Family alignment for the RAP domain, displayed in

                                     cov    pid  1 [        .         .         .         .         :         .         .         . 80
 1 269797.Mbar_A2544_from_1306_to 100.0% 100.0%    IECDGE---SYYSLHVARDRDR--------------LRQQ------VLEGLGWKIYRVWSTDWYLHP-KESREKLLEAVR   
 2 262722.MHP7448_0064_from_1191_ 100.0%  50.9%    IECDGS---IFAKLKNARDRDI--------------LRKK------VLESRGWKIFRIWSIDWFQNP-KLQIKKIKEQLE   
 3 5833.PF14_0673_from_435_to_492  98.2%  22.0%    IEVDGP--SHFYANSNRYTTYT-------------KLKHR------ILTKLGYNVIHISYIDWRKL--RNKSEREEFILK   
 4 357244.OTBS_0849_from_400_to_4  96.5%  18.6%    IQVDGP--SHFDDN-NAPNFST-------------RLNTE------LLKSYGYIVHRIPYWVWNKL--KTNIAKEEYICE   
 5 5833.PFL1280w_from_1283_to_134  98.2%  23.7%    IEVDGI--SHFYKESFSRTINS-------------VIKDY------ILKKLGWNVIHIPYQEWNQC--FTFKKKVLYAIE   
 6 5833.PF13_0292_from_894_to_951  98.2%  18.6%    IEVNGE--HHFYKNTKSYISLS-------------KFKHK------LLSDLGYVVINIPYFDWAIL--NTDFDKKAYIKK   
 7 5833.PF11_0247_from_637_to_694  98.2%  16.9%    IELNAH--FQYYFNSESLTTLS-------------KWRHK------FLSQMGYKVIHISYRIWNNL--HNDTQKMEYIYS   
 8 5833.PF08_0070_from_792_to_849  98.2%  23.7%    IKCLGP--YSYYINSLVTTSIS-------------DLKLK------ILESKKYKVINLSYHDWNKL--NDYEEKIKFLYS   
 9 5833.PFF1400w_from_1307_to_136  98.2%  20.3%    IEINGH--NHYYYDKDMKRCYD-------------KIEAQNLIKY-YLLSKKYKLILVNYFEWVNL--STVEEKKEFLMK   
10 5833.PF14_0509_from_1647_to_17  98.2%  19.2%    IEIDGPS-HHFLVLNEMQKADPQRIKKTYIKCGTTIFKHW------LLQKSGWSIINVTSFEWNKI--NKDEKKKHIIKK   
11 5833.MAL7P1.23_from_1111_to_11  96.5%  12.3%    IEINGP--FHYKTK-SLSNHFP------LINT-KTILKKR------LLQFEDWDVISFPFWEIKPW--FSKTRKESYILK   
12 5833.PFE0905w_from_1310_to_136  98.2%  16.4%    IEIDGP--NHFFQKGEMIFYKS-----------NTLFKKR------LLRALGYTVISVPISDYTFM--FSALDTMHFTKR   
13 382253.COXBU7E912_0996_from_50  86.0%  19.0%    IEVDGP--YHMPAKDE--------------------FKER------LLRKLGYTVERVSYRDRDGD--KLEERINAIVD-   
14 5875.TP01_1230_from_333_to_391 100.0%  22.0%    WFIDGP--SCFYTSTTLYTNKV-------------KLQHR------ILNNLGWNIRRVQWYKWVDYM-NNTEDKINYIRK   
15 5833.PF10_0291_from_333_to_391 100.0%  23.7%    WFIDGP--SCFYTGTNQYTESV-------------KLQHR------ILYDLGWNIRRVVWIDWIQFG-DDTHQKIQYIKM   
16 10090.ENSMUSP00000099767_from_  98.2%  13.1%    IELLDV--RAFCSN-IPHLKGK------------SAMKKR------HLEILGYRVIQIPYFEWNSMAMSTKDARMDYLRE   
17 10141.ENSCPOP00000004476_from_  98.2%  13.1%    IKYLDS--KSFCTN-IPHLQGK------------SAMRKR------HLEILGYRLIQIPHFEWNSMALSVRGARMDYLRQ   
18 42254.ENSSARP00000008443_from_  98.2%   8.2%    LVFLDS--KAFCRN-IPHLKGK------------STMKKR------HLEILGYHVIQIPHFEWNSMALSTKDARMAYLRN   
19 13616.ENSMODP00000010047_from_  98.2%  11.5%    LEFLDS--RAFCKN-IPHLKGR------------SAMKIR------HLEILGYHVIQIPHLVWNSMELSTKDAWMKYLKE   
20 31033.SINFRUP00000149228_from_  98.2%  14.8%    IDFLDS--KCFCKN-SHHIKGE------------TLMRKR------HLEILGYRVVQIPHFEWNSMELSTQDAWKEYLKR   
21 7955.ENSDARP00000073017_from_7  98.2%  11.5%    LDFLDS--RSFCRN-TRHMKGE------------ATMKKR------HLEILGYHVLQIPHYEWNSMELSTDDAWKEYLKE   
22 9031.ENSGALP00000015983_from_7  98.2%  13.1%    LEFLDS--KAFSKD-SHHLKGE------------PAVKKR------HLEILGYRVIQIPHFEWNSMVLSTKPEQLDYLRK   
23 8364.ENSXETP00000041066_from_7  98.2%  13.1%    IEFLDS--KAFSKN-SSNIKGE------------YVMKKR------HLEILGYHVVQIASFEWNSMELSTKDAWIDYLRK   
24 7227.CG31643-PA_from_834_to_89 100.0%  19.7%    ILLLKL--DSFCENDLTALRGP------------ESLKMR------HLEMMGYKVMQINEHDWNSKYMASSTAKANYLKC   
25 9913.ENSBTAP00000021553_from_6  93.0%  11.5%    VLCVPK--SAYCLD-STHPKGY------------LAMKMR------HLKIMGFHVILVN--NWEVEKLEMKDA-VAFLKT   
26 9598.ENSPTRP00000021972_from_5  93.0%  13.1%    VLCVSR--SAYCLG-SSHPRGF------------LAMKMR------HLNAMGFHVILVN--NWEMDKLEMEDA-VTFLKT   
27 10141.ENSCPOP00000005070_from_  93.0%  16.4%    VLCVPK--SAYCLD-LSHPRGF------------LAMKIR------HLNIMGFHVVLVK--RWEMEKLKMEDA-ILFLKN   
28 43179.ENSSTOP00000002876_from_  93.0%  16.4%    VLCVPR--SVYCWD-SNPPRGS------------FAVKIR------HLNAMGFHVILVN--KWELEKLKMEDA-VTFLKT   
29 10116.ENSRNOP00000017281_from_  93.0%  14.8%    VLCVPK--SAYCLN-SNHLRGL------------MAMKIR------HLNVMGFHVILIH--NWELKKLKMEDA-VTFVRK   
30 9371.ENSETEP00000002537_from_6  93.0%  13.1%    VLCVRP--SSYCLE-STHPRGL------------LAMKMR------HLNIMGFHVILVN--TSEIERLEMKDA-ITWLKS   
31 9685.ENSFCAP00000014255_from_5  93.0%   9.8%    VLCVPR--STYCLD-LTHPRGF------------LAMKMR------HLKVMGFHVILVV--AVEIERLLMKDV-VTCFMT   
32 9365.ENSEEUP00000013936_from_3  93.0%  13.1%    ILCIPR--SVYCLN-STHPKGF------------FAMKLR------HLKLMGFHVIVVN--NWELEKLEMDDA-ITFLKN   
33 42254.ENSSARP00000009691_from_  93.0%  13.1%    ILCIPR--SVYCLD-SNHPRGL------------FATKMR------HLRAMGFRVVLIN--NWELEKLETKDA-VTLLKT   
34 13616.ENSMODP00000019964_from_  93.0%  13.1%    LLCVSR--SAFCLG-STHPRGK------------LGMKMR------HLRALGFHVILVN--FWEIKHLDMNSA-VTYLKA   
35 9031.ENSGALP00000013885_from_6  93.0%   8.2%    FLFVPP--SAFCLG-TTHPQGK------------LAMKKR------HLSKLGYHVIPVL--NKKFQELTNEGA-IEFLKG   
36 69293.ENSGACP00000019981_from_  91.2%  13.3%    VIYPPH--SAFCYG-TSNPRGP------------LAVKIR------HLKMLGYEPILVT--EEELQ--SEEDR-TVFLRR   
37 8090.ENSORLP00000006633_from_1  91.2%  15.0%    VIYVPN--SGFCFG-TSRLRGS------------LAVKIR------HLKILGYTPVLVT--EQDLR--CEEEA-ADILRR   
38 9544.ENSMMUP00000024674_from_5  96.5%  20.0%    LCIDGP--KRFCSN-SKHLLGK------------EAIKQR------HLRLLGYQVVQIPYYEIGML--KSRRELVEYLQR   
39 9986.ENSOCUP00000003130_from_5  94.7%  20.0%    LCIDGP--QRFCSN-GKHLLGK------------EAIKQR------HLQLLGYQVVQVPYHEIEVL--KSRLELVE-LQR   
40 9365.ENSEEUP00000005489_from_5  96.5%  16.7%    LCLDDA--RRFCLN-SRHLLGK------------EAAKQR------QLRLLGYHVVQIPYYEVELL--KSRLEMVGYLQR   
41 8364.ENSXETP00000015438_from_5  96.5%  15.0%    LCIDGQ--KRFCSN-THKLLGK------------ESIKQR------HLRLLGYEVIQIPFYEFDNL--SYKEEIVEYLHK   
42 13616.ENSMODP00000002551_from_  96.5%  10.0%    LCIDDP--KRFCLN-SHNLLGK------------EVIKQR------HLRLLGYEVIQIPFHEVDTL--QSRSKLVNYLKK   
43 8090.ENSORLP00000014289_from_4  96.5%  13.3%    LCIDGQ--RRFTSN-SRQLLGK------------ETMKQR------HLRLLGYEVAQIPYYEFEKL--HSKTSVVEYLHQ   
44 9031.ENSGALP00000021276_from_4  96.5%  20.0%    LCVDGQ--NRFCVN-SHNLLGE------------EAIKQR------HLQLLGYKVVQVPFFEVESI--KSCRKMAEYLHR   
45 69293.ENSGACP00000010065_from_  96.5%  13.3%    LCLDGE--KRFCSK-TQHLLGK------------EATKRR------HLRRMGYELVQIPYFEFEKL--RTLEEQVQYLHD   
46 69293.ENSGACP00000001952_from_  96.5%  13.3%    MSVNDK--WHYCHN-SEVLVGS------------RAMRDR------HLRLLGYVILQLPYPELEKL--NGIEEVKQYLHQ   
47 59463.ENSMLUP00000013408_from_  96.5%  10.0%    LMLQER--WHFCRD-SRVLLGS------------RALRER------HLGLLGYQLLPLPFEELESQ--RGLHQLKSYLRQ   
48 42254.ENSSARP00000002809_from_  98.2%  16.4%    IQLTNR--NQYCYG-SRHLLGL------------HSMKRR------QLNRLGYRVVELSYWEWLPLLKRTRLEKLAYLHE   
49 9361.ENSDNOP00000002113_from_7  98.2%  18.0%    IQLTNK--NQYCYG-SRRLLGL------------HSTKRR------QLARLGYCVVELPQWEWLPLLKRTRSEKLAFLHE   
50 8364.ENSXETP00000057043_from_4  98.2%  18.0%    IQVSNR--NHYCYA-SRHLLGL------------HNLKRR------QLQKLGYVVVELPYWEWFPLLKRTRSEKLAYLHQ   
51 8364.ENSXETP00000051449_from_2  96.5%  16.7%    FVAWDF--PNFNSR-SKDLLGR------------FVLTRR------HLQAAGFLVVEVPYYEWLDL--KSEWQKSAYLKD   
52 9371.ENSETEP00000004703_from_5  96.5%  13.3%    FLRWEF--SNFNSR-SKDLLGR------------FFMKRR------HMLAAGFLVIDVPYYEWLDL--KSEWQKGAYLKD   
53 31033.SINFRUP00000136617_from_  96.5%  16.7%    FLAWEF--PNFCSK-SRDLLGR------------FAMMKR------HLQLAGFITVEVPYYEWLEL--KTDRQKVAFLKD   
54 7159.AAEL010051-PA_from_505_to  98.2%   8.3%    LLVHDY--HDMCQGPNPSLNGV------------HALACR------LLEKSGYSVLSIPYSEFNTS--DKLLKRVEYLQR   
55 7165.AGAP002067-PA_from_508_to  98.2%   8.3%    LLVHDY--HDMCQGPHVALNGI------------QALNMR------LLEQEGYTVLSIPYNEFSTS--DKLLKRVEYLQK   
56 7159.AAEL013627-PA_from_585_to  94.7%  13.3%    VVAGGW--NCYVRN-QNRVTGG------------FAMKLK------QLGLVGFETVVIPWYEWPLD---SLEAKEAYLFN   
57 7165.AGAP000447-PA_from_574_to  94.7%  11.7%    IVVGSW--NCYVRD-ERRRTGG------------YAMKLE------QLRRLHYDTLEIPWYEWPVY---SRDDMRRYLEA   
58 5875.TP01_0362_from_86_to_143   96.5%  13.3%    WLCNSY--HRFYAT-TFNMTAN------------SKLLTK------LIKAFGYKVSIINYYQWGRM--KCKRTRFTFLRM   
59 5833.PF11_0153_from_530_to_587  96.5%  11.7%    WLCLSY--HHYYVR-TIDLTVE------------KLLQIN------LIKAMNYKISKIHYYQFSRM--KAKKTRFEYIRM   
60 5875.TP01_0349_from_460_to_533  96.5%  11.8%    IEIDGPYHYNILLDEEDCVHGDIIKYG----NINLRLNGKTIYRNNILAKLGYKLISIPWFVIHQY---NNDNVYNYIKN   
61 3702.AT2G31890.1_from_609_to_6  96.5%  20.0%    LEIDGP--THFSRN-SGLPLGH------------TMLKRR------YVAAAGWKVVSLSLQEWEEH--EGSHEQLEYLRE   
62 5875.TP01_1036_from_499_to_570  94.7%  16.0%    IEVDGP--YHYSTTLNPRINKILKREVEN-YQLGYTLNSKLKS--KLLTKSGFKFINIPFYQWPEA----TNEQIYFISN   
63 7159.AAEL008901-PA_from_600_to  98.2%  13.6%    LVMLPE----FFNSTGEHLIGS------------QAMRIR------HLRRLGLRVVTLRFDTLYKLK-VHPAELEKYLVE   
64 51511.ENSCSAVP00000013105_from  94.7%  15.0%    VVPLPR--SRFCIG-SRHAIGK------------TRLVLR------LLRAQGARVVVVPHFDWDGK---SSARKINLLRS   
65 5875.TP02_0485_from_394_to_455  96.5%   9.4%    LEVDGP--THFIRNLNDPSETRKIG--------PCDFKEK------MLKENGFVFISIPPIHSNTQ---NIKQIDEYYKE   
66 5833.PFE1295c_from_725_to_792   96.5%  10.0%    IEFNGRTHYNLLINKTSSNQHT--------CQMVENYNTKYKK--WLLSNYPFHIIYIPYYKWNML---THKQKEKYLME   
67 381764.Fnod_1356_from_1047_to_  98.2%  23.7%    VEVDGV--HHFVEDGRNYSESH-------------IERME------MLRRAGWKIINTPYYKWYNH--GWLDENSEILKR   
68 7159.AAEL000804-PA_from_551_to  94.7%  21.7%    VMCLPK--SYYALN-INRLRGR------------FAMYIR------MIEALGVAVVPVPYQMWSNL---PEAERLPFLER   
69 5833.PFE0800w_from_1014_to_107  96.5%  15.4%    VSIFGK--EYLMRTLKKSSWDFMNTG-------IVTLQMR------ILHAHGWKIIPINAGEWLQL---NFDQKKNLLSE   
70 5833.PFF0235c_from_1338_to_139  98.2%  20.6%    FEFLDE--DAYFKEPDNSSIDLLP---------SVNLKLT------LLKKLNFKIITIPFYEWNKC--YGRLEKVKSIYQ   
71 5833.PF10_0064_from_807_to_866  98.2%   9.8%    VLYNPY--KTFYND-TFFIKSN------------VLVKIN------FLLIKGYNIIAIPFYTWRNMSYEEKEKHVELLRK   
72 5833.MAL1P1.42_from_489_to_538  87.7%  19.3%    IDLDTI---------VRHTSFQ--------------MKHQ------HFEQLGYKTAKVHFWKWRKC--RSEKEQQNYLCD   
73 5833.PFF1045w_from_1544_to_160  98.2%  15.3%    IDLISY--EDVLYPSNKPLLSS-------------ELRQK------HLALKGWTVHSINFRDIYNS--IKDKNIISYIFN   
   consensus/100%                                  h..............................................h....h....h......................   
   consensus/90%                                   h.h.s.....h..t......................hp.p......hLt.hGa.hh.l...ph.........t..thl.p   
   consensus/80%                                   l.h.s....tah.t.p...hs..............hhp.+......hLphhGapll.ls..ph.......ptt.htalpp   
   consensus/70%                                   l.h.s...ptahhs.spp.hu..............th+h+......hLphhGaplltlsh.cap.h..ppppthhpaLpp   

                                     cov    pid 81 ] 81
 1 269797.Mbar_A2544_from_1306_to 100.0% 100.0%    K   
 2 262722.MHP7448_0064_from_1191_ 100.0%  50.9%    L   
 3 5833.PF14_0673_from_435_to_492  98.2%  22.0%    K   
 4 357244.OTBS_0849_from_400_to_4  96.5%  18.6%    L   
 5 5833.PFL1280w_from_1283_to_134  98.2%  23.7%    V   
 6 5833.PF13_0292_from_894_to_951  98.2%  18.6%    L   
 7 5833.PF11_0247_from_637_to_694  98.2%  16.9%    V   
 8 5833.PF08_0070_from_792_to_849  98.2%  23.7%    F   
 9 5833.PFF1400w_from_1307_to_136  98.2%  20.3%    K   
10 5833.PF14_0509_from_1647_to_17  98.2%  19.2%    L   
11 5833.MAL7P1.23_from_1111_to_11  96.5%  12.3%    M   
12 5833.PFE0905w_from_1310_to_136  98.2%  16.4%    L   
13 382253.COXBU7E912_0996_from_50  86.0%  19.0%    R   
14 5875.TP01_1230_from_333_to_391 100.0%  22.0%    L   
15 5833.PF10_0291_from_333_to_391 100.0%  23.7%    L   
16 10090.ENSMUSP00000099767_from_  98.2%  13.1%    H   
17 10141.ENSCPOP00000004476_from_  98.2%  13.1%    H   
18 42254.ENSSARP00000008443_from_  98.2%   8.2%    C   
19 13616.ENSMODP00000010047_from_  98.2%  11.5%    H   
20 31033.SINFRUP00000149228_from_  98.2%  14.8%    K   
21 7955.ENSDARP00000073017_from_7  98.2%  11.5%    K   
22 9031.ENSGALP00000015983_from_7  98.2%  13.1%    R   
23 8364.ENSXETP00000041066_from_7  98.2%  13.1%    R   
24 7227.CG31643-PA_from_834_to_89 100.0%  19.7%    L   
25 9913.ENSBTAP00000021553_from_6  93.0%  11.5%    K   
26 9598.ENSPTRP00000021972_from_5  93.0%  13.1%    K   
27 10141.ENSCPOP00000005070_from_  93.0%  16.4%    K   
28 43179.ENSSTOP00000002876_from_  93.0%  16.4%    K   
29 10116.ENSRNOP00000017281_from_  93.0%  14.8%    K   
30 9371.ENSETEP00000002537_from_6  93.0%  13.1%    K   
31 9685.ENSFCAP00000014255_from_5  93.0%   9.8%    E   
32 9365.ENSEEUP00000013936_from_3  93.0%  13.1%    E   
33 42254.ENSSARP00000009691_from_  93.0%  13.1%    E   
34 13616.ENSMODP00000019964_from_  93.0%  13.1%    K   
35 9031.ENSGALP00000013885_from_6  93.0%   8.2%    K   
36 69293.ENSGACP00000019981_from_  91.2%  13.3%    R   
37 8090.ENSORLP00000006633_from_1  91.2%  15.0%    R   
38 9544.ENSMMUP00000024674_from_5  96.5%  20.0%    K   
39 9986.ENSOCUP00000003130_from_5  94.7%  20.0%    K   
40 9365.ENSEEUP00000005489_from_5  96.5%  16.7%    K   
41 8364.ENSXETP00000015438_from_5  96.5%  15.0%    K   
42 13616.ENSMODP00000002551_from_  96.5%  10.0%    K   
43 8090.ENSORLP00000014289_from_4  96.5%  13.3%    K   
44 9031.ENSGALP00000021276_from_4  96.5%  20.0%    K   
45 69293.ENSGACP00000010065_from_  96.5%  13.3%    K   
46 69293.ENSGACP00000001952_from_  96.5%  13.3%    K   
47 59463.ENSMLUP00000013408_from_  96.5%  10.0%    K   
48 42254.ENSSARP00000002809_from_  98.2%  16.4%    K   
49 9361.ENSDNOP00000002113_from_7  98.2%  18.0%    K   
50 8364.ENSXETP00000057043_from_4  98.2%  18.0%    K   
51 8364.ENSXETP00000051449_from_2  96.5%  16.7%    K   
52 9371.ENSETEP00000004703_from_5  96.5%  13.3%    K   
53 31033.SINFRUP00000136617_from_  96.5%  16.7%    K   
54 7159.AAEL010051-PA_from_505_to  98.2%   8.3%    M   
55 7165.AGAP002067-PA_from_508_to  98.2%   8.3%    K   
56 7159.AAEL013627-PA_from_585_to  94.7%  13.3%    R   
57 7165.AGAP000447-PA_from_574_to  94.7%  11.7%    K   
58 5875.TP01_0362_from_86_to_143   96.5%  13.3%    A   
59 5833.PF11_0153_from_530_to_587  96.5%  11.7%    C   
60 5875.TP01_0349_from_460_to_533  96.5%  11.8%    V   
61 3702.AT2G31890.1_from_609_to_6  96.5%  20.0%    I   
62 5875.TP01_1036_from_499_to_570  94.7%  16.0%    L   
63 7159.AAEL008901-PA_from_600_to  98.2%  13.6%    R   
64 51511.ENSCSAVP00000013105_from  94.7%  15.0%    K   
65 5875.TP02_0485_from_394_to_455  96.5%   9.4%    L   
66 5833.PFE1295c_from_725_to_792   96.5%  10.0%    D   
67 381764.Fnod_1356_from_1047_to_  98.2%  23.7%    E   
68 7159.AAEL000804-PA_from_551_to  94.7%  21.7%    E   
69 5833.PFE0800w_from_1014_to_107  96.5%  15.4%    Y   
70 5833.PFF0235c_from_1338_to_139  98.2%  20.6%    K   
71 5833.PF10_0064_from_807_to_866  98.2%   9.8%    Q   
72 5833.MAL1P1.42_from_489_to_538  87.7%  19.3%    I   
73 5833.PFF1045w_from_1544_to_160  98.2%  15.3%    I   
   consensus/100%                                  .   
   consensus/90%                                   h   
   consensus/80%                                   h   
   consensus/70%                                   p