cov    pid   1 [        .         .         .         .         :         .         .         . 80 
 1 rho2_yeast      100.0% 100.0%     LVIIGDGACGKTSLLYVFTLGKFPEQYHPTVFENYVTDSRV------------------------------DGIKVSLTL    
 2 rac1_caeel      100.0%  45.4%     CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV------------------------------DGRPINLGL    
 3 rho3_yeast      100.0%  41.0%     IVILGDGACGKTSLLNVFTRGYFPEVYEPTVFENYIHDIFV------------------------------DSKHITLSL    
 4 RHO2_SCHPO-184  100.0%  60.3%     LVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRV------------------------------DGKSVQLAL    
 5 rho4_yeast       96.5%  43.4%     IVVVGDGAVGKTCLLISYVQGTFPTDYIPTIFENYVTNIEG-----------------------------PNGQIIELAL    
 6 RACD_DICDI-177  100.0%  41.4%     VVVVGDGAVGKTSLLILYTTKAFPKDYVPTVFDNFNCLEMY------------------------------DNKPVNLVL    
 7 RACB_DICDI-179  100.0%  44.8%     LVVVGDGAVGKTCLLISYTSNSFPTEYVPTVFDNYSANVMV------------------------------DNKTVSLGL    
 8 CEC35C5_3-191   100.0%  43.4%     CVVVGDGTVGKTCMLISYTTDSFPVQYVPTVAERYIHFRFD----------------------NYSAQMSLDGNVVNLGL    
 9 ATU88402_1-226   98.8%  45.1%     LVVVGDGAVGKTSLLISFAENKFPEDYVPTVFENYTSKITR-----------------------------DDGTLVLLHL    
10 g25b_human      100.0%  42.5%     CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMI------------------------------GGEPYTLGL    
11 crl1_canal       90.6%  47.3%     IVVVGDGGCGKTCLLLAYTQNKFPSIYVPTVFENYVTAVQS-----------------------------PNGKTVELAL    
12 YNS0_YEAST-220   98.8%  30.9%     CVIIGDGAVGKTSLLISYTTNSFPTDYVPTVFDNYSTTIAIPNGTASSPLELDNGNDKRGSLSSASSSPSTDRKLYKINL    
13 DMRAC1A_1-183   100.0%  46.0%     CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV------------------------------DAKPINLGL    
14 MMD821_1-193    100.0%  41.4%     VVLVGDGGCGKTSLMMVFAKGAFPESYSPTVFERYNATLQM------------------------------KGKPVHLQI    
15 CEF22E12_2-175   93.6%  29.1%     CIFVGNAAVGKTSMIVSYTTNVYPHNYVPTAFDNFSVVVLV------------------------------DKKPIRLQL    
16 RACB_ENTHI-163   93.6%  42.3%     ----GAGGVGKTCLLVSYTTNAFPTEYVPTVFDNYSATVMV------------------------------DSRPINLGL    
17 RHOG_HUMAN-179  100.0%  46.0%     CVVVGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQSAV------------------------------DGRTVNLNL    
18 RHO8_HUMAN-200  100.0%  40.0%     IVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEI------------------------------DTQRIELSL    
19 RACA_DICDI-162   94.2%  31.4%     DGAVGKSCLLIAYTTNAFPGEYVPTVFDNYSANVMIDGKPF-----------------------------------NLGL    
20 RACC_ENTHI-183   98.2%  42.4%     LVVVGDGAVGKTCLLICYTTNEFPKDYIPTVFDNYVVSLTA------------------------------GTRQIQLAL    
21 RACD_ENTHI-184  100.0%  40.8%     LVVVGDGSVGKTCLLICYTTNEFPKDYVPTVFDNYMAPMTV------------------------------DGEPINLGL    
22 RACC_DICDI-182  100.0%  44.3%     LVVIGDGAVGKTCLLISYANNRFPEDYIPTVFDNYVVNLTA------------------------------GDRNIELGL    
23 RACE_DICDI-185   98.8%  42.5%     LVVVGDGAVGKTCLLICYAQNDFPVDYVPTVFENYTATRKR------------------------------GNEDIKVHL    
24 RAC4_ARATH-179   98.8%  41.4%     CVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV------------------------------DGNTVNLGL    
25 SPAC16A10_4-193  99.4%  46.6%     LVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITY----------------------------GPNSKVIELAL    
26 TTF_HUMAN-173    94.7%  39.8%     CVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFM------------------------------DGIQISLGL    
27 rtc0_human      100.0%  41.4%     CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTV------------------------------GGKQYLLGL    
28 rho1_enthi       89.5%  37.3%     IVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKY------------------------------KNEEFILDL    
29 RHOL_DROME-178   95.3%  37.0%     ITIVGDGMVGKTCMLITYTRNEFPEEYIPTVFDNHACNIAV------------------------------DDRDYNLTL    
30 2225894-174      98.2%  36.2%     VGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGK---------------------------------QVELAL    
31 PT03615_1-180    95.3%  38.3%     LVIVGDGSVGKTCILIRYTEDKFPTDYVPTIFENYQAQVLY------------------------------ENKMVNLNL    
32 RACA_ENTHI-179  100.0%  43.1%     CVIVGDGAVGKTCLLISYTTNAFPNEYIPTVFDNYSATVMV------------------------------DSKPINLGL    
33 RHO6_HUMAN-190  100.0%  36.6%     LVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLET------------------------------EEQRVELSL    
34 RHO1_SCHPO-182  100.0%  55.2%     LVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEV------------------------------DGRHVELAL    
35 rho1_yeast      100.0%  54.0%     LVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEV------------------------------DGRRVELAL    
36 2353786-178     100.0%  38.3%     IVVVGDAECGKTALLQVFAKDAYPGSYVPTVFENYTASFEI------------------------------DKRRIELNM    
   consensus/100%                    ....uts.hhhh.hh.......h...h....h.............................................l.h    
   consensus/90%                     hshlGcutsGKTshl..asts.aPt.YhPTla-sa.....h..............................tt..hpLtL    
   consensus/80%                     hVlVGDGusGKTslLhsaspstFPptYlPTVF-Nasssh.h..............................ssp.lpLsL    
   consensus/70%                     hVlVGDGusGKTsLLlsaspstFPppYlPTVF-NYssshhh..............................csc.lpLsL    

                      cov    pid  81          .         1         .         .         .         .         :         . 160
 1 rho2_yeast      100.0% 100.0%     WDTAGQEEYERLRPFSYSKADIILIGFAVDNFESLINARTKWADEALRYCPDAPIVLVGLKKDLR-----QEAHFKENAT    
 2 rac1_caeel      100.0%  45.4%     WDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLR-----EDRDTVERLR    
 3 rho3_yeast      100.0%  41.0%     WDTAGQEEFDRLRSLSYSDTQCIMLCFSIDSRDSLENVQNKWVGEITDHCEGVKLVLVALECDLR--NNENESNAITPNN    
 4 RHO2_SCHPO-184  100.0%  60.3%     WDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLR-----SDPVAIEEMR    
 5 rho4_yeast       96.5%  43.4%     WDTAGQEEYSRLRPLSYTNADVLMVCYSVGSKTSLKNVEDLWFPEVKHFCPSTPIMLVGLKSDLY------EADNLSDLV    
 6 RACD_DICDI-177  100.0%  41.4%     WDTAGQEDYDNLRPLSYPQTDVFIICYSVVKRDSLDNIKYKWLPEINQTNQGTPIILVGTKTDLR-----EDKKTLSQLQ    
 7 RACB_DICDI-179  100.0%  44.8%     WDTAGQEDYDRLRPLSYPQTDVFLICFAIISQTSYTNVKSKWWPEVTHHCPNCTIILVGTKCDLR-----EDKESLEKLR    
 8 CEC35C5_3-191   100.0%  43.4%     WDTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVILVGTKLDLR-----DEAEPMRALQ    
 9 ATU88402_1-226   98.8%  45.1%     WDTAGQEDYDRLRPLSYPGADVILLCFSTVTASSFASIKEKWYPEVNHYVPDAPYILVGTKLDLR-------EAGLPDPS    
10 g25b_human      100.0%  42.5%     FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR-----DDPSTIEKLA    
11 crl1_canal       90.6%  47.3%     WDTAGQEEYDRLRPLSYPDVDILLVCFAVDNEVSLENVKDMWFPEVNHYCPGIPIILVGTKSDLL-------SDMNHDAS    
12 YNS0_YEAST-220   98.8%  30.9%     WDTAGQEDYDRLRPLCYPQTDIFLICFSVSEHASFANVTEKWLPELKQTSNIEGTSLYTKLGKYP-------ILLVGTKS    
13 DMRAC1A_1-183   100.0%  46.0%     WDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLR-----DDKNTIEKLR    
14 MMD821_1-193    100.0%  41.4%     WDTAGQDDYDRLRPLFYPDANVLLLCFDVTNPNSFDNVSNRWYPEVTHFCKGVPIIVVGCKIDLR-----KDKVLVNNLR    
15 CEF22E12_2-175   93.6%  29.1%     HDTAGQSSFDTLRPLCYTDADVFVIVYSVVDLQSFEDVSHHWYPEVTKRNPGTKLILVGTQADQR---WQVRGNTVTQLR    
16 RACB_ENTHI-163   93.6%  42.3%     WDTAGQEDYDRIRPLSYPQTDVFLLCFSVVSPPSFENISSKWKPEVSHHCPNAPCLLIGTKIDIR-----DEQTQTNKTC    
17 RHOG_HUMAN-179  100.0%  46.0%     WDTAGQEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKKDLR-----AQPDTLRRLK    
18 RHO8_HUMAN-200  100.0%  40.0%     WDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLR-----TDVSTLVELS    
19 RACA_DICDI-162   94.2%  31.4%     WDTAGQEDYDRLRPLSYPQTDVFLICFSIVSRASFENIRAKWYPEILHHAPNIPIVLVGTKNDLR---------GHHDLK    
20 RACC_ENTHI-183   98.2%  42.4%     WDTAGQEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGTKLDTR--------NDPAIVK    
21 RACD_ENTHI-184  100.0%  40.8%     WDTAGQEDSEQLRPLSYPNTDLFLLCFSVISRTSFNNISSKWLPEIKHYEPKCKMMVVGTNTDCR-----NDEAMIRKLA    
22 RACC_DICDI-182  100.0%  44.3%     WDTAGQEEYDKLRPLSYANANVFLICFSITNPVSFENVYTKWYPEVMHFCPEVPQILVGTKLDTR-----DDRGVLDKLQ    
23 RACE_DICDI-185   98.8%  42.5%     WDTAGQEEYDRLRPLSYPGADVVLLCFSTISQSSYEAIRDKWAPEVNHYIPDVPSILVGTKIDLR-------EQQHPDPN    
24 RAC4_ARATH-179   98.8%  41.4%     WDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLR-------DDKQFFID    
25 SPAC16A10_4-193  99.4%  46.6%     WDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLR-----KDRNATEVLR    
26 TTF_HUMAN-173    94.7%  39.8%     WDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQR-EMGPHRASCVNAME    
27 rtc0_human      100.0%  41.4%     YDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLR-----DDPKTLARLN    
28 rho1_enthi       89.5%  37.3%     WDTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHLYLILQRLKVDLRKDVS--------DDVTKQE    
29 RHOL_DROME-178   95.3%  37.0%     WDTAGQEDYERLRPLSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAHVPVVLVGTKLDLR----IPNSEKFVTTQ    
30 2225894-174      98.2%  36.2%     WDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR-----NDEHTRRELA    
31 PT03615_1-180    95.3%  38.3%     WDTAGQEEYKQLRSISYPQSDVFLITFSVDEPSSFQNAIKKWYPELQADQPNAPKIFIGNKIDMR------PTENVNENK    
32 RACA_ENTHI-179  100.0%  43.1%     WDTAGQEDYDRLRPLSYPQTDVFLICFSVVSPPSFDNVSSKWQPEVSHHCPKTPCLLVGTKLDMR-----EDKEQLKRLE    
33 RHO6_HUMAN-190  100.0%  36.6%     WDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLIGCKTDLR-----TDLSTLMELS    
34 RHO1_SCHPO-182  100.0%  55.2%     WDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLR-----NDPKIIEELS    
35 rho1_yeast      100.0%  54.0%     WDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR-----NDPQTIEQLR    
36 2353786-178     100.0%  38.3%     WDTSGSSYYDNVRPLAYPDSDAVLICFDISRPETLDSVLKKWQGETQEFCPNAKVVLVGCKLDMR-----TDLATLRELS    
   consensus/100%                    aDTuGp...pplRsh.Y..sphhhhsash....oh.sh...W..Eh.t........hhs...c.................    
   consensus/90%                     WDTAGpptacplRPLsYstsshhllsasl.p..Shtsl.t+WhsEl.ph..th.hllluhp.Dhp..........h...t    
   consensus/80%                     WDTAGQE-Y-pLRPLSYspsslhLlCFulss.sShpNltpKWhsElpcasstsshlLVGs+hDhR........t.htphp    
   consensus/70%                     WDTAGQE-YDRLRPLSYspsDlhLlCFulss.sSh-NlppKWhPElpcasPssPhlLVGsKhDlR......p.pthpphp    

                      cov    pid 161          .         .         .         2         .         .         .] 231
 1 rho2_yeast      100.0% 100.0%     -DEMVPIEDAKQ-----------------------VARAIGAKKYMECSALTGEG-VDDVFEVATRTSLLM    
 2 rac1_caeel      100.0%  45.4%     ERRLQPVSQTQGYV---------------------MAKEIKAVKYLECSALTQRG-LKQVFDEAIRAVVTP    
 3 rho3_yeast      100.0%  41.0%     IQQDNSVSNDNGNNINSTSN---GKNLISYEEGLAMAKKIGALRYLECSAKLNKG-VNEAFTEAARVALTA    
 4 RHO2_SCHPO-184  100.0%  60.3%     RRNQNFVKSQQAE---------------------LVAQRIGARKYMECSSLTGDG-VDDVFEAATRAALTV    
 5 rho4_yeast       96.5%  43.4%     EPSSAES----------------------------LAKRLGAFAHIQCSARLKEN-IDEVFETAIHTLLSD    
 6 RACD_DICDI-177  100.0%  41.4%     ESKQEPVSRDEGVA---------------------LAKEIGAVQFFECSALTGNG-VNDIFAAAIKAAFNK    
 7 RACB_DICDI-179  100.0%  44.8%     EKHQQPLTFQQGEQ---------------------MAKEIKAFCYMECSALTQKG-LKQVFDEAIKAVIFP    
 8 CEC35C5_3-191   100.0%  43.4%     AEGKSPISKTQGMK---------------------MAQKIKAVKYLECSALTQQG-LTQVFEDAVRSILHP    
 9 ATU88402_1-226   98.8%  45.1%     TGESDPVTPEKAEE---------------------MRKQIKALKYIEVSAKTRKN-LQTLFSEAVDIVLAE    
10 g25b_human      100.0%  42.5%     KNKQKPITPETAEK---------------------LARDLKAVKYVECSALTQRG-LKNVFDEAILAALEP    
11 crl1_canal       90.6%  47.3%     IR---------------------------------VAKEIGAIGLIFTSAKTMFN-VRTVFNFALNH----    
12 YNS0_YEAST-220   98.8%  30.9%     DLRDDPATQKKLQEAN--------SDYVSQEEIDELVQRCGFMGYTECSAATQAG-VREVFEQAVRYAIYE    
13 DMRAC1A_1-183   100.0%  46.0%     DKKLAPITYPQGSG---------------------HGKEIGAVKYLECSALTQKG-LKTVFDEAIRSVLCP    
14 MMD821_1-193    100.0%  41.4%     KKRLEPVTYHRGHD---------------------MARSVGAVAYLECSARLHDN-VEAVFQEAAEVALSS    
15 CEF22E12_2-175   93.6%  29.1%     GK--------------------------------ALADRLGA-EFFECSALTQHN-LKQMFDAAILAGLEG    
16 RACB_ENTHI-163   93.6%  42.3%     DKKIEPITSEQGEA---------------------KCKDIGALKYIECSALTQKN-LRYVFDEA-------    
17 RHOG_HUMAN-179  100.0%  46.0%     EQGQAPITPQQGQA---------------------LAKQIHAVRYLECSALQQDG-VKEVFAEAVRAVLNP    
18 RHO8_HUMAN-200  100.0%  40.0%     NHRQTPVSYDQGAN---------------------MAKQIGAATYIECSALQSENSVRDIFHVATLACVNK    
19 RACA_DICDI-162   94.2%  31.4%     RPEVSAAEANN------------------------LVRELGFSGYVETSALLQTN-LRELFSLAIRTATSP    
20 RACC_ENTHI-183   98.2%  42.4%     RLTEQGMTVINTAKGEE------------------LKNRIKAVKYIECSAKTSEN-LKTVFDEAVKTVLMN    
21 RACD_ENTHI-184  100.0%  40.8%     DENQKPITTEEGEK---------------------LAKDIKAICYMECSALTRSG-LNQVFDEAIHIVLNK    
22 RACC_DICDI-182  100.0%  44.3%     QTGHKPITTEQGND---------------------LARRIKAIKYMECSAKTSQN-LKQVFDEAIKSVLFI    
23 RACE_DICDI-185   98.8%  42.5%     SGKFEPITADMGIS---------------------MQKQIKAKKYLEVSAKTRQG-LEEVFSAAIEIVLES    
24 RAC4_ARATH-179   98.8%  41.4%     HPGAVPITTNQGEE---------------------LKKLIGSAVYIECSSKTQQN-VKAVFDAAIKVVLQP    
25 SPAC16A10_4-193  99.4%  46.6%     TQGLTPVTYQQAQS---------------------VALSMNA-PYVECSAKENTG-VNEVFQLAVGLTIKK    
26 TTF_HUMAN-173    94.7%  39.8%     GKK--------------------------------LAQDVRAKGYLECSALSNRG-VQQVFECAVRTAVNQ    
27 rtc0_human      100.0%  41.4%     DMKEKPICVEQGQK---------------------LAKEIGACCYVECSALTQKG-LKTVFDEAIIAILTP    
28 rho1_enthi       89.5%  37.3%     GDD--------------------------------LCQKLGCVAYIEASSVAKIG-LNEVFEKSV------    
29 RHOL_DROME-178   95.3%  37.0%     EGKK-------------------------------MRKEIHAFNLVECSAKKKQN-LQQVFEEAVRAVERK    
30 2225894-174      98.2%  36.2%     KMKQEPVKPEEGRD---------------------MANRIGAFGYMECSAKTKDG-VREVFEMATRAALQA    
31 PT03615_1-180    95.3%  38.3%     FVTFN---------------------------IAQKAVSDLGCKYIECSALNGTN-IKQIFLEAIKQAMKK    
32 RACA_ENTHI-179  100.0%  43.1%     EKKITPITTEQGEA---------------------KCKDIGAVKYIECSALTQKN-LRLVFDEAVRAVISP    
33 RHO6_HUMAN-190  100.0%  36.6%     HQKQAPISYEQGCA---------------------IAKQLGAEIYLEGSAFTSEKSIHSIFRTASMLCLNK    
34 RHO1_SCHPO-182  100.0%  55.2%     KTNQHPVTTEEGQA---------------------VAQKIGAYKYLECSAKTNEG-VREVFESATRAAMLK    
35 rho1_yeast      100.0%  54.0%     QEGQQPVTSQEGQS---------------------VADQIGATGYYECSAKTGYG-VREVFEAATRASLMG    
36 2353786-178     100.0%  38.3%     KQRLIPVTHEQGTV---------------------LAKQVGAVSYVECSSRSSERSVRDVFHVATVASLGR    
   consensus/100%                    ...................................h........hh.sSuh...t.lp.hF..u.......    
   consensus/90%                     ..t................................htppltu.tahEsSuh.tts.lptlFp.Ah......    
   consensus/80%                     t.t...hp...........................hsppltAhtYhECSAhppps.lpplFptAhhhsh..    
   consensus/70%                     ptp.tslp.pps.......................hucpltAhtYlECSAhopps.lcpVFctAhcsslt.