6%      AYYYMRKRLNV------VNETPTVLSQ-----TLYRLGIKPFRR---FRSSDDE-----------FPKVTIA----RVVP     
57 AF07803|AAF078  92.6%  21.2%      YFIETLCKWDP------DVLLGWDIQG-----GSIGFLAERAAQ---LGIRFLN----------NISRTPSP---TTTNN     
58 410720|G410720  92.6%  13.2%      TFLEKIKDLDI------DIYIGYNILN-----FDLEFLIHRCNV---HNLNSYIL--------SRKKKMKKN---EKMKV     
59 DPOL_HSVI1/1-4  91.3%  10.3%      MLLAFINRLRK------SVNVLYVYNAQ----FDIQVIQQRLRY---YAFKQRAPR-------CCKGHDDIPHEWGKALM     
60 AF05246|AAF052  89.7%  16.9%      MFYKMLTLANP------DEVIDYNGDN-----FDLPYLIKRAKI---LCIDSNI-----------IRRYDLP--PTTFRV     
61 DPOZ_YEAST/1-4  89.5%  21.2%      ALTDLVLLLDP------DILSGFEIHN-----FSWGYIIERCQK---IHQFDIVR---------ELARVKCQ--IKTKLS     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      EIANIIKRYDP------DILLGYEIQM-----HSWGYLLQRAAA---LSIDLCR----------MISRVPDD---KIENR     
63 DPOL_BPB03/1-3  76.1%   8.9%      QWVMEIQAD----------LYFHNLK------FDGAFIVNWLEH---HG----------------FKWSNEG----LPNT     
64 DPO2_ECOLI/1-4  79.4%  16.5%      KLNAWFANYDP------DVIIGWNVVQ-----FDLRMLQKHAER---YRLPLR------------LGRDNSE--LEWREH     
65 AB58420|CAB584  88.0%  13.1%      RVRGEILAYDP------DILISWDGIK-----YGLGYLALRYRA---VLQRNLASDLSRVLQHHGYQRTNAN----CGLH     
66 AC19148|AAC191  89.7%  11.6%      RWFEHVQETKP------TIMVTYNGDF-----FDWPFVEARAAV---HGLSMQQ----------EIGFQKDS-------Q     
67 AD46482|AAD464  90.5%  11.7%      RWFEHIQETKP------TIMVTYNGDF-----FDWPFVEARAAI---HGLSMYQ----------EIGFQKDS-------Q     
68 DPOE_YEAST/1-6  88.7%  11.1%      RFFEHIRDVRP------TVISTFNGDF-----FDWPFIHNRSKI---HGLDMFD----------EIGFAPDA-------E     
69 DPOL_BPPZA/1-4  81.0%   7.7%      AWVLKVQAD----------LYFHNLK------FDGAFIINWLERN-------------------GFKWSADG----LPNT     
70 DPO1_KLULA/1-5  79.4%  10.8%      SSVE---------------LIAHNGGG-----YDFHYILSSMYN---PAA---------------IKNILIR-----NNS     
71 Q9YQZ6          92.8%  15.8%      AFLKHIESVT--------VLYAYNVE------FDVRVIAERVSL---YAATGRAELG--RAWQRFLCKDGAATSPQLIFQ     
72 O74719          95.7%   9.3%      ILSSMYKSSDI------KNILIRNNNF-----ISFSFVHDDITF---NIKDSYS----------FLLCSLAN-----AAK     
73 DPOM_NEUCR      92.8%  13.0%      ACIKDMLKYDK------HTVYCHNFSK-----FDINFIIKILVQ---EFVVEKIIS-------KDLDILSIKISYKFEPK     
74 DPOL_BPPRD      83.7%  11.0%      YFRGKLKIVNG------RILEVEHGIHK----FRDSYAILPVPL---AASDEKIEID--------YGKMERET---REQH     
75 Q09038          94.6%   8.5%      DPFLFILTSLD------KAAKAFNVINK--GSFPHSLIKDWPDL---QKIYPHWIKTQR-----KIIEFKHDNKLNIKIN     
76 DPO2_KLULA      94.2%   8.1%      DPYLFILTSLD------KASKAFNVINK--GEFPHSIIHSWEDL---NKILPNWVKIQKR---MIEYKDDNKLNIYYKNI     
77 O78938          96.5%  11.0%      KYLSKLGFIDN-----IIINKGRIITLK--FIYNKYSITFKDSY---LLLPSSLR---------KLCKSFNTQTQKDIFP     
78 O21376          93.4%  10.4%      CLKDMCVKANN------YTFYCHNLSG-----FDSVYIMSALIK---YTRVKGSESD----ITFKIIRREAKVLKMTVRY     
79 O99973          88.5%  11.9%      KIINKSHARN--------IAYFHNLSG-----FDGIYLIPLLIT---IKTIWEG---------AKYIKLIYT----ILTT     
80 P78988          95.7%   9.9%      SLMTSSHLHDL-----KFNVYSNNDGKI-ISLDIVKRIVKQKKT---IKITILDS-----YLLLPFSLKKVAKVFNCNES     
81 O11414         100.0%   9.7%      KSQKLNKTAEP--QFYEIIIVGHNISG-----FDEIVLASHILD---NVKDKDYFVMFN-ITRNFLPRAGKLLFNDITFS     
82 S07183          94.2%   9.4%      RIVKDVQRRGS-----SMVVYFHNLSQ-----FDGIMILSFLTK---SYKNCHIEP---------IMRNDCIYSIKLYKV     
83 Q83895          99.6%   9.2%      NKEKKLKQCEP--RYIELYVVGHNICG-----FDEIILASHVLEG--IDSEELSMFKLTR---SFMPRAGKLLFNDITLS     
84 DPOM_NEUIN      94.4%  10.6%      AFKSIMLRKYD-----GYKVYTHNFSY-----FDGIFIIDILSRL--GEVKPFMRNG-------KILKLTFN--FTLPNS     
85 Q96206          88.7%   8.6%      SFILPWWLRNG------YVHTEEDRTN---TPKEFTTTISGMGQW--YAVDVCIN---------TRGKNKNHVVFYDSLK     
86 DPOM_PODAN      93.8%   9.5%      TIVEDDKKIKV---KKKKPISDVNKKSQNKDHYEISTILRDDRIL--KCVIKVKTPS-------GYNKITFIDSYNILPD     
87 DPOL_ADEB2     100.0%  10.1%      EMHKIKTKGSP--QFIEIYVIGHNICG-----FDEIVLAAQVIHN--RTDVLPAFKIN----RNFMPRNGKILFNDISFC     
88 DPOL_ADE07     100.0%   9.0%      EELKKLPHVRGTPRFLELYIVGHNING-----FDEIVLAAQVINN--RAEVPQPFKITRN----FMPRAGEILFNDVTFA     
89 DPOM_CLAPU      93.4%   8.8%      LLKELLRFN--------LTTEGLNNPY----EFPAPLTRNSDILK--LTIKRTVDG--------KTRKVTIMDSFALLPR     
90 DPOL_ADEB3     100.0%   9.0%      ELCTLELKGQP--TFLEVYVVGHNING-----FDEIVLAAQVINN--KQGIPAAFKVSRN----FMPRCGKILFNDLTFA     
91 Q9YUR6         100.0%   9.6%      EHTNLIMSLKVKPIFIEFYIIGHNIQS-----FDEILLATQILQDENLDITPLFTVERN-----FMPRQGRILFNDITIK     
92 Q39432          91.8%  12.3%      DFIRRIISIIKMN-PEIQTVYFHNFSR-----FDGILILRHLVLHNDEYEIRPLMR---------NGRLYEVVVYFKKRM     
93 O62074          98.4%   8.5%      RFAKFLLEDPRAN---NAYIVAHNGGS-----YDHVMLLAELDRQAGINSQDPKMLVNG----MKIISADFKCGKRKLYF     
94 DPOM_ASCIM      92.0%   9.9%      AFKTLLKSTNHG-----KKFYVHNLAH-----FDSVFILDTLSKLGKIDIIMRDD---------KIMKLKITFKIPGKNT     
95 DPOM_AGABT      95.5%   9.3%      YIAEDRKARNN------YTIYAHNLGR-----FDSVFIIRSLCSEGYKINGQWIDN--------SILYLKIVDSTRKLTI     
   consensus/100%                    .....................................h..........................................     
   consensus/90%                     .hh..h.............hh.hs........hp..hlh..h.......................h.h............     
   consensus/80%                     thhthh.tht........hhhsaNh.t.....ash.hlhtph.....hh................h.p.t..........     
   consensus/70%                     thhphlpphps.......hlhsaNhtt.....FDh.hlhp+hpt...hhh..h............hs+httt......hh     

                     cov    pid  241          :         .         .         .         .         3         .         . 320 
 1 DPOL_RHCM6/1-4 100.0% 100.0%      SPLKKFV-------------------------------------------------------------------------     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      VPVGTKPRNA----------------------------------------------------------------------     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      SPEKGKAGFG----------------------------------------------------------------------     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      SPAVGFKRQYAAAFPSA---------------------------------------------------------------     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      SPDGSGDAFGG---------------------------------------------------------------------     
 6 DPOL_EBV/1-479  96.9%  43.4%      RPHDAGKGF-----------------------------------------------------------------------     
 7 AD49652|AAD496  96.9%  47.0%      VPHEQYKKGF----------------------------------------------------------------------     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      KVWDIATNHFQ---------------------------------------------------------------------     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      VPYEQHKKF-----------------------------------------------------------------------     
10 DPOL_HSVSA/1-4  95.9%  41.4%      TPKDTGNGFM----------------------------------------------------------------------     
11 DPOD_SOYBN/1-4  93.6%  31.0%      DTTFSSRQYG----------------------------------------------------------------------     
12 DPOD_CANAL/1-4  93.8%  30.3%      DAVFSSRAYG----------------------------------------------------------------------     
13 DPOL_HSV1K/1-5  97.1%  36.1%      RVWDIGQSHF----------------------------------------------------------------------     
14 DPOD_YEAST/1-4  93.8%  31.0%      ESVFSSKAYG----------------------------------------------------------------------     
15 DPOD_PLAFK/1-4  93.8%  30.8%      DSSFSSKQFG----------------------------------------------------------------------     
16 DPOD_HUMAN/1-4  93.6%  30.5%      DSSFQSKQTG----------------------------------------------------------------------     
17 AD55134|AAD551  97.1%  37.8%      RVWDIGQNSF----------------------------------------------------------------------     
18 AB58156|CAB581  93.8%  31.2%      ETTFSSKAYG----------------------------------------------------------------------     
19 DPOD_DROME/1-4  94.0%  32.5%      EQMLQSKQMG----------------------------------------------------------------------     
20 DPOL_HSVE2/1-4  95.9%  41.4%      KPKNSSAGFMR---------------------------------------------------------------------     
21 DPOL_VZVD/1-52  97.1%  36.6%      KIWDVGKSGF----------------------------------------------------------------------     
22 DPOA_HUMAN/1-4  92.2%  19.2%      GGRSGFGERN----------------------------------------------------------------------     
23 DPOL_CHVP1/1-4  92.8%  26.0%      ERDLSSNAFG----------------------------------------------------------------------     
24 DPOL_THEGO/1-4  85.4%  22.3%      GDRFAVEVKG----------------------------------------------------------------------     
25 DPOA_ORYSA/1-5  91.8%  20.6%      TKGNTLYGSG----------------------------------------------------------------------     
26 DPOL_RSIV/1-50  91.3%  22.3%      AGVGHAKMTY----------------------------------------------------------------------     
27 DPOA_YEAST/1-4  92.2%  20.2%      FGRGNSNMNH----------------------------------------------------------------------     
28 DPOL_METTH/1-4  84.7%  20.4%      GFANATAIKG----------------------------------------------------------------------     
29 DPOA_SCHPO/1-4  89.9%  17.9%      FNRSSQQFVE----------------------------------------------------------------------     
30 DPOL_ARCFU/1-3  80.4%  21.6%      FRGGRPKITG----------------------------------------------------------------------     
31 AA82926|BAA829  95.5%  35.2%      --DAGANAFQ----------------------------------------------------------------------     
32 DPOA_DROME/1-4  87.2%  17.5%      GKRLLEHFVG----------------------------------------------------------------------     
33 AD56202|AAD562  97.3%  37.8%      DPSARGLGRF----------------------------------------------------------------------     
34 DPOL_VARV/1-51  95.5%  14.6%      AVFAKVLTTG----------------------------------------------------------------------     
35 DPOL_ASFL6/1-4  93.8%  19.4%      VKEKRVKISAEK--------------------------------------------------------------------     
36 DPOA_LEIDO/1-4  94.0%  20.1%      QGTATNVNQE----------------------------------------------------------------------     
37 DPOA_OXYNO/1-5  92.0%  19.3%      SDQSGANYGGS---------------------------------------------------------------------     
38 DPOL_METVO/1-4  83.9%  19.8%      IKISKGGINR----------------------------------------------------------------------     
39 DPOL_ORFN2/1-5  95.7%  14.2%      AVFARVLSTG----------------------------------------------------------------------     
40 DPOL_NPVOP/1-4  89.1%  18.3%      TKLFITKIGN----------------------------------------------------------------------     
41 DPOL_NPVBM/1-4  89.1%  18.6%      TKLFINKLGN----------------------------------------------------------------------     
42 DPOL_FOWPV/1-5  93.4%  13.7%      SIFSRVLETG----------------------------------------------------------------------     
43 DPOL_SULAC/1-4  87.6%  19.1%      LAGIHIDLYK----------------------------------------------------------------------     
44 AB55093|CAB550  88.2%  19.3%      ---GHSKSGQ----------------------------------------------------------------------     
45 AB57747|CAB577  87.8%  17.7%      LAGLHIDLYK----------------------------------------------------------------------     
46 DPOA_TRYBB/1-4  93.2%  20.3%      ----QGNNFN----------------------------------------------------------------------     
47 DPO1_SULOH/1-4  86.4%  18.3%      LAGIHIDLYK----------------------------------------------------------------------     
48 46|DPO2_AERPE/  82.7%  19.6%      GLYGHYSVSG----------------------------------------------------------------------     
49 DPOL_BPT4/1-49  88.9%  14.7%      KSKLIQNMYG----------------------------------------------------------------------     
50 DPOL_CBEPV/1-5  95.7%  13.3%      KIKDKTKIIN----------------------------------------------------------------------     
51 DPOL_THELI/1-4  83.1%  16.4%      GDSFAVEIKG----------------------------------------------------------------------     
52 DPOL_NPVLD/1-5  89.9%  17.8%      VVTQQSYDKF----------------------------------------------------------------------     
53 DPO3_SULSH/1-3  78.6%  13.1%      GTYGHYSISG----------------------------------------------------------------------     
54 45|DPO1_AERPE/  86.4%  21.3%      LHIDLHKLFG----------------------------------------------------------------------     
55 DPOL_BPR69/1-5  92.4%  17.8%      --KVIENMYG----------------------------------------------------------------------     
56 DPO2_SULSO/1-3  76.3%  11.6%      LDWYGESLKG----------------------------------------------------------------------     
57 AF07803|AAF078  92.6%  21.2%      SDNKRKLGNNLLPDPLVANPA-----------------------------------------------------------     
58 410720|G410720  92.6%  13.2%      NKFNGTNSTG----------------------------------------------------------------------     
59 DPOL_HSVI1/1-4  91.3%  10.3%      EKWEAFLSVKP---------------------------------------------------------------------     
60 AF05246|AAF052  89.7%  16.9%      YKINTKFGYG----------------------------------------------------------------------     
61 DPOZ_YEAST/1-4  89.5%  21.2%      DTWGYAHSSG----------------------------------------------------------------------     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      FAAERDE-YG----------------------------------------------------------------------     
63 DPOL_BPB03/1-3  76.1%   8.9%      YNTIISKMGQ----------------------------------------------------------------------     
64 DPO2_ECOLI/1-4  79.4%  16.5%      GFKNGVFFAQAK--------------------------------------------------------------------     
65 AB58420|CAB584  88.0%  13.1%      SAAAASASGGDAGVDSGAAERAFPSVAEEGPTKSGRGGAEAGELAAARYRSRSLASHAAAPFTVRHGSSGGGGEPLPSQE     
66 AC19148|AAC191  89.7%  11.6%      GEYKAPQ-------------------------------------------------------------------------     
67 AD46482|AAD464  90.5%  11.7%      GEYKAPQ-------------------------------------------------------------------------     
68 DPOE_YEAST/1-6  88.7%  11.1%      GEYKSSY-------------------------------------------------------------------------     
69 DPOL_BPPZA/1-4  81.0%   7.7%      YNTIISRMGQ----------------------------------------------------------------------     
70 DPO1_KLULA/1-5  79.4%  10.8%      FISFNFAHDG----------------------------------------------------------------------     
71 Q9YQZ6          92.8%  15.8%      SDTLLSEYRELIHVARTTIAREHDVG------------------------------------------------------     
72 O74719          95.7%   9.3%      AFLSGNHDFG----------------------------------------------------------------------     
73 DPOM_NEUCR      92.8%  13.0%      KKGGKAERHT----------------------------------------------------------------------     
74 DPOL_BPPRD      83.7%  11.0%      KAEILEYLKG----------------------------------------------------------------------     
75 Q09038          94.6%   8.5%      TTLEEDNITN----------------------------------------------------------------------     
76 DPO2_KLULA      94.2%   8.1%      EIFENDRNYN----------------------------------------------------------------------     
77 O78938          96.5%  11.0%      YLLDDINYIG----------------------------------------------------------------------     
78 O21376          93.4%  10.4%      MDESGKESQMVMLDSLTVLN------------------------------------------------------------     
79 O99973          88.5%  11.9%      HILSLRDSLN----------------------------------------------------------------------     
80 P78988          95.7%   9.9%      KGLFPYKFIRED--------------------------------------------------------------------     
81 O11414         100.0%   9.7%      LPNPQYKKPSRGTFDRWQNG------------------------------------------------------------     
82 S07183          94.2%   9.4%      SKNGDKRLVLT---------------------------------------------------------------------     
83 Q83895          99.6%   9.2%      LPNPCFKKPSHTTYERWKNG------------------------------------------------------------     
84 DPOM_NEUIN      94.4%  10.6%      KRKYTLYFMD----------------------------------------------------------------------     
85 Q96206          88.7%   8.6%      KLPFKVEQIAKG--------------------------------------------------------------------     
86 DPOM_PODAN      93.8%   9.5%      KLDNLAKSFG----------------------------------------------------------------------     
87 DPOL_ADEB2     100.0%  10.1%      LPNPKYEKRKDFADWECG--------------------------------------------------------------     
88 DPOL_ADE07     100.0%   9.0%      LPNPAYKKRADFQLWEQG--------------------------------------------------------------     
89 DPOM_CLAPU      93.4%   8.8%      SLRDLCKDYN----------------------------------------------------------------------     
90 DPOL_ADEB3     100.0%   9.0%      LPNPTHAARKDFKDWEEG--------------------------------------------------------------     
91 Q9YUR6         100.0%   9.6%      FPNPDYYVAKEEKKNNKSEILSQIKEG-----------------------------------------------------     
92 Q39432          91.8%  12.3%      LFRFRDSLNLLP--------------------------------------------------------------------     
93 O62074          98.4%   8.5%      RDSLQYLQMGLAKMPGAFGLTGEAKG------------------------------------------------------     
94 DPOM_ASCIM      92.0%   9.9%      EYSISFLDSLLMLP------------------------------------------------------------------     
95 DPOM_AGABT      95.5%   9.3%      KLRDSIKLVP----------------------------------------------------------------------     
   consensus/100%                    ................................................................................     
   consensus/90%                     ................................................................................     
   consensus/80%                     ....t.t.........................................................................     
   consensus/70%                     ..h.t.p.ht......................................................................     

                     cov    pid  321          .         .         :         .         .         .         .         4 400 
 1 DPOL_RHCM6/1-4 100.0% 100.0%      --------------------------------------------------------------------------------     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      --------------------------------------------------------------------------------     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      --------------------------------------------------------------------------------     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      --------------------------------------------------------------------------------     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      --------------------------------------------------------------------------------     
 6 DPOL_EBV/1-479  96.9%  43.4%      --------------------------------------------------------------------------------     
 7 AD49652|AAD496  96.9%  47.0%      --------------------------------------------------------------------------------     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      --------------------------------------------------------------------------------     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      --------------------------------------------------------------------------------     
10 DPOL_HSVSA/1-4  95.9%  41.4%      --------------------------------------------------------------------------------     
11 DPOD_SOYBN/1-4  93.6%  31.0%      --------------------------------------------------------------------------------     
12 DPOD_CANAL/1-4  93.8%  30.3%      --------------------------------------------------------------------------------     
13 DPOL_HSV1K/1-5  97.1%  36.1%      --------------------------------------------------------------------------------     
14 DPOD_YEAST/1-4  93.8%  31.0%      --------------------------------------------------------------------------------     
15 DPOD_PLAFK/1-4  93.8%  30.8%      --------------------------------------------------------------------------------     
16 DPOD_HUMAN/1-4  93.6%  30.5%      --------------------------------------------------------------------------------     
17 AD55134|AAD551  97.1%  37.8%      --------------------------------------------------------------------------------     
18 AB58156|CAB581  93.8%  31.2%      --------------------------------------------------------------------------------     
19 DPOD_DROME/1-4  94.0%  32.5%      --------------------------------------------------------------------------------     
20 DPOL_HSVE2/1-4  95.9%  41.4%      --------------------------------------------------------------------------------     
21 DPOL_VZVD/1-52  97.1%  36.6%      --------------------------------------------------------------------------------     
22 DPOA_HUMAN/1-4  92.2%  19.2%      --------------------------------------------------------------------------------     
23 DPOL_CHVP1/1-4  92.8%  26.0%      --------------------------------------------------------------------------------     
24 DPOL_THEGO/1-4  85.4%  22.3%      --------------------------------------------------------------------------------     
25 DPOA_ORYSA/1-5  91.8%  20.6%      --------------------------------------------------------------------------------     
26 DPOL_RSIV/1-50  91.3%  22.3%      --------------------------------------------------------------------------------     
27 DPOA_YEAST/1-4  92.2%  20.2%      --------------------------------------------------------------------------------     
28 DPOL_METTH/1-4  84.7%  20.4%      --------------------------------------------------------------------------------     
29 DPOA_SCHPO/1-4  89.9%  17.9%      --------------------------------------------------------------------------------     
30 DPOL_ARCFU/1-3  80.4%  21.6%      --------------------------------------------------------------------------------     
31 AA82926|BAA829  95.5%  35.2%      --------------------------------------------------------------------------------     
32 DPOA_DROME/1-4  87.2%  17.5%      --------------------------------------------------------------------------------     
33 AD56202|AAD562  97.3%  37.8%      --------------------------------------------------------------------------------     
34 DPOL_VARV/1-51  95.5%  14.6%      --------------------------------------------------------------------------------     
35 DPOL_ASFL6/1-4  93.8%  19.4%      --------------------------------------------------------------------------------     
36 DPOA_LEIDO/1-4  94.0%  20.1%      --------------------------------------------------------------------------------     
37 DPOA_OXYNO/1-5  92.0%  19.3%      --------------------------------------------------------------------------------     
38 DPOL_METVO/1-4  83.9%  19.8%      --------------------------------------------------------------------------------     
39 DPOL_ORFN2/1-5  95.7%  14.2%      --------------------------------------------------------------------------------     
40 DPOL_NPVOP/1-4  89.1%  18.3%      --------------------------------------------------------------------------------     
41 DPOL_NPVBM/1-4  89.1%  18.6%      --------------------------------------------------------------------------------     
42 DPOL_FOWPV/1-5  93.4%  13.7%      --------------------------------------------------------------------------------     
43 DPOL_SULAC/1-4  87.6%  19.1%      --------------------------------------------------------------------------------     
44 AB55093|CAB550  88.2%  19.3%      --------------------------------------------------------------------------------     
45 AB57747|CAB577  87.8%  17.7%      --------------------------------------------------------------------------------     
46 DPOA_TRYBB/1-4  93.2%  20.3%      --------------------------------------------------------------------------------     
47 DPO1_SULOH/1-4  86.4%  18.3%      --------------------------------------------------------------------------------     
48 46|DPO2_AERPE/  82.7%  19.6%      --------------------------------------------------------------------------------     
49 DPOL_BPT4/1-49  88.9%  14.7%      --------------------------------------------------------------------------------     
50 DPOL_CBEPV/1-5  95.7%  13.3%      --------------------------------------------------------------------------------     
51 DPOL_THELI/1-4  83.1%  16.4%      --------------------------------------------------------------------------------     
52 DPOL_NPVLD/1-5  89.9%  17.8%      --------------------------------------------------------------------------------     
53 DPO3_SULSH/1-3  78.6%  13.1%      --------------------------------------------------------------------------------     
54 45|DPO1_AERPE/  86.4%  21.3%      --------------------------------------------------------------------------------     
55 DPOL_BPR69/1-5  92.4%  17.8%      --------------------------------------------------------------------------------     
56 DPO2_SULSO/1-3  76.3%  11.6%      --------------------------------------------------------------------------------     
57 AF07803|AAF078  92.6%  21.2%      --------------------------------------------------------------------------------     
58 410720|G410720  92.6%  13.2%      --------------------------------------------------------------------------------     
59 DPOL_HSVI1/1-4  91.3%  10.3%      --------------------------------------------------------------------------------     
60 AF05246|AAF052  89.7%  16.9%      --------------------------------------------------------------------------------     
61 DPOZ_YEAST/1-4  89.5%  21.2%      --------------------------------------------------------------------------------     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      --------------------------------------------------------------------------------     
63 DPOL_BPB03/1-3  76.1%   8.9%      --------------------------------------------------------------------------------     
64 DPO2_ECOLI/1-4  79.4%  16.5%      --------------------------------------------------------------------------------     
65 AB58420|CAB584  88.0%  13.1%      SVQSATAMAARSSVLSSAASSASWTAPLRDLDEGDDGVDGGGTDDVGTKGGACGRRGGALAGQTVEYREGGTMRWAHTGL     
66 AC19148|AAC191  89.7%  11.6%      --------------------------------------------------------------------------------     
67 AD46482|AAD464  90.5%  11.7%      --------------------------------------------------------------------------------     
68 DPOE_YEAST/1-6  88.7%  11.1%      --------------------------------------------------------------------------------     
69 DPOL_BPPZA/1-4  81.0%   7.7%      --------------------------------------------------------------------------------     
70 DPO1_KLULA/1-5  79.4%  10.8%      --------------------------------------------------------------------------------     
71 Q9YQZ6          92.8%  15.8%      --------------------------------------------------------------------------------     
72 O74719          95.7%   9.3%      --------------------------------------------------------------------------------     
73 DPOM_NEUCR      92.8%  13.0%      --------------------------------------------------------------------------------     
74 DPOL_BPPRD      83.7%  11.0%      --------------------------------------------------------------------------------     
75 Q09038          94.6%   8.5%      --------------------------------------------------------------------------------     
76 DPO2_KLULA      94.2%   8.1%      --------------------------------------------------------------------------------     
77 O78938          96.5%  11.0%      --------------------------------------------------------------------------------     
78 O21376          93.4%  10.4%      --------------------------------------------------------------------------------     
79 O99973          88.5%  11.9%      --------------------------------------------------------------------------------     
80 P78988          95.7%   9.9%      --------------------------------------------------------------------------------     
81 O11414         100.0%   9.7%      --------------------------------------------------------------------------------     
82 S07183          94.2%   9.4%      --------------------------------------------------------------------------------     
83 Q83895          99.6%   9.2%      --------------------------------------------------------------------------------     
84 DPOM_NEUIN      94.4%  10.6%      --------------------------------------------------------------------------------     
85 Q96206          88.7%   8.6%      --------------------------------------------------------------------------------     
86 DPOM_PODAN      93.8%   9.5%      --------------------------------------------------------------------------------     
87 DPOL_ADEB2     100.0%  10.1%      --------------------------------------------------------------------------------     
88 DPOL_ADE07     100.0%   9.0%      --------------------------------------------------------------------------------     
89 DPOM_CLAPU      93.4%   8.8%      --------------------------------------------------------------------------------     
90 DPOL_ADEB3     100.0%   9.0%      --------------------------------------------------------------------------------     
91 Q9YUR6         100.0%   9.6%      --------------------------------------------------------------------------------     
92 Q39432          91.8%  12.3%      --------------------------------------------------------------------------------     
93 O62074          98.4%   8.5%      --------------------------------------------------------------------------------     
94 DPOM_ASCIM      92.0%   9.9%      --------------------------------------------------------------------------------     
95 DPOM_AGABT      95.5%   9.3%      --------------------------------------------------------------------------------     
   consensus/100%                    ................................................................................     
   consensus/90%                     ................................................................................     
   consensus/80%                     ................................................................................     
   consensus/70%                     ................................................................................     

                     cov    pid  401          .         .         .         .         :         .         .         . 480 
 1 DPOL_RHCM6/1-4 100.0% 100.0%      --------------------------------------------TTTTTKVFISGTVVIDMYPVCMAKTS---SPNYKLN     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      --------------------------------------------SSASIKVHCTGTVVLDMYPVCVAKTS---APNYKLE     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      --------------------------------------------TSNTVKVFWSGTVVLDMYPVCTAKAS---SPNYKLD     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      --------------------------------------SHNNPASTAATKVYIAGSVVIDMYPVCMAKTN---SPNYKLN     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      --------------------------------------------RSGVIKVFCAGTVVLDMYPVCSAKTS---APNYKLD     
 6 DPOL_EBV/1-479  96.9%  43.4%      --------------------------------------------LRANTKVRITGLIPIDMYAVCRDKLS---LSDYKLD     
 7 AD49652|AAD496  96.9%  47.0%      --------------------------------------------LQAQTKVFTSGVLYLDMYPVYSSKIT---AQNYKLD     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      ----------------------------------------------KKSKVKINGLISLDMYSVATEKLK---LPSYKLD     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      --------------------------------------------LNSLTKVNMSGILCFDMYNVYSSKIS---AQNYKLD     
10 DPOL_HSVSA/1-4  95.9%  41.4%      ---------------------------------------------RSVSKIKISGIIAIDMYIVCKDKLS---LSNYKLD     
11 DPOD_SOYBN/1-4  93.6%  31.0%      --------------------------------------------TRESKEVAVEGRVTFDLLQVMQRDYK---LSSYSLN     
12 DPOD_CANAL/1-4  93.8%  30.3%      --------------------------------------------TRENKVVNIDGRMQLDLLQFIQREYK---LRSYTLN     
13 DPOL_HSV1K/1-5  97.1%  36.1%      ---------------------------------------------QKRSKIKVNGMVNIDMYGIITDKIK---LSSYKLN     
14 DPOD_YEAST/1-4  93.8%  31.0%      --------------------------------------------TRETKNVNIDGRLQLDLLQFIQREYK---LRSYTLN     
15 DPOD_PLAFK/1-4  93.8%  30.8%      --------------------------------------------THETKEINIFGRIQFDVYDLIKRDYK---LKSYTLN     
16 DPOD_HUMAN/1-4  93.6%  30.5%      --------------------------------------------RRDTKVVSMVGRVQMDMLQVLLREYK---LRSHTLN     
17 AD55134|AAD551  97.1%  37.8%      ---------------------------------------------QKNNKIKINGVVNIDMYAIAREKVK---LSSYKLN     
18 AB58156|CAB581  93.8%  31.2%      --------------------------------------------TRESKTTSIPGRLQLDMLQVMQRDFK---LRSYSLN     
19 DPOD_DROME/1-4  94.0%  32.5%      --------------------------------------------RRENQYVNFEGRVPFDLLFVLLRDYK---LRSYTLN     
20 DPOL_HSVE2/1-4  95.9%  41.4%      ----------------------------------------------AVSKVKVAGVVPIDMYQVCRDKLS---LSNYKLD     
21 DPOL_VZVD/1-52  97.1%  36.6%      ---------------------------------------------QRRSKVKINGLISLDMYAIATEKLK---LSSYKLD     
22 DPOA_HUMAN/1-4  92.2%  19.2%      ---------------------------------------------------ATCGRMICDVEISAKELIR---CKSYHLS     
23 DPOL_CHVP1/1-4  92.8%  26.0%      --------------------------------------------QNKFFLLDMPGVMQIDLLQWFRKNRN---LESYSLN     
24 DPOL_THEGO/1-4  85.4%  22.3%      -------------------------------------------------------RIHFDLYPVIRRTIN---LPTYTLE     
25 DPOA_ORYSA/1-5  91.8%  20.6%      --------------------------------------------ASPGIMSCIAGRLLCDTYLCSRDLLK---EVSYSLT     
26 DPOL_RSIV/1-50  91.3%  22.3%      --------------------------------------------------IQWEGVLTIDLMPIIMMDHK---LDSYSLD     
27 DPOA_YEAST/1-4  92.2%  20.2%      ----------------------------------------------FFISDICSGRLICDIANEMGQSLT-PKCQSWDLS     
28 DPOL_METTH/1-4  84.7%  20.4%      -------------------------------------------------------TVHVDLYPVMRRYMN---LDRYTLE     
29 DPOA_SCHPO/1-4  89.9%  17.9%      -------------------------------------------------KQIIAGRLMCDLSNDFGRSMI--KAQSWSLS     
30 DPOL_ARCFU/1-3  80.4%  21.6%      -------------------------------------------------------RLNVDLYDIAMRISD---IKIKKLE     
31 AA82926|BAA829  95.5%  35.2%      ----------------------------------------------KKGKFKATGIIALDMYCIATEKLK---LQSYKLD     
32 DPOA_DROME/1-4  87.2%  17.5%      -------------------------------------------------------RMVCDVKRSAEECIR---ARSYDLQ     
33 AD56202|AAD562  97.3%  37.8%      ----------------------------------------------KKVKIN--GVVNIDMFTISYEKLK---LPSYKLN     
34 DPOL_VARV/1-51  95.5%  14.6%      ----------------------------------------------NYVTVDD-IICKVIHKDIWENGFK-VVLSCPTLT     
35 DPOL_ASFL6/1-4  93.8%  19.4%      --------------------------------------------SIISSFLHTPGCLPIDVRNMCMQLYP--KAEKTSLK     
36 DPOA_LEIDO/1-4  94.0%  20.1%      -------------------------------------------------KETCIGRLVVDSYSLSREHYKTVNYRLLSLA     
37 DPOA_OXYNO/1-5  92.0%  19.3%      ---------------------------------------------QWIPRQVTCGRLLVDTFLTAKELIR---ETNYDLT     
38 DPOL_METVO/1-4  83.9%  19.8%      -------------------------------------------------KSKIPGIIHIDLYPIARKLLN---LTKYKLE     
39 DPOL_ORFN2/1-5  95.7%  14.2%      -----------------------------------------------NYVTVDERVCRVLHKRVDEDGFTVDLADPAARA     
40 DPOL_NPVOP/1-4  89.1%  18.3%      ----------------------------------------------RTDTYYFNYYIHIDLYKYFGVDANKRDVENFQLN     
41 DPOL_NPVBM/1-4  89.1%  18.6%      ----------------------------------------------KVDTYYFNYYIHIDLYKFFSSDSNQHKVENFQLN     
42 DPOL_FOWPV/1-5  93.4%  13.7%      ----------------------------------------------NYITIGDNNVSKIVYKDINQDSFIIKVISNRDYE     
43 DPOL_SULAC/1-4  87.6%  19.1%      -------------------------------------------------------FFFNRAVSIYAFE---GKYSEYSLY     
44 AB55093|CAB550  88.2%  19.3%      -------------------------------------------------WELTAGRMMLDSKLAAMELVK---SRSFDLT     
45 AB57747|CAB577  87.8%  17.7%      -------------------------------------------------------FFFNKAVRNYAFE---GKYNEYNLD     
46 DPOA_TRYBB/1-4  93.2%  20.3%      ---------------------------------------------LAIEKEACVGRLVVDTYLLAREYYKSTNYKLLSLS     
47 DPO1_SULOH/1-4  86.4%  18.3%      -------------------------------------------------------FFFNRAIRNYAFE---GKYNEYNLD     
48 46|DPO2_AERPE/  82.7%  19.6%      -------------------------------------------------------RLNVDLLDFAEELHE-VKVKTLEEV     
49 DPOL_BPT4/1-49  88.9%  14.7%      ----------------------------------------------SKEIYSIDGVSILDYLDLYKKFAF-TNLPSFSLE     
50 DPOL_CBEPV/1-5  95.7%  13.3%      ----------------------------------------------DKEKLYDPISIENSLYQQFKIYKN----NTPISD     
51 DPOL_THELI/1-4  83.1%  16.4%      -------------------------------------------------------RIHFDLFPVVRRTIN---LPTYTLE     
52 DPOL_NPVLD/1-5  89.9%  17.8%      --------------------------------------------SNKLHSHYLTYYIHIDLYQFLSTDSEHNDLENFQLN     
53 DPO3_SULSH/1-3  78.6%  13.1%      -------------------------------------------------------RLNVDLVGLLMNERL---TGHIDLI     
54 45|DPO1_AERPE/  86.4%  21.3%      ----------------------------------------------------------IRALQVYA--FG-NKYRELSLE     
55 DPOL_BPR69/1-5  92.4%  17.8%      ----------------------------------------------SREIITLFGISVLDYIDLYKKFSF-TNQPSYSLD     
56 DPO2_SULSO/1-3  76.3%  11.6%      ------------------------------------------------------KVFEVKINNEVRRFYE-----KPEVE     
57 AF07803|AAF078  92.6%  21.2%      --------------------------------QVEEVVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVK---LNMYTIE     
58 410720|G410720  92.6%  13.2%      --------------------------------------------SMYNIIQNIKGRLIVDIYLLCKDSIK---LTTYCLD     
59 DPOL_HSVI1/1-4  91.3%  10.3%      -------------------------------------------QLFKAQILMGQDILKANYLKLLEGIGS---VLAQAKS     
60 AF05246|AAF052  89.7%  16.9%      -----------------------------------------------FNSHSMVYYNHVDLYQYIKNTLDASKMENMKLD     
61 DPOZ_YEAST/1-4  89.5%  21.2%      --------------------------------------------------IMITGRHMINIWRALRSDVN---LTQYTIE     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      --------------------------------------------SYTMSEINIVGRITLNLWRIMRNEVA---LTNYTFE     
63 DPOL_BPB03/1-3  76.1%   8.9%      -------------------------------------------------------WYMIDICFGYKGKRK---LHTVIYD     
64 DPO2_ECOLI/1-4  79.4%  16.5%      ------------------------------------------------------GRLIIDGIEALKSAFW--NFSSFSLE     
65 AB58420|CAB584  88.0%  13.1%      QRNGQSPLLARPRAAVDLRAA-----ASASALPAPAAAAADHYAKRFGTNMHVVGRICTSLGRDLRKEIK---MPSYSLS     
66 AC19148|AAC191  89.7%  11.6%      -------------------------------------------------------CIHMDCLRWVKRDSY-LPVGSHNLK     
67 AD46482|AAD464  90.5%  11.7%      -------------------------------------------------------CIHMDCLRWVKRDSY-LPVGSHNLK     
68 DPOE_YEAST/1-6  88.7%  11.1%      -------------------------------------------------------CSHMDCFRWVKRDSY-LPQGSQGLK     
69 DPOL_BPPZA/1-4  81.0%   7.7%      -------------------------------------------------------WYMIDICLGYKGKRK---IHTVIYD     
70 DPO1_KLULA/1-5  79.4%  10.8%      --------------------------------------------------------VKFSVKDSYSFL-----LCSLANA     
71 Q9YQZ6          92.8%  15.8%      --------------------------RRTAACRAANKIFMEKRDKMQTFRLVGFHAHIIDLYRLCHTQPITNACKDRKLD     
72 O74719          95.7%   9.3%      ----------------------------------------------KTDFPHHDVRSKADLEKVYRKWRSIDN-------     
73 DPOM_NEUCR      92.8%  13.0%      ---------------------------------------------ITIADSCRLLPGSLDKLAKDHNIITKKGKFPYKFV     
74 DPOL_BPPRD      83.7%  11.0%      -----------------------------------------------------DCVTLHKMVSLFIAEFG----MRLTIG     
75 Q09038          94.6%   8.5%      ---------------------------------------------NSTIIEKAIEYCSIDVIAMKQVWQKFKKLVKENLQ     
76 DPO2_KLULA      94.2%   8.1%      -----------------------------------------------TILENAIEYCKVDVLAMEKVWIKFKKLLEKNLN     
77 O78938          96.5%  11.0%      ----------------------------------------------EVPDYKYFCNLEMEEYNNYKSNFK---VWNFREE     
78 O21376          93.4%  10.4%      --------------------------------------ASLRKTSPLFELEHQKGYLPYDWVSTNTNYMG---PIPQSFN     
79 O99973          88.5%  11.9%      ----------------------------------------------------LLPMSLNDLGKSFINRSKLDINPIFTLE     
80 P78988          95.7%   9.9%      --------------------------------------------NINYKGVIPEIKYFTDLSIKDYNKYSEDLKGIWDCK     
81 O11414         100.0%   9.7%      ------------------------------------------MLDKQDLKWQGVKFMVRDTYLLTHTSLR-NAATAYQLP     
82 S07183          94.2%   9.4%      ----------------------------------------------FMDSYLLLKVKLADLADSFCPELG--GKGSFDHQ     
83 Q83895          99.6%   9.2%      ------------------------------------------IINFEDMKWQGIKFMVRDTFLLTHSSLR-DAATAYQLS     
84 DPOM_NEUIN      94.4%  10.6%      --------------------------------------------S-----LLILPDSLDKLSNFFNNKVKKLFFPHSFLD     
85 Q96206          88.7%   8.6%      -----------------------------------------------FGLPVLKGDIDYKKYRPVGYVMDDNEIEYLKHD     
86 DPOM_PODAN      93.8%   9.5%      --------------------------------------------TEIQKGLFPYEFVKSNTLNYVGITPS---IEYYKIN     
87 DPOL_ADEB2     100.0%  10.1%      ------------------------------------------KLTAADHKYQFVKFMVRDTFALTHTSLR-NAAGAYELP     
88 DPOL_ADE07     100.0%   9.0%      ------------------------------------------ACDDIDFKYQFLKVMVRDTFALTHTSLR-NAAQAYSLP     
89 DPOM_CLAPU      93.4%   8.8%      ---------------------------------------------IDNPKSYFPYLFSVDSHLFYTGATP---NINYYLD     
90 DPOL_ADEB3     100.0%   9.0%      ------------------------------------------TPTSADYKFQFVKFMVRDTFALTHTSLR-NAAAAYALP     
91 Q9YUR6         100.0%   9.6%      ------------------------------------------IPHPESIKNLYIKSMVRDTFQITHTSLK-EAAKAYNLK     
92 Q39432          91.8%  12.3%      ----------------------------------------------G-SLDYLSSNLCPELGNKGSFDHSSMNLENVKKK     
93 O62074          98.4%   8.5%      ---------------------------FFPHLYNHPQNYDKILPTLPPREYYAPKFMNSDTVLEFEKWYTENYNNGFKLH     
94 DPOM_ASCIM      92.0%   9.9%      ----------------------------------------------NSLDNLSKAFNIENKKSVFPLKFTNGAVTPFNYI     
95 DPOM_AGABT      95.5%   9.3%      ---------------------------------------------HSLDKALSSNGCNISKGMFPHKFVN---KDTLNYI     
   consensus/100%                    ................................................................................     
   consensus/90%                     ...........................................................phh..............hth.     
   consensus/80%                     .......................................................hh.hchh.hhtt.ht...h.thplp     
   consensus/70%                     ......................................................hhh.hDhhthhppthp...htsapLp     

                     cov    pid  481          .         5         .         .         .         .         :         . 560 
 1 DPOL_RHCM6/1-4 100.0% 100.0%      T---------MAELYLK----------------QQKEDMSYK---DIPVKFIS-----------GCEGRAQVGKYCVQDA     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      T---------MAEMYLN----------------EHKDDLSYK---EIPPTFLA-----------NDNGRAVVGRYCIKDA     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      T---------MAEIYLK----------------KKKDDLSYK---EIPVQFSA-----------GDEGRAPGGKYCLQDA     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      T---------MAELYLR----------------QRKDDLSYK---DIPRCFVA-----------NAEGRAQVGRYCLQDA     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      T---------MAERYLG----------------QRKEDLSYK---EIPVAFLG-----------GEEGRARVGKYCVQDG     
 6 DPOL_EBV/1-479  96.9%  43.4%      T---------VARHLLG----------------AKKEDVHYK---EIPRLFAA-----------GPEGRRRLGMYCVQDS     
 7 AD49652|AAD496  96.9%  47.0%      T---------IAKICLQ----------------QEKEQLSYK---EIPKKFIS-----------GPSGRAVVGKYCLQDS     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      A---------VVGDVLG----------------EHKIDLPYK---EIPSYYAG-----------GPDRRGVIGEYCIQDS     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      T---------IAKLCLN----------------QEKENLSYK---EIPKKFID-----------GSKGRAVVGRYCIQDS     
10 DPOL_HSVSA/1-4  95.9%  41.4%      T---------VANHCIG----------------AKKEDVSYK---DIMPLFMS-----------GPEGRAKIGLYCVIDS     
11 DPOD_SOYBN/1-4  93.6%  31.0%      S---------VSSHFLS----------------EQKEDVHHS---IISDLQNG-----------NAETRRRLAVYCLKDA     
12 DPOD_CANAL/1-4  93.8%  30.3%      S---------VSAHFLG----------------EQKEDVQHS---IITDLQNG-----------TKETRRRLAVYCLKDA     
13 DPOL_HSV1K/1-5  97.1%  36.1%      A---------VAEAVLK----------------DKKKDLSYR---DIPAYYAT-----------GPAQRGVIGEYCIQDS     
14 DPOD_YEAST/1-4  93.8%  31.0%      A---------VSAHFLG----------------EQKEDVHYS---IISDLQNG-----------DSETRRRLAVYCLKDA     
15 DPOD_PLAFK/1-4  93.8%  30.8%      Y---------VSFEFLK----------------EQKEDVHYS---IMNDLQNE-----------SPESRKRIATYCIKDG     
16 DPOD_HUMAN/1-4  93.6%  30.5%      A---------VSFHFLG----------------EQKEDVQHS---IITDLQNG-----------NDQTRRRLAVYCLKDA     
17 AD55134|AAD551  97.1%  37.8%      A---------VAEAVLD----------------DRKKDLDYK---DIPRYYAS-----------GPELRGVIGEYCIQDS     
18 AB58156|CAB581  93.8%  31.2%      A---------VCSQFLG----------------EQKEDVHYS---IITDLQNG-----------TADSRRRLAIYCLKDA     
19 DPOD_DROME/1-4  94.0%  32.5%      A---------VSYHFLQ----------------EQKEDVHHS---IITDLQNG-----------DEQTRRRSAMYCLKDA     
20 DPOL_HSVE2/1-4  95.9%  41.4%      T---------VAGECVG----------------AKKEDVSYK---EIPHLFRQ-----------GPGGRARLGLYCVKDS     
21 DPOL_VZVD/1-52  97.1%  36.6%      S---------VAREALN----------------ESKRDLPYK---DIPGYYAS-----------GPNTRGIIGEYCIQDS     
22 DPOA_HUMAN/1-4  92.2%  19.2%      E---------LVQQILK----------------TERVVIPME---NIQNMYSE------------SSQLLYLLEHTWKDA     
23 DPOL_CHVP1/1-4  92.8%  26.0%      N---------VSKLYLG----------------DQKNDLPAM---QIFEKFEG-----------NAEDRAIIAAYAAKDT     
24 DPOL_THEGO/1-4  85.4%  22.3%      A---------VYEAIFG----------------QPKEKVYAE---EIAQAWET------------GEGLERVARYSMEDA     
25 DPOA_ORYSA/1-5  91.8%  20.6%      Q---------LAETQLK----------------KERKEVSPH---DIPPMFQS------------SGALLKLVEYGETDA     
26 DPOL_RSIV/1-50  91.3%  22.3%      Y---------VANHFVK----------------AGKDPIRPR---DIFHAYNT-------------GLMARVGRYCVKDT     
27 DPOA_YEAST/1-4  92.2%  20.2%      E---------MYQVTCE----------------KEHKPLDID---YQNPQYQN-----------DVNSMTMALQENITNC     
28 DPOL_METTH/1-4  84.7%  20.4%      R---------VYQELFG----------------EEKIDLPGD---RLWEYWDR------------DELRDELFRYSLDDV     
29 DPOA_SCHPO/1-4  89.9%  17.9%      E---------IVLKELD----------------IKRQDINQE---KALQSWTD-----------TAHGLLDYLVHCEIDT     
30 DPOL_ARCFU/1-3  80.4%  21.6%      N---------VAEFLGT---------------KIEIADIEAK---DIYRYWSR-------------GEKEKVLNYARQDA     
31 AA82926|BAA829  95.5%  35.2%      V---------VAEAALG----------------ERKKELSYK---EIPTHFAA-----------GPSQRGIIGEYCFQDS     
32 DPOA_DROME/1-4  87.2%  17.5%      T---------LCKQVLKL-------------KESERMEVNAD---DLLEMYEK------------GESITKLISLTMQDN     
33 AD56202|AAD562  97.3%  37.8%      A---------VAECVLG----------------EQKIDLAYK---DIPVMFAA-----------GPKERGKIGEYCLQDS     
34 DPOL_VARV/1-51  95.5%  14.6%      ----------NDTYKLS----------------FGKDDVDLA---QMYKDYNL-------------NIALDMARYCIHDA     
35 DPOL_ASFL6/1-4  93.8%  19.4%      A---------FLENCGL----------------DSKVDLPYH---LMWKYYET----------RDSEKMADVAYYCIIDA     
36 DPOA_LEIDO/1-4  94.0%  20.1%      D---------QMQLQGITK------------GSNNFEPGTSV---LTPAMLSA-----------SRDIYDVLLQVCN-CA     
37 DPOA_OXYNO/1-5  92.0%  19.3%      H---------LAKVQLQ----------------KDRIDFDDD---LLPTFYVQ------------MAKLFQLIDHTEKDA     
38 DPOL_METVO/1-4  83.9%  19.8%      N---------VVQELFK----------------INKEAVDYG---DIPKMWET--------------EDTTLLRYAYEDA     
39 DPOL_ORFN2/1-5  95.7%  14.2%      P---------GDRVTLA----------------FGKDDVSLA---DMYANYSL-------------DVCLDMARYCLHDA     
40 DPOL_NPVOP/1-4  89.1%  18.3%      T---------LSQYYLG----------------DAKVDLNWQ---TMVEMYNN-------------KQLGTIIKYNVQDC     
41 DPOL_NPVBM/1-4  89.1%  18.6%      T---------ISSYYLG----------------ENKIDLPWT---EMVKMYNT-------------RRLDVIAKYNVQDC     
42 DPOL_FOWPV/1-5  93.4%  13.7%      I---------GSVHNIS----------------FGKDDVDLK---DMYKNYNL-------------EIALDMERYCIHDA     
43 DPOL_SULAC/1-4  87.6%  19.1%      A---------VATALLG----------------ISKVKLDT-----FISFMDI------------DKLIEYNLRDAEITL     
44 AB55093|CAB550  88.2%  19.3%      E---------LSQQILG----------------AERREIYAN---EIPQLYVD------------SKDLISLINWSWNDL     
45 AB57747|CAB577  87.8%  17.7%      A---------VAKALLG----------------TSKVKVDT-----LISFLDV------------EKLIEYNFRDAEITL     
46 DPOA_TRYBB/1-4  93.2%  20.3%      T---------QMEIKGITD------------NRGHFEPGSTV---LVKDSMMS------------SEALCPILLQLLNCA     
47 DPO1_SULOH/1-4  86.4%  18.3%      A---------VATALLG----------------MSKVKLDT-----LISFLDL------------DKLIEYNSRDAEITL     
48 46|DPO2_AERPE/  82.7%  19.6%      A---------DYLGVVK---------------IGERVTLEWW---QIGEYWDD------------PSKREILRKYLRDDV     
49 DPOL_BPT4/1-49  88.9%  14.7%      S---------VAQHETK----------------KGKLPYDGP----INKLRET--------------NHQRYISYNIIDV     
50 DPOL_CBEPV/1-5  95.7%  13.3%      E---------TTKVMLS----------------KDDVDIGNK---NAYVNFTK-------------DKSDDIAYYCTHDT     
51 DPOL_THELI/1-4  83.1%  16.4%      A---------VYEAVLG----------------KTKSKLGAE---EIAAIWET------------EESMKKLAQYSMEDA     
52 DPOL_NPVLD/1-5  89.9%  17.8%      T---------VAEHYLK----------------KSKVDLPIH---DMLQMYGE-------------KRLSRIVEYNVQDC     
53 DPO3_SULSH/1-3  78.6%  13.1%      E---------VANYLGI---------------SPKRDSLNWY---EISRYWDD------------EKNRDLVKQYSLENA     
54 45|DPO1_AERPE/  86.4%  21.3%      S---------ISRALLG----------------KGKVELKAP-----VSELNL----------------NKLIEYNLQDA     
55 DPOL_BPR69/1-5  92.4%  17.8%      Y---------ISEFELN----------------VGKLKYDGP----ISKLRES--------------NHQRYISYNIIDV     
56 DPO2_SULSO/1-3  76.3%  11.6%      V---------DIAECLG-----------------EACNYVKS---NVKIRIEK-------------KRSPVSAKGLIEWS     
57 AF07803|AAF078  92.6%  21.2%      A---------VSEAVLR----------------QKVPSIPYK---VLTEWFSS----------GPAGARYRCIEYVIRRA     
58 410720|G410720  92.6%  13.2%      E---------IIDHVKNKF------------QDKSKQVTNKT---NKSTNLNK-------------TNYTNQQSVVSQQS     
59 DPOL_HSVI1/1-4  91.3%  10.3%      T---------MAKMCTI----------------KERIDSYRKM-KDTVQNFKS---------HGFGCDIIDMMYVCKRKE     
60 AF05246|AAF052  89.7%  16.9%      T---------VANFYLG----------------VGKVELSVK---EMMQLYKE-------------GKFGKIVKYNIRDT     
61 DPOZ_YEAST/1-4  89.5%  21.2%      S---------AAFNILH----------------KRLPHFSFE---SLTNMWNA---------KKSTTELKTVLNYWLSRA     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      N---------VSFHVLHQRFPLFT-FRVLSDWFDNKTDLYRW---KMVDHYVS-------------------------RV     
63 DPOL_BPB03/1-3  76.1%   8.9%      S---------LKKLPFP------------------VKKIAKD---FQLPLLKG--------------DIDYHAERPVGHE     
64 DPO2_ECOLI/1-4  79.4%  16.5%      T---------VAQELLG---------------EGKSIDNPWDRMDEIDRRFAE--------------DKPALATYNLKDC     
65 AB58420|CAB584  88.0%  13.1%      M---------VHVQLLG----------------QPLPYFTDS---YLSELFLTPQCAD----ALGGGERHTALRYLASRV     
66 AC19148|AAC191  89.7%  11.6%      A---------AAKAKLG----------------YDPVELDPE---DMCRMATE--------------QPQTLATYSVSDA     
67 AD46482|AAD464  90.5%  11.7%      A---------AAKAKLG----------------YDPVELDPE---DMCRMATE--------------QPQTLATYSVSDA     
68 DPOE_YEAST/1-6  88.7%  11.1%      A---------VTQSKLG----------------YNPIELDPE---LMTPYAFE--------------KPQHLSEYSVSDA     
69 DPOL_BPPZA/1-4  81.0%   7.7%      S---------LKKLPFP------------------VKKIAKD---FKLTVLKG--------------DIDYHKERPVGYE     
70 DPO1_KLULA/1-5  79.4%  10.8%      S---------KAFLNE---------------ETFKKTDFPHHDL----------------------KTADDLYKVYKEWS     
71 Q9YQZ6          92.8%  15.8%      T---------VARHMLSTAKPNK-----NRCKIQKVGDVHYS---EMDAIFTG----------NDGAALYRYLVYNATDA     
72 O74719          95.7%   9.3%      ----------IIDIEIE----------------KEKLLISSH---NIINYETDGKS---------KKLLDWSREYCCNDV     
73 DPOM_NEUCR      92.8%  13.0%      NK--------DNLEYVG-------------LLPDYEYYIDPKK-GEMITLFEWAAMYTN-----KWSMRKETIIYLEKDI     
74 DPOL_BPPRD      83.7%  11.0%      G---------TAMNELK--------------QFHPYDPVRKGFDEAMRPFYFG-------------GRCQAFEKGIIEDD     
75 Q09038          94.6%   8.5%      IS--------ISEKTFTLS--------------QLSMKIMEASLDRNIELYVP------------TSEEYQFIRNSIYGG     
76 DPO2_KLULA      94.2%   8.1%      IT--------VSVKTFTLS--------------QLSMKIMESKLPKYVKLYVP------------TLEEYSKIRNAIYGG     
77 O78938          96.5%  11.0%      A---------IKYCNLD---------------CISLYEILYKFNTLVFNKFELNIN--------KYPTLPSLSFALFKTK     
78 O21376          93.4%  10.4%      DD--------VKAYLLELFPNG---MMNTKMATKTYTDTDVRLLTMIMDKFKN----------IMYSTARVDLTKCMTIS     
79 O99973          88.5%  11.9%      RI--------SKEKNFIIK--------------YLTNDIEMLR--DIIISFEN----------MVNESYNMICHNNLTST     
80 P78988          95.7%   9.9%      EQ--------TIDYLVKD--------------LDILYEIMHKFNDTIFREYHVN----------ITRIRTISGLAFLIYT     
81 O11414         100.0%   9.7%      ISKGCCPYEAVNEYLMTGN------------YEQETNGYPTLKYWNNADEYHQNKIKG------PYDILKEALIYCIADV     
82 S07183          94.2%   9.4%      N---------VTVDKLP--------------SIREDSLTYLKQDILITAAVMQRAK------AIIWEEYGIDILKVLTIS     
83 Q83895          99.6%   9.2%      VSKGYCPYRAINDFFMLG------------EYEKENNGYPVQKYWNSFEEYLQNKPKHN----QKYNLLEEAKEYCIDDV     
84 DPOM_NEUIN      94.4%  10.6%      DN-------TIPINYVGKC------PDYKYFPKAYTEDFTIEQYQEYANKFKNN----------NWDLKKELIKYCEIDT     
85 Q96206          88.7%   8.6%      LL--------IVALALR---------------SMFDNDFTSMT--VGSDALNT------------YKEMLGVKQWEKYFP     
86 DPOM_PODAN      93.8%   9.5%      N-------EVISQELYN--------ELIVPQWDLRKQTLHYLER-DLLSLLEIIN----------TYNHYVYKRYNVQLT     
87 DPOL_ADEB2     100.0%  10.1%      VEKGSCPYEAVNEFYRIG------------SYQQDEDGFPSLRYWKSSEEYQLNKALWREKNVGAYDIIQQTLHYCVQDV     
88 DPOL_ADE07     100.0%   9.0%      VEKGCCPYKAVNQFYMLG------------SYRAEKDGFPLEEYWKDHEEYLLNRELWEKKSQPRYDIIQETLNYCALDV     
89 DPOM_CLAPU      93.4%   8.8%      IP--------KAEYLKLVK-----------DDWDFKDETLEYLNLDLISLHQVLVK--------VNKAINFLFDIEFTSC     
90 DPOL_ADEB3     100.0%   9.0%      VEKGCCPYKAVNEFYMLG------------TYRTDADSFPQRDYWSSDEEYLLNKSLWLQENSGAYDIVQRTLDYCAMDV     
91 Q9YUR6         100.0%   9.6%      IHKGCCPFKAINEYMSTN------------SLSTDSDSFPSEKYWSSKEEYNEQKEIWLEKKEVKYDIVKELIDYCIKDV     
92 Q39432          91.8%  12.3%      RD--------VVIEYMK-----------------QDIRLLGGVMQKAQDIYWN------------LFEVDLVDWITVASQ     
93 O62074          98.4%   8.5%      DELLKYCRSDVRILVLTLVR-------FIKMCQNTFNDWNPLVNSRTLASYVMFVLKNEYMKPGDVGFIPENGYGTGSNS     
94 DPOM_ASCIM      92.0%   9.9%      G------AVPGYEYFYN----------------TPNKKFTKDDYKKYCKDFNN-----------NWDFNKELKNYCEIDC     
95 DPOM_AGABT      95.5%   9.3%      GD------KPDIKYYVD---------------ENKFNESKLKKYKSLPSILN---------------LKKECLNYLDKDI     
   consensus/100%                    ................................................................................     
   consensus/90%                     ..........h....h......................h...........h.....................h.h...t.     
   consensus/80%                     ..........h.t.hht.................tt.ph..t....h.t.h...............t.h..hh.hshtss     
   consensus/70%                     s.........lsphhlt................tpp.clshp...th.phatt.............ptht.hhpashpcs     

                     cov    pid  561          .         .         .         6         .         .         .         . 640 
 1 DPOL_RHCM6/1-4 100.0% 100.0%      VLVKDLFNTIN---------FHYEAGAI-ARLARIPMRRVIFDGQQIRIYTSL-------LDECACRDFIMPNHKGADNS     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      LLVKRLFEKLN---------YHYEAASV-ARLARIPLRSVIFEGQQIRIYSCI-------LEEAGERNMILPSFLTAKRP     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      VLVRELFEMLA---------FHFEAAAI-ARLARIPLRKVIFDGQQIRIYTCL-------LEECSGRDMILPNMPSLGHG     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      VLVRDLFNTIN---------FHYEAGAI-ARLAKIPLRRVIFDGQQIRIYTSL-------LDECACRDFILPNHYSKGTT     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      ARQ-GPLNVIA---------YHYEAAAS-PNLARIPLRRVIFDGQQIRIYTCI-------LEECSARGMVLPSLPSSPPS     
 6 DPOL_EBV/1-479  96.9%  43.4%      ALVMDLLNHFV---------IHVEVAEI-AKIAHIPCRRVLDDGQQIRVFSCL-------LAAAQKENFILPMPSAS---     
 7 AD49652|AAD496  96.9%  47.0%      VLVVRLFKQIN---------YHYEVAEV-ARLAHVTARCVVFEGQQKKIFPCI-------LTEAKRRNMILPSMVSSH--     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      RLVGKLFFKYL---------PHLELSAV-AKLARITLTRVIFDGQQIRVYTCL-------LKLARERNFILPDNRRRFDS     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      LLVVQLFTKIN---------YHYEMAEV-ASLAYITIRCAVFEGQQKKIFPCI-------LHEAKNLNMILPSMNTNFN-     
10 DPOL_HSVSA/1-4  95.9%  41.4%      VLVMKLLKFFM---------IHVEISEI-AKLAKIPTRRVLTDGQQIRVFSCL-------LAAARAENYILPVSNDV---     
11 DPOD_SOYBN/1-4  93.6%  31.0%      YLPQRLLDKLM---------FIYNYVEM-ARVTGVPISFLLSRGQSIKVLSQL-------LRRARQKNLVIPNAKQAG--     
12 DPOD_CANAL/1-4  93.8%  30.3%      FLPLRLLDKLM---------CLVNYTEM-ARVTGVPFSYLLSRGQQIKVISQL-------FRKCLQEDIVIPNLKSE---     
13 DPOL_HSV1K/1-5  97.1%  36.1%      LLVGQLFFKFL---------PHLELSAV-ARLAGINITRTIYDGQQIRVFTCL-------LRLADQKGFILPDTQGRFRG     
14 DPOD_YEAST/1-4  93.8%  31.0%      YLPLRLMEKLM---------ALVNYTEM-ARVTGVPFSYLLARGQQIKVVSQL-------FRKCLEIDTVIPNMQSQ---     
15 DPOD_PLAFK/1-4  93.8%  30.8%      VLPLRLIDKLL---------FIYNYVEM-ARVTGTPFVYLLTRGQQIKVTSQL-------YRKCKELNYVIPSTYMKV--     
16 DPOD_HUMAN/1-4  93.6%  30.5%      YLPLRLLERLM---------VLVNAVEM-ARVTGVPLSYLLSRGQQVKVVSQL-------LRQAMHEGLLMPVVKSE---     
17 AD55134|AAD551  97.1%  37.8%      LLVGRLFFKFL---------PHLELSAV-ARLAGIGLTRAIYDGQQIRVYTCL-------LRLAGEKGFILPDSRRQGAA     
18 AB58156|CAB581  93.8%  31.2%      YLPQRLMDKLM---------CFVNYTEM-ARVTGVPFNFLLARGQQIKVISQL-------FRKALQHDLVVPNIRVN---     
19 DPOD_DROME/1-4  94.0%  32.5%      YLPLRLLEKLM---------AIVNYMEM-ARVTGVPLESLLTRGQQIKVLSQL-------LRKAKTKGFIMPSYTSQ---     
20 DPOL_HSVE2/1-4  95.9%  41.4%      ALVLDLLRYFM---------THVEISEI-AKIAKIPTRRVLTDGQQIRVFSCL-------LDVAGREGYILPVDRHA---     
21 DPOL_VZVD/1-52  97.1%  36.6%      ALVGKLFFKYL---------PHLELSAV-ARLARITLTKAIYDGQQVRIYTCL-------LGLASSRGFILPDGGYPATF     
22 DPOA_HUMAN/1-4  92.2%  19.2%      KFILQIMCELN---------VLPLALQI-TNIAGNIMSRTLMGGRSERNEFLL-------LHAFYENNYIVPDKQIFRKP     
23 DPOL_CHVP1/1-4  92.8%  26.0%      DLPLKLLKKMA---------ILEDLTEM-ANAVKVPVDYINFRGQQIRAFSCL-------VGKARQMNYAIPDDKAW---     
24 DPOL_THEGO/1-4  85.4%  22.3%      KVTYELGKE-----------FFPMEAQL-SRLVGQSLWDVSRSSTGNLVEWFL-------LRKAYERNELAPNKPDERE-     
25 DPOA_ORYSA/1-5  91.8%  20.6%      CLALELMFHLS---------VLPLTRQL-TNISGNLWGKTLQGSRAQRVEYLL-------LHAFHARKFIVPDKFARSKE     
26 DPOL_RSIV/1-50  91.3%  22.3%      QLCKQLVDYLN---------TWVALCEM-AGVCNTSIMQLFTQGQQVRVFAQI-------YRDCTPMDVVDKVYVIPDGG     
27 DPOA_YEAST/1-4  92.2%  20.2%      MISAEVSYRIQ---------LLTLTKQL-TNLAGNAWAQTLGGTRAGRNEYIL-------LHEFSRNGFIVPDKEGNRSR     
28 DPOL_METTH/1-4  84.7%  20.4%      VATHRIAEK-----------ILPLNLEL-TRLVGQPLFDISRMATGQQAEWFL-------VRKAYQYGELVPNKPSQSDF     
29 DPOA_SCHPO/1-4  89.9%  17.9%      FFIAAVAFKIQ---------MLQLSKNL-TNIAGNSWARTLTGTRAERNEYIL-------LHEFKKNGYIVPDKQQSIRR     
30 DPOL_ARCFU/1-3  80.4%  21.6%      INTYLIAKE-----------LLPMHYEL-SKMIRLPVDDVTRMGRGKQVDWLL-------LSEAKKIGEIAPNPPE----     
31 AA82926|BAA829  95.5%  35.2%      LLVGKLFFKYV---------PHLELSAI-AKLAGILLSRAVFDGQQIRVYTCL-------LRLAGSRNFILPNKPQVRAG     
32 DPOA_DROME/1-4  87.2%  17.5%      SYLLRLMCELN---------IMPLALQI-TNICGNTMTRTLQGGRSERNEFLL-------LHASTEKNYIVPDKKPVSKR     
33 AD56202|AAD562  97.3%  37.8%      RLSGSLFFKFS---------PHLEMSAV-AKLACIPLTRAIGDGQQLRVYTCL-------LQRSTASGFVLPDKKSAFSF     
34 DPOL_VARV/1-51  95.5%  14.6%      CLCQYLWEYYG---------VETKTDAG-ASTYVLPQSMVFGYKASTVIKGPL-------LKLLLETKTILVRSETK---     
35 DPOL_ASFL6/1-4  93.8%  19.4%      QRCQDLLVRHN---------VIPDRREV-GILSYTSLYDCIYYAGGHKVCNML-------IAYAIHDEYGRIACSTIAR-     
36 DPOA_LEIDO/1-4  94.0%  20.1%      VLSTAVVSHLD---------VIRLTKRL-TTIAGNLWSRTLFGARSERIEYLL-------LHTFHDLKFITPDRYVQNFK     
37 DPOA_OXYNO/1-5  92.0%  19.3%      YLTLQLMNHLQ---------VIPLTKQL-TNIAGNLWFRSLQNARAERNEMLL-------LHEFKKKKFVLPDKKQLNAK     
38 DPOL_METVO/1-4  83.9%  19.8%      LYTYKMGNY-----------FLPLEIMF-SRIVNQPLYDTSRMNSSQMVEFLL-------LKRSFEQNMISPNRPSSSSY     
39 DPOL_ORFN2/1-5  95.7%  14.2%      CLCLYLWSHYG---------VETKIAAA-ASTYLLPQSVVFEYRASTCIKGPL-------MKLLLENRTVMVRADTK---     
40 DPOL_NPVOP/1-4  89.1%  18.3%      LLPIRLFNKLK---------LTDFMYSQ-CIMYRLCTDDFICNISHL-ISSTF-------FHLALTNTRADPATGLTVSD     
41 DPOL_NPVBM/1-4  89.1%  18.6%      MLPIKLFVKLK---------MADSVYSQ-CILHRLCTDDVICNISHL-ISVAC-------FYAAITNTRINESTGKEEPD     
42 DPOL_FOWPV/1-5  93.4%  13.7%      CLCKYIWDYYR---------VPSKINAA-SSTYLLPQSLALEYRASTLIKGPL-------LKLLLEERVIYTRKITK---     
43 DPOL_SULAC/1-4  87.6%  19.1%      KLTTFNNNL-----------VLKLMVLL-ARISKLGLEELTRTEVSTWIKNLY-------YWEHRKRNWLIPLKEEILVR     
44 AB55093|CAB550  88.2%  19.3%      LLSLRIVVRLN---------ALPLYIQI-SQIVGGIASRTMMGGRAERNEYLL-------LHAFEKADLIAPDKYNSSES     
45 AB57747|CAB577  87.8%  17.7%      QLTTFNNDL-----------TMKLIVLF-SRISRLGIEELTRTEISTWVKNLY-------YWEHRKRNWLIPLKEEILAK     
46 DPOA_TRYBB/1-4  93.2%  20.3%      VLSFNVASFLD---------VIPLTKRL-TLLAGNLWSRTLYGARSERIEYLL-------LHAFHNLKFVTPDKKKRDLK     
47 DPO1_SULOH/1-4  86.4%  18.3%      KLTTFNNNL-----------VWKLIILL-ARISKMGLEELTRTEVSTWIKNLY-------YWEHRRRNWLIPLKEEILTR     
48 46|DPO2_AERPE/  82.7%  19.6%      RSTMGLAEK-----------FLPFGAEL-SQVSGLPLDQVMAASVGFRLEWRL-------IREAAKLGELVPNRVER---     
49 DPOL_BPT4/1-49  88.9%  14.7%      ESVQAIDKIRG---------FIDLVLSM-SYYAKMPFSGVMSPIKTW--DAII-------FNSLKGEHKVIPQQGSH---     
50 DPOL_CBEPV/1-5  95.7%  13.3%      VLCNCIFKYDM---------IHDKVIAF-SNEYLLPQYMSFKYKSTTNISGLL-------LKTLFCNRSMIVSGNL----     
51 DPOL_THELI/1-4  83.1%  16.4%      RATYELGKE-----------FFPMEAEL-AKLIGQSVWDVSRSSTGNLVEWYL-------LRVAYARNELAPNKPDEEEY     
52 DPOL_NPVLD/1-5  89.9%  17.8%      VLPVELFLKLE---------IADYMYTQ-CMLLYLCTDDLLRNISHK-ITVAY-------FHLALTNTVARRPDPTPDPY     
53 DPO3_SULSH/1-3  78.6%  13.1%      KSIYLLGNF-----------LLSPYSEL-VKIIGLPLDKLSVASWGNRIEASL-------IRTAAKSEELIPIRMDNP--     
54 45|DPO1_AERPE/  86.4%  21.3%      RLTLELLTFSNN-------LVFNLIIMV-MRTSKLGIEDITRSQISNWIRGLM-------YWEHRRRRWLIPSRGEIEKL     
55 DPOL_BPR69/1-5  92.4%  17.8%      YRVLQIDAKRQ---------FINLSLDM-GYYAKIQIQSVFSPIKTW--DAII-------FNSLKEQNKVIPQGRSH---     
56 DPO2_SULSO/1-3  76.3%  11.6%      FISLTPIHE-----------IAYATIGK-VLTINEAWVAFKRRIIIPKVVPRV-------EKLRRLEDIMMV--------     
57 AF07803|AAF078  92.6%  21.2%      NLNLEIMSQLD---------MINRTSEL-ARVFGIDFFSVLSRGSQYRVESML-------LRLAHTQNYLAISPGNQQ--     
58 410720|G410720  92.6%  13.2%      VVSQQSVVS-----------QQSVVSQQ-SVVSQQSVTSQSTQSSQA-NQPNH-------TNQSTHMNHVKTEEHIHASN     
59 DPOL_HSVI1/1-4  91.3%  10.3%      FEAKDGSLNTV---------AQLIIKKF-KPHKATPKIHKMDDITYDKLDGYY-------RAGGTKIAECLIYNLID---     
60 AF05246|AAF052  89.7%  16.9%      VLPVDIFNKCQ---------VANRLYAD-SSIMSLSRDDYLKRISHR-IIVAL-------FDRAIKNKNTNGESDPYFFN     
61 DPOZ_YEAST/1-4  89.5%  21.2%      QINIQLLRKQD---------YIARNIEQ-ARLIGIDFHSVYYRGSQFKVESFL-------IRICKSESFILLSPGK----     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      RGNLQMLEQLD---------LIGKTSEM-ARLFGIQFLHVLTRGSQYRVESMM-------LRIAKPMNYIPVTPSVQQ--     
63 DPOL_BPB03/1-3  76.1%   8.9%      ITPEEYEYIKN---------DIEIIARA-LDIQFKQGLDRMTAGSDSLKGFKD-------ILSTKKFNKVFPKLSLPMD-     
64 DPO2_ECOLI/1-4  79.4%  16.5%      ELVTQIFHKTE---------IMPFLLER-ATVNGLPVDRHGGSVAAF--GHLY-------FPRMHRAGYVAPNLGEV---     
65 AB58420|CAB584  88.0%  13.1%      AAPHRIACKLR---------WFTRLLEF-SRMYGILTKEVITRGSQFRVEATL-------LHFAHPLRYAMLSPSLSQV-     
66 AC19148|AAC191  89.7%  11.6%      VATYYLYMKY----------VHPFIFAL-CTIIPMEPDEVLRKGSGTLCEALL-------MVQAFHANIIFPNKQEQEFN     
67 AD46482|AAD464  90.5%  11.7%      VATYYLYMKY----------VHPFIFAL-CTIIPMEPDEVLRKGSGTLCEALL-------MVQAFHANIIFPNKQEQEFN     
68 DPOE_YEAST/1-6  88.7%  11.1%      VATYYLYMKY----------VHPFIFSL-CTIIPLNPDETLRKGTGTLCEMLL-------MVQAYQHNILLPNKHTDPIE     
69 DPOL_BPPZA/1-4  81.0%   7.7%      ITPDEYAYIKN---------DIQIIAEA-LLIQFKQGLDRMTAGSDDLKGFKD-------IITTKKFKKVFPTLSLGLD-     
70 DPO1_KLULA/1-5  79.4%  10.8%      SVNTEINHV-----------VEKEKLLI-TSEHIVNF--TKNDKSKTLIEWS----------KDYCRNDVLVLSKVWLEF     
71 Q9YQZ6          92.8%  15.8%      ELVIRMVKLID-----------PVQGFL-NRLRATKNIDIMHYGRGNYKFDGY-------VQSRRAVEVPLATVRLRIDK     
72 O74719          95.7%   9.3%      IVLAKVWLEFKI-------AVYEIFSAK-VVDQSYTLAGMSFKLFESNLDPNID------LRHPKKEDYMNMKDSLIGGR     
73 DPOM_NEUCR      92.8%  13.0%      KALYQLMMEMSNN------TYSTFRINI-TRVKTASALAFLVYRTIFLPNEVEE------ENETNSPNNILSLFDKKEEK     
74 DPOL_BPPRD      83.7%  11.0%      IKVYDVNSMYP------------HA----MRNFRHPFSDEFYEANEITEETYF-------IEWEGENNGAVPVRTKTG--     
75 Q09038          94.6%   8.5%      RVAAKNGTYN---------EEIVYADVV-SLYPSAMKLLEHSYGKPSKVFSIN-------FNKHGIYDVTLIHKSNSKP-     
76 DPO2_KLULA      94.2%   8.1%      RVISKNGIYEEN---------IVYADVV-SLYPSAMKLLKHSYGKPKLVDYID-------FEKHGIYRVTLLNKHDQEP-     
77 O78938          96.5%  11.0%      YLKENEVHMLSG------SIATNIRKSY-TGGSVDMYIPLIEKDSKIFIYDINS------LYPFSMKSFKFPIGNPTFFK     
78 O21376          93.4%  10.4%      KLALSMYSNMCHD------ETKKMPLMS-STMDDTFMRKALFGGYNNVINPMAD------EAYYYDVNSFYPAVAVKYRY     
79 O99973          88.5%  11.9%      SLSYKIFKKYY---------LKTHKIEV-PKTYYDKFIRKAYYGGRCEVYKPTNDS---NKIFHYDFNSHYPSSMLNKIP     
80 P78988          95.7%   9.9%      AIYYKVKDKP----------IYYTSGKL-EQFIRKGYYGGIVDVLTEYTDFETYKY---DVNSHYPCAMLKPMPGGIPAV     
81 O11414         100.0%   9.7%      KVTSQLTRKLIEG----YQSFCNDQIKL-TCQFHIFQRPTISSNTHALFKQIL-------YRAEKGQTEHLPGLQAPSEK     
82 S07183          94.2%   9.4%      ALALKIFRRVYYK------DDDDNRIYI-PDDNEAQFIREGYYGGHTDVYKPYG-----ENLYYYDVNSLYPSSMLDDMP     
83 Q83895          99.6%   9.2%      IVTAQLVEKLIEG----YQEFCTTSLKL-ECSFNIFQRPTISSNTQALFKQIFYNEE--DHPSEFLRNLEAPSEKMYDFV     
84 DPOM_NEUIN      94.4%  10.6%      IALYQVLVSFQR------KIYEKFMIDC-TKYPTIPSLAFAIFRKKYLVEDMIP------NIKSKLHNIIKLSYFGGICE     
85 Q96206          88.7%   8.6%      VLSLKVNSEIR----------KAYKGGF-TWVNPKYQGETVYGGMVFDVNSMY---------PAMMKNKLLPYGEPVMFK     
86 DPOM_PODAN      93.8%   9.5%      ESLTIARLALNIYL---KRYLGDNLIPVVLNNSLFTSIKAAYYGGVAEVYRPYG-----KNLRYYDVNSLYPFVAKNTMP     
87 DPOL_ADEB2     100.0%  10.1%      LVTSALVNKLQESY---KN-FIASQVNLPDASFNIFQRPTISSNSHAIFKQILYREV-RPNKANLDNVLLAPSHEMYDYV     
88 DPOL_ADE07     100.0%   9.0%      LVTAELVAKLQES----YAHFIRDSVGLPHVHFNIFQRPTISSNSHAIFRQIVYRAE-KPNRTNLGPGLLAPSHELYDYV     
89 DPOM_CLAPU      93.4%   8.8%      ATVSSLANKIFLSK---FYDDKNKAIPLVKDIDLFNDIHEAYYGGRVEVFNPIIMADSTKSYYYYDVNSLYPFASINDIP     
90 DPOL_ADEB3     100.0%   9.0%      LVTAELVKKLQAS----YLDFVHTSVGLPHCNFNVLQRPTISSNSHAIFRQVVYRSQ-RPNRSSLGNFLLAPSNEMYDYV     
91 Q9YUR6         100.0%   9.6%      KITEELTKTLLN----TFDTFIKEELNL-KCNFNIFKRPTISSNSHAIFRQLHFKQ--NGTKASTLPDIVAPSDEMYSFI     
92 Q39432          91.8%  12.3%      ALGIFRMNFFN---------DMDFHIHIPNRNEDTFIRRGYYGGHADAYIPKG------TNLYYYDVNSLYPFIMKEYPM     
93 O62074          98.4%   8.5%      RIGLKYLQWIEKKNPSLHLKYQLRGGEHKIEANGRTYFADGFNEKTNEVFEVYGCFHHGCPRCFPESDQKHPLRKDVTFL     
94 DPOM_ASCIM      92.0%   9.9%      LALHDILTLFAK-------MIHNEFSVDITRYVSLSSITFAIFRTNFLPENKIP------NITCTKLHYILKQAYTGGYC     
95 DPOM_AGABT      95.5%   9.3%      LGLLELMNKVSLTYFNEYKLNITKFSTLPSITLNIFGIRFYDDQNSIKMINGP-------LSEFIRSSYFGGNSDIFVSG     
   consensus/100%                    ................................................................................     
   consensus/90%                     .h...h.................................hh....t......h..............t.hh.........     
   consensus/80%                     hhshplh.hh..........hh..h.th.sth.th.h..hh..ttt.hh...h.......h..hht.shhhs........     
   consensus/70%                     hlshplhpph..........hh..hhth.sphhth.h.phhhtspphhh..hh.......httthp.shlhPsht.....     

                     cov    pid  641          :         .         .         .         .         7         .         . 720 
 1 DPOL_RHCM6/1-4 100.0% 100.0%      --------------------------------------------------------------------------------     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      GELATESSPVASFEED----------------------------------------------------------------     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      AAAAIEEAAAG---------------------------------------------------------------------     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      VPETNSVAVSPNAAIISTAAVPGDAGSVAAMFQMSPPLQSA---------------------------------------     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      SGGDGAGLEGGDGGTAGRRKKKRSGSAPD---------------------------------------------------     
 6 DPOL_EBV/1-479  96.9%  43.4%      --------------------------------------------------------------------------------     
 7 AD49652|AAD496  96.9%  47.0%      --------------------------------------------------------------------------------     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      QADAASETSELAMDSQSHAFDSTD--------------------------------------------------------     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      --------------------------------------------------------------------------------     
10 DPOL_HSVSA/1-4  95.9%  41.4%      --------------------------------------------------------------------------------     
11 DPOD_SOYBN/1-4  93.6%  31.0%      --------------------------------------------------------------------------------     
12 DPOD_CANAL/1-4  93.8%  30.3%      --------------------------------------------------------------------------------     
13 DPOL_HSV1K/1-5  97.1%  36.1%      AGGEAPKRPAAAREDEERPEE-----------------------------------------------------------     
14 DPOD_YEAST/1-4  93.8%  31.0%      --------------------------------------------------------------------------------     
15 DPOD_PLAFK/1-4  93.8%  30.8%      --------------------------------------------------------------------------------     
16 DPOD_HUMAN/1-4  93.6%  30.5%      --------------------------------------------------------------------------------     
17 AD55134|AAD551  97.1%  37.8%      IEAAAPDQPGDATDECLDGD------------------------------------------------------------     
18 AB58156|CAB581  93.8%  31.2%      --------------------------------------------------------------------------------     
19 DPOD_DROME/1-4  94.0%  32.5%      --------------------------------------------------------------------------------     
20 DPOL_HSVE2/1-4  95.9%  41.4%      --------------------------------------------------------------------------------     
21 DPOL_VZVD/1-52  97.1%  36.6%      EYKDVIPDVGDVE-------------------------------------------------------------------     
22 DPOA_HUMAN/1-4  92.2%  19.2%      QQKLGDEDE-----------------------------------------------------------------------     
23 DPOL_CHVP1/1-4  92.8%  26.0%      --------------------------------------------------------------------------------     
24 DPOL_THEGO/1-4  85.4%  22.3%      --------------------------------------------------------------------------------     
25 DPOA_ORYSA/1-5  91.8%  20.6%      FNSTKRKMNPDTEAARP---------------------------------------------------------------     
26 DPOL_RSIV/1-50  91.3%  22.3%      C-------------------------------------------------------------------------------     
27 DPOA_YEAST/1-4  92.2%  20.2%      AQKQRQN-------------------------------------------------------------------------     
28 DPOL_METTH/1-4  84.7%  20.4%      --------------------------------------------------------------------------------     
29 DPOA_SCHPO/1-4  89.9%  17.9%      HAEAFGA-------------------------------------------------------------------------     
30 DPOL_ARCFU/1-3  80.4%  21.6%      --------------------------------------------------------------------------------     
31 AA82926|BAA829  95.5%  35.2%      TEFENSIASTDEFEG-----------------------------------------------------------------     
32 DPOA_DROME/1-4  87.2%  17.5%      SGAGDTDR------------------------------------------------------------------------     
33 AD56202|AAD562  97.3%  37.8%      GSTLA---------------------------------------------------------------------------     
34 DPOL_VARV/1-51  95.5%  14.6%      --------------------------------------------------------------------------------     
35 DPOL_ASFL6/1-4  93.8%  19.4%      --------------------------------------------------------------------------------     
36 DPOA_LEIDO/1-4  94.0%  20.1%      RGRD----------------------------------------------------------------------------     
37 DPOA_OXYNO/1-5  92.0%  19.3%      DLKKNMFADE----------------------------------------------------------------------     
38 DPOL_METVO/1-4  83.9%  19.8%      --------------------------------------------------------------------------------     
39 DPOL_ORFN2/1-5  95.7%  14.2%      --------------------------------------------------------------------------------     
40 DPOL_NPVOP/1-4  89.1%  18.3%      PYFFNKDDLGLMSSKGSAGLTT----------------------------------------------------------     
41 DPOL_NPVBM/1-4  89.1%  18.6%      PYFFNKNDLSIISGQFNADKATA---------------------------------------------------------     
42 DPOL_FOWPV/1-5  93.4%  13.7%      --------------------------------------------------------------------------------     
43 DPOL_SULAC/1-4  87.6%  19.1%      SNQ-----------------------------------------------------------------------------     
44 AB55093|CAB550  88.2%  19.3%      KKKKEE--------------------------------------------------------------------------     
45 AB57747|CAB577  87.8%  17.7%      SSN-----------------------------------------------------------------------------     
46 DPOA_TRYBB/1-4  93.2%  20.3%      RGRE----------------------------------------------------------------------------     
47 DPO1_SULOH/1-4  86.4%  18.3%      SSQ-----------------------------------------------------------------------------     
48 46|DPO2_AERPE/  82.7%  19.6%      --------------------------------------------------------------------------------     
49 DPOL_BPT4/1-49  88.9%  14.7%      --------------------------------------------------------------------------------     
50 DPOL_CBEPV/1-5  95.7%  13.3%      --------------------------------------------------------------------------------     
51 DPOL_THELI/1-4  83.1%  16.4%      --------------------------------------------------------------------------------     
52 DPOL_NPVLD/1-5  89.9%  17.8%      FFNKYDLSVTSGASAPSTSRPANA--------------------------------------------------------     
53 DPO3_SULSH/1-3  78.6%  13.1%      --------------------------------------------------------------------------------     
54 45|DPO1_AERPE/  86.4%  21.3%      SSAG----------------------------------------------------------------------------     
55 DPOL_BPR69/1-5  92.4%  17.8%      --------------------------------------------------------------------------------     
56 DPO2_SULSO/1-3  76.3%  11.6%      --------------------------------------------------------------------------------     
57 AF07803|AAF078  92.6%  21.2%      --------------------------------------------------------------------------------     
58 410720|G410720  92.6%  13.2%      KATGNHDIPTDVASTNSHKSSNTHINIFKDFLVNNINLINCSNIHLYDAQSIIANNLNTYVNSQIFCINETVNVCNILQI     
59 DPOL_HSVI1/1-4  91.3%  10.3%      --------------------------------------------------------------------------------     
60 AF05246|AAF052  89.7%  16.9%      KFDLNKMVIRKPIAQSPESDSDSDEKKD----------------------------------------------------     
61 DPOZ_YEAST/1-4  89.5%  21.2%      --------------------------------------------------------------------------------     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      --------------------------------------------------------------------------------     
63 DPOL_BPB03/1-3  76.1%   8.9%      --------------------------------------------------------------------------------     
64 DPO2_ECOLI/1-4  79.4%  16.5%      --------------------------------------------------------------------------------     
65 AB58420|CAB584  88.0%  13.1%      --------------------------------------------------------------------------------     
66 AC19148|AAC191  89.7%  11.6%      KLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFRM-------------------------------------------     
67 AD46482|AAD464  90.5%  11.7%      KLTDDGHVLDAETYVGGHVEALESGVFRSDIPCRF---------------------------------------------     
68 DPOE_YEAST/1-6  88.7%  11.1%      RFYDGHLLESETYVGGHVESLEAGVFRSDLKNE-----------------------------------------------     
69 DPOL_BPPZA/1-4  81.0%   7.7%      --------------------------------------------------------------------------------     
70 DPO1_KLULA/1-5  79.4%  10.8%      KNAVEDIFNCELVDQTMTLAGL----------------------------------------------------------     
71 Q9YQZ6          92.8%  15.8%      AVSLARG-------------------------------------------------------------------------     
72 O74719          95.7%   9.3%      CISVNG--------------------------------------------------------------------------     
73 DPOM_NEUCR      92.8%  13.0%      KLTPKYFLP-----------------------------------------------------------------------     
74 DPOL_BPPRD      83.7%  11.0%      --------------------------------------------------------------------------------     
75 Q09038          94.6%   8.5%      --------------------------------------------------------------------------------     
76 DPO2_KLULA      94.2%   8.1%      --------------------------------------------------------------------------------     
77 O78938          96.5%  11.0%      G-------------------------------------------------------------------------------     
78 O21376          93.4%  10.4%      PTTKG---------------------------------------------------------------------------     
79 O99973          88.5%  11.9%      TKISG---------------------------------------------------------------------------     
80 P78988          95.7%   9.9%      STEKN---------------------------------------------------------------------------     
81 O11414         100.0%   9.7%      MYDHIRKSVRGGRCYPSYLGVYEG--------------------------------------------------------     
82 S07183          94.2%   9.4%      IGKTRWVSDLG---------------------------------------------------------------------     
83 Q83895          99.6%   9.2%      RMSLRGGRCYPSFLGIFEEAIYVYDICG----------------------------------------------------     
84 DPOM_NEUIN      94.4%  10.6%      LYKPFG--------------------------------------------------------------------------     
85 Q96206          88.7%   8.6%      G-------------------------------------------------------------------------------     
86 DPOM_PODAN      93.8%   9.5%      G-------------------------------------------------------------------------------     
87 DPOL_ADEB2     100.0%  10.1%      RQSIRGGRCYPTYIGIMEQPIYVYDICG----------------------------------------------------     
88 DPOL_ADE07     100.0%   9.0%      RASIRGGRCYPTYIGILEEPLYVYDICG----------------------------------------------------     
89 DPOM_CLAPU      93.4%   8.8%      G-------------------------------------------------------------------------------     
90 DPOL_ADEB3     100.0%   9.0%      RESIRGGRCYPTYIG-----------------------------------------------------------------     
91 Q9YUR6         100.0%   9.6%      RQSVRGGRCYPTHLGIFKEKIFVYDICG----------------------------------------------------     
92 Q39432          91.8%  12.3%      PSGKPVWASN----------------------------------------------------------------------     
93 O62074          98.4%   8.5%      DLYEDTLRREHDLKNAG---------------------------------------------------------------     
94 DPOM_ASCIM      92.0%   9.9%      DVFK----------------------------------------------------------------------------     
95 DPOM_AGABT      95.5%   9.3%      EERLVKN-------------------------------------------------------------------------     
   consensus/100%                    ................................................................................     
   consensus/90%                     ................................................................................     
   consensus/80%                     ................................................................................     
   consensus/70%                     ................................................................................     

                     cov    pid  721          .         .         :         .         .         .         .         8 800 
 1 DPOL_RHCM6/1-4 100.0% 100.0%      ---------------------------------------------------------SEPTDVSYQGA-TVFEPEVG-YY     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      -----------------------------------------SEQTSDSSLGEVSSQGSSDGGVGYQGA-TVLEPDVG-FY     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      ---------------------------------------------GEGDETSEGENSNNSRTVGYQGA-TVLEPECG-FH     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      ----------------PSSQDGVSPGSGSNSSSSVGVFSVGSGSSGGVGVSNDNHGAGGTAAVSYQGA-TVFEPEVG-YY     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      ---------------------------GEDEDDPEGGDEGENGECRENGLEKEGSQGSASGNVGYQGA-TVLAPECG-YH     
 6 DPOL_EBV/1-479  96.9%  43.4%      ------------------------------------------------------------DRDGYQGA-TVIQPLSG-FY     
 7 AD49652|AAD496  96.9%  47.0%      ----------------------------------------------------------NRQGIGYKGA-TVLEPKTG-YY     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      --------------------------------EPDGVDGTPDAAGSGATSENGGGKPGVGRAVGYQGA-KVLDPVSG-FH     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      ---------------------------------------------------------KGKENVGYKGA-TVLEPKIG-YY     
10 DPOL_HSVSA/1-4  95.9%  41.4%      ------------------------------------------------------------NADGFQGA-TVINPIPG-FY     
11 DPOD_SOYBN/1-4  93.6%  31.0%      -----------------------------------------------------------SEQGTFEGA-TVLEARAG-FY     
12 DPOD_CANAL/1-4  93.8%  30.3%      -----------------------------------------------------------GSNEEYEGA-TVIEPERG-YY     
13 DPOL_HSV1K/1-5  97.1%  36.1%      -----------------------------------EGEDEDEREEGGGEREPEGARETAGRHVGYQGA-KVLDPTSG-FH     
14 DPOD_YEAST/1-4  93.8%  31.0%      -----------------------------------------------------------ASDDQYEGA-TVIEPIRG-YY     
15 DPOD_PLAFK/1-4  93.8%  30.8%      -----------------------------------------------------------NTNEKYEGA-TVLEPIKG-YY     
16 DPOD_HUMAN/1-4  93.6%  30.5%      ------------------------------------------------------------GGEDYTGA-TVIEPLKG-YY     
17 AD55134|AAD551  97.1%  37.8%      -------------------------------------VEEENDEEAERPVADAGSRPSGGRHVGYQGA-KVLDPVAG-FH     
18 AB58156|CAB581  93.8%  31.2%      -----------------------------------------------------------GTDEQYEGA-TVIEPIKG-YY     
19 DPOD_DROME/1-4  94.0%  32.5%      -----------------------------------------------------------GSDEQYEGA-TVIEPKRG-YY     
20 DPOL_HSVE2/1-4  95.9%  41.4%      ------------------------------------------------------------DAEGYQGA-TVIDPSPG-FY     
21 DPOL_VZVD/1-52  97.1%  36.6%      -------------------------------------------EEMDEDESVSPTGTSSGRNVGYKGA-RVFDPDTG-FY     
22 DPOA_HUMAN/1-4  92.2%  19.2%      -----------------------------------------------EIDGDTNKYKKGRKKGAYAGG-LVLDPKVG-FY     
23 DPOL_CHVP1/1-4  92.8%  26.0%      -----------------------------------------------------------ATEGKYEGA-TVLDAKKG-AY     
24 DPOL_THEGO/1-4  85.4%  22.3%      ---------------------------------------------------------LARRRESYAGG-YVKEPERG-LW     
25 DPOA_ORYSA/1-5  91.8%  20.6%      ----------------------------------------DEADPSIDDEGHHVDQGKTKKGPSYAGG-LVLEPKKG-LY     
26 DPOL_RSIV/1-50  91.3%  22.3%      -------------------------------------------------------DSDVVSPSSYTGA-YVYEPVPG-VY     
27 DPOA_YEAST/1-4  92.2%  20.2%      --------------------------------------------------EENADAPVNSKKAKYQGG-LVFEPEKG-LH     
28 DPOL_METTH/1-4  84.7%  20.4%      ---------------------------------------------------------SSRRGRRAVGG-YVKEPEKG-LH     
29 DPOA_SCHPO/1-4  89.9%  17.9%      -------------------------------------------------EDGLQEESLGKKKDKYKGG-LVFEPQKG-LY     
30 DPOL_ARCFU/1-3  80.4%  21.6%      ------------------------------------------------------------HAESYEGA-FVLEPERG-LH     
31 AA82926|BAA829  95.5%  35.2%      ------------------------------------------EPSPSNPKASSSFHGNGGRVVGYQGA-KVLDPISG-FH     
32 DPOA_DROME/1-4  87.2%  17.5%      ------------------------------------------------TLSGADATMQTKKKAAYAGG-LVLEPMRG-LY     
33 AD56202|AAD562  97.3%  37.8%      ---------------------------------------------------SDASDAPATRNVGYQGA-KVLDPEIG-FH     
34 DPOL_VARV/1-51  95.5%  14.6%      ------------------------------------------------------------QKFPYEGG-KVFAPKQK-MF     
35 DPOL_ASFL6/1-4  93.8%  19.4%      ---------------------------------------------------------GKREHGKYPGA-FVIDPVKG-LE     
36 DPOA_LEIDO/1-4  94.0%  20.1%      ----------------------------------------------------DEEEEDGKRKAKYQGG-MVLDPKCG-LY     
37 DPOA_OXYNO/1-5  92.0%  19.3%      -----------------------------------------------YEEGDGKTKGGKRKKAAYAGG-LVIEPKAG-FY     
38 DPOL_METVO/1-4  83.9%  19.8%      ---------------------------------------------------------RERAKFSYEGG-YVREPLKG-IQ     
39 DPOL_ORFN2/1-5  95.7%  14.2%      ------------------------------------------------------------SKFFYEGG-RVMAPKQK-MH     
40 DPOL_NPVOP/1-4  89.1%  18.3%      ----------------------------------GMSRLRRRRIPLKDVPATAIRLGAIDENVKYEGG-KVLQPRAG-VY     
41 DPOL_NPVBM/1-4  89.1%  18.6%      ----------------------------------GISNLKRKLTPLKNIPKDAINLGPANQTVKYKGG-KVLQPRAS-IY     
42 DPOL_FOWPV/1-5  93.4%  13.7%      ------------------------------------------------------------VRYPYIGG-KVFLPSQK-TF     
43 DPOL_SULAC/1-4  87.6%  19.1%      -----------------------------------------------------VKTAAVIKGKKYKGA-VVIDPPAG-VY     
44 AB55093|CAB550  88.2%  19.3%      ---------------------------------------------------SQEGDEKKSGKAQYSGG-LVLEPKKG-LY     
45 AB57747|CAB577  87.8%  17.7%      -----------------------------------------------------IRTSALIKGKGYKGA-VVIDPPAG-IF     
46 DPOA_TRYBB/1-4  93.2%  20.3%      -----------------------------------------------------DDDDEGKRKTKYQGG-MVLEPKSG-LY     
47 DPO1_SULOH/1-4  86.4%  18.3%      -----------------------------------------------------IKTAAIIKGKRYKGA-VVIDPPAG-VF     
48 46|DPO2_AERPE/  82.7%  19.6%      ------------------------------------------------------------SEGRYAGA-IVLRPKPG-VH     
49 DPOL_BPT4/1-49  88.9%  14.7%      ------------------------------------------------------------VKQSFPGA-FVFEPKPI-AR     
50 DPOL_CBEPV/1-5  95.7%  13.3%      ------------------------------------------------------------EFEKFEGG-YVLEPKQK-YI     
51 DPOL_THELI/1-4  83.1%  16.4%      ---------------------------------------------------------KRRLRTTYLGG-YVKEPEKG-LW     
52 DPOL_NPVLD/1-5  89.9%  17.8%      ---------------------------------IDLSQLKRTPVDAARIPPSAVKLCSTRQSCTYKGG-KVLSPKPG-FN     
53 DPO3_SULSH/1-3  78.6%  13.1%      -----------------------------------------------------------NRSSKIKKT--VIEPKIG-IY     
54 45|DPO1_AERPE/  86.4%  21.3%      -----------------------------------------------------ARVGAIIKDKKYRGA-IVLDPPVG-IF     
55 DPOL_BPR69/1-5  92.4%  17.8%      ------------------------------------------------------------PVQPYPGA-FVKEPIPN-RY     
56 DPO2_SULSO/1-3  76.3%  11.6%      ----------------------------------------------------------------DKGG-LILFPQPG-CY     
57 AF07803|AAF078  92.6%  21.2%      ----------------------------------------------------------VASQPAMECVPLVMEPESA-FY     
58 410720|G410720  92.6%  13.2%      IEKTRDLTKLSGYIWMRSLLCYTSERVEFFLLHEYNKKKFITPLIKKRTKKIETNQMKNKNTAKYLGG-LVLDPLCG-YY     
59 DPOL_HSVI1/1-4  91.3%  10.3%      ------------------------------------------------------------SLLVIRIA-KNLKPMEEYIY     
60 AF05246|AAF052  89.7%  16.9%      -----------------------------EGDPMDLTLLLRRRVPEHEIPSNAVRLCPLKCNIKYTGG-MVLSPVPG-YY     
61 DPOZ_YEAST/1-4  89.5%  21.2%      --------------------------------------------------------KDVRKQKALECVPLVMEPESA-FY     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      ----------------------------------------------------------RSQMRAPQCVPLIMEPESR-FY     
63 DPOL_BPB03/1-3  76.1%   8.9%      ----------------------------------------------------------KEIRRAYRGGFTWLNDKYK-EK     
64 DPO2_ECOLI/1-4  79.4%  16.5%      ------------------------------------------------------------PPHASPGG-YVMDSRPG-LY     
65 AB58420|CAB584  88.0%  13.1%      ----------------------------------------------------------HRQPRIECIP-LVMQPKSGLYR     
66 AC19148|AAC191  89.7%  11.6%      --------------------NPAAFDFLLQRVEKTLRHALEEEEKVPVEQVTNFEEVCDEIKSKLAS----LKDVPS-RI     
67 AD46482|AAD464  90.5%  11.7%      ---------------------RMNPAAFDFLLQRVEKTMRHAIEEEEKVPVEQATNFQEVCEQIKTKL-TSLKDVPN-RI     
68 DPOE_YEAST/1-6  88.7%  11.1%      -----------------------FKIDPSAIDELLQELPEALKFSVEVENKSSVDKVTNFEEIKNQITQKLLELKENNIR     
69 DPOL_BPPZA/1-4  81.0%   7.7%      ----------------------------------------------------------KEVRYAYRGGFTWLNDRFK-EK     
70 DPO1_KLULA/1-5  79.4%  10.8%      -----------------------------------SYKLFQANMPFDVELRHPNKEDYFNMREALIGG-RCIS-VNG-IY     
71 Q9YQZ6          92.8%  15.8%      -----------------------------------------------AEDRLMPAIYRRGQKIEIKGG-YVAEPLTGLTF     
72 O74719          95.7%   9.3%      ---------------------------------------------------IYENILCLDVKSLYPAAMAFYDQPYGQFR     
73 DPOM_NEUCR      92.8%  13.0%      --------------------------------------------------KLKG-RLERAVRAAYFGG--RNEIFIP-II     
74 DPOL_BPPRD      83.7%  11.0%      ------------------------------------------------------------LDFNQRSG--IFHTSIHEWR     
75 Q09038          94.6%   8.5%      -----------------------------------------------------------NHYLEFVPR-RIDKKLIWSWF     
76 DPO2_KLULA      94.2%   8.1%      -----------------------------------------------------------KNYLNFVPR-RINRKLTWEWF     
77 O78938          96.5%  11.0%      ---------------------------------------------------------DITRINKDAFGFFYCKIITPEYL     
78 O21376          93.4%  10.4%      -------------------------------------------------FDMSYPEGLDYKDFNYPETTGVLHCEVETPK     
79 O99973          88.5%  11.9%      ----------------------------------------------------WKSPQIREPIDPFTIYDVVVNIGKQYIP     
80 P78988          95.7%   9.9%      ----------------------------------------------------------LDNIFGFVEA-IVEAPTKEELR     
81 O11414         100.0%   9.7%      ------------------------------PIYVYDICGMYASALTHPMPFGRTEDPLTASISIKTFQDKLDSPAKLSYF     
82 S07183          94.2%   9.4%      ---------------------------------------------------SKKSKIVLNDMFGFIRA-FIICPKHIKKP     
83 Q83895          99.6%   9.2%      ---------------------------MYASALTHPLPYGKTLNAFEANAQIDYFQELLQRKEKIDYFDNSIKPMIVVAD     
84 DPOM_NEUIN      94.4%  10.6%      -----------------------------------------------------VNIKSYDVNSLYPFAMKYFKMPSGIPK     
85 Q96206          88.7%   8.6%      ---------------------------------------------------------EYKKNVEYPLYIQQVRCFFELKK     
86 DPOM_PODAN      93.8%   9.5%      ---------------------------------------------------------HECKYIESKKG-LKLSELFGFFY     
87 DPOL_ADEB2     100.0%  10.1%      ---------------------------------------MYASALTHPFPSGQPLNPYERALAATEWIRKLENLEQKIDY     
88 DPOL_ADE07     100.0%   9.0%      ---------------------------------------MYASALTHPMPWGTPLNPYERALAVREWQMTLDDPATISYF     
89 DPOM_CLAPU      93.4%   8.8%      ---------------------------------------------------------LKCTFYEVVKANVNIHELFGFFY     
90 DPOL_ADEB3     100.0%   9.0%      ------------------------------------------VLTEAIYVYDICGMYASALTHPFPAG-KPLNPFDRALA     
91 Q9YUR6         100.0%   9.6%      ---------------------------------------MYASALTHPMPYGFPIGEKERNNEITKLNEKLKKTKTKLSY     
92 Q39432          91.8%  12.3%      -----------------------------------------------------LGGMDLDSLYGFIEA-YVECPESIVRP     
93 O62074          98.4%   8.5%      --------------------------------------YKVRSKWVCEIDDEMTRDPEMKKFIDLNQHDKGIHPRDGLFG     
94 DPOM_ASCIM      92.0%   9.9%      --------------------------------------------------------PEGKNIHSYDIN--SLYPSAMAKF     
95 DPOM_AGABT      95.5%   9.3%      -------------------------------------------------------GYHYDMNSQYPYAMLQSMPTGNPVF     
   consensus/100%                    ................................................................................     
   consensus/90%                     ................................................................h.hh.hhhp.....hh     
   consensus/80%                     ............................................................t..th.ts.hlhps..t.hh     
   consensus/70%                     ...........................................................tpt.tatuu.hlhcP..s.ha     

                     cov    pid  801          .         .         .         .         :         .         .         . 880 
 1 DPOL_RHCM6/1-4 100.0% 100.0%      SDP--------------VVVFDFASLYPS--------------------IIMAHNLCYSTFVAP----------------     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      DTP--------------VAVFDFASLYPS--------------------IIMRHNLCYSTYLPLG---------------     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      HVP--------------VCVFDFASLYPS--------------------IIMSNNLCYSTLLVE----------------     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      NDP--------------VAVFDFASLYPS--------------------IIMAHNLCYSTLLVP----------------     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      HNP--------------ILVFDFASLYPS--------------------IIMSNNLCYSTLLVD----------------     
 6 DPOL_EBV/1-479  96.9%  43.4%      NSP--------------VLVVDFASLYPS--------------------IIQAHNLCYSTMITPGE--------------     
 7 AD49652|AAD496  96.9%  47.0%      AVP--------------TVVFDFQSLYPS--------------------IMMAHNLCYSTLVLDE---------------     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      VDP--------------VVVFDFASLYPS--------------------IIQAHNLCFTTLALDE---------------     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      ATP--------------TVVFDFQSLYPS--------------------IMMAHNLCYSTLVVDE---------------     
10 DPOL_HSVSA/1-4  95.9%  41.4%      NNA--------------VLVVDFASLYPS--------------------IIQAHNLCYSTLIPHHA--------------     
11 DPOD_SOYBN/1-4  93.6%  31.0%      EKP--------------IATLDFASLYPS--------------------IMMAYNLCYCTLVIPE---------------     
12 DPOD_CANAL/1-4  93.8%  30.3%      DVP--------------IATLDFSSLYPS--------------------IMMAHNLCYTTLLNKN---------------     
13 DPOL_HSV1K/1-5  97.1%  36.1%      VNP--------------VVVFDFASLYPS--------------------IIQAHNLCFSTLSLRA---------------     
14 DPOD_YEAST/1-4  93.8%  31.0%      DVP--------------IATLDFNSLYPS--------------------IMMAHNLCYTTLCNKA---------------     
15 DPOD_PLAFK/1-4  93.8%  30.8%      IEP--------------ISTLDFASLYPS--------------------IMIAHNLCYSTLIKSNH--------------     
16 DPOD_HUMAN/1-4  93.6%  30.5%      DVP--------------IATLDFSSLYPS--------------------IMMAHNLCYTTLLRPG---------------     
17 AD55134|AAD551  97.1%  37.8%      VSP--------------VVVFDFASLYPS--------------------IIQAHNLCFSTLALDA---------------     
18 AB58156|CAB581  93.8%  31.2%      DTP--------------IATLDFSSLYPS--------------------IMQAHNLCYTTLLDSN---------------     
19 DPOD_DROME/1-4  94.0%  32.5%      ADP--------------ISTLDFASLYPS--------------------IMMAHNLCYTTLVLGG---------------     
20 DPOL_HSVE2/1-4  95.9%  41.4%      NTP--------------VLVVDFASLYPT--------------------IIQAHNLCYSTMIPGDR--------------     
21 DPOL_VZVD/1-52  97.1%  36.6%      IDP--------------VVVLDFASLYPS--------------------IIQAHNLCFTTLTLNFE--------------     
22 DPOA_HUMAN/1-4  92.2%  19.2%      DKF--------------ILLLDFNSLYPS--------------------IIQEFNICFTTVQRVA---------------     
23 DPOL_CHVP1/1-4  92.8%  26.0%      FTP--------------IAALDFASLYPS--------------------IIRAHNMSPETLVMEK---------------     
24 DPOL_THEGO/1-4  85.4%  22.3%      EN---------------IVYLDFRSLYPS--------------------IIITHNVSPDTLNREG---------------     
25 DPOA_ORYSA/1-5  91.8%  20.6%      DKY--------------VLLLDFNSLYPS--------------------IIQEYNICFTTVDRSA---------------     
26 DPOL_RSIV/1-50  91.3%  22.3%      KN---------------VIPMDFQSLYPS--------------------IIISKNICYSTLVDQGGEEYAWQEHEGCEHD     
27 DPOA_YEAST/1-4  92.2%  20.2%      KNY--------------VLVMDFNSLYPS--------------------IIQEFNICFTTVDRN----------------     
28 DPOL_METTH/1-4  84.7%  20.4%      EN---------------IVQFDFRSLYPS--------------------IIISKNISPDTLTDDE---------------     
29 DPOA_SCHPO/1-4  89.9%  17.9%      ETC--------------ILVMDFNSLYPS--------------------IIQEYNICFTTVDRSP---------------     
30 DPOL_ARCFU/1-3  80.4%  21.6%      EN---------------VACLDFASMYPS--------------------IMIAFNISPDTYGCRD---------------     
31 AA82926|BAA829  95.5%  35.2%      VDP--------------VVVFDFASLYPS--------------------IIQAHNLCFTTLINDD---------------     
32 DPOA_DROME/1-4  87.2%  17.5%      EKY--------------VLLMDLNSLYPS--------------------IIQEYNICFNPVQQPV---------------     
33 AD56202|AAD562  97.3%  37.8%      VTP--------------VVVFDFASLYPS--------------------IIQSNNLCYSTLTHDP---------------     
34 DPOL_VARV/1-51  95.5%  14.6%      SNN--------------VLIFDYNSLYPN--------------------VCIFGNLSPETLVGVVV--------------     
35 DPOL_ASFL6/1-4  93.8%  19.4%      QDK-------------PTTGLDFASLYPS--------------------LIMAYNFSPEKFVASRD--------------     
36 DPOA_LEIDO/1-4  94.0%  20.1%      SDY--------------ILLLDFNSLYPS--------------------LIQEFNICFTTVDRES---------------     
37 DPOA_OXYNO/1-5  92.0%  19.3%      DNI--------------ILLLDFNSLYPS--------------------IIQEYNLCFTTVNRRP---------------     
38 DPOL_METVO/1-4  83.9%  19.8%      ED---------------IVSLDFMSLYPS--------------------ILISHNISPETVIYEE---------------     
39 DPOL_ORFN2/1-5  95.7%  14.2%      NKH--------------VLIFDYNSLYPN--------------------VCIYANLSPETLVGVVV--------------     
40 DPOL_NPVOP/1-4  89.1%  18.3%      EF---------------AFSLDFNSLYLT--------------------IMIDICACLTNLILCE---------------     
41 DPOL_NPVBM/1-4  89.1%  18.6%      KN---------------AFSLDFNSLYLT--------------------IMIAICACLSNLVLCE---------------     
42 DPOL_FOWPV/1-5  93.4%  13.7%      ENN--------------VMIFDYNSLYPN--------------------VCIYGNLSPEKLVCIL---------------     
43 DPOL_SULAC/1-4  87.6%  19.1%      FN---------------VVVLDFASLYPS--------------------IIKNWNISYETIEIDE---------------     
44 AB55093|CAB550  88.2%  19.3%      ETL--------------ILLLDFNSLYPS--------------------IIQEYNICYTTLEYSK---------------     
45 AB57747|CAB577  87.8%  17.7%      FN---------------ITVLDFASLYPS--------------------IIRTWNLSYETVDIQQ---------------     
46 DPOA_TRYBB/1-4  93.2%  20.3%      SEY--------------ILLLDFNSLYPS--------------------LIQEFNVCYTTIDRDE---------------     
47 DPO1_SULOH/1-4  86.4%  18.3%      FN---------------VVVLDFASLYPS--------------------IIRNWNISYETVDVEN---------------     
48 46|DPO2_AERPE/  82.7%  19.6%      ED---------------IAVLDFASMYPN--------------------IMVKYNVGPDTLVRP----------------     
49 DPOL_BPT4/1-49  88.9%  14.7%      RY---------------IMSFDLTSLYPS--------------------IIRQVNISPETIRGQFKVHPIHEYIAGTAPK     
50 DPOL_CBEPV/1-5  95.7%  13.3%      DSI--------------TAVFDFNSEYPS--------------------NIIEANLSPEKVEKVIK--------------     
51 DPOL_THELI/1-4  83.1%  16.4%      EN---------------IIYLDFRSLYPS--------------------IIVTHNVSPDTLEKEG---------------     
52 DPOL_NPVLD/1-5  89.9%  17.8%      RW---------------VATLDFNALYPT--------------------IMMWEGVCMSSNVFIA---------------     
53 DPO3_SULSH/1-3  78.6%  13.1%      SD---------------VYVLDISSVYLS--------------------VIRKFNISPDTLVKGQ---------------     
54 45|DPO1_AERPE/  86.4%  21.3%      FR---------------VLVLDFASLYPS--------------------LIKQWNLSYETVNNPN---------------     
55 DPOL_BPR69/1-5  92.4%  17.8%      KY---------------VMSFDLTSLYPS--------------------IIRQVNISPETIAGTFKV-------------     
56 DPO2_SULSO/1-3  76.3%  11.6%      DN---------------VYQVDFSSMYPS--------------------LIVKHNISAETVEACD---------------     
57 AF07803|AAF078  92.6%  21.2%      DDP--------------VIVLDFQSLYPS--------------------MIIAYNLCFSTCLGKLAHLKM----------     
58 410720|G410720  92.6%  13.2%      DTF--------------VLYLDFNSLYPS--------------------IIIEYNVCFSTLKLKNCDVSIEDNKLNTKKN     
59 DPOL_HSVI1/1-4  91.3%  10.3%      RQL-------------ACYNIDTAAHTRG--------------------VMNFCGFIQSTKVVEVS--------------     
60 AF05246|AAF052  89.7%  16.9%      GL---------------TFTLDFSQLYTS--------------------IMIAESACLSNLFFGS---------------     
61 DPOZ_YEAST/1-4  89.5%  21.2%      KSP--------------LIVLDFQSLYPS--------------------IMIGYNYCYSTMIGRVREINLTEN-------     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      SNS--------------VLVLDFQSLYPS--------------------IVIAYNYCFSTCLGHVENLGKYD--------     
63 DPOL_BPB03/1-3  76.1%   8.9%      EIG-------------EGMVFDVNSLYPS--------------------QMYSRPLPYGAPIVFQG--------------     
64 DPO2_ECOLI/1-4  79.4%  16.5%      DS---------------VLVLDYKSLYPS--------------------IIRTFLI--DPVGLVEGMAQ-----------     
65 AB58420|CAB584  88.0%  13.1%      HDP--------------VVVLDFRSLYPS--------------------LIIAYNLCYSTCLGIVQPHSHGRLGVLPRFR     
66 AC19148|AAC191  89.7%  11.6%      ECP-------------LIYHLDVGAMYPN--------------------IILTNRLQPSAMVDEATCAACDFNKPGANCQ     
67 AD46482|AAD464  90.5%  11.7%      ECP-------------LIYHLDVGAMYPN--------------------IILTNRLQPSAIVDEATCAACDFNKPGASCQ     
68 DPOE_YEAST/1-6  88.7%  11.1%      NELP------------LIYHVDVASMYPN--------------------IMTTNRLQPDSIKAERDCASCDFNRPGKTCA     
69 DPOL_BPPZA/1-4  81.0%   7.7%      EIG-------------EGMVFDVNSLYPA--------------------QMYSRLLPYGEPIVFEG--------------     
70 DPO1_KLULA/1-5  79.4%  10.8%      KD---------------VLCLDVKSLYPA--------------------SMAFYDQPYGSFKRVSSRPKDELGIYYVRVT     
71 Q9YQZ6          92.8%  15.8%      ACEKQG----------PEVTLDFASLYPS--------------------NMMDANVGPDAVLDVRR--------------     
72 O74719          95.7%   9.3%      RVQQRMT---------EELGIYYVRVIPH--------------------TKINSNFFPVRYNNKITYNN-----------     
73 DPOM_NEUCR      92.8%  13.0%      NN---------------IFSFDFNSLYPTAMM------------MPMPVGIPVHTFCKNLNEIFGFVRAKIITPAIN---     
74 DPOL_BPPRD      83.7%  11.0%      AG------------------IDTGTIKPNR-------------------IIRTINFTETTTFGAFID-------------     
75 Q09038          94.6%   8.5%      KEHRG-----------TYHTYDLLIAIQEG-----------------FEIICHSGIEYPNKGYIFN--------------     
76 DPO2_KLULA      94.2%   8.1%      KIHEG-----------WYHTYDLIIAKSEG-----------------FDIYCHEGFEYPEKDYIFN--------------     
77 O78938          96.5%  11.0%      EHPILQT---------HLKTSDGIRTLAP--------------------LGSWEDMLFSEEMYNAMKYG-----------     
78 O21376          93.4%  10.4%      NLVTGVL---------PVKDINKGVMYPLGHFL-----------GIWTTVELDYALSLGYKITVYKG-------------     
79 O99973          88.5%  11.9%      SIP--------------FRDKDNTLKFPSG---------------TFRTNVTGVELKYSIDNKYAN--------------     
80 P78988          95.7%   9.9%      VAILPCKK--------DGKTVLFRDTVEGVWWS--------------EELKMAREYGYKILEIKT---------------     
81 O11414         100.0%   9.7%      GES-------------IKPMIVYADCYPPPLEHVDV--------LPPLCSRKSGRLCWTNEPLLGEVVTTIDLITLHNRG     
82 S07183          94.2%   9.4%      LLP--------------YKKDDGTIIFPTGRFLG---------------VYFSEELKYAVSLGYKVYP------------     
83 Q83895          99.6%   9.2%      CEP---------------PSLDYLDVLPP------------------LCSKKSGKLCWSNETLINEVLTSIDLITLHN--     
84 DPOM_NEUIN      94.4%  10.6%      YVKGTLQN--------IVRFTDSICEVPFGFYN--------------VKVKTPLNLDKPFLPTRLNTPAG----------     
85 Q96206          88.7%   8.6%      DKIP-------------CIQIKGNARFGQN------------------EYLSTSGDEYVDLYVTN---------------     
86 DPOM_PODAN      93.8%   9.5%      CKVTTNNQYLG-----LLPVHNQGLIMPNGQWYG---------------WYFSEELKFAEVNGYNIEVIKG---------     
87 DPOL_ADEB2     100.0%  10.1%      FDECLLPG---------IFTIDADPPDELFLDELP-----------PFCSRKGGRLCWANEPLRGEVATS----------     
88 DPOL_ADE07     100.0%   9.0%      DKDLLPG----------IFTIDADPPDEFMLDPLP-----------PFCSRKGGRLCWTNEPLRGEVATTVDLITLHN--     
89 DPOM_CLAPU      93.4%   8.8%      CKIKSPDNLYL---GLLPKRTETSLIFPGGAWEG---------------WYFSEELKFAVAHGYEVEIIKG---------     
90 DPOL_ADEB3     100.0%   9.0%      IKNWQDRLTQL---HRPIDYFDRTLLPAIFTIDADPPPEAFLDVIPPFCSRKGGRLCWTNETLRGEVVTCLDAITLHN--     
91 Q9YUR6         100.0%   9.6%      FTDIKP----------MVVMIDAIPPPPEHLDPLPP-----------LCSRQSGKLCWTNEILKNEIVTSIDIITLHN--     
92 Q39432          91.8%  12.3%      FLP-------------YHKVKDPTLLFPTGEWIG---------------VYYTEELKYAKSLGYTVIP------------     
93 O62074          98.4%   8.5%      GRTQVFRSLVTATQMFSLQYYDFVSMYPYLNAGGTPYPTG-------NPTIITDNLPHAGEELRYRGLVKCDVLPPKSAR     
94 DPOM_ASCIM      92.0%   9.9%      DMPTG------------TPLHILGDPYKF--------------------TKDPFGFVFAEVTAPDLKVP-----------     
95 DPOM_AGABT      95.5%   9.3%      STNTDLN--------YYRNGFVFARVTPPSKDTLVN-------------LFIPRRSDDGSVICDRN--------------     
   consensus/100%                    ................................................................................     
   consensus/90%                     .................h..hDht.hhs......................h...tht.tt....................     
   consensus/80%                     t................hhhhDhtshaPs....................hh.thsls.ssh.h.................     
   consensus/70%                     pp...............lhshDasSlYPs....................lhhshslshssh.h.................     

                     cov    pid  881          .         9         .         .         .         .         :         . 960 
 1 DPOL_RHCM6/1-4 100.0% 100.0%      ------------------------------------------------------------------------GGESPPE-     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      ------------------------------------------------------------------------RDDGLSD-     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      ------------------------------------------------------------------------GSPEVPE-     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      ------------------------------------------------------------------------GGEYPVDP     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      ------------------------------------------------------------------------GSPPVPD-     
 6 DPOL_EBV/1-479  96.9%  43.4%      ----------------------------------------------------------------------EHRLAGLRPG     
 7 AD49652|AAD496  96.9%  47.0%      ------------------------------------------------------------------------RQIAGLSE     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      -----------------------------------------------------------------------VDLAGLQPS     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      ------------------------------------------------------------------------NAVIGLHA     
10 DPOL_HSVSA/1-4  95.9%  41.4%      ----------------------------------------------------------------------LHNYPHLKS-     
11 DPOD_SOYBN/1-4  93.6%  31.0%      ------------------------------------------------------------------------DARKLNI-     
12 DPOD_CANAL/1-4  93.8%  30.3%      ------------------------------------------------------------------------SIKAFGL-     
13 DPOL_HSV1K/1-5  97.1%  36.1%      -----------------------------------------------------------------------DAVAHLEAG     
14 DPOD_YEAST/1-4  93.8%  31.0%      ------------------------------------------------------------------------TVERLNLK     
15 DPOD_PLAFK/1-4  93.8%  30.8%      ----------------------------------------------------------------------EVSDLQNDD-     
16 DPOD_HUMAN/1-4  93.6%  30.5%      ------------------------------------------------------------------------TAQKLGL-     
17 AD55134|AAD551  97.1%  37.8%      ------------------------------------------------------------------------EAVGGLEA     
18 AB58156|CAB581  93.8%  31.2%      ------------------------------------------------------------------------TAELLKLK     
19 DPOD_DROME/1-4  94.0%  32.5%      -----------------------------------------------------------------------TREKLRQQE     
20 DPOL_HSVE2/1-4  95.9%  41.4%      ----------------------------------------------------------------------LCLHPHLGP-     
21 DPOL_VZVD/1-52  97.1%  36.6%      ------------------------------------------------------------------------TVKRLNP-     
22 DPOA_HUMAN/1-4  92.2%  19.2%      --------------------------------------------------------------------------------     
23 DPOL_CHVP1/1-4  92.8%  26.0%      ------------------------------------------------------------------------RFENVPG-     
24 DPOL_THEGO/1-4  85.4%  22.3%      --------------------------------------------------------------------------------     
25 DPOA_ORYSA/1-5  91.8%  20.6%      --------------------------------------------------------------------------------     
26 DPOL_RSIV/1-50  91.3%  22.3%      PQ----------------------------------------------------YAKQHALGVEIGVLQCNMAALPRRAT     
27 DPOA_YEAST/1-4  92.2%  20.2%      --------------------------------------------------------------------------------     
28 DPOL_METTH/1-4  84.7%  20.4%      --------------------------------------------------------------------------------     
29 DPOA_SCHPO/1-4  89.9%  17.9%      --------------------------------------------------------------------------------     
30 DPOL_ARCFU/1-3  80.4%  21.6%      --------------------------------------------------------------------------------     
31 AA82926|BAA829  95.5%  35.2%      ------------------------------------------------------------------------RKLADLRP     
32 DPOA_DROME/1-4  87.2%  17.5%      --------------------------------------------------------------------------------     
33 AD56202|AAD562  97.3%  37.8%      ------------------------------------------------------------------------AALAGLQP     
34 DPOL_VARV/1-51  95.5%  14.6%      -----------------------------------------------------------------------SSNRLEEEI     
35 DPOL_ASFL6/1-4  93.8%  19.4%      ----------------------------------------------------------------------EANSLMAKGE     
36 DPOA_LEIDO/1-4  94.0%  20.1%      ------------------------------------------------------------------------GSEIDVP-     
37 DPOA_OXYNO/1-5  92.0%  19.3%      -----------------------------------------------------------------------TKNFDGSEM     
38 DPOL_METVO/1-4  83.9%  19.8%      --------------------------------------------------------------------------------     
39 DPOL_ORFN2/1-5  95.7%  14.2%      -----------------------------------------------------------------------SDNRLDAEV     
40 DPOL_NPVOP/1-4  89.1%  18.3%      --------------------------------------------------------------------------------     
41 DPOL_NPVBM/1-4  89.1%  18.6%      --------------------------------------------------------------------------------     
42 DPOL_FOWPV/1-5  93.4%  13.7%      ----------------------------------------------------------------------LNSNKLESEI     
43 DPOL_SULAC/1-4  87.6%  19.1%      -----------------------------------------------------------------------CTKKVWVE-     
44 AB55093|CAB550  88.2%  19.3%      --------------------------------------------------------------------------------     
45 AB57747|CAB577  87.8%  17.7%      -----------------------------------------------------------------------CKKPYEV--     
46 DPOA_TRYBB/1-4  93.2%  20.3%      -----------------------------------------------------------------------NTVSAEVP-     
47 DPO1_SULOH/1-4  86.4%  18.3%      ----------------------------------------------------------------------CKNKEYVRD-     
48 46|DPO2_AERPE/  82.7%  19.6%      ------------------------------------------------------------------------GEEYGEE-     
49 DPOL_BPT4/1-49  88.9%  14.7%      --------------------------------------------------------PSDEYSCSPNGWMYDKHQEGIIPK     
50 DPOL_CBEPV/1-5  95.7%  13.3%      ----------------------------------------------------------------------LQDDEYAVDI     
51 DPOL_THELI/1-4  83.1%  16.4%      --------------------------------------------------------------------------------     
52 DPOL_NPVLD/1-5  89.9%  17.8%      --------------------------------------------------------------------------------     
53 DPO3_SULSH/1-3  78.6%  13.1%      --------------------------------------------------------------------------------     
54 45|DPO1_AERPE/  86.4%  21.3%      --------------------------------------------------------------------------------     
55 DPOL_BPR69/1-5  92.4%  17.8%      --------------------------------------------------------------------APLHDYINAVAE     
56 DPO2_SULSO/1-3  76.3%  11.6%      --------------------------------------------------------------------------------     
57 AF07803|AAF078  92.6%  21.2%      -----------------------------------------------------------------NTLGVS-SYSLDLDV     
58 410720|G410720  92.6%  13.2%      G-----------------------------------------------------NINNDYEKNIHSDAEKNIHSDDDKNI     
59 DPOL_HSVI1/1-4  91.3%  10.3%      ------------------------------------------------------------------------RNKARLD-     
60 AF05246|AAF052  89.7%  16.9%      --------------------------------------------------------------------------------     
61 DPOZ_YEAST/1-4  89.5%  21.2%      --------------------------------------------------------------NLGVSKFSLPRNILALLK     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      ---------------------------------------------------------------EFKFGCTSLRVPPDLL-     
63 DPOL_BPB03/1-3  76.1%   8.9%      --------------------------------------------------------------------------------     
64 DPO2_ECOLI/1-4  79.4%  16.5%      -------------------------------------------------------------------PDPEHSTEGFLD-     
65 AB58420|CAB584  88.0%  13.1%      -------------------------------------------------------QSNAALAELLPDDGTQHDGVVFSP-     
66 AC19148|AAC191  89.7%  11.6%      RKMAWQWRGEFMPASRS----------------------EYHRIQHQLESEKFPPLFPEGPARAFHELSREEQAKYEKRR     
67 AD46482|AAD464  90.5%  11.7%      RKMAWQWRGEFMPASRSEYH----------------RIQHQLESEKFPPLFPEGPARAFHELSREEQAKYEKRRLADYCR     
68 DPOE_YEAST/1-6  88.7%  11.1%      RKLKWAWRGEFFPSKMDEYNMIKRA------LQNETFPNKNKFSKKKVLTFDELSYADQVIHIKKRLTEYSRKVYHRVKV     
69 DPOL_BPPZA/1-4  81.0%   7.7%      --------------------------------------------------------------------------------     
70 DPO1_KLULA/1-5  79.4%  10.8%      PNRNNKSNFFPIRSHNKITYNNFEESTYIA-WYTNVDIDIGLSEGHNIEYIPFDSYGNIGYSWSKKGKIFE---KYIKDV     
71 Q9YQZ6          92.8%  15.8%      ------------------------------------------------------------------------VAQFRGWI     
72 O74719          95.7%   9.3%      ----------------------------------------------------------------------YGSTQYNAWY     
73 DPOM_NEUCR      92.8%  13.0%      -----------------------------------------------------IPVLPCRVKVNGVQKLIFPIGEWTGWY     
74 DPOL_BPPRD      83.7%  11.0%      --------------------------------------------------------------------------------     
75 Q09038          94.6%   8.5%      -----------------------------------------------------------------------NFIDKLYTL     
76 DPO2_KLULA      94.2%   8.1%      -----------------------------------------------------------------------DFIDTLYSM     
77 O78938          96.5%  11.0%      ----------------------------------------------------------------------YKFEILWGYT     
78 O21376          93.4%  10.4%      --------------------------------------------------------------------MVFNSMESPYKK     
79 O99973          88.5%  11.9%      --------------------------------------------------------------------IVKIYKSLKLKD     
80 P78988          95.7%   9.9%      -------------------------------------------------------------------------CIVFDKV     
81 O11414         100.0%   9.7%      -----------------------------------------------------------------WKCKILTSEQLYAVW     
82 S07183          94.2%   9.4%      -----------------------------------------------------------------------ICGYIFDRK     
83 Q83895          99.6%   9.2%      ---------------------------------------------------------------RGWKCKIIKSSEMYAVW     
84 DPOM_NEUIN      94.4%  10.6%      -----------------------------------------------------------------------TRTAFPLGQ     
85 Q96206          88.7%   8.6%      --------------------------------------------------------------------------------     
86 DPOM_PODAN      93.8%   9.5%      -------------------------------------------------------------------YQFNKIDNLFSSY     
87 DPOL_ADEB2     100.0%  10.1%      ----------------------------------------------------------------IDLITLHNRGWAVRIL     
88 DPOL_ADE07     100.0%   9.0%      ------------------------------------------------------------------------RGWRVRIV     
89 DPOM_CLAPU      93.4%   8.8%      -----------------------------------------------------------------------YNFDRVSNV     
90 DPOL_ADEB3     100.0%   9.0%      ------------------------------------------------------------------------RGWRVQIL     
91 Q9YUR6         100.0%   9.6%      ------------------------------------------------------------------------RGWKVNII     
92 Q39432          91.8%  12.3%      -----------------------------------------------------------------------IKGYLFQKR     
93 O62074          98.4%   8.5%      IG----------------------------------------------------------------ILPQRIHKKLMFPV     
94 DPOM_ASCIM      92.0%   9.9%      ------------------------------------------------------------------------IIQTRVQT     
95 DPOM_AGABT      95.5%   9.3%      ---------------------------------------------------------------------TFYEFIPTPDL     
   consensus/100%                    ................................................................................     
   consensus/90%                     ................................................................................     
   consensus/80%                     ................................................................................     
   consensus/70%                     ................................................................................     

                     cov    pid  961          .         .         .         0         .         .         .         . 1040
 1 DPOL_RHCM6/1-4 100.0% 100.0%      -SDVLTV-ELESGLSYRFVKNTVR----------------NSVLSELLTKWVSQRRAVRETMRSCH--------------     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      -DDVFLL-EFDDGTRYGFVREHVR----------------KSILGELLARWLAKRKSVRKVLAECQ--------------     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      -KDVLRV-EIGDQC-HRFVRENVH----------------RSLLAELLVRWLTQRKLVREAMKQCT--------------     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      -ADVYSV-TLENGVTHRFVRASVR----------------VSVLSELLNKWVSQRRAVRECMRECQ--------------     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      -EDVLEV-VVGEATRYRFVREHVR----------------RSLLAELLVRWLKQRKLVRDAMKACG--------------     
 6 DPOL_EBV/1-479  96.9%  43.4%      -EDYESF-RLTGGV-YHFVKKHVH----------------ESFLASLLTSWLAKRKAIKKLLAACE--------------     
 7 AD49652|AAD496  96.9%  47.0%      -SDILTV-KLGDET-HRFVKPCVR----------------ESVLGSLLKDWLAKRREVKAEMQNCS--------------     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      -VDYSTF-EVGDQK-LFFVHAHIR----------------ESLLGILLRDWLAMRKAVRARIPTST--------------     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      -DDILTV-HVGPVT-HRFVKKTVR----------------ESILASLLKKWLDKRKEVKMQMKMCN--------------     
10 DPOL_HSVSA/1-4  95.9%  41.4%      -SDYETF-MLSSGP-IHFVKKHIQ----------------ASLLSRLLTVWLSKRKAIRQKLAECE--------------     
11 DPOD_SOYBN/1-4  93.6%  31.0%      -PPESVN-RTPSGE--TFVKSNLQ----------------KGILPEILEELLTARKRAKADLKEAK--------------     
12 DPOD_CANAL/1-4  93.8%  30.3%      -TEDDYT-KTPNGD--YFVHSNLR----------------KGILPTILDELLTARKKAKADLKKET--------------     
13 DPOL_HSV1K/1-5  97.1%  36.1%      -KDYLEI-EVGGRR-LFFVKAHVR----------------ESLLSILLRDWLAMRKQIRSRIPQSS--------------     
14 DPOD_YEAST/1-4  93.8%  31.0%      -IDEDYV-ITPNGD--YFVTTKRR----------------RGILPIILDELISARKRAKKDLRDEK--------------     
15 DPOD_PLAFK/1-4  93.8%  30.8%      -----IT-TIQGKNNLKFVKKNVK----------------KGILPLIVEELIEARKKVKLLIKNEK--------------     
16 DPOD_HUMAN/1-4  93.6%  30.5%      -TEDQFI-RTPTGD--EFVKTSVR----------------KGLLPQILENLLSARKRAKAELAKET--------------     
17 AD55134|AAD551  97.1%  37.8%      GRDYMEI-TVGGDT-VYFVKAHVR----------------ESLLSILLRDWLAMRKQIRAHIPSSA--------------     
18 AB58156|CAB581  93.8%  31.2%      -QDVDYS-VTPNGD--YFVKPHVR----------------KGLLPIILADLLNARKKAKADLKKET--------------     
19 DPOD_DROME/1-4  94.0%  32.5%      NLQDDQV-ERTPAN-NYFVKSEVR----------------RGLLPEILESLLAARKRAKNDLKVET--------------     
20 DPOL_HSVE2/1-4  95.9%  41.4%      -GDYETF-ELASGP-VHFVKKHKA----------------VSLLATLLNVWLAKRKAIRRELATVS--------------     
21 DPOL_VZVD/1-52  97.1%  36.6%      -SDYATF-TVGGKR-LFFVRSNVR----------------ESLLGVLLKDWLAMRKAIRARIPGSS--------------     
22 DPOA_HUMAN/1-4  92.2%  19.2%      -SEAQKV-TEDGEQEQIPELPDPS--------------LEMGILPREIRKLVERRKQVKQLMKQQD--------------     
23 DPOL_CHVP1/1-4  92.8%  26.0%      -VEYYEI-ETGLGK--FKYAQKNDET-----------GEGQGVVPALLDDLAKFRKLAKKHMAEAKR-------------     
24 DPOL_THEGO/1-4  85.4%  22.3%      ----CEE-YDVAPQVGHKFCKDFP-----------------GFIPSLLGDLLEERQKVKKKMKATI--------------     
25 DPOA_ORYSA/1-5  91.8%  20.6%      -----------DGNVPNLPASKTT-----------------GVLPELLKSLVERRRMVKSWLKTAS--------------     
26 DPOL_RSIV/1-50  91.3%  22.3%      QERARMR-ERISEMKIQYASMTPSVVKCNVFSF-RFTHAHEGVLPRVLRNLLESRARVRARIKTTD--------------     
27 DPOA_YEAST/1-4  92.2%  20.2%      --------KEDIDELPSVPPSEVD----------------QGVLPRLLANLVDRRREVKKVMKTET--------------     
28 DPOL_METTH/1-4  84.7%  20.4%      ----ESE-CYVAPEYGYRFRKSPR-----------------GFVPSVIGEILSERVRIKEEMKGSD--------------     
29 DPOA_SCHPO/1-4  89.9%  17.9%      -----SN-SDSDDQIPDTPSASAN----------------QGIFPRLIANLVERRRQIKGLLKDNS--------------     
30 DPOL_ARCFU/1-3  80.4%  21.6%      ------D-CYEAPEVGHKFRKSPD-----------------GFFKRILRMLIEKRRELKVELKNLS--------------     
31 AA82926|BAA829  95.5%  35.2%      -RDDYME-IDVQGKSLHFAKPHIR----------------ESLLGILLKDWLAMRKAIRAKIPASS--------------     
32 DPOA_DROME/1-4  87.2%  17.5%      ----------DADELPTLPDSKTE----------------PGILPLQLKRLVESRKEVKKLMAAP---------------     
33 AD56202|AAD562  97.3%  37.8%      -EKDFFQ-IDVQGRKFYFVREHIR----------------KSLLSDLLGDWLSMRKAVRAKIKTAE--------------     
34 DPOL_VARV/1-51  95.5%  14.6%      NNQLLLQ-KYPPPR-YITVHCEPRLPNLISEIA-IFDRSIEGTIPRLLRTFLAERARYKKMLKQAT--------------     
35 DPOL_ASFL6/1-4  93.8%  19.4%      SLHYVSF-HFNNRLVEGWFVRHNN------------VPDKMGLYPKVLIDLLNKRTALKQELKKLGEKKECI--------     
36 DPOA_LEIDO/1-4  94.0%  20.1%      -PPENLI-CASCAAAGLSAPCLHK-----------------CVLPKVIKSLVDSRREVKRLMKIEK--------------     
37 DPOA_OXYNO/1-5  92.0%  19.3%      KNQYKKG-ENGEEE-VDIEEADLPDK---------NVNLKDAVLPMVLRDLVQKRKAVKDKMKTEK--------------     
38 DPOL_METVO/1-4  83.9%  19.8%      -----------------KERENME----------------LGIIPKTLNELLSRRKHIKMLLKDKI--------------     
39 DPOL_ORFN2/1-5  95.7%  14.2%      AAVDVRR-MFPAPR-YIAVPCEPRSPELVAEVA-IFDREAKGIIPMLLRSFLDARAKYKKLMKAAE--------------     
40 DPOL_NPVOP/1-4  89.1%  18.3%      -----------DGN--VYLNQDKQ-----------------AINVQLLLQLLKQRSELKKCRDSQT--------------     
41 DPOL_NPVBM/1-4  89.1%  18.6%      -----------DGN--VYLNHNSR-----------------AIVVKLLLKLLSERCKFKKNRDNQS--------------     
42 DPOL_FOWPV/1-5  93.4%  13.7%      NMRTIKS-KYPYPE-YVCVSCESRLSDYYSEII-VYDRREKGIIPKLLEMFIGKRKEYKNLLKTAS--------------     
43 DPOL_SULAC/1-4  87.6%  19.1%      ---------DETGEKLHYVCMDKP-----------------GITAVYQGLIRDFRVKVYKKKAKYS--------------     
44 AB55093|CAB550  88.2%  19.3%      ----------DSDE-QLSVPQSTD---------------IEGVLPREIRKLVECRRDVKSLMKSER--------------     
45 AB57747|CAB577  87.8%  17.7%      --------KDETGEVLHIVCMDRP-----------------GITAVITGLLRDFRVKIYKKKAKNP--------------     
46 DPOA_TRYBB/1-4  93.2%  20.3%      -PPESLI-CLSCRA-AGLPSPCLH----------------KCILPKVIRGLVDSRREIKRMMKSEK--------------     
47 DPO1_SULOH/1-4  86.4%  18.3%      ----------ETGEVLHYICKDKP-----------------GITAVITGLLRDFRVKVYKKKAKSQ--------------     
48 46|DPO2_AERPE/  82.7%  19.6%      ------E-VYTAPEVGHKFRKSPP-----------------GFFKKILERFLSWRRQIRSEMKKHP--------------     
49 DPOL_BPT4/1-49  88.9%  14.7%      EIAKVFF-QRKDWKKKMFAEEMNAEAIK--------KIIMKGAGSCSTKPEVERYVKFSDDFLNELSNYTE---------     
50 DPOL_CBEPV/1-5  95.7%  13.3%      VENYLKE-KYPYPDYCYMLIKKDKTYKFIVMD-----RRKPGIITQMIDKGMKSKNEYKNLKNINK--------------     
51 DPOL_THELI/1-4  83.1%  16.4%      ----CKN-YDVAPIVGYRFCKDFP-----------------GFIPSILGDLIAMRQDIKKKMKSTI--------------     
52 DPOL_NPVLD/1-5  89.9%  17.8%      ----------SDGN--VYLDKNVN-----------------AVNPKLLKTLSEMRVRYKGLRDQCE--------------     
53 DPO3_SULSH/1-3  78.6%  13.1%      ----CDD-CYVSTISNYKFKKEPS-----------------GLYKTFLEELSNIQ-------------------------     
54 45|DPO1_AERPE/  86.4%  21.3%      ----CRD-TIEVPEVGHRVCREFK-----------------GISNEIVGMLRDFRVRLYKKKSKDK--------------     
55 DPOL_BPR69/1-5  92.4%  17.8%      RPSDVYS-CSPNGM---MYYKDRD-----------------GVVPTEITKVFNQRKEHKGYMLAAQRNGEIIKEALHNPN     
56 DPO2_SULSO/1-3  76.3%  11.6%      ----------DIKTELHSICLKEK-----------------GIIPEALQWLIERKSELKKID------------------     
57 AF07803|AAF078  92.6%  21.2%      -LQDLNQ-ILQTPNSVMYVPPEVR----------------RGILPRLLEEILSTRIMVKKAMKKLT--------------     
58 410720|G410720  92.6%  13.2%      HSDDEKN-YDNDKS-YNKLEDDNLLE-NNVEID-EFDRSKPGILPCILKSLVEKRSVIKKLISNEK--------------     
59 DPOL_HSVI1/1-4  91.3%  10.3%      -AG-IVM-ATDYIRNSLFTPETIPRR--------------GGFVMAPLTGLFFARP--TQCFELCL--------------     
60 AF05246|AAF052  89.7%  16.9%      -------------DGYLYLQKNKN-----------------AITTKFLQEQAGKRAGWKAEMKKFP--------------     
61 DPOZ_YEAST/1-4  89.5%  21.2%      -ND-----VTIAPNGVVYAKTSVR----------------KSTLSKMLTDILDVRVMIKKTMNEIG--------------     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      -YQVRHD-ITVSPNGVAFVKPSVR----------------KGVLPRMLEEILKTRFMVKQSMKAYK--------------     
63 DPOL_BPB03/1-3  76.1%   8.9%      --------KYEKDEQYPLYIQRIR-------------------FEFELKEGYIPTIQIKKNPFFKG--------------     
64 DPO2_ECOLI/1-4  79.4%  16.5%      ----------------AWFSREKH------------------CLPEIVTNIWHGRDEAKRQG------------------     
65 AB58420|CAB584  88.0%  13.1%      -----------NGA--MFVPPSTR----------------VGLLPQMVQAVLDTRFEVQAALKHIAV-------------     
66 AC19148|AAC191  89.7%  11.6%      LADYCRK-AYKKIH-ITKVEERLTTIC----------QRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVE------     
67 AD46482|AAD464  90.5%  11.7%      -KAYKKI-HVTKVEERLTTICQRE----------------NSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVE------     
68 DPOE_YEAST/1-6  88.7%  11.1%      SEIVERE-AIVCQRENPFYVDTVK-------------------------SFRDRRYEFKGLAKTWKGNLSKI--------     
69 DPOL_BPPZA/1-4  81.0%   7.7%      --------KYVWDEDYPLHIQHIR-------------------CEFELKEGYIPTIQIKRSRFYKG--------------     
70 DPO1_KLULA/1-5  79.4%  10.8%      -LYKLKI-KYEKQN--NKVKRNVI------------KIIMNSLWGKFAQKWVNFEYFIKSEDDIDF--------------     
71 Q9YQZ6          92.8%  15.8%      VFDWRQI-EEGFGLASLMYTPSKR--------------RFLTTTTGSLNSYLSMRANHKQAMTQAG--------------     
72 O74719          95.7%   9.3%      TSVDIDI-GISEGHDIQYIPFDEE----------------ENIGYSWINKGKIFQQYIEDTLYKLK--------------     
73 DPOM_NEUCR      92.8%  13.0%      FSEELKL-AVEYGYKIEVLESYVFEK-------------RDDPFKEYIEHFASIKDNTKGSKKQMAKLLLNTLYG-----     
74 DPOL_BPPRD      83.7%  11.0%      --HFFSK-RDAAKKAGDLFHNIFY----------------KLILNSSYGKFAQNPENYKEWCITEG--------------     
75 Q09038          94.6%   8.5%      KDIHTNCKCKEQPCPIRMVAKIALN---------------GGGYGKFVQKPIDKEVYIVKRDVVAG--------------     
76 DPO2_KLULA      94.2%   8.1%      KETHTACSCEEQPCPIRMVAKIALN---------------GGGYGKFVQKPIDKEIYIVKRDVVAG--------------     
77 O78938          96.5%  11.0%      FESKNIFSEIISDLYKMRLEYQKSD--------------PMNYIAKILMNSLYGRFGMDDNFTFSDIMD-----------     
78 O21376          93.4%  10.4%      YMDLFYSRKSNAKGIYRTLYKSTLNNLLGRFSL-APMNYKDAMMDNTTFKMLSLLHNITNMLEMKDFDVK----------     
79 O99973          88.5%  11.9%      PNLYLENTYWTCSRKDKRLRCKIDP---------------SEILYKLNMNSLYGRFAMKNESTENIFVN-----------     
80 P78988          95.7%   9.9%      EEQFDSYIKNIYSKKLQAEKEKNE---------------IQRLLNKLLMNSLYGRLGIKDNNNNLK--------------     
81 O11414         100.0%   9.7%      PEWKCITKEYVSINIAAKEKADKDKN--------MTQRSISKLLSNALYGSFATRLDNKKVVFANSMEKGDMERIANG--     
82 S07183          94.2%   9.4%      ESPFKRFVYDIYSKRLDAKAKGEK---------------ALDFIYKITMNSLYGRFGISPESTTTQ--------------     
83 Q83895          99.6%   9.2%      SDWKPLCQKYVKVNIMAKEKASKSNN--------KIQRSISKLLSNALYGSFATRIDKKKVVFAENIEEKDKKRLENG--     
84 DPOM_NEUIN      94.4%  10.6%      WEGWYFSEEILNAMKHGYEFEFIEG--------------YLFEESSMFDEYIDLLYNIKKNSPKES--------------     
85 Q96206          88.7%   8.6%      -----VDWELIKKHYDIFEEEFIGG-------------FMFKGFIGFFDEYIDRFMEIKNSPDSSA--------------     
86 DPOM_PODAN      93.8%   9.5%      VDDLYKIKANSEGSEKLITKFLLN-----------------SLLGRFGMSIFKLKTDIVSVEKAKKLAVTNYIN------     
87 DPOL_ADEB2     100.0%  10.1%      PDERTTIFPEWKCVAKEYVQLNIGAKEKADKEKNQTMRSIAKLLSNALYGSFATKLDNKKIVFSDQLEASASKTIARG--     
88 DPOL_ADE07     100.0%   9.0%      PDELTTIFPEWKCVAREYVQLNIAAKERADKEKNQTMRSIAKLLSNALYGSFATKLDNKKIVFSDQMDESLIKGISAGTV     
89 DPOM_CLAPU      93.4%   8.8%      FNEFVQEVYKVKCNPNNVTEKNIA----------------KLILNSLIGRFGMNINKIKTSLVPSEK-------------     
90 DPOL_ADEB3     100.0%   9.0%      NDPRTTVFPQWECLARDYVQLNIAAKERADKEKNQTLRSIAKLLSNALYGSFATKLDNRVTVFSDQMEDKYVRGISDG--     
91 Q9YUR6         100.0%   9.6%      PHKLNTVFPTWNTCCLEYVTKNILAKEKATVEKNPVKRAISKLLSNALYGSFATRESNDITIFENHIQENPKIRNQLLN-     
92 Q39432          91.8%  12.3%      ESPFKDYVGSLFERRLQAKEDGNE---------------AMSLLYKLVMNSLYGRFGIHPKSTKTDIGG-----------     
93 O62074          98.4%   8.5%      CTWTTDEVKKAVSKGYRVLKYHAIMHWDDD------KWVKGGFLADYIKPLLAIKHQSSGWPKDDMT-------------     
94 DPOM_ASCIM      92.0%   9.9%      SGGVRTVAPIGTFKGWYLLDELIN-------------AKKYGYTFKISEAYLFERLNIFKEYIHRLY-------------     
95 DPOM_AGABT      95.5%   9.3%      KQGLEYGYKFEVICGINFPDACGN----------------GELFSEFVNHFYEIKSSSTDLGQKYIAKLS----------     
   consensus/100%                    ................................................................................     
   consensus/90%                     .................h.......................thh...h...h..p..hpt....................     
   consensus/80%                     .............t...hht.p.t.................shhsthltthht.+hth+t.h.t.t..............     
   consensus/70%                     ...........tsp..hhhptphp.................ulhsphltphhttRhth+t.htttt..............     

                     cov    pid 1041          :         .         .         .         .         1         .         . 1120
 1 DPOL_RHCM6/1-4 100.0% 100.0%      -----------------------------------DPVK--RMLLDKEQLALKVTCNAF--------------------Y     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      -----------------------------------DEVE--KLILDKYQLALKVTCNAF--------------------Y     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      -----------------------------------NEMQ--RMIMDKQQLALKVTCNAF--------------------Y     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      -----------------------------------DPVR--RMLLDKEQMALKVTCNAF--------------------Y     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      -----------------------------------DEKQ--RMFMDKQQLALKVTCNAF--------------------Y     
 6 DPOL_EBV/1-479  96.9%  43.4%      -----------------------------------DPRQ--RTILDKQQLAIKCTCNAV--------------------Y     
 7 AD49652|AAD496  96.9%  47.0%      -----------------------------------DPMM--KLLLDKKQLALKTTCNSV--------------------Y     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      ------------------------------------PEE--AVLLDKQQSAIKVICNSV--------------------Y     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      -----------------------------------NPVM--EMLLDKKQLALKTTCNSV--------------------Y     
10 DPOL_HSVSA/1-4  95.9%  41.4%      -----------------------------------DLDT--KTILDKQQLAIKVTCNAV--------------------Y     
11 DPOD_SOYBN/1-4  93.6%  31.0%      -----------------------------------DPLE--KAVLDGRQLALKISANSV--------------------Y     
12 DPOD_CANAL/1-4  93.8%  30.3%      -----------------------------------DPFK--KDVLNGRQLALKISANSV--------------------Y     
13 DPOL_HSV1K/1-5  97.1%  36.1%      ------------------------------------PEE--AVLLDKQQAAIKVVCNSV--------------------Y     
14 DPOD_YEAST/1-4  93.8%  31.0%      -----------------------------------DPFK--RDVLNGRQLALKISANSV--------------------Y     
15 DPOD_PLAFK/1-4  93.8%  30.8%      -----------------------------------NNIT--KMVLNGRQLALKISANSV--------------------Y     
16 DPOD_HUMAN/1-4  93.6%  30.5%      -----------------------------------DPLR--RQVLDGRQLALKVSANSV--------------------Y     
17 AD55134|AAD551  97.1%  37.8%      ------------------------------------PEE--AVLLDKQQAAIKVVCNSV--------------------Y     
18 AB58156|CAB581  93.8%  31.2%      -----------------------------------DPFK--KAVLDGRQLALKVSANSV--------------------Y     
19 DPOD_DROME/1-4  94.0%  32.5%      -----------------------------------DPFK--RKVLDGRQLALKISANSV--------------------Y     
20 DPOL_HSVE2/1-4  95.9%  41.4%      -----------------------------------DEAV--RTILDKQQLAIKVTCNAV--------------------Y     
21 DPOL_VZVD/1-52  97.1%  36.6%      ------------------------------------SDE--AVLLDKQQAAIKVVCNSV--------------------Y     
22 DPOA_HUMAN/1-4  92.2%  19.2%      ----------------------------------LNPDL--ILQYDIRQKALKLTANSM--------------------Y     
23 DPOL_CHVP1/1-4  92.8%  26.0%      ---------------------------------NGDDFK--EALYDAQQRSFKVVMNSV--------------------Y     
24 DPOL_THEGO/1-4  85.4%  22.3%      -----------------------------------DPIE--KKLLDYRQRAIKILANSF--------------------Y     
25 DPOA_ORYSA/1-5  91.8%  20.6%      ------------------------------------GLK--RQQFDIQQQALKLTANSM--------------------Y     
26 DPOL_RSIV/1-50  91.3%  22.3%      -----------------------------------DPDI--RAVLDKKQLAYKISANSV--------------------Y     
27 DPOA_YEAST/1-4  92.2%  20.2%      -----------------------------------DPHK--RVQCDIRQQALKLTANSM--------------------Y     
28 DPOL_METTH/1-4  84.7%  20.4%      -----------------------------------DPME--RKILNVQQEALKRLANTM--------------------Y     
29 DPOA_SCHPO/1-4  89.9%  17.9%      ----------------------------------ATPTQ--RLQWDIQQQALKLTANSM--------------------Y     
30 DPOL_ARCFU/1-3  80.4%  21.6%      ----------------------------------PESSE--YKLLDIKQQTLKVLTNSF--------------------Y     
31 AA82926|BAA829  95.5%  35.2%      -----------------------------------DDTA---VLLDKQQAAIKVVCNSV--------------------Y     
32 DPOA_DROME/1-4  87.2%  17.5%      -----------------------------------DLSPELQMQYHIRQMALKLTANSM--------------------Y     
33 AD56202|AAD562  97.3%  37.8%      -----------------------------------TEEE--RILLDKQQAALSCL-ELC--------------------Y     
34 DPOL_VARV/1-51  95.5%  14.6%      -----------------------------------SSTE--KAIYDSMQYTYKIIANSV--------------------Y     
35 DPOL_ASFL6/1-4  93.8%  19.4%      ----------------------------HESHPGFKELQFRHAMVDAKQKALKIFMNTF--------------------Y     
36 DPOA_LEIDO/1-4  94.0%  20.1%      -----------------------------------DANN--LALLEIRQKALKLTANSM--------------------Y     
37 DPOA_OXYNO/1-5  92.0%  19.3%      -----------------------------------DHVK--LSQLEIRQKAIKLTANSM--------------------Y     
38 DPOL_METVO/1-4  83.9%  19.8%      ---------------------------------QKNEFDEEYSRLEHEQKSIKVLANSH--------------------Y     
39 DPOL_ORFN2/1-5  95.7%  14.2%      -----------------------------------TAVD--REIYNSMQYTYKITANSV--------------------Y     
40 DPOL_NPVOP/1-4  89.1%  18.3%      ----------------------------------ESEFL--YDLYDQMQNLSKRTANSI--------------------Y     
41 DPOL_NPVBM/1-4  89.1%  18.6%      ----------------------------------ESAFL--YDLYDQKQNSVKRTANSI--------------------Y     
42 DPOL_FOWPV/1-5  93.4%  13.7%      -----------------------------------TTIE--STLYDSLQYIYKIIANSV--------------------Y     
43 DPOL_SULAC/1-4  87.6%  19.1%      -----------------------------------NISEEQRSLYDVVQRAMKVFINAT--------------------Y     
44 AB55093|CAB550  88.2%  19.3%      -----------------------------------NEAK--KKQMDIRQMALKLTANSM--------------------Y     
45 AB57747|CAB577  87.8%  17.7%      -----------------------------------NNSEEQKLLYDVVQRAMKVFINAT--------------------Y     
46 DPOA_TRYBB/1-4  93.2%  20.3%      -----------------------------------DPGN--LAMLEIRQLALKLTANSM--------------------Y     
47 DPO1_SULOH/1-4  86.4%  18.3%      -----------------------------------NISEEQRSVYDVVQRAMKVFINAT--------------------Y     
48 46|DPO2_AERPE/  82.7%  19.6%      ----------------------------------PDSPE--YKLLDERQKAIKLLANAS--------------------Y     
49 DPOL_BPT4/1-49  88.9%  14.7%      ----------------------------SVLNSLIEECEKAATLANTNQLNRKILINSL--------------------Y     
50 DPOL_CBEPV/1-5  95.7%  13.3%      ----------------------------------NNPVL--YNYYTSALYSKKITINSL--------------------Y     
51 DPOL_THELI/1-4  83.1%  16.4%      -----------------------------------DPIE--KKMLDYRQRAIKLLANSILPNEWLPIIE----------N     
52 DPOL_NPVLD/1-5  89.9%  17.8%      ----------------------------------YNSFY--YKLYDKIQNALKRIANSI--------------------Y     
53 DPO3_SULSH/1-3  78.6%  13.1%      -----------------------------------D---------TRKSKVIEELMSSF--------------------Y     
54 45|DPO1_AERPE/  86.4%  21.3%      -----------------------------------SLREEERLWYDVVQSAMKVYINAS--------------------Y     
55 DPOL_BPR69/1-5  92.4%  17.8%      LSVDEPLDVDYRFDFSDEIKEKIKKLSAKSLNEMLFRAQRTEVAGMTAQINRKLLINSL--------------------Y     
56 DPO2_SULSO/1-3  76.3%  11.6%      ---------------------------------------------EERAEAIKWILVAS--------------------F     
57 AF07803|AAF078  92.6%  21.2%      ---------------------------------PSEAVL--HRIFNARQLALKLIANVT--------------------Y     
58 410720|G410720  92.6%  13.2%      -----------------------------------NKEK--KELLLIQSLSIKLISNSI--------------------Y     
59 DPOL_HSVI1/1-4  91.3%  10.3%      ---------------------------------------DFTSMYPSMMCDLNISPETI--------------------V     
60 AF05246|AAF052  89.7%  16.9%      ------------------------------------NNSFMYFLFDSWQNAAKLNCNSQ--------------------Y     
61 DPOZ_YEAST/1-4  89.5%  21.2%      -----------------------------------DDNTTLKRLLNNKQLALKLLANVT--------------------Y     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      ------------------------------------QDRALSRMLDARQLGLKLIANVT--------------------F     
63 DPOL_BPB03/1-3  76.1%   8.9%      ----------------------------------------NEYLKNSGAEPVELYLTNV--------------------D     
64 DPO2_ECOLI/1-4  79.4%  16.5%      --------------------------------------------NKPLSQALKIIMNAF--------------------Y     
65 AB58420|CAB584  88.0%  13.1%      ----------------------------------PSGDITMQQRLQEQQLALKMLANVT--------------------Y     
66 AC19148|AAC191  89.7%  11.6%      ----------------------------VGDAAEVKRCKNMEVLYDSLQLAHKCILNSF--------------------Y     
67 AD46482|AAD464  90.5%  11.7%      ----------------------------VGDASEVKRCKNMEILYDSLQLAHKCILNSF--------------------Y     
68 DPOE_YEAST/1-6  88.7%  11.1%      ---------------------------DPSDKHARDEAKKMIVLYDSLQLAHKVILNSF--------------------Y     
69 DPOL_BPPZA/1-4  81.0%   7.7%      ----------------------------------------NEYLKSSGGEIADLWVSNV--------------------D     
70 DPO1_KLULA/1-5  79.4%  10.8%      ------------------------------------ESEEAYKIWDTDFMLIKKIKEST---------------------     
71 Q9YQZ6          92.8%  15.8%      ------------------------------------DNKALYSYHDIQQSEMKVCANSH--------------------Y     
72 O74719          95.7%   9.3%      -------------------------------------LKYEEEGNKVKRNVIKIIMNSLWG-----------------KF     
73 DPOM_NEUCR      92.8%  13.0%      ------------------------------RTGMNDSAAEIKMLTTNELDNIQLTNNVIH------------------EF     
74 DPOL_BPPRD      83.7%  11.0%      --------------------------------------GIYLEGYDGEGCEVQEHLDYIL-------------------W     
75 Q09038          94.6%   8.5%      ------------------------------------ECENLSQNENGEICIGKRIVKKPK------------------FF     
76 DPO2_KLULA      94.2%   8.1%      ------------------------------------ECDKLQENENGEICIGKRLVKRP------------------LFY     
77 O78938          96.5%  11.0%      -----------------------------------KDDYFNFEKLDRNNSILDVTELNN--------------------N     
78 O21376          93.4%  10.4%      --------------------------------MCHVEKEIKYTPDNMPEYVNKVRNSEFYTN---------------ALK     
79 O99973          88.5%  11.9%      ---------------------------------KSDIESLNKYIESEEFRNFRDFGEKY--------------------L     
80 P78988          95.7%   9.9%      ----------------------------------IVKQDTIKKGLETENSDILSESNNLYLVKSQGP----------LDP     
81 O11414         100.0%   9.7%      -----------------KATITAQTTVINTCLPKKDTTSWERFFSNLPQTTALPVAPSTENEG--------------NDI     
82 S07183          94.2%   9.4%      ----------------------------------IVSTEESRKLALYNDGFVQSYELSS--------------------D     
83 Q83895          99.6%   9.2%      ------------------SAEITSYTTVISKSLPKRSFEWNQYFSNLPEMPPKDSKDTNEN------------------F     
84 DPOM_NEUIN      94.4%  10.6%      -----------------------------------PWYYISKLLMNSLYGRFGLNPEGEE-------------------I     
85 Q96206          88.7%   8.6%      -----------------------------------EQSLQAKLMLNSLYGKFATNPDITGKVPYL------------DEN     
86 DPOM_PODAN      93.8%   9.5%      ----------------------SVKAISDTDVLISYNKEISRKLVEEHGLNYIEILNSN--------------------S     
87 DPOL_ADEB2     100.0%  10.1%      -----------------------------------NFSIKSSSFIETDNFSAEIMPEFVVTYPPAPSAELDESDE-NEEH     
88 DPOL_ADE07     100.0%   9.0%      NI------------KSSSFLETDNLSAEVMPAFEREYLPQQLALLDSDPEDSEDEQRSAP------------------FY     
89 DPOM_CLAPU      93.4%   8.8%      ----------------------------------HNELLTTRVVKSTTDLGSGMFMDIYVPGIDKNICEDFNLDY-IEVL     
90 DPOL_ADEB3     100.0%   9.0%      ----------------------TYDIKSTAFVETDNLSSSVMAELKITYSPVKQQTDATRKHRQCTPTSNSSSDEDAPFY     
91 Q9YUR6         100.0%   9.6%      ------------------------KQLTIDSITTLPTYNLPYVSIENLTFTLKNRTDSAERN-------------LELDD     
92 Q39432          91.8%  12.3%      -------------------------------IKEYQYRMRQESWLDGDYLGNDKYVLSY--------------------H     
93 O62074          98.4%   8.5%      -----------------------------------QDEKQEHIDNIFKKDGVKLDINMVKPNK------------ALRSL     
94 DPOM_ASCIM      92.0%   9.9%      ------------------------------------TIKSSYTPDDPMYFIAKLLMNSLYG-----------------RF     
95 DPOM_AGABT      95.5%   9.3%      -----------------------------------LNSLYGKFGQKEREYSIRLLEKDKAKEIISKN-----------HY     
   consensus/100%                    ................................................................................     
   consensus/90%                     .............................................p.....hp...p.......................     
   consensus/80%                     ...........................................hhs..p.sh+hhhssh....................a     
   consensus/70%                     ...................................p..t..thhhctpphshKhhhNuh....................Y     

                     cov    pid 1121          .         .         :         .         .         .         .         2 1200
 1 DPOL_RHCM6/1-4 100.0% 100.0%      GFTGVVNG--MMP----CLPIA----ASITRIGR----------------DMLMRTSQFVEENFAEPCFLHNFFNREDYS     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      GFTGVSSG--MMP----CLPIA----AAITRIGR----------------DMLMSVVDYVNTYMGHAEFWLRYLGEEDLT     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      GFTGVAAG--MLP----CLPIA----ASITKIGR----------------DMLLATAGHIEDRCNRPDFLRTVLGLPPEA     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      GFTGVVNG--MMP----CLPIA----ASITRIGR----------------DMLERTARFIKDNFSEPCFLHNFFNQEDYV     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      GFTGVAAP--MLP----CLPIA----ASITKIGR----------------DMLLATSAYMERHCNDVEFLVSEVGVPREA     
 6 DPOL_EBV/1-479  96.9%  43.4%      GFTGVANG--LFP----CLSIA----ETVTLQGR----------------TMLERAKAFVEALSPANLQALAPSPDAWAP     
 7 AD49652|AAD496  96.9%  47.0%      GVTGAAHG--LLP----CVAIA----ASVTCLGR----------------EMLCSTVDYVNSKMQSEQFFCEELGLTASD     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      GFTGVANG--LLP----CLRIA----ATVTTIGR----------------DMLLKTRDYVHSRWATRELLEDNFPGAIGF     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      GVTGATHS--LLP----CVAIA----ASVTCLGR----------------EMLCKTVDYVDSAMYSDTFFIEKFGLTRGD     
10 DPOL_HSVSA/1-4  95.9%  41.4%      GFTGVASG--LLP----CISIA----ETVTLQGR----------------TMLEKSKIFIEAMTPDTLQEIV---PHIVK     
11 DPOD_SOYBN/1-4  93.6%  31.0%      GFTGATIG--QLP----CLEIS----SSVTSYGR----------------QMIEHTKKLVEDKF--------------TT     
12 DPOD_CANAL/1-4  93.8%  30.3%      GFTGATVG--KLP----CLAIS----SSVTAFGR----------------EMIEKTKNEVQEYYSKK-----------NG     
13 DPOL_HSV1K/1-5  97.1%  36.1%      GFTGVQHG--LLP----CLHVA----ATVTTIGR----------------EMLLATREYVHARWAAFEQLLADFPEAADM     
14 DPOD_YEAST/1-4  93.8%  31.0%      GFTGATVG--KLP----CLAIS----SSVTAYGR----------------TMILKTKTAVQEKYCIK-----------NG     
15 DPOD_PLAFK/1-4  93.8%  30.8%      GYTGASSGG-QLP----CLEVA----VSITTLGR----------------SMIEKTKERVESFYCKS-----------NG     
16 DPOD_HUMAN/1-4  93.6%  30.5%      GFTGAQVG--KLP----CLEIS----QSVTGFGR----------------QMIEKTKQLVESKYTVE-----------NG     
17 AD55134|AAD551  97.1%  37.8%      GFTGVQRG--LLP----CLPVA----ATVTTIGR----------------DMLLATRDYVHSRWVSFDGLVMDFPEAAAI     
18 AB58156|CAB581  93.8%  31.2%      GFTGATNG--RLP----CLAIS----SSVTSYGR----------------QMIEKTKDVVEKRY-----------RIENG     
19 DPOD_DROME/1-4  94.0%  32.5%      GFTGAQVG--KLP----CLEIS----GSVTAYGR----------------TMIEMTKNEVESHYTQANGYEN--------     
20 DPOL_HSVE2/1-4  95.9%  41.4%      GFTGVASG--ILP----CLKIA----ETVTFQGR----------------RMLENSKRYIEGV--TPEGLADILGRRVEC     
21 DPOL_VZVD/1-52  97.1%  36.6%      GFTGVAQG--FLP----CLYVA----ATVTTIGR----------------QMLLSTRDYIHNNWAAFERFITAFPDIESS     
22 DPOA_HUMAN/1-4  92.2%  19.2%      GCLGFSYS--RFY----AKPLA----ALVTYKGR----------------EILMHTKEMVQKMN----------------     
23 DPOL_CHVP1/1-4  92.8%  26.0%      GFLGASKG--FIP----CVPIA----ASVTATGR----------------KMIEHTAKRAVELLP---------------     
24 DPOL_THEGO/1-4  85.4%  22.3%      GYYGYAKA--RWY----CKECA----ESVTAWGR----------------QYIETTIREIEEKF----------------     
25 DPOA_ORYSA/1-5  91.8%  20.6%      GCLGFSNS--RFY----AKPLA----ELITLQGR----------------EILQNTVDLVQNNL----------------     
26 DPOL_RSIV/1-50  91.3%  22.3%      GTMGTQRG--YLP----FMAGA----MTTTYCGR----------------KLIEKAAHLLKTVV----------------     
27 DPOA_YEAST/1-4  92.2%  20.2%      GCLGYVNS--RFY----AKPLA----MLVTNKGR----------------EILMNTRQLAESMN----------------     
28 DPOL_METTH/1-4  84.7%  20.4%      GVYGYSRF--RWY----SMECA----EAITAWGR----------------DYIKKTIKTAEEFG----------------     
29 DPOA_SCHPO/1-4  89.9%  17.9%      GCLGYTKS--RFY----ARPLA----VLITYKGR----------------EALMNTKELADQMG----------------     
30 DPOL_ARCFU/1-3  80.4%  21.6%      GYMGWNLA--RWY----CHPCA----EATTAWGR----------------HFIRTSAKIAESMG----------------     
31 AA82926|BAA829  95.5%  35.2%      GFCGVANG--LLP----CIDVA----ATVTTIGR----------------DMLLTVRDYVKVKWGTRDALLREFPALTNY     
32 DPOA_DROME/1-4  87.2%  17.5%      GCLGFAHS--RFF----AQHLA----ALVTHKGR----------------D-LTNTQQLVQKMN----------------     
33 AD56202|AAD562  97.3%  37.8%      GFTGVMHG--MLP----CLEVA----STVTAIGR----------------DMLLRTKAHIEKEWRSGNQFAEKFLPGSER     
34 DPOL_VARV/1-51  95.5%  14.6%      GLMGFRNS--ALY----SYASA----KSCTSIGR----------------RMILYLESVLNGAELSNGMLRFANPLSNPF     
35 DPOL_ASFL6/1-4  93.8%  19.4%      GEAGNNLS--PFF----LLPLA----GGVTSSGQ----------------YNLKLVYNFVINKG----------------     
36 DPOA_LEIDO/1-4  94.0%  20.1%      GCLGFEYS--RFH----AQPLA----ELVTRQGR----------------LALQSTVDLIPQLNP---------------     
37 DPOA_OXYNO/1-5  92.0%  19.3%      GCLGFGSS--RFH----AQAIA----ALITRTGR----------------ETLLRTKDIAENKL----------------     
38 DPOL_METVO/1-4  83.9%  19.8%      GYLAFPMA--RWY----SDKCA----EMVTGLGR----------------KYIQETIEKAEEFG----------------     
39 DPOL_ORFN2/1-5  95.7%  14.2%      GLMGFRNS--ALF----SYASA----KSCTAIGR----------------TMIAYLERTLDGASVCGTRLSLAAAPDNPL     
40 DPOL_NPVOP/1-4  89.1%  18.3%      GYYGIF-----------CKLLA----NHITRVGR----------------EKLTAAIGTVEGLSNDPDLLRE------FG     
41 DPOL_NPVBM/1-4  89.1%  18.6%      GYYGIF-----------YKVLA----NYITRVGR----------------NQLRRAISLIEGLSNDPE------ILKKFN     
42 DPOL_FOWPV/1-5  93.4%  13.7%      GLMGFSNS--TLY----SYSSA----KTCTTIGR----------------NMITYLDSIMNGAVWENDKLILADFPRNIF     
43 DPOL_SULAC/1-4  87.6%  19.1%      GVFGAENF--PLY----APAVA----ESVTAIGR----------------YIITTTYKQAEKLN----------------     
44 AB55093|CAB550  88.2%  19.3%      GCLGFQYS--RFY----AKPLA----ALVTAKGR----------------EILMHSKDLVEKMG----------------     
45 AB57747|CAB577  87.8%  17.7%      GVFGAETF--PLY----APAVA----ESVTALGR----------------YVITSTVKKAREEG----------------     
46 DPOA_TRYBB/1-4  93.2%  20.3%      GCLGFEYS--RFY----AQPLA----ELVTRQGR----------------LALQNTVELIPQISP---------------     
47 DPO1_SULOH/1-4  86.4%  18.3%      GVFGAENF--PLY----APAVA----ESVTAIGR----------------YVITTTVNYCRSIG----------------     
48 46|DPO2_AERPE/  82.7%  19.6%      GYMGWPHA--RWY----CRECA----EAVTAWGR----------------SIIRTAIRKAGELG----------------     
49 DPOL_BPT4/1-49  88.9%  14.7%      GALGNIHF--RYY----DLRNA----TAITIFGQ----------------VGIQWIARKINEYLNKVCGTND--------     
50 DPOL_CBEPV/1-5  95.7%  13.3%      GLLGSERF--DFN----SPYCA----EYCTALGQ----------------KCIKYIKNLVDKSRYIDN--NLYLNEQNNP     
51 DPOL_THELI/1-4  83.1%  16.4%      GEIKFVK---------------------IGEFIN----------------SYMEKQKENVKTVE----------------     
52 DPOL_NPVLD/1-5  89.9%  17.8%      GYYGIF-----------FKPLA----NYITKMGR----------------GKLKEVVGKVEAMS------DDPRILREFG     
53 DPO3_SULSH/1-3  78.6%  13.1%      DYIHWINS--RWY----SREIA----SAVDELSY----------------EIGKLVIDLIKNSG----------------     
54 45|DPO1_AERPE/  86.4%  21.3%      GVFGSEKF--SLY----SLPVA----ESVTALGR----------------AVLRGTLEKSRELN----------------     
55 DPOL_BPR69/1-5  92.4%  17.8%      GALGNVWF--RYY----DLRNA----TAITTFGQ----------------MALQWIERKVNEYLNEVCGTEG--------     
56 DPO2_SULSO/1-3  76.3%  11.6%      GYLGYRNS--LFG----KIEAY----EMVTYLAR----------------KTLRRTMEIAEEMG----------------     
57 AF07803|AAF078  92.6%  21.2%      GYTAAGFSG-RMP----CAELA----DSIVQCGR----------------STLEKAISFVNAN-----------------     
58 410720|G410720  92.6%  13.2%      GCLGNTNN--RFY----AKHLA----SYITSKGR----------------NLLQHTKFKVEKEF----------------     
59 DPOL_HSVI1/1-4  91.3%  10.3%      DSDKTNRVG-DYM----GYDWS----KIDQGFEK----------------FTLVLRVDRTDPEN----------------     
60 AF05246|AAF052  89.7%  16.9%      GWFGLF-----------CKALA----NHITFIGR----------------ENLTDAIAKIEALSNDE-----RIMKKWNL     
61 DPOZ_YEAST/1-4  89.5%  21.2%      GYTSASFSG-RMP----CSDLA----DSIVQTGR----------------ETLEKAIDIIEKD-----------------     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      GYTSANFSG-RMP----CIEVG----DSIVHKAR----------------ETLERAIKLVNDT-----------------     
63 DPOL_BPB03/1-3  76.1%   8.9%      LELIQEH----YE----MYNVE----YIDGFKFR----------------EKTGLFKEFIDKW-----------------     
64 DPO2_ECOLI/1-4  79.4%  16.5%      GVLGTTAC--RFF----DPRLA----SSITMRGH----------------QIMRQTKALIEAQG----------------     
65 AB58420|CAB584  88.0%  13.1%      GYTAASYTG-RMP----CVDLA----EAIVSLGR----------------QTLERTIELIHNT-----------------     
66 AC19148|AAC191  89.7%  11.6%      GYVMRKGA--RWY----SMEMA----GIVCFTGA----------------NIITQARELIEQIG----------------     
67 AD46482|AAD464  90.5%  11.7%      GYVMRKGA--RWY----SMEMA----GIVCFTGA----------------NIITQARELIEQIG----------------     
68 DPOE_YEAST/1-6  88.7%  11.1%      GYVMRKGS--RWY----SMEMA----GITCLTGA----------------TIIQMARALVERVG----------------     
69 DPOL_BPPZA/1-4  81.0%   7.7%      LELMKEH----YD----LYNVE----YISGLKFK----------------ATTGLFKDFIDKWTHIKTTSEGAIKQLAKL     
70 DPO1_KLULA/1-5  79.4%  10.8%      -----------YS----SKPIQ----NGV---------------------FTLSWARYHMKSIWDAGAKE----------     
71 Q9YQZ6          92.8%  15.8%      GVAPG--------------ACQ----VLITGLGR----------------HKIKIVERFIKEAG----------------     
72 O74719          95.7%   9.3%      AQKWIDTNY-SIK----AESDV----DFDEEEAY----------------KIWDTEYMLIKQHKESEYSSKPIQNGVFTL     
73 DPOM_NEUCR      92.8%  13.0%      EVDDDKHYV-RYD----KKPCP----VLCAQSEK----------------NYELLSYLDGEKDDGFIINSTSIAAATAS-     
74 DPOL_BPPRD      83.7%  11.0%      GRPAEMFN---YF----NVAVA----ASITGAAR----------------SVLLRALAQAERP-----------------     
75 Q09038          94.6%   8.5%      NLDGEDYDK-MII----ERDDDP---IYSTQCGV----------------SILSASRYRLYNLCKKFEG-----------     
76 DPO2_KLULA      94.2%   8.1%      NLDSENYDK-MII----EKEDEP---IYSTQCGI----------------SILSASRYRLYKLCKQFEN-----------     
77 O78938          96.5%  11.0%      NFLVTTKN----P----KVELD-----TILDNGS----------------EKHDINIAIASAITAYSRIQMSKFKNNP--     
78 O21376          93.4%  10.4%      SMNNFVQNTNTLD----SSVIMT---TFVNAYAR----------------IELLKLIINLTDIG----------------     
79 O99973          88.5%  11.9%      VEISKTAKGVKLP----ELASYVP--TYVTSYAR----------------IVLHEAMMGVLDRG----------------     
80 P78988          95.7%   9.9%      EILNIINKEKLFE----SHDKGFN--AKNPWKGV----------------SSSVQLSAAITAYARMYLNKFKN-------     
81 O11414         100.0%   9.7%      NPKSFIEGAGHVT----FKPITHLT-AACDDLIL----------------SIIEERSEWIENNRYPTQIASFVLAWTRAF     
82 S07183          94.2%   9.4%      KCLVTCKNVRSLD----LLKLSS---DRPTYAAV----------------QISAAVTGYARIRMHPFIS-----------     
83 Q83895          99.6%   9.2%      NFPLFIGNQDHVT----FKPITFLS-ADCNDLIL----------------TTIEDKEEWIKNNRYPTQIASFVLAWTRAF     
84 DPOM_NEUIN      94.4%  10.6%      FITSEEEGDAIIA----TKEYV-----TITPLSS----------------GNVLISAKLPEEAFGDMNISVPISSAIAAY     
85 Q96206          88.7%   8.6%      GVLKFRKG----E----LKERD----PVYTPMGC----------------FITAYARENILSNAQKLYP-----------     
86 DPOM_PODAN      93.8%   9.5%      KLDLEKNNSFKDV----AVSIS----AAVTAYAR----------------IFMAQTKLDILKNG----------------     
87 DPOL_ADEB2     100.0%  10.1%      TLFIPKDSHVTYK----YKPITFLE-TEDDDICL----------------HTLENNSPLIENNRYASHIASFVLAWTRVF     
88 DPOL_ADE07     100.0%   9.0%      TPPAGTPGHVAYT----YKPITFLD-VEEGDMCL----------------HTVEKVDPLVDNDRYPSHVASFVLAWTRAF     
89 DPOM_CLAPU      93.4%   8.8%      NSTNTDEKGTMPD----NNVSITTA-AAVLSYAR----------------IHMAQIMLFILENN----------------     
90 DPOL_ADEB3     100.0%   9.0%      TLGDPQNHHVTYT----YKPITFLE-ADDSALCL----------------HTLQKKSSLIFNNRYPSHIASFVLAWTRAF     
91 Q9YUR6         100.0%   9.6%      ELTSPFNSLEFMD----ESPASQTS-TSTAHVGTYKPFNILDVTSENLTIYMLKSTNLHPTNKRYPTQLASFVLAWTRAF     
92 Q39432          91.8%  12.3%      TNMDNTIDRWDPP----KNSAIQLA-AAITACAR-----------------IYMYKYTSREDCY----------------     
93 O62074          98.4%   8.5%      AKIFLNSAWGKFA----QNPMKTETRLIYKKDGKPRR----------DFLGGVPFTNLAIAAITTSAGRLLLLEAMEKVG     
94 DPOM_ASCIM      92.0%   9.9%      GMDPITIKYSVLTPEESEEKLKNSSCIEATTLPSG--------------NVLFKENKPLGEFSNLNTSVPISAAIAAYSR     
95 DPOM_AGABT      95.5%   9.3%      SYMSEVSDNYTLIK--SGGRLNSKLRRLYAEQARIN------------TINDDLLSSKFIKSRGIPSAVQISAMISSYAR     
   consensus/100%                    ................................................................................     
   consensus/90%                     s....................t.......s..sh.................hh......h.t..................     
   consensus/80%                     shhsh......h.....t..hs....t.hs.hup................thl..shthhpt..................     
   consensus/70%                     Ghhuht.s..hh.....sh.hu....t.lTthG+................phlttshthlpphh................     

                     cov    pid 1201          .         .         .         .         :         .         .         . 1280
 1 DPOL_RHCM6/1-4 100.0% 100.0%      GDP------------------------------------------------------------VAVKVIYGDTDSVFVCY     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      GDA------------------------------------------------------------LNVKVIYGDTDSVFVIC     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      IDP----------------------------------------------------------EALRVKIIYGDTDSVFAAF     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      VGTREGDSEESSALP----------------------------------EGLETSSGGSNERRVEARVIYGDTDSVFVRF     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      VDR----------------------------------------------------------DALRVKIVYGDTDSVFVGF     
 6 DPOL_EBV/1-479  96.9%  43.4%      LNP-----------------------------------------------------------EGQLRVIYGDTDSLFIEC     
 7 AD49652|AAD496  96.9%  47.0%      F-T----------------------------------------------------------GDLKVEVIYGDTDSIFMSV     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      RNH----------------------------------------------------------KPYSVRVIYGDTDSVFIKF     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      FSG-----------------------------------------------------------TFGIEVIYGDTDSLFVTF     
10 DPOL_HSVSA/1-4  95.9%  41.4%      HEP-----------------------------------------------------------DAKFRVIYGDTDSLFVEC     
11 DPOD_SOYBN/1-4  93.6%  31.0%      LNG----------------------------------------------------------YEHNAEVIYGDTDSVMVQF     
12 DPOD_CANAL/1-4  93.8%  30.3%      HPY-------------------------------------------------------------DAKVIYGDTDSVMVKF     
13 DPOL_HSV1K/1-5  97.1%  36.1%      RAP----------------------------------------------------------GPYSMRIIYGDTDSIFVLC     
14 DPOD_YEAST/1-4  93.8%  31.0%      YKH-------------------------------------------------------------DAVVVYGDTDSVMVKF     
15 DPOD_PLAFK/1-4  93.8%  30.8%      YEH-------------------------------------------------------------NSTVIYGDTDSVMVKF     
16 DPOD_HUMAN/1-4  93.6%  30.5%      YST-------------------------------------------------------------SAKVVYGDTDSVMCRF     
17 AD55134|AAD551  97.1%  37.8%      RGE----------------------------------------------------------GEYSMRIIYGDTDSVFVLC     
18 AB58156|CAB581  93.8%  31.2%      YSH-------------------------------------------------------------DAVVIYGDTDSVMVKF     
19 DPOD_DROME/1-4  94.0%  32.5%      ----------------------------------------------------------------NAVVIYGDTDSVMVNF     
20 DPOL_HSVE2/1-4  95.9%  41.4%      APD------------------------------------------------------------ASFKVIYGDTDSLFIHC     
21 DPOL_VZVD/1-52  97.1%  36.6%      VLS---------------------------------------------------------QKAYEVKVIYGDTDSVFIRF     
22 DPOA_HUMAN/1-4  92.2%  19.2%      -----------------------------------------------------------------LEVIYGDTDSIMINT     
23 DPOL_CHVP1/1-4  92.8%  26.0%      ----------------------------------------------------------------GSEVIYGDTDSVMVKM     
24 DPOL_THEGO/1-4  85.4%  22.3%      ----------------------------------------------------------------GFKVLYADTDGFFATI     
25 DPOA_ORYSA/1-5  91.8%  20.6%      ----------------------------------------------------------------NLEVIYGDTDSIMIHT     
26 DPOL_RSIV/1-50  91.3%  22.3%      ----------------------------------------------------------------GATIVYGDTDSCYIQL     
27 DPOA_YEAST/1-4  92.2%  20.2%      -----------------------------------------------------------------LLVVYGDTDSVMIDT     
28 DPOL_METTH/1-4  84.7%  20.4%      -----------------------------------------------------------------FHTVYADTDGFYATY     
29 DPOA_SCHPO/1-4  89.9%  17.9%      -----------------------------------------------------------------LQVIYGDTDSVMLNT     
30 DPOL_ARCFU/1-3  80.4%  21.6%      -----------------------------------------------------------------FKVLYGDTDSIFVTK     
31 AA82926|BAA829  95.5%  35.2%      MLG----------------------------------------------------------DDYSVSVIYGDTDSVFIKF     
32 DPOA_DROME/1-4  87.2%  17.5%      -----------------------------------------------------------------YDVVYGDTDSLMINT     
33 AD56202|AAD562  97.3%  37.8%      IQL----------------------------------------------------------NQYSVRVINGETDSAYCEV     
34 DPOL_VARV/1-51  95.5%  14.6%      YMDDRDINPI-------------------------------------------VKTSLPIDYRFRFRSVYGDTDSVFTEI     
35 DPOL_ASFL6/1-4  93.8%  19.4%      -----------------------------------------------------------------YGIKYGDTDSLYITC     
36 DPOA_LEIDO/1-4  94.0%  20.1%      ----------------------------------------------------------------SLRVIYGDTDSVMIQT     
37 DPOA_OXYNO/1-5  92.0%  19.3%      ----------------------------------------------------------------GFNVVYGDTDSIMINT     
38 DPOL_METVO/1-4  83.9%  19.8%      -----------------------------------------------------------------FKVIYADTDGFYAKW     
39 DPOL_ORFN2/1-5  95.7%  14.2%      LRDEAFAGRAAEL-------------------------------------EIDAAVAGERTERVGFRSVYGDTDSVFLEV     
40 DPOL_NPVOP/1-4  89.1%  18.3%      LST------------------------------------------------------------LTFKVLYGDTDSTFVLP     
41 DPOL_NPVBM/1-4  89.1%  18.6%      LNS------------------------------------------------------------IGFKVVYGDTDSTFVLP     
42 DPOL_FOWPV/1-5  93.4%  13.7%      SGETMFNKE---------------------------------------------LEVPNMNESFKFRSVYGDTDSIFSEI     
43 DPOL_SULAC/1-4  87.6%  19.1%      -----------------------------------------------------------------LKVIYGDTDSLFLYN     
44 AB55093|CAB550  88.2%  19.3%      -----------------------------------------------------------------YSVVYGDTDSIMINT     
45 AB57747|CAB577  87.8%  17.7%      -----------------------------------------------------------------LTVLYGDTDSLFLLN     
46 DPOA_TRYBB/1-4  93.2%  20.3%      ----------------------------------------------------------------SIRVIYGDTDSVMIQT     
47 DPO1_SULOH/1-4  86.4%  18.3%      -----------------------------------------------------------------LQVLYGDTDSMFLWN     
48 46|DPO2_AERPE/  82.7%  19.6%      -----------------------------------------------------------------LEVIYGDTDSLFVKN     
49 DPOL_BPT4/1-49  88.9%  14.7%      ----------------------------------------------------------------EDFIAAGDTDSVYVCV     
50 DPOL_CBEPV/1-5  95.7%  13.3%      FSNEPVITR----------------------------------------------YSGNLDVNFTFYIIYGDTDSLFINI     
51 DPOL_THELI/1-4  83.1%  16.4%      ----------------------------------------------------------------NTEVLEVN-NLFAFSF     
52 DPOL_NPVLD/1-5  89.9%  17.8%      LSK------------------------------------------------------------INFSVIYGDTDSCFIRV     
53 DPO3_SULSH/1-3  78.6%  13.1%      -----------------------------------------------------------------FEVILAN-DFLVFVK     
54 45|DPO1_AERPE/  86.4%  21.3%      -----------------------------------------------------------------LHIVYGDTDSLFIWD     
55 DPOL_BPR69/1-5  92.4%  17.8%      ----------------------------------------------------------------EAFVLYGDTDSIYVSA     
56 DPO2_SULSO/1-3  76.3%  11.6%      -----------------------------------------------------------------LRVLHGIIDSLVVKG     
57 AF07803|AAF078  92.6%  21.2%      -------------------------------------------------------------DNWNARVVYGDTDSMFVLL     
58 410720|G410720  92.6%  13.2%      ----------------------------------------------------------------NLKVIYGDTDSIMIDT     
59 DPOL_HSVI1/1-4  91.3%  10.3%      -----------------------------------------------------------------PKLVRHTSDTSLSLK     
60 AF05246|AAF052  89.7%  16.9%      TKM-------------------------------------------------------------TLKVVYGDTDSTFVNI     
61 DPOZ_YEAST/1-4  89.5%  21.2%      -------------------------------------------------------------ETWNAKVVYGDTDSLFVYL     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      -------------------------------------------------------------KKWGARVVYGDTDSMFVLL     
63 DPOL_BPB03/1-3  76.1%   8.9%      --------------------------------------------------------------------TYVKTHEKGAKK     
64 DPO2_ECOLI/1-4  79.4%  16.5%      -----------------------------------------------------------------YDVIYGDTDSTFVWL     
65 AB58420|CAB584  88.0%  13.1%      -------------------------------------------------------------PAWRAEVVYGDTDSLFVRL     
66 AC19148|AAC191  89.7%  11.6%      ------------------------------------------------------------------RPLELDTDGIWCVL     
67 AD46482|AAD464  90.5%  11.7%      ------------------------------------------------------------------RPLELDTDGIWCVL     
68 DPOE_YEAST/1-6  88.7%  11.1%      ------------------------------------------------------------------RPLELDTDGIWCIL     
69 DPOL_BPPZA/1-4  81.0%   7.7%      MLNSLYGKFASNPDVTGKVPYLKENGALGFRLGEEETKDPVYTPMGVFITAWARYTTITAAQACFDRIIYCDTDSIHLTG     
70 DPO1_KLULA/1-5  79.4%  10.8%      ----------------------------------------------------------------GAECIYSDTDSIFVHK     
71 Q9YQZ6          92.8%  15.8%      -----------------------------------------------------------------FVHNYGDTDSVMFDL     
72 O74719          95.7%   9.3%      SWAR-----------------------------------------------HHMKLLWDASTRPDTECIYSDTDSIFVRK     
73 DPOM_NEUCR      92.8%  13.0%      WSR-------------------------------------------------------ILMYKHIINSAYTDTDSIFVEK     
74 DPOL_BPPRD      83.7%  11.0%      --------------------------------------------------------------------LYCDTDSIICRD     
75 Q09038          94.6%   8.5%      -----------------------------------------------------------------LEIIYSDTDSIFVRK     
76 DPO2_KLULA      94.2%   8.1%      -----------------------------------------------------------------IDIIYSDTDSIFVKQ     
77 O78938          96.5%  11.0%      ----------------------------------------------------------------NFKLFYSDTDSVYISK     
78 O21376          93.4%  10.4%      -----------------------------------------------------------------YKVYYSDTDSIVVNK     
79 O99973          88.5%  11.9%      -----------------------------------------------------------------GNVYYRDTDSIVTNL     
80 P78988          95.7%   9.9%      --------------------------------------------------------------IPGNEYLGGDTDSIILTH     
81 O11414         100.0%   9.7%      TSEWASFLFEDDWG--------------------------------------------SNIENRSLKVVYGDTDSLFLTQ     
82 S07183          94.2%   9.4%      ----------------------------------------------------------------RDDCYYTDTDSVVVER     
83 Q83895          99.6%   9.2%      MSEWAEILYGEDMG--------------------------------------------KPYIEREIKSIYGDTDSLFLTE     
84 DPOM_NEUIN      94.4%  10.6%      SRIHMS----------------------------------------------------HFLTKYSNNIYYIDTDGIKVDI     
85 Q96206          88.7%   8.6%      ------------------------------------------------------------------RFIYADTDSIHVEG     
86 DPOM_PODAN      93.8%   9.5%      -----------------------------------------------------------------GNLYYTDTDSIVTDI     
87 DPOL_ADEB2     100.0%  10.1%      VSEWAEFLYAEDRG--------------------------------------------KPLHQRTIKSVYGDTDSLFVTE     
88 DPOL_ADE07     100.0%   9.0%      VSEWAG--------------------------------------------FLYEEDRGTPLEDRPIKSVYGDTDSLFVTQ     
89 DPOM_CLAPU      93.4%   8.8%      -----------------------------------------------------------------GTLYYTDTDSIVTDL     
90 DPOL_ADEB3     100.0%   9.0%      VSEWADILYLEDRG--------------------------------------------TPLEDRILKFVYGDTDSMFLTQ     
91 Q9YUR6         100.0%   9.6%      MSEWREILYS--------------------------------------------DEDSIPVQFKTIKSIYGDTDSLFLTE     
92 Q39432          91.8%  12.3%      -----------------------------------------------------------------------YTDSVVLGN     
93 O62074          98.4%   8.5%      ----------------------------------------------------------------IENLIYCDTDSLIFKQ     
94 DPOM_ASCIM      92.0%   9.9%      MIMS------------------------------------------------------EYLIKYADNLYAVDTDGIKVDT     
95 DPOM_AGABT      95.5%   9.3%      TSIN------------------------------------------------------PFKNIPGNLAIASNTDSLILRK     
   consensus/100%                    .........................................................................p..h...     
   consensus/90%                     ....................................................................hhsDTDuhhh..     
   consensus/80%                     .................................................................hphlYuDTDSlhhth     
   consensus/70%                     .................................................................hpllYuDTDSlhlph     

                     cov    pid 1281  ] 1282
 1 DPOL_RHCM6/1-4 100.0% 100.0%      RG     
 2 DPOL_GPCMV/1-5 100.0%  51.3%      GG     
 3 DPOL_MCMVS/1-5  99.8%  55.9%      YG     
 4 DPOL_HCMVA/1-6 100.0%  57.6%      RG     
 5 DPOL_RCMVM/1-5  99.2%  52.0%      RG     
 6 DPOL_EBV/1-479  96.9%  43.4%      RG     
 7 AD49652|AAD496  96.9%  47.0%      RN     
 8 DPOL_HSVEB/1-5  96.9%  36.4%      VG     
 9 DPOL_HSV7J/1-4  97.3%  44.9%      KN     
10 DPOL_HSVSA/1-4  95.9%  41.4%      VG     
11 DPOD_SOYBN/1-4  93.6%  31.0%      GV     
12 DPOD_CANAL/1-4  93.8%  30.3%      GY     
13 DPOL_HSV1K/1-5  97.1%  36.1%      RG     
14 DPOD_YEAST/1-4  93.8%  31.0%      GT     
15 DPOD_PLAFK/1-4  93.8%  30.8%      GT     
16 DPOD_HUMAN/1-4  93.6%  30.5%      GV     
17 AD55134|AAD551  97.1%  37.8%      RG     
18 AB58156|CAB581  93.8%  31.2%      GV     
19 DPOD_DROME/1-4  94.0%  32.5%      GV     
20 DPOL_HSVE2/1-4  95.9%  41.4%      RG     
21 DPOL_VZVD/1-52  97.1%  36.6%      KG     
22 DPOA_HUMAN/1-4  92.2%  19.2%      NS     
23 DPOL_CHVP1/1-4  92.8%  26.0%      KL     
24 DPOL_THEGO/1-4  85.4%  22.3%      PG     
25 DPOA_ORYSA/1-5  91.8%  20.6%      GL     
26 DPOL_RSIV/1-50  91.3%  22.3%      GH     
27 DPOA_YEAST/1-4  92.2%  20.2%      GC     
28 DPOL_METTH/1-4  84.7%  20.4%      RG     
29 DPOA_SCHPO/1-4  89.9%  17.9%      NV     
30 DPOL_ARCFU/1-3  80.4%  21.6%      AG     
31 AA82926|BAA829  95.5%  35.2%      KG     
32 DPOA_DROME/1-4  87.2%  17.5%      NI     
33 AD56202|AAD562  97.3%  37.8%      YR     
34 DPOL_VARV/1-51  95.5%  14.6%      DS     
35 DPOL_ASFL6/1-4  93.8%  19.4%      PD     
36 DPOA_LEIDO/1-4  94.0%  20.1%      GI     
37 DPOA_OXYNO/1-5  92.0%  19.3%      GS     
38 DPOL_METVO/1-4  83.9%  19.8%      DY     
39 DPOL_ORFN2/1-5  95.7%  14.2%      GA     
40 DPOL_NPVOP/1-4  89.1%  18.3%      VF     
41 DPOL_NPVBM/1-4  89.1%  18.6%      TF     
42 DPOL_FOWPV/1-5  93.4%  13.7%      ST     
43 DPOL_SULAC/1-4  87.6%  19.1%      PT     
44 AB55093|CAB550  88.2%  19.3%      NS     
45 AB57747|CAB577  87.8%  17.7%      PP     
46 DPOA_TRYBB/1-4  93.2%  20.3%      GI     
47 DPO1_SULOH/1-4  86.4%  18.3%      PS     
48 46|DPO2_AERPE/  82.7%  19.6%      DP     
49 DPOL_BPT4/1-49  88.9%  14.7%      DK     
50 DPOL_CBEPV/1-5  95.7%  13.3%      KF     
51 DPOL_THELI/1-4  83.1%  16.4%      NK     
52 DPOL_NPVLD/1-5  89.9%  17.8%      LF     
53 DPO3_SULSH/1-3  78.6%  13.1%      GG     
54 45|DPO1_AERPE/  86.4%  21.3%      PP     
55 DPOL_BPR69/1-5  92.4%  17.8%      DK     
56 DPO2_SULSO/1-3  76.3%  11.6%      DN     
57 AF07803|AAF078  92.6%  21.2%      KG     
58 410720|G410720  92.6%  13.2%      GI     
59 DPOL_HSVI1/1-4  91.3%  10.3%      RY     
60 AF05246|AAF052  89.7%  16.9%      KM     
61 DPOZ_YEAST/1-4  89.5%  21.2%      PG     
62 DPOZ_HUMAN/1-4  89.3%  19.9%      KG     
63 DPOL_BPB03/1-3  76.1%   8.9%      QL     
64 DPO2_ECOLI/1-4  79.4%  16.5%      KG     
65 AB58420|CAB584  88.0%  13.1%      AG     
66 AC19148|AAC191  89.7%  11.6%      PN     
67 AD46482|AAD464  90.5%  11.7%      PN     
68 DPOE_YEAST/1-6  88.7%  11.1%      PK     
69 DPOL_BPPZA/1-4  81.0%   7.7%      TE     
70 DPO1_KLULA/1-5  79.4%  10.8%      EH     
71 Q9YQZ6          92.8%  15.8%      PC     
72 O74719          95.7%   9.3%      EE     
73 DPOM_NEUCR      92.8%  13.0%      PL     
74 DPOL_BPPRD      83.7%  11.0%      LK     
75 Q09038          94.6%   8.5%      NT     
76 DPO2_KLULA      94.2%   8.1%      KS     
77 O78938          96.5%  11.0%      EL     
78 O21376          93.4%  10.4%      PL     
79 O99973          88.5%  11.9%      RM     
80 P78988          95.7%   9.9%      PL     
81 O11414         100.0%   9.7%      HG     
82 S07183          94.2%   9.4%      EL     
83 Q83895          99.6%   9.2%      KG     
84 DPOM_NEUIN      94.4%  10.6%      DL     
85 Q96206          88.7%   8.6%      LG     
86 DPOM_PODAN      93.8%   9.5%      DL     
87 DPOL_ADEB2     100.0%  10.1%      EG     
88 DPOL_ADE07     100.0%   9.0%      RG     
89 DPOM_CLAPU      93.4%   8.8%      KL     
90 DPOL_ADEB3     100.0%   9.0%      RG     
91 Q9YUR6         100.0%   9.6%      KG     
92 Q39432          91.8%  12.3%      PL     
93 O62074          98.4%   8.5%      IQ     
94 DPOM_ASCIM      92.0%   9.9%      EI     
95 DPOM_AGABT      95.5%   9.3%      PL     
   consensus/100%                    ..     
   consensus/90%                     ..     
   consensus/80%                     .h     
   consensus/70%                     th