cov pid 1 [ . . . . : . . . 80 1 FIMB_ECOLI/11-183 100.0% 100.0% NFLTHSEIESLLKAANT-----GPHAARNYCL------TLLCFIHGFRASEICRLRISD-IDLKAKCIYI---------- 2 FIME_ECOLI/5-177 99.4% 50.9% RYLTGKEVQAMMQAVCY-----GATGARDYCL------ILLAYRHGMRISELLDLHYQD-LDLNEGRINI---------- 3 A6TJ12_KLEP7/116-317 95.4% 21.7% -VLTPDEVVRILGFLEG----------EHRLF------AQLLYGTGMRISEGLQLRVKD-LDFDHGTIIV---------- 4 A6TJ26_KLEP7/26-218 93.6% 15.8% KYLLAPEVSALLHYVPD---------LHRKML------LATLWNTGARINEALALTRGD-FSLAPPYPFVQLATLKQRTE 5 XERD_BACSU/110-284 99.4% 27.8% KVLALNEVERLLDTPKLT----SPFGYRDKAM------LELLYATGIRVSEMIELKTAD-VHLSMGFIRC---------- 6 XERD_ECOLI/111-286 99.4% 27.7% KDLSEAQVERLLQAPLID----QPLELRDKAM------LEVLYATGLRVSELVGLTMSD-ISLRQGVVRV---------- 7 XERD_HAEIN/110-285 99.4% 23.7% KYLTEQQVSDLLNTPNVE----VPLELRDKAM------LELLYATGLRVTELVSLTIEN-MSVQQGVVRV---------- 8 XERC_ECOLI/112-282 98.8% 26.0% KNIDVDDMNRLLDIDIN-----DPLAVRDRAM------LEVMYGAGLRLSELVGLDIKH-LDLESGEVWV---------- 9 XERC_HAEIN/109-279 98.8% 25.4% KNMDGEQVQQLLANDSK-----EPIDIRDRAI------LELMYSSGLRLSELQGLDLNS-INTRVREVRV---------- 10 XERC_MYCTU/109-284 97.7% 24.9% -VLRQDQALRAMAAAESGAEQGDPLALRDRLI------VELLYATGIRVSELCGLDVDD-IDTGHRLVRV---------- 11 XERC_BACSU/112-288 99.4% 29.8% KFLYQKELEELFEVSDIS----QPAGMRDQAL------LELLYATGMRVSECCSITIND-VDLFMDTVLV---------- 12 Y1424_HAEIN/134-298 90.8% 16.6% QRVTEENINAIVAISEYVD-TLKTAKARTAAA------ILFAVETAMRAGKICSLSWGN-VNFEKRTAFL---------- 13 RECR_BPP1/138-331 98.8% 15.8% ERTDFDQVRSLMENSDR------CQDIRNLAF------LGIAYNTLLRIAEIARIRVKDISRTDGGRMLIH--------- 14 VINT_BPP22/184-356 92.5% 17.2% RWLEPHEAKRLIDECQE----------PLKSV------VEFALSTGLRRSNIINLEWQQ-IDMQRKVAWIH--------- 15 INTD_ECOLI/184-356 92.5% 15.6% RWLEKEEAKRLIDECPE----------PLKSV------VKFALATGLRKSNIINLEWQQ-IDMQRRVAWVN--------- 16 VINT_LAMBD/179-345 93.1% 21.3% -RLTADEYLKIYQAAES-------SPCWLRLA------MELAVVTGQRVGDLCEMKWSD-I--VDGYLYV---------- 17 Q32DW2_SHIDS/173-340 93.6% 24.0% -RLTANEYVEIYHAAEP-------LPIWLRLA------MDLAVITGQRVGDLCRMKWSD-I--NDNHLHI---------- 18 INTA_ECOLI/212-380 93.1% 19.9% PSIRPDQLPQLMHTMRT-----ASISMSTRCL------FMWQLLTITRPAEAAEARWDE-IDFNASEWKIP--------- 19 INTS_ECOLI/199-365 93.6% 21.1% -FLPADQIPAFNKALAT-----FSGSIVSLIA------TKVLRYTALRTKELRSMLWKN-VDFENRIITID--------- 20 Q8B9H7_NPVR1/165-339 90.2% 14.4% --MLKNVIDTILNFINDKIKMLNSDYVHDRGLIRGAIVFCIMLGTGMRINEARQLSVDD-LNVLIKRGKLHS-------- 21 Q5HNP3_STAEQ/330-506 97.1% 19.4% -FIDEFVLEQLNSHLDK-------LPEYIATM------TMIVQECGMRISELCTLKKGCLLEDKDGDFFLK--------- 22 VINT_BPL2/105-275 96.5% 18.6% ERFYHDDLELIMTYTKNLN--SSKNSITYKSF------IRLLLDSGLRVSEALNIKISD-MDFKNKVIRV---------- 23 E1PK69_MAGIU/81-275 97.1% 22.3% -VLTEEQEEKLLAFAKA-------DKTYSKNYD----EILILLKTGLRISEFGGLTLPD-LDFENRLVNIDHQLLRD--T 24 Q5HNP2_STAEQ/167-344 94.8% 20.5% -TLRSKEVKQIIDACHT---------KRDKLI------LMLMYEGGLRIGEVLSLRLEDIVTWDNQIHLTPRDV------ consensus/100% ..h.......h.t..................h......h.h...th.R.tph.th.h.p..........h.......... consensus/90% ..h..tph.thht................h.h......h.hhh.suhRhschhthphtp.hp...t.hhl.......... consensus/80% ..l..pph.tlhth.t..........hh.thh......h.hhh.sGhRhu-hhtlphts.lpht.thhhl.......... consensus/70% .hlptpplpplhphspt.........hpp+sh......htlhhtTGhRluEhhpLphpc.lshptthhhl.......... cov pid 81 . 1 . . . . : . 160 1 FIMB_ECOLI/11-183 100.0% 100.0% -------HRLKKGFS------TTHPLL---NKEVQALKNWLSIR----TSYPHAESE----------------------W 2 FIME_ECOLI/5-177 99.4% 50.9% -------RRLKNGFS------TVHPLR---FDEREAVERWTQERA---NWKGADRTD----------------------A 3 A6TJ12_KLEP7/116-317 95.4% 21.7% -------REGKGSKD------RALMLP---ESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFW 4 A6TJ26_KLEP7/26-218 93.6% 15.8% KAARTAGRV-----PAGSQAHRLVPLS--DHHYVSQLQMMVATLK--IPLERRNKRT----------------------G 5 XERD_BACSU/110-284 99.4% 27.8% --------FGKGRKE------RIVPIG---EAAASAIEEYMTKAR--GKLLKNNVSD----------------------A 6 XERD_ECOLI/111-286 99.4% 27.7% --------IGKGNKE------RLVPLG---EEAVYWLETYLEHGR--PWLLNGVSID----------------------V 7 XERD_HAEIN/110-285 99.4% 23.7% --------IGKGNKE------RIVPMG---EEAAYWVRQFMLYGR--PVLLNGQSSD----------------------V 8 XERC_ECOLI/112-282 98.8% 26.0% --------MGKGSKE------RRLPIG---RNAVAWIEHWLDLR-----DLFGSEDD----------------------A 9 XERC_HAEIN/109-279 98.8% 25.4% --------IGKGNKE------RVVPFG---RYASHAIQEWLKVR-----ALFNPKDE----------------------A 10 XERC_MYCTU/109-284 97.7% 24.9% --------LGKGNKQ------RTVPFG---QPAADALHAWLVDGR--RALVTAESGH----------------------A 11 XERC_BACSU/112-288 99.4% 29.8% --------HGKGKKQ------RYIPFG---SYAREALKVYMNSGRQCLLMKAKEPHD----------------------L 12 Y1424_HAEIN/134-298 90.8% 16.6% -------PMTKNGTS------RTVPLTKNAIAILERLKVEIGDA------------G----------------------L 13 RECR_BPP1/138-331 98.8% 15.8% ------IGRTKTLVST---AGVEKALS---LGVTKLVERWISVS-----GVADDPNN----------------------Y 14 VINT_BPP22/184-356 92.5% 17.2% ------PEQSKSNHA------IGVALN---DTACRVLKKQIGNH-----------HK----------------------W 15 INTD_ECOLI/184-356 92.5% 15.6% ------PEESKSNRA------IGVALN---DTACKVLRDQIGKH-----------HK----------------------W 16 VINT_LAMBD/179-345 93.1% 21.3% -------EQSKTGVK------IAIPTALHIDALGISMKETLDKC------KEILGGE----------------------T 17 Q32DW2_SHIDS/173-340 93.6% 24.0% -------EQGKTGAK------LAIPLTLTIDALNISLVDTLQKC------REASSSE----------------------T 18 INTA_ECOLI/212-380 93.1% 19.9% ------AARMKMNRD------HTVPLSDGALAILEMMKPLSGGR------------E----------------------F 19 INTS_ECOLI/199-365 93.6% 21.1% ------ASVMKGRKI------HVVPMS---DQVVELLTTLSSIT--------KPVSE----------------------F 20 Q8B9H7_NPVR1/165-339 90.2% 14.4% -----DTINLKRKRS------RNNTLNNIKMKPLELAREIYSRN-----------PT----------------------I 21 Q5HNP3_STAEQ/330-506 97.1% 19.4% ------YYQWKMKKE------HIVPIS---KEVALLIKVREDKV-----SEEFPDSE----------------------Y 22 VINT_BPL2/105-275 96.5% 18.6% -------LSSKTRKQ------RYAPFS---SFSLKYIKELIEVN---------PKRD----------------------Y 23 E1PK69_MAGIU/81-275 97.1% 22.3% EIGYYIETPKTKSGE------RQVPMV---EEAYQAFKRVLANRKNDKRVEIDGYSD----------------------F 24 Q5HNP2_STAEQ/167-344 94.8% 20.5% ---NVNEAYIKLRKE------RTIHVS---KELMSLYTDYLIYE-----YSEELEHD----------------------Y consensus/100% .....................h...h..........h...................t......................h consensus/90% ..........K.tht......h.hshs......h..hp.....t............p......................h consensus/80% ..........Ktthp......hhhshs....thh.hhp.hht.t...........tp......................h consensus/70% .........hKsppp......+hlPhs...pthhphlcphhsht...........pc......................h cov pid 161 . . . 2 . . . . 240 1 FIMB_ECOLI/11-183 100.0% 100.0% VFLSR-----------KGNPLSRQQFYHIISTSGGN---AGLS------LEIHPHMLRHSCGFALANMGIDTRLIQDYLG 2 FIME_ECOLI/5-177 99.4% 50.9% IFISR-----------RGSRLSRQQAYRIIRDAGIE---AGTV------TQTHPHMLRHACGYELAERGADTRLIQDYLG 3 A6TJ12_KLEP7/116-317 95.4% 21.7% VFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQ---AGIT------KPATPHTLRHSFATALLRSGYDIRTVQDLLG 4 A6TJ26_KLEP7/26-218 93.6% 15.8% RMEKA-----------RIWEITDRTVRTWLSEAVEA---AAADGV-TFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMG 5 XERD_BACSU/110-284 99.4% 27.8% LFLNH-----------HGKQISRQGFWKNLKKIALE---AGIK------KELTPHTLRHSFATHLLENGADLRAVQEMLG 6 XERD_ECOLI/111-286 99.4% 27.7% LFPSQ-----------RAQQMTRQTFWHRIKHYAVL---AGID-----SEKLSPHVLRHAFATHLLNHGADLRVVQMLLG 7 XERD_HAEIN/110-285 99.4% 23.7% VFPSQ-----------RAQQMTRQTFWHRVKHYAIL---ADID-----ADALSPHVLRHAFATHLVNHGADLRVVQMLLG 8 XERC_ECOLI/112-282 98.8% 26.0% LFLSK-----------LGKRISARNVQKRFAEWGIK---QGLN------NHVHPHKLRHSFATHMLESSGDLRGVQELLG 9 XERC_HAEIN/109-279 98.8% 25.4% LFVSQ-----------LGNRISHRAIQKRLETWGIR---QGLN------SHLNPHKLRHSFATHMLEASSDLRAVQELLG 10 XERC_MYCTU/109-284 97.7% 24.9% LLLGA-----------RGRRLDVRQARTAVHQTVAA---VDGA------PDMGPHGLRHSAATHLLEGGADLRVVQELLG 11 XERC_BACSU/112-288 99.4% 29.8% LFVNQ-----------RGGPLTARGIRHILSGLVQK---ASST------LHIHPHMLRHTFATHLLNEGADLRSVQELLG 12 Y1424_HAEIN/134-298 90.8% 16.6% CFDIK-----------------SSVLDATFRKLKKL---AERE-------YLHFHDTRREALTRLSKKV-DVMTLAKISG 13 RECR_BPP1/138-331 98.8% 15.8% LFCRVRKNG--VAAPSATSQLSTRALEGIFEATHRLIYGAKDDSG-QRYLAWSGHSARVGAARDMARAGVSIPEIMQAGG 14 VINT_BPP22/184-356 92.5% 17.2% VFVYKESSTKPDGTKSPVVRKMRYDANTAWRAALKR---AGIE-------DFRFHDLRHTWASWLVQAGVPISVLQEMGG 15 INTD_ECOLI/184-356 92.5% 15.6% VFVHTKAAKRADGTSTPAVRKMRIDSKTSWLSACRR---AGIE-------DFRFHDLRHTWASWLIQSGVPLSVLQEMGG 16 VINT_LAMBD/179-345 93.1% 21.3% IIAST-----------RREPLSSGTVSRYFMRARKA---SGLSF---EGDPPTFHELR-SLSARLYEKQISDKFAQHLLG 17 Q32DW2_SHIDS/173-340 93.6% 24.0% IIASK-----------HHDPLSPKTVSKYFTKARNA---SGLSF---DGDPPTFHELR-SLSARLYRNQIGDKFAQRLLG 18 INTA_ECOLI/212-380 93.1% 19.9% IFPSRI---------KPNQPMNSQTVNAALKRAGLG-------------GVLVSHGLRSIASTALNEEGFPPDVIEAALA 19 INTS_ECOLI/199-365 93.6% 21.1% VFAGRN---------DKKKPICENAVLLVIKQIGYE----GLE---------SGHGFRHEFSTIMNEHEWPADAIEVQLA 20 Q8B9H7_NPVR1/165-339 90.2% 14.4% LQISK----------------NTSTPFKDFRRLLEE---SGVE-----MERPRSNMIRHYLSSNLYNSGVPLQKVAKLMN 21 Q5HNP3_STAEQ/330-506 97.1% 19.4% LFPRK-----------DGSPLKQETFRGELNKLAYE---QNIVDKSGEIYRFHAHAFRHTVGTRMINNGMPQHIVQKFLG 22 VINT_BPL2/105-275 96.5% 18.6% LFYNF----------IKDRQTNKNDIKLFYKRLKKH---LNLE-------RIHTHRFRKTFASILIENGLNIDDLQKIFD 23 E1PK69_MAGIU/81-275 97.1% 22.3% LFLNR-----------KNYPKVASDYNGMMKGLVKK---YNKYNE-DKLPHITPHSLRHTFCTNYANAGMNPKALQYIMG 24 Q5HNP2_STAEQ/167-344 94.8% 20.5% VFISLKE-------GYFGKPLKYQSVLDLVRRIVKR---TGIE--------FTSHMLRHTHATQLIREGWDVAFVQKRLG consensus/100% h............................h.t.h....................p.hR..h...h.....s...h....s consensus/90% lh.t................h..tth.t.htthh......t...........p.H.hR.thu..h.ptths.t.lt.hhu consensus/80% lh.pt............t..h.tpsh.thhpphh.t....sht........hp.H.hR+shusthhptuhs.phlpthhG consensus/70% lFhsp...........hsp.hsppsh.phhpphsht...sshp........hpsHtLRHshuopLhppGhshchlQchhG cov pid 241 : ] 258 1 FIMB_ECOLI/11-183 100.0% 100.0% HRNIRHT-VWYTASNAGR 2 FIME_ECOLI/5-177 99.4% 50.9% HRNIRHT-VRYTASNAA- 3 A6TJ12_KLEP7/116-317 95.4% 21.7% HSDVSTT-MIYTHVLK-- 4 A6TJ26_KLEP7/26-218 93.6% 15.8% HKSISST-EVYTKVFA-- 5 XERD_BACSU/110-284 99.4% 27.8% HADISTT-QIYTHVTKTR 6 XERD_ECOLI/111-286 99.4% 27.7% HSDLSTT-QIYTHVATER 7 XERD_HAEIN/110-285 99.4% 23.7% HTDLSTT-QIYTHVAKER 8 XERC_ECOLI/112-282 98.8% 26.0% HANLSTT-QIYTHLDFQH 9 XERC_HAEIN/109-279 98.8% 25.4% HSNLSTT-QIYTHLNFQH 10 XERC_MYCTU/109-284 97.7% 24.9% HSSLATT-QLYTHVAV-- 11 XERC_BACSU/112-288 99.4% 29.8% HSNLSST-QIYTHVSKEM 12 Y1424_HAEIN/134-298 90.8% 16.6% HKDISILQNVYYAPDMAE 13 RECR_BPP1/138-331 98.8% 15.8% WTNVNIV-MNYIRNLDSE 14 VINT_BPP22/184-356 92.5% 17.2% WESIEMV-RRYAHLAPNH 15 INTD_ECOLI/184-356 92.5% 15.6% WESIEMV-RRYAHLAPNH 16 VINT_LAMBD/179-345 93.1% 21.3% HKSDTMA-SQYRDD---- 17 Q32DW2_SHIDS/173-340 93.6% 24.0% HKSDSMA-ARYRDSR--- 18 INTA_ECOLI/212-380 93.1% 19.9% HVDKNEVRRAYNRSDYLE 19 INTS_ECOLI/199-365 93.6% 21.1% HANGGSVRGIYNHAQY-- 20 Q8B9H7_NPVR1/165-339 90.2% 14.4% HESSAST-KHYLNKY--- 21 Q5HNP3_STAEQ/330-506 97.1% 19.4% HESPEMT-SRYAHIFDE- 22 VINT_BPL2/105-275 96.5% 18.6% HSRIETT-IKYVQHNEKR 23 E1PK69_MAGIU/81-275 97.1% 22.3% HANIAMTLNYYAHATF-- 24 Q5HNP2_STAEQ/167-344 94.8% 20.5% HAHVQTTLNTYVHLSDQ- consensus/100% a.p.t.h...Y.t..... consensus/90% ats.t.s..hYht..... consensus/80% Htshp.s..hYhp..... consensus/70% Hpslshs.phYs+ht...