cov pid 1 [ . . . . : . . . 80 1 GI|2499808|SP|Q 100.0% 100.0% GELVLDRGAVRALKERG-ASLLPAGVKEVRGR------FSRGEAVRLLSE------------EGEEVGVGLANYASEEIA 2 GI|2499807|SP|P 100.0% 46.4% GKIFIDAGAVQALKARG-KSLLAIGVVALEGE------FSATDAVIICDP------------QGQELGRGLVNYNCNELE 3 GI|1172628|SP|P 100.0% 45.2% GIITIDNGAQNAILEQN-KSLLPAGIINVEGR------FSRGEVVKIRTQ------------SGKDIALGMPRYNSDALQ 4 GI|216953|DBJ|B 100.0% 44.0% GEITVDDGAVEAMMARG-SSLLPKGIREVKGD------FSRGEVIRIRNL------------TGRDLAHGVSRYNSDAMR 5 GI|3183548|SP|P 94.0% 39.3% GEIIIDAGAEEAMIHNG-SSLLPAGVVGVNGS------FPKGAVVEVRG-------------PGGVIGKGQTHYSSEEIM 6 GI|1172627|SP|P 95.2% 33.3% GKIRLDDGAVEAVTSGG-KSLLAVGITEIIGD------FQQGEIVEILGP------------AGQIIGRGEVSYDSDTLQ 7 GI|4062534|DBJ| 100.0% 22.1% VRLVLAKGREKSLLRRH-PWVFSGAVARMEGK------ASLGETIDIVDH------------QGKWLARGAYSPASQIRA 8 GI|2984295/1-93 100.0% 12.8% LQVRVKPGVEDRIRGFF-PWVYRSEIASFSRK------PKKGEIVVVRDV------------NGKFLGYGYINPEVNIAI 9 GI|4585975|GB|A 100.0% 21.1% AKVVLKKGKTQLFKDGS-PMVYSGAVDRIIGKP----PPQTGDVVIVADG------------TENPIGWGLYNSVSMFCV 10 GI|1666145|EMB| 92.9% 36.0% GALTLDAGAVRAVVRQR-RSLLAAGITAVSGR------FCGGDVVELRAP------------DAAMVARGVVAYDASELA 11 GI|2983178/1-89 95.2% 17.4% MKVFLKKGKEKKVKHFY-PWVFRDEVEKIEG---------EGIVAELYDS------------EGNFLALGTYSPYSRIAF 12 GI|2209379/1-89 97.6% 27.4% GEMILSDDCSRKITNGQ-SSLYLDGVQKIKGK------FKSGSVVRLMDS------------KGTEIGLGIVNYSSVQLQ 13 GI|3915184|SP|O 89.3% 16.7% PKIWIKDSAVAAVAHGA--NLTVPGIVKLNVG------IKRGDLVAIMTL------------KDELVALGKAMMTSQEMM 14 GI|3859498/1-91 97.6% 58.1% GEVVVDAGAAKALRQGG-ASLLPAGILEVRGQ------FGVGEAVRCLDE------------QGNLIGVGLVNYSAAELA 15 GI|3258357|DBJ| 100.0% 23.3% ARVVVDAQAARAIGKGA-MIVFKKGVVRVEGD------IKPGDIVEVYTR------------GGKFLGKGFANPNSNIMV 16 GI|2983601/1-89 95.2% 44.2% GIIVVDRGAQEALKAGK--SLLPAGVVSVQGN------FKRGDVVSIQNE------------EGLIIGKGKVNFSSEEIE 17 GI|172241/1-104 97.6% 36.4% GAVVIDQGAYRALTRKNKAGLLPAGVIDVQGT------FHELECVDIKVGKKLPDGTLDPDFPLQTVGKARCNYTSSELT 18 GI|3183130|SP|O 96.4% 46.0% GSLEIDRGAFEAITRTNRAGLLPVGVTKVHGH------FSAHQAVTVIY-------------NGEEIGRALVNYSSTEID 19 GI|731646|SP|P3 97.6% 32.3% GAIIIDENSYDKLLSKDMASLTPNAVIEVRDN------FHELECVDLKIGQRLPNGELDISKPIQSVGCVRSNYTSLELA 20 GI|3334438|SP|Q 95.2% 21.8% IKLEIDRRAYNSIKNFS--RLVYTKAIKNRGD-----LPKKEEIVTLTY-------------NGKFVAKALYNPKS-VIL 21 GI|732334|SP|P3 100.0% 16.1% KLLTLKKAHAAKIKKGY-PLIEKEALAGSAGH------MKEGDLVDIVSES-----------GGEFLARGYYGLQNKGVG 22 GI|3256657|DBJ| 90.5% 29.8% KWVIIDRGAVEPVKNGA--NVLPVGVIEAEES------IRRGDEVIVVSE------------DGEVVGVGIAKKDYNELI 23 GI|3334439|SP|Q 96.4% 17.2% TKLYVDFGGYSAIEKGN--LIIPRDNILNKEDF---DSIEIGEVVDIYSK------------RGKFLGRGFKNPKEVRIM 24 GI|3334140|SP|O 89.3% 17.9% KRIVVKDSAVNAVCYGA--KLMIPGLLRFEAG------IELGEEVVLMTT------------KGEAIAIGIAQMSTVELS 25 GI|3915195|SP|Q 89.3% 19.0% KKVVVKDSAVDAICHGA--DVYVRGIAKLSKG------IGKGETVLVETL------------KGEAVAVGKALMNTKEIL 26 GI|2495775|SP|Q 90.5% 23.8% KIIKIKNDVVEFLKNRK-GSVLRPGIVEFTDD------IEEKDDVIIVDE------------NDRVVGVGLAVVSSEDIK 27 GI|3257142|DBJ| 89.3% 16.5% RRVVVDEGAVPHILNGA--DVMAPGIVDADEG------IKEGDFVFVVEEK-----------YGRPLAIGIA-LMSGKVM 28 GI|2649170/1-79 88.1% 14.1% YRVTVDEGALKFVMNGA--DVMKPGIVYADER------IKEGDFVFVTVEG-----------KDSPIAVGVA-LCNGEEM 29 GI|3915180|SP|O 89.3% 22.6% PRVVILDSAVDAICHGA--DLARGGIAGLDDN------IAWGDTVAIMTL------------KGELVGVGEASMSALDIA 30 GI|3915164|SP|O 89.3% 20.2% PKIVIKDSAVDAICHGA--NLSVRGVAYVEKN------VKKDSTVAIFTL------------KNELVAIGRALMDAEDIY 31 GI|3914150|SP|O 89.3% 13.1% KRVVVKDSCINAICYGA--KILIPGILRYDDD------IEVGKEIVIMST------------KGEAICIAIAQMNTSTIA 32 GI|3914156|SP|O 89.3% 9.5% KRIIMKDSSVNAVCYGA--KITLPGVLRYEDG------IEIDQEIVICTT------------KGEAICLAIALMTTATMA 33 GI|2621732/1-80 89.3% 17.6% GYVVVDMGAVRFLANGA--DVMSPGIVDADPE------ISENDTVVVVDER-----------NRRPLAVGISLISGPEMV 34 GI|2129072|PIR| 89.3% 15.3% NLVVVDIGAIKFLINGA--DVMAPGIVDADEN------IKEEDVVFVVDEN-----------HKKPICVGIALMNGKEMK 35 GI|3258435|DBJ| 89.3% 17.9% PVVVANKYAAESVYQGA--MLYAPGVLKADKN------IKEGDEVQIRDP------------KGLLVGIGIARMDYKEMT 36 GI|4539267|EMB| 89.3% 14.6% TQVRVDRGAIKFLLSGA--NIMIPGLVSKGGNLP--DDIEKDQYVIVTAEG-----------KEAPAAIGLTKMSAKEMK 37 GI|2649908/1-76 89.3% 11.9% MRVVVMDEVSDFIAAGK--SVFAKHVVEVDEE------IRANDEVVVVNT------------ADKLLATGRAVLSAFEML 38 GI|4680713|GB|A 90.5% 11.9% YKVWIKPGAEQSFLYGN--HVLKSGLGRITEN------TSQYQGVVVYSM------------ADIPLGFGVAAKSTQDCR 39 GI|2132233|PIR| 90.5% 8.3% YKIWIKPNGEMPFLYGN--HVLKAHVGKMSDD------IPEHAGVIVFAM------------NDVPLGFGVSAKSTSESR 40 GI|2854153/1-80 89.3% 15.7% PHQQVDKGAIKFILNGS--SIMCPGLTSPGAKLT--PLVPKDSVVAVMAEG-----------KQHALAIGLMSMSSEEIQ 41 GI|3256521|DBJ| 81.0% 19.0% YWVEVDFDIRG--------DVFAAGVERADEG------IRPNDIVGIVR-------------DGRVVAVGRAVLSGEEMV 42 GI|1084581|PIR| 85.7% 14.3% PTVQVDRGAIKFVLSGA--NIMCPGLTSAGADLPPAPGYEKGTIVVINAEN-----------KENALAIGELMMGTEEIK 43 GI|2650585/1-86 94.0% 9.5% NRVWVNERGEMLFLYGR--DIFAGSVERASE-------FGENSIVFVCNR------------FDDVLGIGRSRHSSDELS 44 GI|3257532|DBJ| 89.3% 11.9% MRVVVNKEAEPFARKGK--DVFAKFVIFADPG------IRPYDEVLVVNE------------NDELLATGQALLSGREMI 45 GI|2495984|SP|Q 89.3% 13.1% YRVVVNKEAEEFAREGR--NVFAKFVIDCDEE------LRPYEEVLVVNE------------DDELLAYGTTILNGIELR 46 GI|2622794/1-67 82.1% 17.9% KWVEIDFNLESN-------TLFAPGVSDADTG------IIPGDEVVIVQ-------------GGEVAGVGRAVLSGDEMV 47 GI|1703574/1-77 90.5% 10.7% FKVWLKPNAEQQFLYGN--NILKSGIARMTDG------TPTHAGIVVYSM------------TDVPLGFGVSAKGTSDSK 48 GI|3123044|SP|O 89.3% 8.3% WRVAVNEESEPFARKGK--SVFAKFIIDCDNN------IRANDEVLIVNA------------DDELLATGKALLCAEEMM 49 O29668 81.0% 7.1% YTVEIGDFEVKG-------TIFAGGVLRADEK------IRPNDVVVFHNS------------RIFGVGLAAMSGKEMAGS 50 Q58805 79.8% 11.1% NYAIVNEKAEALFLYGR--DIFKESIIEV---------KGFGRIAVFNK-------------NREFLGIGLFDGKIIKNI 51 LIGA_MOUSE 86.9% 13.6% WPLVLEKLVGGA-------DLMLPGVVVPPTGLP---QVQQGDLCAIALV-----------GNRAPVAIGVAAMSTAQML consensus/100% ....h...............l.......................h.h...................hshs.......... consensus/90% ..l.lp.th.t.hh......lh..tl.thttt......h..tp.l.lh..............tt..luhuh...ts..h. consensus/80% hhlhlptts.phhh.tt..plh..ulhphptt......ht.tp.V.lhs.............ttp.luhGhh.hss.phh consensus/70% hplhlcpsu.phlhttt..slhhsGlhphptp......hpts-hVhlhs.............psp.luhGhs.hsstchh cov pid 81 . 1 . ] 112 1 GI|2499808|SP|Q 100.0% 100.0% RIKGR---------RSAEIEAVLGYRYTEEVV 2 GI|2499807|SP|P 100.0% 46.4% KIKGL---------HSEAIAAVLGYVGPDTVI 3 GI|1172628|SP|P 100.0% 45.2% LIKGR---------KSADIENVLGYEYGAVAM 4 GI|216953|DBJ|B 100.0% 44.0% MIAGH---------HSQEISEILGYEYGPVAV 5 GI|3183548|SP|P 94.0% 39.3% EAKGK-------------RSDELDFEKTFEVI 6 GI|1172627|SP|P 95.2% 33.3% SMVGM-------------QTQDLPDGMQRPVV 7 GI|4062534|DBJ| 100.0% 22.1% RVWTFDP-------SESIDIAFFSRRLQQAQK 8 GI|2984295/1-93 100.0% 12.8% RILSFDK-------NEPVTPELIRKRIKQAYE 9 GI|4585975|GB|A 100.0% 21.1% RLMQLQHESTRDPSCALNIEKLLQTRIAEAVQ 10 GI|1666145|EMB| 92.9% 36.0% TMVGRST-------------SELPGELRRPVV 11 GI|2983178/1-89 95.2% 17.4% RVLSYER--------EEVNEEFFKRRLRESEL 12 GI|2209379/1-89 97.6% 27.4% EPE-----------KKKELTNRALIDQEAFVC 13 GI|3915184|SP|O 89.3% 16.7% QRS-----------------KGIAVDVEKVFM 14 GI|3859498/1-91 97.6% 58.1% RIKRRKT---------REIEALLGYKNTDEAI 15 GI|3258357|DBJ| 100.0% 23.3% RIVTKDK-------DVEINKDLFKRRIKKANE 16 GI|2983601/1-89 95.2% 44.2% KIKGLKT----------SEVRKLLNTTKDEVI 17 GI|172241/1-104 97.6% 36.4% KIKGLHS---------DQIEEELGYNDSEYVA 18 GI|3183130|SP|O 96.4% 46.0% LIKGKRS---------KEIASILGYNETEYVA 19 GI|731646|SP|P3 97.6% 32.3% KIKGLPS---------EKIHDVLGYSVSEYVA 20 GI|3334438|SP|Q 95.2% 21.8% KILTTED--------EEIDYDFFYKRIFNAKI 21 GI|732334|SP|P3 100.0% 16.1% WTLTRNK-------HEQIDQAFFLSKLTKAAQ 22 GI|3256657|DBJ| 90.5% 29.8% NPQ----------------ARGTGVKMKRKSK 23 GI|3334439|SP|Q 96.4% 17.2% TLRK-----------EDLDENYIREKIIKANE 24 GI|3334140|SP|O 89.3% 17.9% TCD-----------------HGVVAKVKRCIM 25 GI|3915195|SP|Q 89.3% 19.0% NAD-----------------KGVAVDVERVYM 26 GI|2495775|SP|Q 90.5% 23.8% NM-----------------EKGKVVKVRFFIK 27 GI|3257142|DBJ| 89.3% 16.5% KEK----------------NRGKAVKVIHHAR 28 GI|2649170/1-79 88.1% 14.1% VR-----------------GKGKAVKNIHHIK 29 GI|3915180|SP|O 89.3% 22.6% AADG-----------------GLVIETRKVFM 30 GI|3915164|SP|O 89.3% 20.2% RLK-----------------KGIAADIQRVMM 31 GI|3914150|SP|O 89.3% 13.1% SVD-----------------HGVVAKSKRVIM 32 GI|3914156|SP|O 89.3% 9.5% SCD-----------------HGVVAKIKRVIM 33 GI|2621732/1-80 89.3% 17.6% ERD-----------------SGKAVKTIHHIG 34 GI|2129072|PIR| 89.3% 15.3% EAD-----------------KGKAIKNLHYVG 35 GI|3258435|DBJ| 89.3% 17.9% EA-----------------TRGLAVEVTLPKF 36 GI|4539267|EMB| 89.3% 14.6% ETN-----------------KGIGIENVHYLG 37 GI|2649908/1-76 89.3% 11.9% EME-----------------RGMAVKVRQGVK 38 GI|4680713|GB|A 90.5% 11.9% KVD----------------PMAIVVFHQADIG 39 GI|2132233|PIR| 90.5% 8.3% NMQPT----------------GIVAFRQADIG 40 GI|2854153/1-80 89.3% 15.7% SV-----------------NKGNGIENLHYLN 41 GI|3256521|DBJ| 81.0% 19.0% RAK-----------------KGIAVRVRKRVK 42 GI|1084581|PIR| 85.7% 14.3% SV--------------------NKGHSIELIH 43 GI|2650585/1-86 94.0% 9.5% NLP------------EDKVFVENLVDRGEYLR 44 GI|3257532|DBJ| 89.3% 11.9% VFQ-----------------YGRAVKVRKGVE 45 GI|2495984|SP|Q 89.3% 13.1% EF-----------------NYGLAVKVRGGLK 46 GI|2622794/1-67 82.1% 17.9% RAE-----------------RGVAVRVRRRTG 47 GI|1703574/1-77 90.5% 10.7% RAD----------------PTALVVLHQCDLG 48 GI|3123044|SP|O 89.3% 8.3% DL-----------------NHGQAVKTRKGGF 49 O29668 81.0% 7.1% E-------------------KGIAINVKRKFS 50 Q58805 79.8% 11.1% K------------------DKGWYLREGG--- 51 LIGA_MOUSE 86.9% 13.6% ASGL--------------KGKGVSVLHTYQDH consensus/100% ................................ consensus/90% ......................h.ht..t... consensus/80% ph..................thhhhp.tt.hh consensus/70% ph..................phhshchpphhh