Family alignment for the RPOL9 domain, displayed in 

                     cov    pid  1 [        .         .         .         .         :         ] 60
 1 RPB9_HUMAN/14- 100.0% 100.0%    RFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNS-----CIYVNK-ITHEVDELTQI   
 2 Q9VFK8/18-72   100.0%  87.0%    RFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSN-----CIYVNK-IMHEIDELTHI   
 3 RPB9_YEAST/4-5 100.0%  46.3%    RFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSP-----LVYRHE-LITNIGETAGV   
 4 RPCZ_SCHPO/1-5  96.3%  24.1%    QFCPTCGNHLIVAVDEEGR-NAFDCRTCPYHFPISTF------LYSRH-EFAQKEVDDVL   
 5 RPOM_METJA/2-5  88.9%  24.1%    KFCPKCNNLMLPKDG------KLKCAVCGYEEETTAEGSK-EYEYKEH-LENKKEKITVI   
 6 RPCZ_YEAST/2-5  98.1%  27.8%    SFCPSCNNMLLITSGDSGVY-TLACRSCPYEFPIEGI-----EIYDRK-KLPRKEVDDVL   
 7 RPOM_SULAC/92-  96.3%  21.8%    KFCPKCGSMMMPRKENGKT--VYKCSKCAYIDTENQK----EAKITTV-IKHSAKAKTLV   
 8 RPOM_ARCFU/1-4  88.9%  27.8%    EFCPKCKSLMIYQGD------KLVCRKCGYEKEADDS-----EELVIK-VERNKEDVPVI   
 9 Q9N2U5/375-429 100.0%  68.5%    KFCPECNNMLYPREDKESRVLMYSCRNCEHREVAANP-----CIYVNK-LVHEIDELTQI   
10 RPA9_YEAST/7-5  96.3%  14.8%    IFCLDCGDLLENPNAVLGS--NVECSQCKAIYPKSQF-----SNLKVV-TTTADDAFPSS   
11 RPA9_SCHPO/7-5  90.7%  16.7%    IFCSECGNLLESTTAQ-----WTTCDQCQSVYPSEQF-----ANLVVE-TKSSASAFPSA   
12 O58397/2-56     92.6%  20.7%    KFCPRCGSIMIPDKKRG----VFVCRKCGYEEPINPEDAK-AYRRTEE-IKHKPDEGVIV   
13 Q9P9I8/2-53     88.9%  28.1%    EFCPKCNNIMLPKNG------RLKCTVCGFEEELGNRTE--EYELKEK-IEAKKQEVTVI   
14 AAK40629/4-57   96.3%  29.1%    KFCPKCNSMMVPKKSNGKN--VYRCTKCGYEKEVPETT----IVVTSK-VKHSIKEKTLV   
15 O74635/4-58    100.0%  48.1%    QYCIECNNMLYPREDKVDRVLRLACRNCDYSEIAATS-----KVYRHE-LQSSNVENTTV   
16 Q9UWZ9/15-71    96.3%  15.5%    KFCPKCGGLMVPSKKDGKE--ILKCSKCGYEMMLSEKEKK-EYSVKES-KDKSSKVLTTS   
17 AAK42105/1-49   88.9%  24.1%    RFCPKCGSFLKVKGN------KMVCSKCGYSDHDVEK-----VILKEN-VAHENDKTIIA   
18 Q9V960/2-52     92.6%  22.2%    FFCPSCGNILIIEEDTNCH--RFTCNTCPYISKIRRK-------ISTK-TFPRLKEVDHV   
19 Q9ZQC0/1-53     94.4%  16.4%    EFCPTCGNLLRYEGGGSS---RFFCSTCPYVANIERR-----VEIKKKQLLVKKSIEPVV   
20 Q9YDA4/1-55     96.3%  28.6%    KFCPKCGGVMLPRKDGEKR--LLVCGSCGYTIEAKPE---DLSRYKGV-EKVKDHVLTTK   
21 Q9HJG3/2-47     87.0%  18.5%    MFCPKCGSLMTPVNG------KYVCPSCGYEISKNKE------TIKIV-SKSADKETIMI   
22 Q9HS34/1-50     88.9%  21.8%    EFCDDCGSMMKADDE------LWVCSSCGHKQPKDPSA----SFVVTE-GQEETEVVDVS   
23 Q9Y2Y1/2-53     94.4%  20.4%    LFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRK------VTNRK-YPKLKEVDDVL   
24 Q9HP96/116-162  85.2%  20.4%    QFCDECGSMMHKQDG------EMVCASCGASADSEGS-------EGFV-ETASQDTSDVI   
25 RPOM_METTH/33-  87.0%  20.4%    EFCPKCGAVMFPSEG------KFKC-QCGYEKDITDK-----LKDKYR-VSEEVEAKETI   
26 Q9N4B7          94.4%  16.7%    TFCPECGCVLQIESGEQCM--RFSCPACPYVCPVTQT------VTSRI-YPKLKDIDDVL   
   consensus/100%                  .aC.tCtshh....t.......h.C..C................................   
   consensus/90%                   .FC.pCsshh..ttt......hh.C.tC.h....t.........h.......t.p.....   
   consensus/80%                   pFCscCsshhh.pps......hhhCtpCsa...htt........hh...h.tp.c..shh   
   consensus/70%                   pFCscCsshhhspps......hhhCppCsY.t.hspp.......hppp.h.pp.c.hshl