cov    pid  1 [        .         .         .         .         :         .         .       ] 78
 1 205921.SAK_2084_from_215_to_28 100.0% 100.0%    TLFNGFGDEGGRNVALTKFVGLL-------FNKWVDCDIETAYELTKIANS---VTANPLPERELDRTFESIARAEFR   
 2 319701.M28_Spy1804_from_215_to 100.0%  79.4%    TLFNGFGDEGGRNVALTKFVGLL-------FNKWVDCDLETAYELVQIANS---VTTKPLPIDEIDTTFRSILDKELR   
 3 370554.MGAS10750_Spy1909_from_ 100.0%  77.9%    TLFNGFGDEGGRNMALTKFVGLL-------FNKWVDCDVPTAYELARIANE---QTAEPLPVAELDNTFRSIVKAESR   
 4 322159.STER_0820_from_212_to_2 100.0%  72.1%    TLLHGFGDEGGRNVAVTRFVGLL-------LSKRVNADVATAYELTTIANS---VTNNPLPVEELARTFESIVKAEIR   
 5 193567.SPs0523_from_200_to_265  97.1%  50.0%    TIVLGFGDTGGRNNALAEFVGGL-------LLR--NVDVEIAYTLAKMANH---KTADPLSDKEFERTFKSMCDKELR   
 6 314315.LSA0594_from_198_to_262  95.6%  41.2%    TLTLGF-ETGRRNDTAAKITGQL-------LAY--GVDVRLAWQLVQYANG---NSSEPLLQNELERTFESIARRELG   
 7 273036.SAB0350_from_223_to_288  95.6%  27.5%    ELCFGT-TEGNRNNALASLVGHL-------LRC--HVNDYIVYSFALLWGQF--ACKPPMKEQEINATFQSILNKHYN   
 8 158878.SAV0790_from_223_to_287  95.6%  27.9%    DIAFGV-SEGERNSTLASITGYL-------LRR--YVDPNLVYGLVSAWAS---VCKPPINQSEVNNTFKSILKKDSK   
 9 279808.SH2094_from_225_to_289   95.6%  30.9%    SIAFGV-STGNRNQTLTSLIGVL-------LNR--RVPDPLVYAYCYMWNE---NCNPPMSSREFNATFESIYKREHR   
10 220668.lp_2474_from_198_to_263  95.6%  27.5%    EMVTGT-TQGNRNAWLTKIAGRM-------FGV--GAAPKTVYNMLSVINDS--FVDPALPSKEVNVIFRSILKRESK   
11 362948.LSL_1657_from_190_to_25  95.6%  30.4%    EIVNGV-DAGNRNNWIASIFGKL-------LRA--GASPKNAYSLLQLINDN--YVQPPLPAKELDNVAESILKRFIN   
12 220668.lp_3383_from_197_to_259  91.2%  36.2%    DLVAGT-GEGSRNSYLTSLLGKL-------LRT--GCNGMTAYELLQYANER---LQPPLPDKEVNTIFKSIIKR--T   
13 203119.Cthe_2847_from_199_to_2  97.1%  21.7%    SSIIAEIKEGNRNSTLTSLAGTM-------RARG-MTEES-IYAALLAENNA--RCNPPLDEAEVRKIAHSVSRYQPN   
14 203119.Cthe_1980_from_199_to_2  97.1%  18.8%    RSIVAGIKEGSRNSTLTSLAGTM-------RARG-MTEEG-IYTALLAENNA--RCNPPLDEAEIKKIYSLGFQRVSS   
15 323259.Mhun_1000_from_212_to_2  98.5%  24.6%    LYKNEVYQDGERNNALISLAGRL-------VGTG-ITDESELFRMLSDANNN--RCIPTLDEADVQRIARSALRYEPN   
16 370438.PTH_2505_from_201_to_26  95.6%  25.0%    VL-LRGVPEGQRDDACTRLAGYF-------IGKG-LPESE-VLALLLAWNQ---RNQPPMKERDVEKCVRSVSSRESR   
17 187272.Mlg_0791_from_208_to_27  94.1%  20.3%    D--GAVIPEGQRDSTLTREAGRL-------RRYG-YSESE-MLAALHAINSH--RCQPPLDADQVEKIARSVGRYDPA   
18 370438.PTH_1394_from_198_to_26  97.1%  20.6%    VRVLAGVPEGQRDVTLFRYACRL-------RTQG-LTREEALRLVLEAAR----NCTPPFPEREARLKVEQAWKYPEG   
19 267747.PPA1596_from_186_to_251  97.1%  23.5%    DASTQVIGEGSRNATLSRFAGRV-------LIR--YGQTAQARDLFDRKAS---LCEPPLSDHELESIWQSACRFAAK   
20 243164.DET0072_from_184_to_249  97.1%  23.5%    HRSTQVIPEGSRNATMSRFAGRV-------IKK--YGDSDAAFQCFLEEAA---KCSPPLEEAELMTIWHSAQRFFSK   
21 324831.LGAS_1475_from_219_to_2  97.1%  22.1%    KQKVGSIRQGKRNATLSHFAGRI-------IMR--LGNTPEARQAFQDEAA---KCEPPLGEQELRTIWHSAIKFGHR   
22 205921.SAK_0730_from_190_to_25  97.1%  23.5%    TPPTGPITEGSRNSTMSQFAAKI-------LKR--LGITQEARDGFDEQAL---KCDPPLDKTELDTIWGSAVRFYNR   
23 211110.gbs0367_from_259_to_324  95.6%  14.5%    ANIKGDKALMGRNNVLFTLALAN-------FSSG--VSQSDCEVVLADFNEH--LAEP-LSQDEFLKVIYSAYSGKYE   
24 435591.BDI_1511_from_228_to_28  91.2%  16.2%    AERKGLYAEGNRNNFIFVMAARA-------NRLG--VKRAEMEAYAATA-----FAD--LPAEERLAAIESAYSHVEE   
25 226186.BT_0404_from_228_to_291  92.6%  13.0%    YIFLNPLTAGQRHTNLFKLACEA-------CRRR--YSQE---SILRGITVY--FEHSDFPAQEIRSILQSGYQKVTS   
26 272559.BF2789_from_229_to_295   97.1%  15.9%    FDARNPFVAGGRHAFVLKLGRVA-------RYKG--FSPEEMRLLQKAVVEK--YAQADFGSGEIEKTLSSGYQYVSA   
27 227882.SAV4214_from_241_to_303  91.2%  23.2%    VQFVLAAHEGQRNTRLFWAACRA-------YENG--IGPD----LSPALIDA--AVHTGLSEREARSTLASAARMTGR   
28 196164.CE2160_from_231_to_291   88.2%  21.7%    VATVEQAGEGQRNNVLHWAACRA-------LEDG--LD------LTAELTTA--AQSIGLSDMEIQRTLASAANTVGR   
29 226186.BT_0709_from_237_to_300  92.6%  18.8%    YLTLYPAATGDRNGTVFRLSCAA-------CKRG--IDRN---ELTTELVRT--LEEDNFREPEIARTVKSAYQNVMT   
30 416870.llmg_0031_from_201_to_2  94.1%  23.5%    ELFNQGARKGNRNNDTNRILHYW-------RKIG--IDNNSCMDLLRTFNN---RTSPPLPDDELETIWKSVFKM--K   
31 331271.Bcen_0448_from_183_to_2  97.1%  20.3%    SRKTAIVPAGNRNQSVMLHAFSL-------LNGG--LDYERLEEELLEYNAA--CCNPPLSESEVSQVAVNVIRSHQE   
32 186103.spyM18_1288_from_225_to  94.1%  19.1%    YERVATGTSYNRNNDLFKGACWA-------FENG--IDIDDLTSIIGTVK-----GRDVFTREEFELTIESAKRKVSY   
33 281310.NTHI0425_from_139_to_21 100.0%  20.5%    FYLNDNEDIEGRNCSLFNQIKKIGYREVLKFKCSGKQLEQFNQYLLSSLELLNQNHNPPLPYRELKGIARSSSRWIWE   
34 300269.SSON_2661_from_85_to_15 100.0%  14.7%    RRSIDKHYGMGRNCHLFEMTRKWAYR---AIRQGWPEFSQWLDAVIQRVEMYNASLPVPLSPPECRAIGKSIAKYTHR   
35 100226.SCO5612_from_222_to_287  95.6%  20.3%    LRALPPDDPGRGNGWLTQVAGHL-------ARN--HTDHDSYLHELRAIDSE---SEVPHDKDRFMKTADSIWEREQA   
   consensus/100%                                  ..........ttp..h....h......................................h...ph..hh....p....   
   consensus/90%                                   ....t...tttRss.h..hhthh.......h.............hh..........t.sh..t-h.thhtSh.ph..t   
   consensus/80%                                   ..hht..ttGtRNshlhphsshh.......htp...hp.t.h.thh..hst....spsshsttEhpthhpShhph..p   
   consensus/70%                                   .hhhshhspGpRNsslhphssth.......hpp...ss.p.hhthhthhst...hspsPLsppElpphhcShhch..p