cov pid 1 [ . . . . : . . . 80 1 170187.SP_0894_from_1_to_143 100.0% 100.0% MR--FNQYSYINFPKENVLSELKKCGFDLQNT---ANHKDSLETFLRRFFFTYQD---TNYPLSILAADKKTDLLTFFQS 2 388919.SSA_0328_from_1_to_143 100.0% 62.9% MR--FNQYSYAKTKRENMLIELAELGFFYDSN---RSDKENLEDFLRTSFFTYKN---TDYPLKSWAADSQTDLLSFFQS 3 467705.SGO_0234_from_1_to_143 100.0% 59.4% MR--YNQYSYTKASEEVMLDELARLGFTIQTT---NSPKENLHHFLQKILFRYQD---VNYVLSSWVADQKTDLLTFFQS 4 319701.M28_Spy1565_from_1_to_1 100.0% 47.6% MR--YNQFSYIPTSLERAAEELKELGFDLDLQ---KTAKANLESFLRKIFFHYPD---SDYPLSHLIAKNDMDALSFFQS 5 205921.SAK_1744_from_1_to_143 100.0% 46.9% MR--YNQFSYIPTKPNEAFEELKGLGFPLNKK---NSDKANLEAFLRHSFLNQTD---TDYALSLLIVDAKTDALTFFKS 6 264199.stu1672_from_1_to_143 100.0% 48.3% MK--FNQFSYIPVSPETAYQELRSLGFEVSLD---ASAKANFESFVRKYFLFFED---TDLALKNWIADPETDLLSFFQS 7 391295.SSU05_0197_from_1_to_14 100.0% 56.6% MR--FNQFSFIKKETSVYLQELDTLGFQLIPD---ASSKTNLETFVRKCHFLTAN---TDFALSNMIAEWDTDLLTFFQS 8 210007.SMU.395_from_1_to_145 100.0% 44.1% MK--YNQYSYIGTSVSQAEKELKELGFQISSQ---KTNKANLATFVSQVYFHNPD---KDDVFKSIIADSQTDLATFLHS 9 272623.L118079_from_1_to_143 95.1% 30.0% MR--FNHFSIVDKNFDEQLAELDQLGFRWSVF---WDEKKILKDFLIQSPTD----------MTVLQANTELDVIEFLKS 10 272621.LBA1373_from_1_to_156 100.0% 28.2% MK--YNQYAYVETDFDNQVRELIDINFLPRNY-EDWSFSDLLAKLVKNAIAEAKTDAAKSAKLSEFAVSDHETLTDFLKQ 11 257314.LJ1585_from_1_to_157 100.0% 23.6% MK--YNQYGYLKTDFDQMVKELQSINFLPNDW-KENSFSGLLATLVENSVAEAKTYGAKEAKLAEFAVSDHKNLKDFLAE 12 321956.LBUL_1351_from_1_to_156 100.0% 26.9% MK--YNQYAYVETSPEKATEELLAINFLPENY-SSLSFSELLAVLTGNVLAEATTRQAKDAKLAEFAVDDQTDLAAFLLD 13 314315.LSA0643_from_1_to_157 100.0% 21.0% MK--LNQFARLTTTYSEQIKALQRIKLLDEGY-EALSVQALAQQIFARFFPEAHSKTAQNEQMQKIQATASLNLADYLAG 14 321967.LSEI_1651_from_1_to_155 98.6% 24.2% MK--LNQFARLTPDFKVQVAELKQIGLQADPD-DTFSQS--TTDLFNAFFPEAYTLAAKKDKLAQVAVNMDQTLAAWLAK 15 220668.lp_0857_from_1_to_157 100.0% 22.9% MK--NNQFAIVPTDSETAIAELTKIHFITPDMDALTTVPAVYQALLAKSLPEVHTASGLTHKFNNIMATSQHTLSEWLAD 16 387344.LVIS_1782_from_1_to_159 100.0% 26.4% MR--NQQFAIRPTTLDQARVELQQIHFLDDTNLSFTTPSDLLRDFYDRSWPEYTTSSVVAQQLSNLMATPETDGLTYLTT 17 362948.LSL_1534_from_1_to_154 98.6% 32.1% MK--FNQFAHVKVPFEQKLAELNRIAFLHAGDEDLASN-HIYRLFLERAFPNFKTEAAKNHALSNLAATENADILTYLN- 18 299033.Lreu_1647_from_1_to_157 98.6% 30.2% MK--INQFSITSTTPQARRQELMQIHLLRKNEEQTLTPNAMFETFLARIHMASAQPIVTKQWLHDLLATPDLALDDWFDQ 19 278197.PEPE_0380_from_1_to_156 97.9% 26.4% MK--NNQFGRIRLDRTTELEELKNIHFI--DADLLADPKAQLKDFLKRSCLVSNSEATFQQKLSNLLATPDQTMAAFFES 20 203120.LEUM_0506_from_1_to_141 90.9% 28.6% M---INQYGRIAVDSATELEELRAVGFN----------SEDFETLLRRALTNYKTYEAQNDWLREHVATDEQNIFLFLET 21 203123.OEOE_1411_from_1_to_159 100.0% 23.3% MKNNFKYNAFTDDSFFDPFDELKRINLFDDSF-FENSFHDNLKIFFKRMFPNCHSFEAKKEAEKAILVNGKNDLSTYLER consensus/100% M....p..uhh.........tL.thth..............ht.hh.t...............t.h.sp.p.sh..ah.. consensus/90% M+...NQauhh.hp.p..htEL.tlth.........s.pt.ht.hhtp.h....s....p..ht.hhss.p.sh.tahtp consensus/80% M+..hNQauhh.ss.pp.htELtpltF..ts.....o.pt.hpthhtp.h.p.ts...hp..hpphhss.ptslhsahtp consensus/70% M+..hNQauhltss.ppthpELpplsF..ps....ho.pt.hpshlpp.hhphps...ps.hLpphhAsscpslhsahps cov pid 81 . 1 . . . . : . 160 1 170187.SP_0894_from_1_to_143 100.0% 100.0% -EDELTADIFYTVAFQLLGFSYLVDFED--SDVFRKETGFP------IIYGD--LIENLYQLLNTRTKKGNTLIDQLVSD 2 388919.SSA_0328_from_1_to_143 100.0% 62.9% -DRELTASVFYTVAFQLLEFSPFIDFTD--VEAFRQETDFP------ITFGD--LLENLYQLLNTRTKNGNLLIDKLVSE 3 467705.SGO_0234_from_1_to_143 100.0% 59.4% -DKQLTEEVFYTVALQVLGFAPFVDFDD--VTAFCKEIHFP------ITYGN--ILENLYQLLNTRTKLGNTLIDQLVSE 4 319701.M28_Spy1565_from_1_to_1 100.0% 47.6% -EQELSKEVFDLLALQVLGFIPGVDFTE--ADAFLDKLAFP------IHFDETEIIKHIHHLLATRCKSGMTLIDDLVSQ 5 205921.SAK_1744_from_1_to_143 100.0% 46.9% -NSDLTLENLQWIYLQLLGFVPFVDFKD--PKAFLQDINFP------VSYDN--IFQSLHHLLACRGKSGNTLIDQLVAD 6 264199.stu1672_from_1_to_143 100.0% 48.3% -DRPLTAEVFGLVALQLLGFVPNVDFTD--SVAFLEKMAFP------IAFDG--SLNNLHQLLATRTQSGNTLIDQLVAQ 7 391295.SSU05_0197_from_1_to_14 100.0% 56.6% -DRELTDQIFYQVAFQLLGFVPGMDYTD--VMDFVEKSNFP------IVYGD--IIDNLYQLLNTRTKSGNTLIDQLVSD 8 210007.SMU.395_from_1_to_145 100.0% 44.1% -DRELTEEIFYTIALQLLEFTPYIDFDE--AKTFIKHSHFP------IIFQPKHFLLNFYQLLGTRTKNGMTLIDKLVSQ 9 272623.L118079_from_1_to_143 95.1% 30.0% -SIELDWEIFWNITLQLLDFVPNFDFEIGKATEFAKKLNLPQRD---VEMTTETIISAFYYLLCSRRKSGMILVEHWVSE 10 272621.LBA1373_from_1_to_156 100.0% 28.2% KPESIGTAQFYNVALQLLGYHVHYDYDFADPTGFMQKTALPFV---QDINDTHKLISAFYRLLNTRTKNGQILLDVMAGK 11 257314.LJ1585_from_1_to_157 100.0% 23.6% NPNSISRNQFYNIALQLLGYHVGYDYDLNDPLARMKANALPYTD--QEEIDRNELVKVFYRLLNTRAKNGQTFIDNMAGK 12 321956.LBUL_1351_from_1_to_156 100.0% 26.9% TPTAITASQFANVALQLLGYHPNYDYSLTDPLTCGEKHALPAF---KDLTSKEELIFAFYRLLNTRSKNGQILLDVMAGK 13 314315.LSA0643_from_1_to_157 100.0% 21.0% ISTSFDQRTFYNIALQLLGFKVTTDFQFNHPRRFMAKVGIPYVD--QPVLTQELFLEAVYLLLTTRSQNGLLYLDCLANR 14 321967.LSEI_1651_from_1_to_155 98.6% 24.2% KPSKMTRRDFYNVALQLLGFEAFTDFDLNDPFKMMTATKLPSLD--HDLTSTADLLKAVYLLLNTRTKHLVSYLDDLANR 15 220668.lp_0857_from_1_to_157 100.0% 22.9% -ATIVNNQVFYNVGLQLLGFLPGQDFELADPLLAMRDIHLPMVG--DSAFDREALYYAWYLLLNTRGNNGQTLIESLTTR 16 387344.LVIS_1782_from_1_to_159 100.0% 26.4% -HEQVPVDVFYNLALQRLGFAVDLDFQLTDPLAAMTKIQLPVADHEGTTFTLNELMNAWYVLLTTHNKTGQTFLDQLTTH 17 362948.LSL_1534_from_1_to_154 98.6% 32.1% -SSKINARVFYAVGLQLLGFEAELDFDLKDPFSAMDKLNLPYQK---EIHHRDDVINAWYDLLCTSTKKGQNLLDILANR 18 299033.Lreu_1647_from_1_to_157 98.6% 30.2% -NQILTDEVFYLVALQLLDFEAAVDFDITASLATVKKIGLPVESHQKWTT--ANVIDAFYLLLNTHNKNGQSLIDHLTAE 19 278197.PEPE_0380_from_1_to_156 97.9% 26.4% -DQPLTLEIFILLELQLLQFEADTDYQIEDPLSAISKIQLPELDLKNFETS-ADVAHAWYNLLTTHTKNGEVYLDRLTQQ 20 203120.LEUM_0506_from_1_to_141 90.9% 28.6% -KQPLTQAVFYCIAAQLLGFTEALAGNGYNGVATFRQLGLPIATVN-------NLRHAWYELLNSHTNNGLLFIDELASQ 21 203123.OEOE_1411_from_1_to_159 100.0% 23.3% DFQSISAEDFYLVIDQLLDFNLGLEIDFGSGKQFLIDSGQQVLS--AVKIDSTNLADFLFNALILRSANGLSLIDNLVSD consensus/100% ....hs.t.h..l..QhLta....thp...s..hh.t.t................h..ha.hL..ptt.h..hl-.hstp consensus/90% ..p.ls.p.Fh.lthQlLta...hDap...s.thhpp.thP........ht...hh.sha.LLso+sppG..hlD.hssp consensus/80% ..p.lstp.Fh.luhQLLsF.s.hDap...shthhpchthP........hs...lhpshY.LLsT+spsG.hhlDpLssp consensus/70% .spplotphFYtlALQLLGFtsthDap...shshhpchshP.......hhsp..llpshYpLLsTRsKsG.sLlDpLsuc cov pid 161 ] 162 1 170187.SP_0894_from_1_to_143 100.0% 100.0% GL 2 388919.SSA_0328_from_1_to_143 100.0% 62.9% GL 3 467705.SGO_0234_from_1_to_143 100.0% 59.4% GF 4 319701.M28_Spy1565_from_1_to_1 100.0% 47.6% GM 5 205921.SAK_1744_from_1_to_143 100.0% 46.9% GL 6 264199.stu1672_from_1_to_143 100.0% 48.3% DL 7 391295.SSU05_0197_from_1_to_14 100.0% 56.6% DL 8 210007.SMU.395_from_1_to_145 100.0% 44.1% GF 9 272623.L118079_from_1_to_143 95.1% 30.0% GL 10 272621.LBA1373_from_1_to_156 100.0% 28.2% GY 11 257314.LJ1585_from_1_to_157 100.0% 23.6% GY 12 321956.LBUL_1351_from_1_to_156 100.0% 26.9% GY 13 314315.LSA0643_from_1_to_157 100.0% 21.0% GF 14 321967.LSEI_1651_from_1_to_155 98.6% 24.2% GF 15 220668.lp_0857_from_1_to_157 100.0% 22.9% GY 16 387344.LVIS_1782_from_1_to_159 100.0% 26.4% GY 17 362948.LSL_1534_from_1_to_154 98.6% 32.1% GY 18 299033.Lreu_1647_from_1_to_157 98.6% 30.2% GF 19 278197.PEPE_0380_from_1_to_156 97.9% 26.4% GY 20 203120.LEUM_0506_from_1_to_141 90.9% 28.6% GY 21 203123.OEOE_1411_from_1_to_159 100.0% 23.3% GF consensus/100% sh consensus/90% Gh consensus/80% Gh consensus/70% Gh