cov pid 1 [ . . . . : . . . 80 1 TDT_BOVIN/1-35 100.0% 100.0% NYN-HIFTDAFEILAENSE--FKENEVSY------VTFMRAASVLKSLPFTIISMKDTE-GI----------PCLGDKVK 2 TDT_MONDO/1-36 100.0% 73.4% NHN-QRFTDAFEILAKNYE--FKENDDTC------LTFMRAISVLKCLPFEVVSLKDTE-GL----------PWIGDEVK 3 TDT_CHICK/1-35 97.4% 68.8% NCN-KKFTDAFEIMAENYE--FKENEIFC------LEFLRAASVLKSLPFPVTRMKDIQ-GL----------PCMGDRVR 4 TDT_XENLA/1-35 99.7% 61.9% DTN-RIFTDAFDILAEHFE--FCENKGRT------VAFLRASSLIKSLPFPITAMKELE-GL----------PWLGDQMK 5 TDT_AMBME/1-35 98.8% 61.4% NKN-TLFTDAFEILAENYE--FRENERSC------LSFRQAASVLKSLTFTIAGMADVD-GL----------PGFGDHIR 6 TDT_ONCMY/1-35 99.4% 52.0% NHNNKIFTDVMEELAESSE--FNESKGPC------LAFRQAASVLKSLPSAVHCLKAIQ-GL----------PCLGEHTK 7 DPOB_RAT/1-333 91.3% 21.4% TLN-GGITDMLVELANFEKN-VSQAIHKY------NAYRKAASVIAKYPHKIKSGAEAK-KL----------PGVGTKIA 8 YA26_SCHPO/1-3 90.5% 23.3% CVN-QAFVNALSVLKTCREV-NGESVRTR------AYG-MAIATIKAFPLPIDSAEQLE-KM----------PGCGPKIV 9 87|Q23687/1-37 94.2% 15.0% RGHRENIIRIFQEMADLNNA-LGEKYKVS------SYLRSIESLKTNLDKPLNTPQDLK-AF----------SGFGAKLL 10 AD39573|AAD395 84.7% 18.0% NIY-RGTISGVCILDYSLIVTLGEDRRSF------SYY-KAIPVIEKFPTRIESVDQLK-HL----------PGIGKAMR 11 X5|Q9YVX5/1-31 84.4% 17.2% ILNKRKIIYMLHNIANIYEK-LDENKYKAYNKAINSIYEQGIIILKYNNTTINSPKLVD-NMETVISKYKDIPNIGDSIS 12 DPO4_YEAST/1-3 97.1% 17.8% YKNNELIIGALKRLTKKYEI-EGEKFRAR------SYRLAKQS-MENCDFNVRSGEEAHTKL----------RNIGPSIA 13 44|P94544/1-31 85.5% 16.5% MHK-KDIIRLLETIAVYMEL-KGDNPFKV------SAFRKAAAALEQDDRSLSEMDDMM-SL----------SGIGKGTY consensus/100% .h..t.hh.hh..ht.......tpt............h..h...ht..s..l.t.t.h..th............hG.th. consensus/90% .hp.p.hhthhp.hs...p...t-p.h.h........h.tt.shhpt.sh.l.t.tthp.th..........s.hG.thh consensus/80% .hp.phhhphhp.lsp..c..htEs.h.h.......hh.pu.uhlcphsh.ltshpphp.th..........sshGtphh consensus/70% phN.phhhshhp.lAp..E..htEs.hth.......hahpAhullcphshslpshcphc.tl..........PshGspht cov pid 81 . 1 . . . . : . 160 1 TDT_BOVIN/1-35 100.0% 100.0% CIIEEIIEDGESSEVKAVLNDER--YQSFKLFTSVFGVG-LKTSEKWFR-MGFRSLSK-IMSDKT--LKFTKMQ-KAG-- 2 TDT_MONDO/1-36 100.0% 73.4% GIMEEIIEDGESLEVQAVLNDER--YQSFKLFTSVFGVG-LKTADKWYR-MGFRTLNK-IRSDKT--LKLTKMQ-KAG-- 3 TDT_CHICK/1-35 97.4% 68.8% DVIEEIIEEGESSRAKDVLNDER--YKSFKEFTSVFGVG-VKTSEKWFR-MGLRTVEE-VKADKT--LKLSKMQ-RAG-- 4 TDT_XENLA/1-35 99.7% 61.9% GIIEEILEEGKSYKVLEVMNEER--YKSFKQFTSVFGVG-LKTSDKWFR-MGFRTLEE-IKNEKE--LKLTKMQ-KCG-- 5 TDT_AMBME/1-35 98.8% 61.4% AVIEDLIEDGES---KRVLNDEV--YRSLKLFTTIFGVG-LRTAEKWHR-LGIRTLEE-IKSNEN--LKFSKIQ-IAG-- 6 TDT_ONCMY/1-35 99.4% 52.0% AVMEEILTFGRSFKVEEIRCDER--YQALKLFTSVFGVG-PKTAEKWYR-RGLRSLQE-ILTEPN--IQLNRMQ-RAG-- 7 DPOB_RAT/1-333 91.3% 21.4% EKIDEFLATGKLRKLEKIRQDDT--SSSINFLTRVTGIG-PSAARKLVD-EGIKTLED-LRKNE---DKLNHHQ-RIG-- 8 YA26_SCHPO/1-3 90.5% 23.3% HLWKEFASTGTLKEAEEFQKDPA--SKILLLFYNIFGVG-ASHAAEWYQ-KGWRTIEQ-VRKHK---DSFTKQI-KVG-- 9 87|Q23687/1-37 94.2% 15.0% KKAEEIMATGKL-EELESKTKPK--LKAIQELTQVHGFGPPRRAALFDR-EGIFTVEE-LLQKADSISSLTDQQ-RVG-- 10 AD39573|AAD395 84.7% 18.0% DHIQEIVTTGKLSKLEHFETDEK--VRTISLFGEVWGVG-PATALKLYE-KGHRTLED-LKNED----SLTHAQ-KLG-- 11 X5|Q9YVX5/1-31 84.4% 17.2% KKIYNIISNTYI---DNISNTKE--YKYITELMNVLYIG-PKTAKNLIS-KGIKTIKD-LKKNKD--KYLNSQQ-QIA-- 12 DPO4_YEAST/1-3 97.1% 17.8% KKIQVILDTGVL----PGLNDSVGLEDKLKYFKNCYGIG-SEIAKRWNL-LNFESFCVAAKKDPE--EFVSDWTILFG-- 13 44|P94544/1-31 85.5% 16.5% SVIKEYIDEGKS-STLESLQKEV--PEGLVPLLKLPGLG-GKKIAKLYKELGVHDAES-LKEACE---QQKVQG-LAGFG consensus/100% thh..hht.s.........pp.....p.h..hhph.hhG..th...h....sh.shp..hhtt.......p.....hu.. consensus/90% thhpphhtpG......t..pc.h...p.h..hhplhGlG..ptutph.p..Ghcohpp.lhpp......hsp.t.hhG.. consensus/80% thhp-hlppGp.....th.pcph...pthp.hhplhGlG..pputchhp.hGh+olpp.lhppt....phsc.p.hhG.. consensus/70% thhcEllppGc..p..phhs-ct...pshp.htplaGlG..cput+hhc.hGh+olpc.l+pppp...phsc.Q.phG.. cov pid 161 . . . 2 . . . . 240 1 TDT_BOVIN/1-35 100.0% 100.0% ----FLYYEDLVSCVTRAE-AEAVGVLVKEAVWAFLPDAFV--------TMTGGFRRGKKIGHDVDFLITSPGSAEDEE- 2 TDT_MONDO/1-36 100.0% 73.4% ----LCYYEDLIDCVSKAE-ADAVSLLVQDAVWTFLPDALV--------TITGGFRRGKEFGHDVDFLITSPGAEKEQED 3 TDT_CHICK/1-35 97.4% 68.8% ----FLYYEDLVSCVSKAE-ADAVSSIVKNTVCTFLPDALV--------TITGGFRRGKKIGHDIDFLITSPGQREDDE- 4 TDT_XENLA/1-35 99.7% 61.9% ----LLYYEDITSYVSRAE-AETTEQLIKSIVWKFVPDAIV--------TLTGGFRRGKKKGHDVDILITCARKGKEKN- 5 TDT_AMBME/1-35 98.8% 61.4% ----LQHYEDILGGVRKAE-ADAVAMVVRDAVWTFLPDAVV--------TLTGGFRRGNKTGHDVDMLITSPIQGKEKE- 6 TDT_ONCMY/1-35 99.4% 52.0% ----FLYYSDISKAVSKAE-AKAVGCIIEDTFHWIAPDAIL--------ALTGGFRRGKEYGHDVDFLLTMPEIGKDEG- 7 DPOB_RAT/1-333 91.3% 21.4% ----LKYFEDFEKRIPREE-MLQMQDIVLNEVKKLDPEYIA--------TVCGSFRRGAESSGDMDVLLTHPNFTSESS- 8 YA26_SCHPO/1-3 90.5% 23.3% ----LEFYEDFCKTVTIEEATEIYETIVSRMPDGIKIQS----------CLVGGFRRGKPVGADVDMVLSPSHTHSTKH- 9 87|Q23687/1-37 94.2% 15.0% ----IKYFYDINEKIPMQESVLHENYLREKCLEVLGKDYTI--------AISGTYRRRHPFSGDVDALLSRTHDAPPLS- 10 AD39573|AAD395 84.7% 18.0% ----LKYFDDIKTRIPRQE----------VRFLNFNVNFVC-------------------------------LYYPSCN- 11 X5|Q9YVX5/1-31 84.4% 17.2% ----IEYYDKL-KPINRSF-ISNLESSIKLSPNKEW--YIL-----------GSYARGKLTSKDIDILI----------- 12 DPO4_YEAST/1-3 97.1% 17.8% ----WSYYDDWLCKMSRNECFTHLKK-VQKALRGIDPECQV--------ELQGSYNRGYSKCGDIDLLFFKPFCNDTTEL 13 44|P94544/1-31 85.5% 16.5% KKSEEKILQALGEAGKQPE-RFPIGY-ALRIAREIEEHLSQFTHIIKF-SRAGSLRRARETVKDLDYIIATDHPAEVRE- consensus/100% ......hh.th.t.h................................................................. consensus/90% ....h.aapch.phh.htE.h...t..h......h..ph.............GshtRt...stDhDhlh.........t. consensus/80% ....h.aapDh.ptlsptE.h..ht..h.phh.th..ph.h........th.GuapRut.hstDlDhll..s..t..pp. consensus/70% ....h.Ya-Dl.ptls+tE.h.tht..lppthhth..chhh........shsGuaRRGp.hutDlDhLls.sh.tpppp. cov pid 241 : . . . . 3 . . 320 1 TDT_BOVIN/1-35 100.0% 100.0% QLLPKVINLWEKKGLLLYYDL-----VESTFEKFKLPSRQVDTLDHFQ------------KCFLILKLHHQRVDS----- 2 TDT_MONDO/1-36 100.0% 73.4% QLLQKVTNLWKKQGLLLYCDL-----IESTFEDLKLPSRKIDALDHFQ------------KCFLILKLYHHKEDKRKWEM 3 TDT_CHICK/1-35 97.4% 68.8% -----LLHKG----LLLYCDI-----IESTFVKEQIPSRHVDAMDHFQ------------KCFAILKLYQPRVDNSSYNM 4 TDT_XENLA/1-35 99.7% 61.9% -ILHNTMSVLKNRGLLLFYNI-----IESTFDETKLPSRHVDALDHFQ------------KCFTILKLPKRQMDIGN--- 5 TDT_AMBME/1-35 98.8% 61.4% -LLHKVINLWKKQDLLLCHTI-----HESTMDEDNLPSKSVNLLDHFQ------------KCFAILKSNQHRGEISSCDG 6 TDT_ONCMY/1-35 99.4% 52.0% -LLLHVIDRLKDQGILLYCDY-----QGSTFDVSKLPSCRFEDMDCFQ------------KCFLILRLEQGQVEGER--- 7 DPOB_RAT/1-333 91.3% 21.4% -----KQPKL----------------LHRVVEQLQKVRFITDTLSKGE------------TKFMGVCQLPSENDENEYPH 8 YA26_SCHPO/1-3 90.5% 23.3% -----LVDVL----------------LRILDEEFQFRLISVQEHSCGGK-----------KGYVMLAVILSNSSKIN--- 9 87|Q23687/1-37 94.2% 15.0% ---EPVAATGV---------------LGNYVEHLEKTNYLEATMAQGP------------LKYMGMGRLPPRIVRDKAGR 10 AD39573|AAD395 84.7% 18.0% -FLLIFLHFL-------YCRC-------KRWNNFYRESARKLCLARGKA---------TCGDLDIVVTHPDGQRKELSGL 11 X5|Q9YVX5/1-31 84.4% 17.2% ------VDFD----------------IDEILKEIYKYAKEEAVLRHGK----------------IMYSGIFKKDKTY--- 12 DPO4_YEAST/1-3 97.1% 17.8% AKIMETLCIKLYKDGYIHCFLQLTPNLEKLFLKRIVERFRTAKIVGYGERKRWYSSEIIKKFFMGVKFSPRELEELKEMK 13 44|P94544/1-31 85.5% 16.5% -------QLL------------------------ELPNIK-SVIASGD-------------TKVSVILSFEYE------- consensus/100% ........h..........................h..h....h.th..................hh............. consensus/90% .......thh...................h.....h.th..t.hspht..............h.hhh....t........ consensus/80% .....hhphh.................tphh.p..h.php.thhspht............hthhhlh....p.p...... consensus/70% .....hhshh................htphhpp.ph.shphsshsphp............tpahhlth..tp.ct..... cov pid 321 . . : . . . . 4 400 1 TDT_BOVIN/1-35 100.0% 100.0% -SKSNQQEGKTWKA---------------------IRVDLVMCPYENRAFALLGWTGSRQFERDIRRYATHE-RKMMLDN 2 TDT_MONDO/1-36 100.0% 73.4% PTGSNESEAKSWKA---------------------IRVDLVVCPYDRYAFALLGWSGSRQFERDLRRYATHE-KKMMLDN 3 TDT_CHICK/1-35 97.4% 68.8% SKKCDMAEVKDWKA---------------------IRVDLVITPFEQYAYALLGWTGSRQFGRDLRRYATHE-RKMMLDN 4 TDT_XENLA/1-35 99.7% 61.9% IIDPHECERKNWKA---------------------VRLDLVITPYEQYPYALLGWTGSRQFERDLRRYATHE-KRMMLDN 5 TDT_AMBME/1-35 98.8% 61.4% PHDSRERGKRIWKA---------------------IRVDLVFCPFEQYAFALLGWTGSRQFERDLRRYASHE-KKMMIDN 6 TDT_ONCMY/1-35 99.4% 52.0% GLQRDPGDSRGWRA---------------------VRVDLVAPPVDRYAFALLGWTGSR-FGRDLRTFAQKE-RQMLLDN 7 DPOB_RAT/1-333 91.3% 21.4% -----------------------------------RRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYT 8 YA26_SCHPO/1-3 90.5% 23.3% -----------------------------------RRVDIIVVPPAYIGSAVLGWSGGIFFLRDLKLYANSH-LGLSYDS 9 87|Q23687/1-37 94.2% 15.0% ENTKVYKA---------------------------RRVDIRLIETKSVPTAMLTFTGSKNFNVIMRQAAIAKGYLLNEYG 10 AD39573|AAD395 84.7% 18.0% VKDKKDN----------------------------TMID-SAMSRDIYSFGLIAWTGNDVLNRRLRLLAESKGYRLDDTG 11 X5|Q9YVX5/1-31 84.4% 17.2% -----------------------------------FLIDIYKTTESEKYTSIQYFTGSKEFNIALRSLALSK--DIRLNQ 12 DPO4_YEAST/1-3 97.1% 17.8% NDEGTLLIEEEEEEETKLNPIDQYMSLNAKDGNYCRRLDFFCCKWDELGAGRIHYTGSKEYNRWIRILAAQKGFKLTQHG 13 44|P94544/1-31 85.5% 16.5% -----------------------------------TSVDFRLVTEEQFPTTLHHFTGSKDHNIKMRQIAKERGERISEYG consensus/100% ...................................h.lD..h...t.h..sh.haoGs..h.h.h+.hA.tc...h...t consensus/90% ...................................hhlDhhhh..p.h.huhhhaoGuc.ath.hR.hA.pc..th...s consensus/80% ...................................hplDhhhhs.cphshulltaTGSc.aththR.hA.pc.hph...s consensus/70% ...................................hRlDlhhssh-phshulltaTGS+.Fp+plRthAtpc.hph..ps cov pid 401 . . . . : . ] 463 1 TDT_BOVIN/1-35 100.0% 100.0% HALYDKTKR----------------------------VFLKAESEEEIFAHLGLDYIEPWERN 2 TDT_MONDO/1-36 100.0% 73.4% HALYDKTKK----------------------------IFLKAKSEEEIFAHLGLEYIQPSERN 3 TDT_CHICK/1-35 97.4% 68.8% HALYDKRKR----------------------------VFLKAGSEEEIFAHLGLDYVEPWERN 4 TDT_XENLA/1-35 99.7% 61.9% HGLYDKTKN----------------------------NFLKANNEEDIFKQLGLDYLEPWERN 5 TDT_AMBME/1-35 98.8% 61.4% HALYDKTKK----------------------------VFVKCESGEEIFGHLGLEYIDPVERN 6 TDT_ONCMY/1-35 99.4% 52.0% HALYDKTKK----------------------------LCLLATTEEDIFTHLGLEYVEPWQRN 7 DPOB_RAT/1-333 91.3% 21.4% IRPLGVTGVAG--------------------------EPLPVDSEQDIFDYIQWRYREPKDRS 8 YA26_SCHPO/1-3 90.5% 23.3% FEIINLKTGKDICPDEFN------------------EWKDPVEAEKDIFRYFSLEYIEPKFRN 9 87|Q23687/1-37 94.2% 15.0% LFRLGTPEEARALYERVGIKGKNAGEELGVPKEELEDKRVDVRSEQDVFDALGMPYAKPENRD 10 AD39573|AAD395 84.7% 18.0% LFPATHSSSGNRG--------------------ARGTASLKLSTEKQVFDFLGFPWLEPHERN 11 X5|Q9YVX5/1-31 84.4% 17.2% HEMYDLQTQ----------------------------KKYNIKSEKDIFDILGVKYVPPSKRD 12 DPO4_YEAST/1-3 97.1% 17.8% LFRNN--------------------------------ILLESFNERRIFELLNLKYAEPEHRN 13 44|P94544/1-31 85.5% 16.5% VETVETGEIKT------------------------------FPSEREFYAHFGLPLIPPEIRE consensus/100% h...t......................................stpphat.hth.hh.P..Rp consensus/90% h..hsh.t.................................h.sEpclFthhsh.ah.P..Rs consensus/80% h.hhshtp...............................h.htsEc-lFthluh.YhpP.pRs consensus/70% hthhshppt............................hhl.spoEc-IFshLGlcYlcP.pRs