Family alignment for the RPOLA_N domain, displayed in

                      cov    pid   1 [        .         .         .         .         :         .         .         . 80 
  1 RPB1_SCHPO/238 100.0% 100.0%     DWMIITVLPVPPPSVR---PSISVDG---TSRGEDDLTHKLSDIIKAN--------------------ANVRRCEQE---    
  2 RPB0_ARATH/236 100.0%  66.0%     DWMILEVLPIPPPPVR---PSVMMDA---TSRSEDDLTHQLAMIIRHN--------------------ENLKRQEKN---    
  3 O59227/211-876  99.7%  55.2%     EWMVLTVLPVPPVTVR---PSITLET---GIRAEDDLTHKLVDIIRIN--------------------NRLRQNIEA---    
  4 RPA1_THECE/211 100.0%  55.1%     EWMVLTVLPVPPVTMR---PSITLES---GIRAEDDLTHKLVDIIRIN--------------------NRLKSNIEA---    
  5 RPA1_METTH/201  99.7%  53.9%     EWMVLTVLPVPPVTVR---PSITLET---GERSEDDLTHKLVDILRIN--------------------QRLKENMEA---    
  6 I38186/246-895 100.0%  70.4%     EWMIVTVLPVPPLSVR---PAVVMQG---SARNQDDLTHKLADIVKIN--------------------NQLRRNEQN---    
  7 RPA1_SULAC/205 100.0%  56.9%     EWMILTVLPVPPITIR---PSITIES---GIRAEDDLTHKLVDIIRLN--------------------ERLKESIEA---    
  8 O28391/200-840  99.3%  53.1%     EWFVLTVLPVPPVTVR---PSIILET---GQRSEDDLTHKLVDIIRIN--------------------QRFMENKEA---    
  9 RPB1_YEAST/232 100.0%  77.6%     EWMILTCLPVPPPPVR---PSISFNE---SQRGEDDLTFKLADILKAN--------------------ISLETLEHN---    
 10 O96446/203-874  99.3%  67.8%     EWLILTVLLVPPPSVR---PSIVMEG---MLRAEDDLTHKLADIVKAN--------------------TYLKKYELE---    
 11 AAK40566/205-8 100.0%  57.5%     EWMILTVLPVPPITIR---PSIMIES---GIRAEDDLTHKLVDIVRIN--------------------ERLKESIDA---    
 12 O00820/160-801 100.0%  71.5%     DWMIITIMPIPPPPVR---PSITMDS---AARGEDDLTHKLADIIKAN--------------------ANLRKQEAN---    
 13 Q9HGZ5/244-892 100.0%  74.9%     EWMVLTVLPVPPPPVR---PSVLVGGSTSGQRGEDDLTYKLAEIVRAN--------------------QNVQRCEQE---    
 14 RPC1_HUMAN/248  99.7%  46.3%     SDLILTRLLVPPLCFR---PSVVSDLK--SGTNEDDLTMKLTEIIFLN--------------------DVIKKHRIS---    
 15 AAK00312/167-8 100.0%  68.5%     EWMIITVLPVPPPQVR---PSVVGDGT--GLRSQDDLTYKLADILKAN--------------------ASLKRHEQD---    
 16 Q18566/244-902  99.7%  45.6%     NDLLLTRMPVPPVCIR---PSVVSEVK--AGTTEDDVTMKLMEIMLTN--------------------DVLKKHKRD---    
 17 Q23699/157-806 100.0%  66.8%     DWMIVTVMPVPPLAVR---PAVVMFG---SARNQDDLTHKLADIIKAN--------------------NQLRRNEQN---    
 18 RPA1_METVA/208 100.0%  51.4%     EYMVLTVLPVPPVTVR---PSITLES---GERSEDDLTHKLVDIIRIN--------------------QRLEENING---    
 19 Q25203/160-809 100.0%  66.4%     DWMILTVFPVPPLPVR---PAVVMFG---SARNQDDLTHKLADIVKAN--------------------NQLRRNEQN---    
 20 RPC1_SCHPO/244  99.3%  44.8%     ENLLWRYVPAPPVCIR---PSVAQEG----ATTEDDLTVKITEIIWTS--------------------SLIRAALSK---    
 21 RPC1_YEAST/254 100.0%  45.2%     ETYIWRYLPAPPVCIR---PSVMMQDS--PASNEDDLTVKLTEIVWTS--------------------SLIKAGLDK---    
 22 RPA1_HALHA/277 100.0%  52.5%     EWMILTVLPVPPVTAR---PSITLDN---GQRSEDDLTHKLVDIIRIN--------------------QRFMENREA---    
 23 O96452/201-827  99.3%  65.8%     EYMILSVLLVAPPAVR---PSIVMEG---TLRGEDDLTYKYSDIIKSN--------------------QNLKKYEEE---    
 24 Q17085/158-807 100.0%  67.1%     DWMILTVIPVPPLNVR---PTVIMFG---SAKGHDDLTYKLGDIIKAN--------------------NELIRNEES---    
 25 Q25151/153-802 100.0%  64.5%     DWLIATMLPVPPLPVR---PAVVMFG---SAKNQDDLTHKLADIIKIN--------------------NQLKRNEMN---    
 26 AAK00310/218-8 100.0%  62.8%     EWFILTLFPVPPPHIR---PSVMMDA---SMRGEDDLTYKLGDIVRNN--------------------NALREMERT---    
 27 RPA1_THEAC/207 100.0%  48.7%     EWMVLTVLPVPPINVR---PSITLET---GERSEDDLTHKLVDIIRIS--------------------QRLRESRDN---    
 28 Q27095/244-890 100.0%  54.4%     KWMILKILPVPPLAVR---PQVVSPGQ--SAPSQDDITHKLSDIIICN--------------------KRLRAQRSE---    
 29 Q20090/240-885  98.7%  65.5%     EWMICTVLPVPPLAVR---PAVVTFG---SAKNQDDLTHKLSDIIKTN--------------------QQLQRNEAN---    
 30 O09451/140-784  99.7%  65.6%     EWLILTLLPVPPPQVR---PSVMRGG----LRNEDDLTNKLGDIVKNN--------------------NTLRNLEAT---    
 31 AAK00309/141-7  99.7%  65.2%     ENLILTVLPVPPLQVR---PSVMHGG----LRNEDDLTNKLGDIVKNN--------------------NMLRDMEAQ---    
 32 O04142/158-802 100.0%  69.1%     EWLILTLLPVPPPHVR---TSIMMDA---TQRGEDDLTHNLAVIVKNN--------------------TALRNLEGH---    
 33 RPB2_TRYBB/242  98.7%  53.3%     RDLVLTVLPVPPPQVR---PAISFGG----LRSDDELTHQIMSIVKRN--------------------NQLRRDKE----    
 34 Q9YAU1/216-866 100.0%  49.8%     EWMVATVLIVPPLAVR---PSITLET---GLRSEDDLTHALAEIVRQN--------------------EKLRNVIVT---    
 35 RPC1_TRYBB/256  98.4%  41.4%     TDLLMTTLLVPPVPVR---PRGCAGT---TTVRDDDLTAQYNDILVST--------------------DTMQDGS-----    
 36 RPA1_MOUSE/302  99.3%  28.0%     SMFFLDFIVVPPSRYR---PVNRLGD----QMFTNGQTVNLQAVMKDA--------------------VLIRKLLALMAQ    
 37 4995/358-1067   99.3%  30.4%     DMFFLQNIAVPPTRFR---PASKMGD----EVHENIQNELLTRILQSS--------------------IQIASLSKDSTV    
 38 O77375/266-102  99.7%  60.9%     ASLILTCIPIPPPCAR---PYVQYGN----QRSEDDLTLKLLDIVKTN--------------------IQLKRQTDR---    
 39 AAK00311/165-8 100.0%  60.2%     DFMIIEVLPVPPLAVR---PSVELGE---SGHSADDLTYQLGDIIKTN--------------------ISLQENIAN---    
 40 AAK00313/133-7 100.0%  63.2%     ENMIIKNLAVAPPPVR---PSVSMSN---TMRSEDDLTYCYQKILQTN--------------------ITLQNQINR---    
 41 O61119/163-757 100.0%  77.0%     DWMIATVLPVPPPPVR---PSIMMDT---STRGEDDLTHKLADIVKAN--------------------RELQRQEKN---    
 42 13310932/218-8  98.7%  52.6%     RDLILTVLPIPPPQVR---PAVAFAS----AKSDDELTHQIMSIVKRN--------------------IQLRKDKE----    
 43 O17628/351-105  99.7%  29.8%     DGLFLERILVPPKKFR---PIRMFKG----AQYEDPQTLNLRKVLEAT--------------------ETISAISLIMKG    
 44 RPA1_HUMAN/295  99.3%  28.3%     SVFFLDFLVVPPSRSR---PVSRLGD----QMFTNGQTVNLQAVMKDV--------------------VLIRKLLALMAQ    
 45 RPA1_DROME/293  98.7%  32.2%     DLFFMDTLPVTPPRAR---PLNMVGD----MLKGNPQTDIYINIIENN--------------------HVLNVVLKYMK-    
 46 RPA1_YEAST/353  99.7%  34.2%     DSFFMDVLVVPPTRFR---LPSKLGE----EVHENSQNQLLSKVLTTS--------------------LLIRDLNDDLSK    
 47 AAK15346/218-8  98.7%  52.3%     RDLILTVVPIPPPQVR---PAVAFGS----AKSDDELTHQIMSIVKRE--------------------HQLRKDKE----    
 48 G69698/224-835  90.8%  31.2%     SWMILDVLPVIPPELR---PMVQLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLDLG--    
 49 CAC33868/123-8  99.3%  65.5%     EWMIISVLNVPPPAVR---PSVVLEG---MLRGEDDLTHKLADIVKAN--------------------ANLAKYERE---    
 50 O77165/146-800  98.0%  57.2%     EWMMITLLPVPPMTVR---PSIAFGS---VGRAEDDLTKQLSTIVKNN--------------------AQIRKLKLDG--    
 51 Q9HWC9/235-831  90.8%  30.2%     EWMVLTVLPVLPPDLR---PLVPLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLDLA--    
 52 RPOC_AQUPY/366  90.5%  28.9%     EWMILEVLPVIPPELR---PLVALDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLIELS--    
 53 12722150/236-8  90.8%  28.9%     EWMVMTVLPVLPPDLR---PLVPLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLDLI--    
 54 CAC27103/217-8 100.0%  61.2%     DWMIITVLPVPPPTIR---PSVKFET---LLRAEDDLTYKLGDIIRTN--------------------KILRKAIFS---    
 55 RPOC_BACHD/224  90.8%  31.2%     SWMILDVLPVIPPELR---PMVQLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLDLG--    
 56 RPOC_BACAN/224  90.8%  31.5%     SWMILDVLPVIPPELR---PMVQLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLDLG--    
 57 RPOC_ECOLI/235  90.8%  30.2%     EWMILTVLPVLPPDLR---PLVPLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLDLA--    
 58 CAC33863/114-7  99.0%  66.4%     SSLLISSVLVVPPACR---PSISLEG---FLRAEDDLTHKLSDIIKSN--------------------KTLRKNEAE---    
 59 RPOC_RICPR/235  91.1%  29.0%     EWMIMDVLPVIPPEIR---PLVMLDG---GRFATSDLNELYRRVINRN--------------------NRLKKLIES---    
 60 Q9KV29/235-831  90.8%  30.5%     EWMILTVLPVLPPDLR---PLVPLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLELA--    
 61 Q9KW13/235-831  90.8%  30.8%     EWMILKVLPVLPPDLR---PLVPLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLDLA--    
 62 CAC33864/178-8  98.7%  62.7%     EWMVISVLNVSPPAVR---PSVVLEG---MLRGEDDLTHKLADIVKAN--------------------TNLAKYERE---    
 63 Q9LVH0/251-907  98.7%  42.7%     ENLIITCMLVPPLSIR---PSVMIGG---IQSNENDLTARLKQIILGN--------------------ASLHKILSQP--    
 64 RPOC_PSEPU/246  90.8%  28.9%     EWMVLTVLPVVPAPLG---PLVPLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRQLDLS--    
 65 O25806/1624-21  90.8%  32.8%     EWMMLTVLPVLPPDLR---PLVALDG---GKFAVSDVNELYRRVINRN--------------------QRLKRLMELG--    
 66 RPOC_LISMU/224  90.8%  31.2%     SWMILDVLPVIPPEIR---PMVQLEG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLDLG--    
 67 RPOC_BORBU/224  90.8%  28.2%     EWMIMEVLPVIPPEIR---PMVQLDG---GRFATSDLNDLYRRVINRN--------------------NRLRKLLLLN--    
 68 Q9K1J1/237-833  90.8%  28.9%     EWMIMDVLPVLPPDLR---PLVPLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLELH--    
 69 AAK22490/237-8  90.8%  30.2%     EWMVLTVVPVIPPELR---PLVPLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLIELR--    
 70 RPOC_TREPA/224  90.8%  27.9%     EWMILSVIPVIPPDLR---PMVQLDG---GRFATSDLNDLYRRVIHRN--------------------SRLIRLMELK--    
 71 CAC33856/129-7  99.0%  63.2%     EWMIISVLNVTPMSVR---PSVVLEG---TLRGEDDLTHKLSDIVKCN--------------------KNLERYEKE---    
 72 7189607/242-83  90.8%  29.5%     EWMVLKNIPVVPPDLR---PLVPLDG---GRFATSDLNDLYRRVINRN--------------------NRLKAILRLK--    
 73 Q9PA87/258-854  90.8%  30.8%     EWMILTVLPVLPPDLR---PLVPLDG---GRFATSDLNDLYRRVINRN--------------------NRLCRLLELS--    
 74 BAB41732/224-8  90.8%  30.5%     SWMILDVLPIIPPEIR---PMVQLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLDLG--    
 75 A45597/244-101  99.3%  32.3%     EKLIITALLVPPNTIR---PSVIIDE---HGTAEDDLTCILSEITQLN--------------------NTIYNQC-----    
 76 14021284/237-8  90.8%  29.5%     EWMIMKVVPVIPPDLR---PLVPLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLIELR--    
 77 RPOC_MYCLE/310  90.8%  28.6%     MGMVLDAVPVIPPELR---PMVQLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLIDLG--    
 78 RPOC_THEMA/519  92.8%  29.6%     EWMVLEVVPVIPPDLR---PMIQIEG---GRFATTDLNELYRRLINRN--------------------NRLKKLLELG--    
 79 RPOC_CAMJE/257  90.8%  30.5%     EWMMITNLPVLPPDLR---PLVALDG---GKFAVSDVNDLYRRVINRN--------------------TRLKKLMELD--    
 80 RPOC_BROTH/224  90.8%  30.8%     SWMVLDVLPVIPPEIR---PMVQLEG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLDLG--    
 81 12724824/216-8  90.8%  31.8%     SWMVLNVLPVIPPDLR---PMVQLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLMELN--    
 82 Q26793/371-105  98.0%  30.6%     KLFFLDRILVPPLPLRL-SSGVRVNDN--GLIIPDEQTRALSDILGFV--------------------EQIECFH-----    
 83 Q9L0K9/310-901  90.8%  28.2%     KGMVLDCVPVIPPDLR---PMVQLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLDLG--    
 84 Q89506/216-991  99.7%  28.5%     KDFCLEVFPVIPSCCR---PHEVQDG----NINDDDLTYQLMEIVKNNSMIGAIKLEKESMEKQYPECLKVKEILLLSNV    
 85 AAK33217/225-8  90.8%  31.2%     EWMVLNILPVIPPDLR---PMVQLDG---GRFAASDLNDLYRRVINRN--------------------NRLARLLELN--    
 86 RPOC_BUCAI/235  90.8%  29.9%     EWMILNVLPVLPPDLR---PLVPLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLDLA--    
 87 RPOC_MYCGE/297  93.8%  28.8%     KNMILHTVPVIPPDIR---PIIQLDG---AKFTTSDINNFYRRVIIRN--------------------DRLRRILEDGT-    
 88 T10432/224-835  90.8%  29.9%     DWMVMDAIPVMPPDLR---PMVQLDG---GRFATSDLKHLYRRVINRN--------------------NRLKRLLDLN--    
 89 RPOC_WEIPA/158  90.8%  30.2%     EWMVMDVIPIIPPDLR---PMVQLEG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLELN--    
 90 RPOC_OENOE/159  92.1%  31.5%     EWMVMDVVPVIPPDLR---PMVQLEG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLDLN--    
 91 RPO1_ASFB7/194  98.4%  32.2%     EKLVLKAIQIPPISIR---PGIRLGIG-SGPQSFHDINNVIQYLVRKN--------------------LLIPKDLQIVR-    
 92 Q9VXP9/247-780  99.7%  45.9%     KHLIVTRVFVPPACIR---PSVLSEVK--AGTTEDDLTMKQSEILLIN--------------------DVIQRHMAT---    
 93 RPOC_LEUPS/158  90.8%  30.2%     EWMVMDVVPVIPPDLR---PMVQLEG---GRFATSDLNDLYRRVINRN--------------------NRLKRLLDLN--    
 94 Q83066/153-772  94.1%  30.5%     TNLILTKFPVLPPCCR---PQTPLVD--------DDLSVFLSQIVKLN--------------------NKLKLNY-----    
 95 Q9KWU6/510-112  91.1%  27.3%     EWMILEAVPVLPPDLR---PMVQVDG---GRFATSDLNDLYRRLINRN--------------------NRLKKLLAQ---    
 96 Q9SVY0/339-106  96.4%  32.2%     SMFFLESVLVPPTKFR---PPTTGGD----SVMEHPQTVGLNKVIESN--------------------NILGNACTNK--    
 97 Q9F3X7/244-828  91.1%  28.0%     EWMVMKVIPVIPPELH---TLVPLDG---GRFATSDLNELCRRVIIRN--------------------NRLRRLIEQ---    
 98 RPC1_GIALA/304  98.7%  24.3%     QDVILTHIPVPPSCLR---PSVQSGSG--AGTTEDNLTSHLVRILTIN--------------------DKLKEAMVS---    
 99 O21238/230-831  91.4%  22.4%     EWFFLKRIPVLSPTYR---PLMKLDD---KLFVASDINFLYQNIIERN--------------------NILKELLKRYSL    
100 Q9RVW0/527-114  91.1%  26.4%     SWMILGTVPVMPPDLR---PMVQVDG---GRFATSDLNDLYRRLINRN--------------------NRLKKLMSQ---    
101 AAK39916/209-8  98.4%  38.0%     ENLIFFFIPIPPSIIR---PSIRIDT---YTTNEDDLTIKLASIQNTN--------------------KKLKYELEQ---    
102 Q9PQV5/293-939  92.1%  28.8%     EWMVMTRIPVTPSETR---PIISLDG---GRFTTSDTNNFYRKIIIRN--------------------ERLKQMQATD--    
103 RPO1_VACCV/188  90.1%  22.4%     NLFYTDYFPIPPLIIR---PAISFWID--SIPKETNELTYLLGMIVKN--------------------CNLNADE-----    
104 Q98246/187-789  90.5%  23.4%     NLFYKGYFPIPPLIIR---PAISFWID--SIPKETNELTYLLGMIVKY--------------------SNMNAEE-----    
105 O04206/155-765  94.7%  26.6%     EGYILEYLPVPPNCLS--VPEASDGF---STMSVDPSRIELKDVLKKV--------------------IAIKSSR-----    
106 Q9QBB0/186-787  90.1%  22.8%     NLFYKNFFPVPPLIIR---PAISFWID--SIPKETNELTYLLGMIVKY--------------------CNMNAEE-----    
107 Q9Q8N2/186-787  90.1%  22.4%     NLFYKNFFPVPPLIIR---PAISFWID--SIPKETNELTYLLGMIVKY--------------------CNMNADE-----    
108 AAK43568/143-7  90.1%  22.8%     NLFYKNFFPVPPFIIR---PAISFWID--SIPKETNELTYLLGMIVKY--------------------CNMNADE-----    
109 Q9YW50/209-820  91.4%  18.5%     EAFYTNNILIMVNPAR---PPNHYDN-------KDSHIMTTKLNQLVG--------------------SIIKEKE-----    
110 Q9QTF4/174-755  92.1%  34.6%     LNLIMKRFMVLPSCCR---PPNKVGG----SMVHDDLTLLISYIVKRN--------------------LKLAAAT-----    
111 Q26008/632-193  92.8%  30.4%     LKLYKDMFSVFSLKMKYKFNNNIMDD-------DSDITK--MDFLKYY--------------------TLVYNNK-----    
112 AAK28423/204-7  90.8%  27.9%     NWFCIKILPIVSPKIR---PLIPLSI---GKFATSDLNELYRKIINRN--------------------LRLRNIKLLG--    
113 AAK28421/207-7  90.5%  25.6%     SWCILKNIPVIPPRMR---PLVPLNL---EKFASSDINELYKKIIDRN--------------------LRIYKLIIL---    
114 AAK28425/204-7  90.8%  27.6%     NWFCIKILPIVSPKIR---PLIPLSI---GKFATSDLNELYRKIINRN--------------------LRLKNIKLLG--    
115 Q9J593/186-790  90.1%  21.2%     TLFYRGYFSIPPLLIR---PVISFWID--NVPKDTNELTYLLGVIVKH--------------------CNANADE-----    
116 CAC27032/308-1  89.5%  25.1%     SIFFIDYILVTPSRFRPEKLGTTFNG----FREKNPHNFFYSLILKIN--------------------QQILLLIVSEN-    
117 AAK17076/209-7  89.8%  25.1%     SWMVLKKTPVLPPRMR---PLIALSE---KKFASSDINELYKIVLERN--------------------YKLKKMTTYL--    
118 RPOC_ANASP/242  90.8%  29.2%     EWMVMTVIPVIPPDLR---PMVQLDG---GRFATSDLNDLYRRVINRN--------------------NRLARLQEIL--    
119 Q9EMI5/198-807  90.8%  20.3%     KAFYANNIIIPVLPSR---PPNYFDN---KESHV--MTTKLGQLVGTS--------------------QKSRDE------    
120 RPOC_GUITH/241  90.8%  29.5%     TWMILTVLPVIPPDLR---PMVQLDG---GRFATSDLNDLYRRVLNRN--------------------NRLIRLQEIL--    
121 RPOC_PORPU/247  90.8%  30.2%     SWMVFTVIPVIPPDLR---PMVQLDG---GRFATADLNEFYRRIINRN--------------------NRLSRLKSIL--    
122 RPOC_SYNY3/242  90.8%  28.6%     EWMTLDVIPVIPPDLR---PMVQLDG---GRFATSDLNDLYRRVINRN--------------------NRLARLQEIL--    
123 O19897/243-633  90.8%  27.9%     SWMVLNVIPVISPDLR---PMVQLDG---GRFATSDLNDLYRRVINRN--------------------NRLKRLEEIL--    
124 RPOC_MESVI/280  90.8%  27.6%     EWMVLSILPVLPPELR---PMVQLDG---GRFATSDLNDLYRRVINRN--------------------NRLAKLNNML--    
125 RPOC_CYAPA/246  90.8%  27.3%     EWMILSLIPVIPPDLR---PMVQLDG---GRFATSDLNDLYRRVINRN--------------------NRLLRLQEVF--    
126 Q9TL05/385-847  90.8%  27.0%     EWMVIKALPVLPPDLR---PIVQLEG---GRFATTDLNDLYRRVLNRN--------------------NRFMKLHKMV--    
127 RPOC_ODOSI/461  90.8%  28.9%     AWMILTILPVIPPALR---PMIQLEG---GRFATSDLNELYRRIITRN--------------------NRLLRLLEID--    
128 RPOC_MARPO/262  91.1%  27.5%     EWMVLSLLPVLPPELR---PMIELGE---GELITSDLNELYRRVIYRN--------------------NTLLDFLARSG-    
129 RPOC_PINTH/278  90.8%  28.5%     KWMVLCLLPVLPPEPR---PIVQLGEG--GLITSSDLNELYRRVINRN--------------------NTLTNLLARS--    
130 BAB33195/264-6  91.4%  27.9%     EWMVLCLLPVLPPELR---PIIQIDG---GKLMSSDINELYRRVIYRN--------------------NTLIDLLTTSR-    
131 RPOC_CHLVU/398  89.5%  27.2%     AWMILNNLPVLPPGLR---PITSIGG----LVVASDINSFYRKIIIRN--------------------KRMSPRNNLG--    
132 RPOC_MAIZE/262  91.1%  27.8%     EWMVLCLLPVLPPELR---PIVYRSG---DKVVTSDINELYKRVIRRN--------------------NNLAYLLKRSE-    
133 RPOC_SINAL/270  91.4%  28.2%     EWMVLCLLPVLPPELR---PIIQIEG---GKLMSSDINELYRRVIYRN--------------------NTLTDLLTTSR-    
134 Q9MTM4/262-679  91.1%  27.2%     EWMVLCLLPVLPPELR---PIIQMDG---GKLMSSDINELYRRVIYRN--------------------NILADLLTTSR-    
135 CAC24618/217-5  89.8%  26.5%     SWLLFKYLPVLPPNVR---PIINMKN---NQQISNDLNTLYASIINVN--------------------NKIIKLKES---    
136 RPOC_EUGGR/223  92.1%  28.0%     IWIMIHFLPVLPPDIR---PVVKLQD---GTVIMTDLNFLYIDIIYGN--------------------NKIIKLRKF---    
137 Q9MTD4/224-565  87.5%  20.6%     EWLFLTVLPVIPAGLR---PLVKIKQ---KLFVSSLINNLYKIIILRN--------------------NRLKRWKI----    
138 RPOC_PLAFA/237  89.1%  19.4%     NWIFLDLLPILPAGLR---PYFYINN---STYIISTINENYRLIILKN--------------------NKLKYWLYLRNN    
    consensus/100%                   ..hhh..h.h.s...t................................................................    
    consensus/90%                    p.hhhphh.l.P..hR...P.h.ht........tss.s..h.tll..s......................l.t.......    
    consensus/80%                    phhhhphlPV.P.tlR...P.l.hts....hhspsDls.hhtpllttN....................ppltp.......    
    consensus/70%                    chhllshlPV.PsplR...P.l.hps...sthspsDLsphhtcllppN....................ppLpch.t....    

                      cov    pid  81          .         1         .         .         .         .         :         . 160
  1 RPB1_SCHPO/238 100.0% 100.0%     -------------------GAPAHIVSEY----------EQLLQFHVATYMDNEI--AGQPQALQKSG-------RPLKS    
  2 RPB0_ARATH/236 100.0%  66.0%     -------------------GAPRHIISRF----------TQLLQFHIATYFDNEL--PGQPRATQKSG-------RPIKS    
  3 O59227/211-876  99.7%  55.2%     -------------------GAPQLIIEDL----------WDLLQYHVTTYINNET--SGVPPAKHKSG-------RPLKT    
  4 RPA1_THECE/211 100.0%  55.1%     -------------------GAPQLIIEDL----------WDLLQYHVTTYINNET--SGIPPAKHKSG-------RPLKT    
  5 RPA1_METTH/201  99.7%  53.9%     -------------------GAPQLIVEDL----------WELLQYHVTTYFDNEA--SGVPPARHRSG-------RPLKT    
  6 I38186/246-895 100.0%  70.4%     -------------------GAAAHVIAED----------VKLLQFHVATMVDNEL--PGLPRAMQKSG-------RPLKS    
  7 RPA1_SULAC/205 100.0%  56.9%     -------------------GAPQLIIEDL----------WDLLQYHVATYFDNEI--PGLPPAKHRSG-------RPLRT    
  8 O28391/200-840  99.3%  53.1%     -------------------GAPQQILEDL----------WELLQYHVTTYIDNEV--SGIPPARHRSG-------RPLKT    
  9 RPB1_YEAST/232 100.0%  77.6%     -------------------GAPHHAIEEA----------ESLLQFHVATYMDNDI--AGQPQALQKSG-------RPVKS    
 10 O96446/203-874  99.3%  67.8%     -------------------GAPGHVVRDY----------EQLLQFHIATMIDNDI--SGQPQALQKSG-------RPLKS    
 11 AAK40566/205-8 100.0%  57.5%     -------------------GAPQLIIEDL----------WDLLQYHVATYFDNEI--PGLPPSKHRSG-------RPLRT    
 12 O00820/160-801 100.0%  71.5%     -------------------GAAAHIISQF----------QELLQYHIATFIDNEI--PGFPQATVRSG------SRALKS    
 13 Q9HGZ5/244-892 100.0%  74.9%     -------------------GAPEHVVREF----------ESLLQYHVATYMDNDI--AGQPKAMQKSN-------RPVKA    
 14 RPC1_HUMAN/248  99.7%  46.3%     -------------------GAKTQMIMED----------WDFLQLQCALYINSEL--SGIPLNMAPK--------KWTRG    
 15 AAK00312/167-8 100.0%  68.5%     -------------------GGPTHVVNEF----------WDLLQYHVATMMDNQI--SGLPVAQQKGG-------RPIKG    
 16 Q18566/244-902  99.7%  45.6%     -------------------GAPSKTLFET----------WEHLQIQCALYINSEM--SGLPPDMQPK--------RAMRA    
 17 Q23699/157-806 100.0%  66.8%     -------------------GAASHIISED----------MKMLQYHVATFTDNEL--PGLPKAVQKSG-------RPLKS    
 18 RPA1_METVA/208 100.0%  51.4%     -------------------GAPNLIIEDL----------WDLLQYHINTYFDNEA--PGIPPARHRSG-------RPLRT    
 19 Q25203/160-809 100.0%  66.4%     -------------------GAAAHIIFED----------SKMLQYHCSTLVDNEM--PGLPRAVQKSG-------RPLKS    
 20 RPC1_SCHPO/244  99.3%  44.8%     -------------------GTPISNLMEQ----------WEFMQLSIAMYINSEM--PGLRPSDMPS--------KPIRG    
 21 RPC1_YEAST/254 100.0%  45.2%     -------------------GISINNMMEH----------WDYLQLTVAMYINSDSVNPAMLPGSSNGG----GKVKPIRG    
 22 RPA1_HALHA/277 100.0%  52.5%     -------------------GAPQLIIEDL----------WELLQYHVTTFMDNEI--SGTPPARHRSG-------RPLKT    
 23 O96452/201-827  99.3%  65.8%     -------------------GAPAHIIRDY----------EQLVQFHVATLIDNEI--SGQPQALQKNG-------RPLKA    
 24 Q17085/158-807 100.0%  67.1%     -------------------GAAAHIIHEN----------IRMLQFHVATMVDNDM--PGLQRAMQKSG-------RPVKS    
 25 Q25151/153-802 100.0%  64.5%     -------------------GAAAHILAED----------TKMLQFHVATMIDNEM--PGLPRATQKSG-------RPLKS    
 26 AAK00310/218-8 100.0%  62.8%     -------------------GAPAHRLNEQ----------IHVLQAHIITIMNNDL--PGMPRAHQKSG-------RPIKS    
 27 RPA1_THEAC/207 100.0%  48.7%     -------------------GSPQLIIEDL----------WDLLQFHVTTYFDNQT--PGIPPARHRSG-------RALKT    
 28 Q27095/244-890 100.0%  54.4%     -------------------SSTDTAMKET----------RTLLQYHITTYMINDK--PSIERAVTKSG-------RPLKV    
 29 Q20090/240-885  98.7%  65.5%     -------------------GAAAHVLTDD----------VRLLQFHVATLVDNCI--PGLPTATQKGG-------RPLKS    
 30 O09451/140-784  99.7%  65.6%     -------------------GAVAHAIREQ----------IDLVQYHVATYMNNEL--PGIMPATVRGG------SRAIKS    
 31 AAK00309/141-7  99.7%  65.2%     -------------------GTVAHLLREQ----------LDLVQYHVATYMNNEI--PGVSQATVRGG------SRAIKS    
 32 O04142/158-802 100.0%  69.1%     -------------------GAPAHRLAEQ----------IFLLQFHVATYMNNDL--PGMPRAAQKSG-------RPLKS    
 33 RPB2_TRYBB/242  98.7%  53.3%     -------------------SDVQAAIDRS----------RALLQEHVATYFNNAS--TYYKPTKVNDT-------KKLKS    
 34 Q9YAU1/216-866 100.0%  49.8%     -------------------NAPETLIEEN----------WMVLQEMVAAYIDNEL--PGARRLTHRRK-------RYLKT    
 35 RPC1_TRYBB/256  98.4%  41.4%     --------------------LDATRYTET----------WEMLQMRAARLLDSSL--PGFPPNVRTSD---------LKS    
 36 RPA1_MOUSE/302  99.3%  28.0%     EQKLPCEMT---ELTIDKENDSSVAIDRSFLG---LLPGPSLTDKLYNIWIRLQSHVNIVFDSEMDK-----LMLEKYPG    
 37 4995/358-1067   99.3%  30.4%     EV----------------NPDEKEGLERR----------SRAFELLINAFVQLQHDVNSLIDSNRNPSSGGQSRTVP-PG    
 38 O77375/266-102  99.7%  60.9%     -------------------GAKSHVLQDL----------CSLLQFHITTLFDNDI--PGMPIATTRSK-------KPIKA    
 39 AAK00311/165-8 100.0%  60.2%     -------------------GATPHMIEEC----------VEYIQFKVATLMDNNL--PHMPQSQQRSG-------RPIKA    
 40 AAK00313/133-7 100.0%  63.2%     -------------------GANMTTINEL----------RTNLQYYVATVMDNEI--QGQPTQKHKSG-------KPLKA    
 41 O61119/163-757 100.0%  77.0%     -------------------GAPAHIIAEA----------IQFLQFHVATYVDNEI--PGLPQAQQRSG-------RPLKS    
 42 13310932/218-8  98.7%  52.6%     -------------------SGVKAAVDRS----------RALLQEHVATFFNNAS--TYYKPAKVGDT-------KKLKS    
 43 O17628/351-105  99.7%  29.8%     DT----------------SAQLKELIANRV-------RGKTINAQMHDAYLQLQLRANAIFDQDLNKG-----DRDSIAG    
 44 RPA1_HUMAN/295  99.3%  28.3%     EQKLPEEVA---TPTTDEEKDSLIAIDRSFLS---TLPGQSLIDKLYNIWIRLQSHVNIVFDSEMDK-----LMRDKYPG    
 45 RPA1_DROME/293  98.7%  32.2%     --------------------GGQEKLTEEAKAAYQTLKGETAHEKLYTAWLALQMSVDVLLDVNMSR-----EMKSGE-G    
 46 RPA1_YEAST/353  99.7%  34.2%     -------------------LQKDKVSLEDR---------RVIFSRLMNAFVTIQNDVNAFIDSTKAQG--RTSGKVPIPG    
 47 AAK15346/218-8  98.7%  52.3%     -------------------SGVKAAVDRS----------RALLQEHVATFFNNAS--TFYKPAKVGDT-------KKLKS    
 48 G69698/224-835  90.8%  31.2%     --------------------APSIIVQNE----------KRMLQEAVDALIDNG------RRGRPVTG----PGNRPLKS    
 49 CAC33868/123-8  99.3%  65.5%     -------------------GAPGHIIRDY----------ESLLQYHVATLMDNNI--PGLPQSLQKSG-------RPLKS    
 50 O77165/146-800  98.0%  57.2%     --------------------AAPINIQDT----------LDVLQINVACFFDNSV--PSLEKAKNG--------NRPIKS    
 51 Q9HWC9/235-831  90.8%  30.2%     --------------------APDIIVRNE----------KRMLQEAVDALLDNG------RRGRAITG----SNKRPLKS    
 52 RPOC_AQUPY/366  90.5%  28.9%     --------------------APDIIIRNE----------KRMLQEAVDALIDNG------KRGNPVK-----QNGRPLKS    
 53 12722150/236-8  90.8%  28.9%     --------------------APDIIVRNE----------KRMLQESVDALLDNG------RRGRAITG----SNRRPLKS    
 54 CAC27103/217-8 100.0%  61.2%     -------------------CLPSQLINEQ----------INLLQYHIGSYMNNSV--PSLAKSLQKSG-------RPIKS    
 55 RPOC_BACHD/224  90.8%  31.2%     --------------------APSIIVQNE----------KRMLQEAVDALIDNG------RRGRPVTG----PGNRPLKS    
 56 RPOC_BACAN/224  90.8%  31.5%     --------------------APSIIVQNE----------KRMLQEAVDALIDNG------RRGRPVTG----PGNRPLKS    
 57 RPOC_ECOLI/235  90.8%  30.2%     --------------------APDIIVRNE----------KRMLQEAVDALLDNG------RRGRAITG----SNKRPLKS    
 58 CAC33863/114-7  99.0%  66.4%     -------------------GAPAHVIREY----------EQLLQFHVNTYMDTEI--AGQPQALQKSG-------RPIKS    
 59 RPOC_RICPR/235  91.1%  29.0%     -------------------KAPDIIVRNE----------KRMLQEAVDALFDNG------RRGRAAKN----ANKRPFKS    
 60 Q9KV29/235-831  90.8%  30.5%     --------------------APDIIVRNE----------KRMLQESVDALLDNG------RRGRAITG----SNKRPLKS    
 61 Q9KW13/235-831  90.8%  30.8%     --------------------APDIIVRNE----------KRMLQESVDALLDNG------RRGRAITG----SNKRPLKS    
 62 CAC33864/178-8  98.7%  62.7%     -------------------GAPGHIIRDY----------ESLLQYHVATLMDNNI--AGLPQSLQKSG-------RPLKS    
 63 Q9LVH0/251-907  98.7%  42.7%     ------------------TSSPKNMQV------------WDTVQIEVARYINSEV--RGCQNQPEE---------HPLSG    
 64 RPOC_PSEPU/246  90.8%  28.9%     --------------------APDIIVRNE----------KPMLQEAVEPLLDNG------ACGVAIIG----SNKRPLKS    
 65 O25806/1624-21  90.8%  32.8%     --------------------APEIIVRNE----------KRMLQEAVDVLFDNG------RSTNAVKG----ANKRPLKS    
 66 RPOC_LISMU/224  90.8%  31.2%     --------------------APNIIVQNE----------KRMLQEAVDALIDNG------RRGRPVTG----PGNRPLKS    
 67 RPOC_BORBU/224  90.8%  28.2%     --------------------APEIIVRNE----------KRMLQESVDSLFDNS------HKRKVVKG----SSSRPLKS    
 68 Q9K1J1/237-833  90.8%  28.9%     --------------------APDIIVRNE----------KRMLQEAVDSLLDNG------RRGKAMTG----ANKRPLKS    
 69 AAK22490/237-8  90.8%  30.2%     --------------------APDIIIRNE----------KRMLQESVDALFDNG------RRGRVITG----ANKRPLKS    
 70 RPOC_TREPA/224  90.8%  27.9%     --------------------APDIIIRNE----------KRMLQEAVDALFDNS------KRKPAIKG----ASNRPLKS    
 71 CAC33856/129-7  99.0%  63.2%     -------------------GAPGHIIRDY----------ENLLQYHVATLMDNTI--PGLPQSLQKSG-------RPLKS    
 72 7189607/242-83  90.8%  29.5%     --------------------TPEVIVRNE----------KRMLQEAVDALFDNG------RHGHPVMG----AGNRPLKS    
 73 Q9PA87/258-854  90.8%  30.8%     --------------------APDIIVRNE----------KRMLQESVDALLDNG------RRGRAITG----TNKRPLKS    
 74 BAB41732/224-8  90.8%  30.5%     --------------------APGIIVQNE----------KRMLQEAVDALIDNG------RRGRPVTG----PGNRPLKS    
 75 A45597/244-101  99.3%  32.3%     -----------------TNGYQTNQFLGN----------VEFLQLQITRFINSDSPAVSQLLATQNIS-------KPGRG    
 76 14021284/237-8  90.8%  29.5%     --------------------APGIIVRNE----------KRMLQEAVDALFDNG------RRGRVITG----ANKRPLKS    
 77 RPOC_MYCLE/310  90.8%  28.6%     --------------------APDIIVNNE----------KRMLQESVDALFDNG------RRGRPVTG----PGNRPLKS    
 78 RPOC_THEMA/519  92.8%  29.6%     --------------------APEIILRNE----------KRMLQEAVDALIHNGSDSEGKRSRRAVLK---DRNGRPLKS    
 79 RPOC_CAMJE/257  90.8%  30.5%     --------------------APEIIIRNE----------KRMLQEAVDALFDNG------RRANAVKG----ANKRPLKS    
 80 RPOC_BROTH/224  90.8%  30.8%     --------------------APSIIVQNE----------KRMLQEAVDGLIDNG------RRGRPVTG----PGNRPLKS    
 81 12724824/216-8  90.8%  31.8%     --------------------APNIIVQNE----------KRMLQEAVDTLIDNG------RRGRPITG----AGNRPLKS    
 82 Q26793/371-105  98.0%  30.6%     --------------------TLSANSTNG----------RSFITDAQRAVNESN-----LRNLQQKVD-------EFYAE    
 83 Q9L0K9/310-901  90.8%  28.2%     --------------------APEIIVNNE----------KRMLQEAVDALFDNG------RRGRPVTG----PGNRPLKS    
 84 Q89506/216-991  99.7%  28.5%     EKQKKEIDDFLKKPIKNGLKTKKKINKEEITP----LDQYLKLHDKYVKYVNNLKFRIETYCNNSQGKATHATTGRAIKG    
 85 AAK33217/225-8  90.8%  31.2%     --------------------APGIIVQNE----------KRMLQEAVDALIDNG------RRGRPITG----PGSRPLKS    
 86 RPOC_BUCAI/235  90.8%  29.9%     --------------------APDIIVRNE----------KRMLQEAVDALLDNG------RRGRAITG----SNKRPLKS    
 87 RPOC_MYCGE/297  93.8%  28.8%     --------------------VPSIVVNNE----------KRLLQESVDALFDNS------SRHKPSLS----KDKRSLKS    
 88 T10432/224-835  90.8%  29.9%     --------------------APGIIVQNE----------KRMLQEAVDALIDNG------RRGRPVAG----PGNRPLKS    
 89 RPOC_WEIPA/158  90.8%  30.2%     --------------------APGIIVQNE----------KRMLQEAADALVDNG------RRGRPVTG----PGNRPLKS    
 90 RPOC_OENOE/159  92.1%  31.5%     --------------------APGIIVQNE----------KRMLQEAVDALIDNG------RRGRPVSG----PGNRPLKS    
 91 RPO1_ASFB7/194  98.4%  32.2%     -----------------GQKIPLNIDRN-----------LQTIQQLYYNFLLDSVSTTATQGGTGKRG--IVMGARPAPS    
 92 Q9VXP9/247-780  99.7%  45.9%     -------------------GGKIELIHED----------WDFLQLHVALYFHSEI--SGIPINMAPK--------KTTRG    
 93 RPOC_LEUPS/158  90.8%  30.2%     --------------------APGIIVQNE----------KRMLQEAVDALIDNG------RRGRPVAG----PGNRPLKS    
 94 Q83066/153-772  94.1%  30.5%     --------------------CPQVA---------------DQLRLKILCYVDNS-----KGKATHN------TNHKAMTG    
 95 Q9KWU6/510-112  91.1%  27.3%     -------------------GAPEIIIRNE----------KRMLQEAVDAVIDNG------RRGSPVTN---PGSERPLRS    
 96 Q9SVY0/339-106  96.4%  32.2%     -------------------LDQSKVIFR-----------WRNLQESVNVLFD-S------KTATVQSQ-------RDSSG    
 97 Q9F3X7/244-828  91.1%  28.0%     -------------------RAPQVILRNE----------KRMLQEAVDSFFDNS------SKAGAVKS----DSNRPLKS    
 98 RPC1_GIALA/304  98.7%  24.3%     -------------------GAVATSKVYAK---------WDQLNMDVSLLYIG-----KIPGGVQPVKNKTDSGTKEGTG    
 99 O21238/230-831  91.4%  22.4%     EKIDR--------ISSLFTEIIDEVKKDNPI-----IKGKINLQKAVTTLMD-----SSFIKGIIT---------FKNKS    
100 Q9RVW0/527-114  91.1%  26.4%     -------------------GAPDMIIRNE----------KRMLQEAVDALIDNG------RRGSPVTN---PGSDRSLRS    
101 AAK39916/209-8  98.4%  38.0%     -------------------NMNYNRIKEL----------WTFLQIECYQYFD-----SDFFQKKFNLK---------FQG    
102 Q9PQV5/293-939  92.1%  28.8%     --------------------APEILLDNE----------KRLLQEAVDSLFDNN------SRKKPVVG----KDKRPLKS    
103 RPO1_VACCV/188  90.1%  22.4%     ----------------------------------------QVIQKAVIEYDD------IKIISNNTSS----------IN    
104 Q98246/187-789  90.5%  23.4%     ----------------------------------------QVLQKAVIEYDN------IKIIVNNN---------TSSIN    
105 O04206/155-765  94.7%  26.6%     ---------------SGETNFESHKAEA------------SEMFRVVDTYLQVRGTAKAARNIDMRYG---------VSK    
106 Q9QBB0/186-787  90.1%  22.8%     ----------------------------------------QVIQKAVIEYDD------IKIISNN----------TTSIN    
107 Q9Q8N2/186-787  90.1%  22.4%     ----------------------------------------QVIQKAVIEYDD------IKIISNN----------TTSIN    
108 AAK43568/143-7  90.1%  22.8%     ----------------------------------------QVIQKAIIEYDD------IKIISNN----------TTSIN    
109 Q9YW50/209-820  91.4%  18.5%     ---------------------------------------IEDIQKIYNDIDHVK------PKSPYSRG-------TLFDT    
110 Q9QTF4/174-755  92.1%  34.6%     --------------------SPEQRILYY-----------QALKGDILCYMDNS-----KGRAVHVTS------NKSLMG    
111 Q26008/632-193  92.8%  30.4%     -------------------SAYINIL-------------FSTLQLGVNTFYDSTL--TEKVNNKHLKN----------IS    
112 AAK28423/204-7  90.8%  27.9%     --------------------IPKQILINE----------RILLQESINALFDNE------KIENPILT----SSKRILKS    
113 AAK28421/207-7  90.5%  25.6%     -------------------GIPKQILINE----------RILLQEAVNALYDNE------KIKNPILS----SNKRILKS    
114 AAK28425/204-7  90.8%  27.6%     --------------------IPKQLLINE----------RILLQESINALFDNE------KIENPILT----SSKRILKS    
115 Q9J593/186-790  90.1%  21.2%     ----------------------------------------PTIQKAIIEYDN-----IKLISTNSTTN-----------N    
116 CAC27032/308-1  89.5%  25.1%     ------------------HKFNSKFMDKT----------ITQLENIIENFFI------GTIQLKKKK--------IPN-S    
117 AAK17076/209-7  89.8%  25.1%     --------------------DPKQLLINE----------RISLQESIYALFDNE------KLINPILT----SSKRVLKS    
118 RPOC_ANASP/242  90.8%  29.2%     --------------------APEIIVRNE----------KRMLQEAVDALIDNG------RRGRTVVG----ANNRPLKS    
119 Q9EMI5/198-807  90.8%  20.3%     ----------------------------------------SEVQKIYNDIDNVK------PNSPYKTS-------NMLVT    
120 RPOC_GUITH/241  90.8%  29.5%     --------------------APEIIIRNE----------KRMLQESVDALIDNG------RRGRTVMG----ANNRPLKS    
121 RPOC_PORPU/247  90.8%  30.2%     --------------------APEIIIRNE----------KRMLQEAVDSLMDNG------RRGRTVVG----ANNRPLKS    
122 RPOC_SYNY3/242  90.8%  28.6%     --------------------APEIIVRNE----------KRMLQEAVDALIDNG------RRGRTVVG----ANNRALKS    
123 O19897/243-633  90.8%  27.9%     --------------------APEIIIRNE----------KRMLQEAVDALIDNG------RRGRVVVG----ANNRALKS    
124 RPOC_MESVI/280  90.8%  27.6%     --------------------APEIVVRSE----------KRMLQESVDALIDNG------KRGKALVG----NNKIPLKS    
125 RPOC_CYAPA/246  90.8%  27.3%     --------------------APEIVVRNE----------KRILQEAVDALIDNG------RRGRIVVG----AKNRPLKS    
126 Q9TL05/385-847  90.8%  27.0%     --------------------APETLIRSE----------KRLLQEAVDGLFDNG------KRGKPVLN----SSNRPLKS    
127 RPOC_ODOSI/461  90.8%  28.9%     --------------------APQLIIRNE----------KRMLQEAVDTLIDNG------KRGKIALS----ANNRPLKS    
128 RPOC_MARPO/262  91.1%  27.5%     -------------------STPGGLVVCQ----------KRLVQEAVDALIDNG------IRGQPMKD----SHNRPYKS    
129 RPOC_PINTH/278  90.8%  28.5%     -------------------GSESFVIYQT-----------KLIQEAVDALLDNG------ICRQPMRD----SHNRPYKS    
130 BAB33195/264-6  91.4%  27.9%     -------------------STPGELVMCQ----------EKLVQEAVDTLLD-----NGIRGQPMKDG-----HNKVYKS    
131 RPOC_CHLVU/398  89.5%  27.2%     --------------------IFDTTLGGSWL---SWCYNLRQVQEAVDELLR-------TGSVDA--G-------RPLKS    
132 RPOC_MAIZE/262  91.1%  27.8%     -------------------LAPADLVMCQ----------EKLVQEAVDTLLDSG------SRGQPTRD----GHNKVYKS    
133 RPOC_SINAL/270  91.4%  28.2%     -------------------STPGELVMCQ----------EKLVQEAVDTLLD-----NGIRGQPMRDG-----HNKVYKS    
134 Q9MTM4/262-679  91.1%  27.2%     -------------------STPGDLVMGQ----------EKLVQEAVDTLLDNG------IRSRPVRD----GQNKVYKS    
135 CAC24618/217-5  89.8%  26.5%     -------------------LIPDNYFINE----------KILLQKKVDQLINNE------KYKENKLG--KIINNKKLKS    
136 RPOC_EUGGR/223  92.1%  28.0%     -------------------LLPEEFMLNE----------KRSLQVKVDAFINNEN--ISENPYEQND--------KKLKS    
137 Q9MTD4/224-565  87.5%  20.6%     --------------------LRHSIPFFF------ELIDKQLLQCSIDDLLN--------IKTKPSSS----------NC    
138 RPOC_PLAFA/237  89.1%  19.4%     IF-----------------FIFEIIE-------------KRLLQQLIDYLLI-----NKLILKNNN----------TFFN    
    consensus/100%                   .................................................h..............................    
    consensus/90%                    ........................................thlQ..htthhp..........t............p.h.s    
    consensus/80%                    ....................sst.hl.p............phlQ.tlsshhsst........s....s.......+sh+u    
    consensus/70%                    ....................ssthllppt..........hphLQ.tVsshhDNt.......pup.hts.......+slKo    

                      cov    pid 161          .         .         .         2         .         .         .         . 240
  1 RPB1_SCHPO/238 100.0% 100.0%     IRARLKGKE--GRLRGNLMGKRVDFSARTVITGD-PNLSLDELGVPRSIAKTLTYPETVTPYNIYQLQELVRNG------    
  2 RPB0_ARATH/236 100.0%  66.0%     ICSRLKAKE--GRIRGNLMGKRVDFSARTVITPD-PTINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYG------    
  3 O59227/211-876  99.7%  55.2%     LAQRLKGKE--GRFRGNLSGKRVNFSARTVISPD-PMISINEVGVPIQIAMELTVPEKVTEFNIEKLRKMVLNG------    
  4 RPA1_THECE/211 100.0%  55.1%     LSQRLKGKE--GRFRGNLSGKRVNFSARTVISPD-PMISINEVGVPMAIAMELTVPEKVTEFNFEKLRKMVLNG------    
  5 RPA1_METTH/201  99.7%  53.9%     LAQRLKGKE--GRFRSNLSGKRVNFSARTVISPD-PNISINEVGVPEIIAREVTVPVYVTEWNIDRMREYIENG------    
  6 I38186/246-895 100.0%  70.4%     LKQRLKGKE--GRVRGNLMGKRVDFSARTVITPD-PNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRG------    
  7 RPA1_SULAC/205 100.0%  56.9%     LAQRLKGKE--GRFRGNLSGKRVDFSARTVISPD-PNLSIDEVGIPYTIARMLTVPERVTNINIERIRQYIING------    
  8 O28391/200-840  99.3%  53.1%     LAQRLKGKE--GRFRGSLSGKRVNFSARTVISPD-PCLSINEVGVPREIAEELTVPIYVTPQNIDMAREFVLRS------    
  9 RPB1_YEAST/232 100.0%  77.6%     IRARLKGKE--GRIRGNLMGKRVDFSARTVISGD-PNLELDQVGVPKSIAKTLTYPEVVTPYNIDRLTQLVRNG------    
 10 O96446/203-874  99.3%  67.8%     ISARLKGKE--GRVRGNLMGKRVDFSARSVITPD-PNISVEEVGVPSEIAKIHTFPEIITPFNIDRLTKLVSNG------    
 11 AAK40566/205-8 100.0%  57.5%     LAQRLKGKE--GRFRGNLSGKRVDFSSRTVISPD-PNISIDEVGVPEIIAKTLTVPERITPWNIEKLRQFVING------    
 12 O00820/160-801 100.0%  71.5%     LKQRLRGKE--GRIRGNLMGKRVDFSARTVITGD-PNISIDEVGVPRSIALNLTYPELVTPFNIDKMYELIRNG------    
 13 Q9HGZ5/244-892 100.0%  74.9%     IRSRLKGKE--GRLRQNLMGKRVDFSARTVITGD-PNLSLDEVGVPKSIARTLTYPEVVTPYNIDKLQQLVSNG------    
 14 RPC1_HUMAN/248  99.7%  46.3%     FVQRLKGKQ--GRFRGNLSGKRVDFSGRTVISPD-PNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVQNG------    
 15 AAK00312/167-8 100.0%  68.5%     IRQRLKGKE--GRLRGNLMGKRVDFSARTVITGD-PNISIDEVGVPRSICRNLTFPEIVNDYNRDHLQKLVANG------    
 16 Q18566/244-902  99.7%  45.6%     FTQRLKGKQ--GRFRGNLCGKRVDFSGRTVISPD-PNLRIDQVGVPIHVAMTLTFPEIVNASNIEKMRQLVING------    
 17 Q23699/157-806 100.0%  66.8%     VKQRLKGKE--GRVRGNLMGKRVDFSARTVITPD-PNLRIDQVGVPRSIAQNMTFPELVTPFNIDRMQELVRRG------    
 18 RPA1_METVA/208 100.0%  51.4%     LAQRLKGKE--GRFRHNLAGKRVNFSARTVISPD-PRLSINEVGIPELIAKELTVPEKVTPYNIERIRKLIENG------    
 19 Q25203/160-809 100.0%  66.4%     VKQRLKGKE--GRVRGNLMDKRVDFSGRTVITPD-PNLRVDQVGVPRSIAHNLTFPELVTPFNIDVMQERVRRG------    
 20 RPC1_SCHPO/244  99.3%  44.8%     FCQRLKGKQ--GRFRGNLSGKRVDFSGRTVISPD-PNLRIDQVAVPYRIAKILTFPERVTTQNKKHLQDCIRNG------    
 21 RPC1_YEAST/254 100.0%  45.2%     FCQRLKGKQ--GRFRGNLSGKRVDFSGRTVISPD-PNLSIDEVAVPDRVAKVLTYPEKVTRYNRHKLQELIVNG------    
 22 RPA1_HALHA/277 100.0%  52.5%     LSQRLKGKE--GRFRGSLSGKRVNFSARTVISPD-PTLSLNEVGVPDRVATEMTQTMVVNEQNLERARRYVRNG------    
 23 O96452/201-827  99.3%  65.8%     ISARLKGKE--GRLRGNLMGKRVDFSARSVITAD-PNISLEELGVPMKVAMIHTFPERVTSFNLNKLRKLVSNG------    
 24 Q17085/158-807 100.0%  67.1%     IKSRLKGKE--GRIRGNLMGKRVDFSARTVITPD-PNLRIDQVGVPRSIAQNLTFPEMVTPLNHAKLTELVQRG------    
 25 Q25151/153-802 100.0%  64.5%     IKQRLKGKE--GRIRGNLMGKRVDFSARTVITPD-PMLRIDQVGVPRSIAQNLTFPEIVTPFNIERLTELVKRG------    
 26 AAK00310/218-8 100.0%  62.8%     ISQRLKGKE--GRVRGNLMGKRVDFSGRTVISPD-PNLRLDQVGVPQTIAMNLTYPEVVTPFNVEKMRRLVMNG------    
 27 RPA1_THEAC/207 100.0%  48.7%     LVQRLKGKE--GRFRSNLSGKRVSFSSRTVISPE-PYLSVNEVGVPERAARELTVPVIVNQFNIDEMRELIKRGRNPRDQ    
 28 Q27095/244-890 100.0%  54.4%     ISQRLKGKE--GHLRGHLSGKRDDYSARSVISPD-TSISIDQVGVPEQLAKILTFPEVVTPTNQKWLESIVMKG------    
 29 Q20090/240-885  98.7%  65.5%     IKQRLKGKE--GRIRGNLMGKRVDFSARTVITAD-PNLPIDTVGVPRTIAQNLTFPEIVTPFNVDKLQELVNRG------    
 30 O09451/140-784  99.7%  65.6%     IGQRFKGKE--GRVRGNLMGKRVDFSARTVITPD-PNLRLHEVGVPFSIARNLTYPEIVTSYNIDEMQKLVENG------    
 31 AAK00309/141-7  99.7%  65.2%     IGQRFKGKE--GRVRGNLMGKRVDFSARTVITPD-PNLLLHEVGVPYSIAKNLTFPETVTSYNYAEMRKLVENG------    
 32 O04142/158-802 100.0%  69.1%     ISQRLKGKE--GRLRGNLMGKRVDFSARTVITPD-PNLRLDQVGVPFSIAKNLTFPETVTAYNIEEMQQLVENG------    
 33 RPB2_TRYBB/242  98.7%  53.3%     LTERLKGKY--GRLRGNLMGKRVDFSARTVITGD-PNIDVDEVGVPFSVAMTLTFPERVNTVNKKRLTEFAR--------    
 34 Q9YAU1/216-866 100.0%  49.8%     LAQRLKGKD--GRIRGNLSGKRVNYSARTVISPD-PYISINEVGVPEEIAKTLTIAMRVTPYNLEEARRYVLNG------    
 35 RPC1_TRYBB/256  98.4%  41.4%     YAQRLKSKH--GRFRCNLSGKRVDYSGRSVISPD-PNLDVDELAVPLHVARVLTYPQRVFKANHELMRRLVRNG------    
 36 RPA1_MOUSE/302  99.3%  28.0%     IRQILEKKE--GLFRKHMMGKRVDYAARSVICPD-MYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVING------    
 37 4995/358-1067   99.3%  30.4%     IKQILEKKE--GLFRKHMMGKRVNYAARSVISPD-PNIETNEIGVPPVFATKLTYPEPVTLYNFNEMRNAVING------    
 38 O77375/266-102  99.7%  60.9%     IRTRLKGKE--GRLRGNLMGKRVDFSARTVITGD-PNLNIDYIGVPKSVAMTLTFCETVTPLNYDNLKKLVERG------    
 39 AAK00311/165-8 100.0%  60.2%     ISQRLKGKE--GRVRGNLMGKRVDFSARTVITPD-PNLAIDQVGVPRTVAAKLTVPERVTNFNLNKMNQYVANG------    
 40 AAK00313/133-7 100.0%  63.2%     IRARLRGKE--GRLRGNLMGKRVDFSARTVITPD-PNLQLDQLGVPQQIALNLTVPETVTNENIDEMRKLIERG------    
 41 O61119/163-757 100.0%  77.0%     IRQRLKGKE--GRIRGNLMGKRVDFSARTVITAD-PNLSIDQVGVPRSIALNLTYPETVTPFNIDKMRELIRNG------    
 42 13310932/218-8  98.7%  52.6%     LTERLKGKY--GRLRGNLMGSRVDFSARTVITGD-PNIDVDEVGVPFSVAMTLTFPERVNVINKKRLTEFVQ--------    
 43 O17628/351-105  99.7%  29.8%     IKQILEKKQ--GLFRMHMMGKRVNFACRSVITPD-PYLDIDEIGIPDIFAKKLTFTEPVNAFNVNEMKGLLRQG------    
 44 RPA1_HUMAN/295  99.3%  28.3%     IRQILEKKE--GLFRKHMMGKRVDSTARSVICPD-MYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVING------    
 45 RPA1_DROME/293  98.7%  32.2%     LKQIIEKKC--GLIRSHMMGKRVNYAARTVITPAYPNINVDEIGIPDIFAKKLSYPVPVTEWNVTDVRKMVMNG------    
 46 RPA1_YEAST/353  99.7%  34.2%     VKQALEKKE--GLFRKHMMGKRVNYAARSVISPD-PNIETNEIGVPPVFAVKLTYPEPVTAYNIAELRQAVING------    
 47 AAK15346/218-8  98.7%  52.3%     LTERLKGKY--GRLRGNLMGKRVDFSARTVITGD-PNIDVDEVGVPFSIAMTLTFPERVNVINKKRLTEFVQRS------    
 48 G69698/224-835  90.8%  31.2%     LSHMLKGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PHLKMYQCGLPKEMALELFKPFVMKELVEKGL-------------    
 49 CAC33868/123-8  99.3%  65.5%     LSARLKGKE--GRVRGNLMGKRVDSSARSVISPD-SNISLCEVGVPEQIARIHTFPEHVTAFNKARLEALVRNG------    
 50 O77165/146-800  98.0%  57.2%     LSERLRGKE--GRVRGQLMGKRVDFSARSVITPD-PTLALNELGVPRTVASNLTVPEMVSPLNIHRLAALVRNG------    
 51 Q9HWC9/235-831  90.8%  30.2%     LADMIKGKQ--GRFRQNLLGKRVDYSGRSVITVG-PTLRLHQCGLPKKMALELFKPFIFGKLEGRGM-------------    
 52 RPOC_AQUPY/366  90.5%  28.9%     LADYLKGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PELQMHQCGLPKIMALELFKPFVYRRLEEKGY-------------    
 53 12722150/236-8  90.8%  28.9%     LADMIKGKQ--GRFRQNLLGKRVDYSGRSVITVG-PYLHLHQCGLPKKMALELFRPFIYAKLESRGF-------------    
 54 CAC27103/217-8 100.0%  61.2%     IKQRLQGKE--GRLRGNLMGKRVDFSARTVITPD-PNIKLDELGVPLSIAMNLTFPEIVTSFNIEYMKFLLYNG------    
 55 RPOC_BACHD/224  90.8%  31.2%     LSHMLKGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PNLKMYQCGLPKEMALELFKPFVMKELVSKGL-------------    
 56 RPOC_BACAN/224  90.8%  31.5%     LSHMLKGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PNLKMYQCGLPKEMALELFKPFVMKELVEKGL-------------    
 57 RPOC_ECOLI/235  90.8%  30.2%     LADMIKGKQ--GRFRQNLLGKRVDYSGRSVITVG-PYLRLHQCGLPKKMALELFKPFIYGKLELRGL-------------    
 58 CAC33863/114-7  99.0%  66.4%     ISSRIKGKE--GRIRGNLMGKRVDFSARSVITAE-PNIDLDELGVPREIAVIETFPEKVNSYNIIRLSELVKRG------    
 59 RPOC_RICPR/235  91.1%  29.0%     LSDMLKGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PELKLHQCGLPKKMALELFKPFIYSKLELYGI-------------    
 60 Q9KV29/235-831  90.8%  30.5%     LADMIKGKQ--GRFRQNLLGKRVDYSGRSVITVG-PYLRLHQCGLPKKMALELFKPFIYSKLETRGL-------------    
 61 Q9KW13/235-831  90.8%  30.8%     LADMIKGKQ--GRFRQNLLGKRVDYSGRSVITVG-PTLRLHQCGLPKKMALELFKPFIYGKLEGRGL-------------    
 62 CAC33864/178-8  98.7%  62.7%     ISARLKGKE--GRVRGNLMGKRVDFSARSVISPD-SNISLVEVGVPEAIAKIHTFPERVTGFNKERLERMVRNG------    
 63 Q9LVH0/251-907  98.7%  42.7%     ILQRLKGKG--GRFRANLSGKRVEFTGRTVISPD-PNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNG------    
 64 RPOC_PSEPU/246  90.8%  28.9%     LADMIKGKQ--GLFRQNLLGKRVDYSGRSVISVG-PTLRLHQCGLPKKMALELFKPFIFGKLEMRGL-------------    
 65 O25806/1624-21  90.8%  32.8%     LSEIIKGKQ--GRFRQNLLGKRVDFSGRSVIVVG-PNLKMDECGLPKNMALELFKPHLLSKLEERGY-------------    
 66 RPOC_LISMU/224  90.8%  31.2%     LSHMLKGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PNLKMYQCGLPKEMALELFKPFIMKELVSRGL-------------    
 67 RPOC_BORBU/224  90.8%  28.2%     LSDALKGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PELKLHQCGLPAKMALELFKPFVIRRLIESEA-------------    
 68 Q9K1J1/237-833  90.8%  28.9%     LADMIKGKG--GRFRQNLLGKRVDYSGRSVITVG-PYLRLHQCGLPKKMALELFKPFIFHKLEKQGL-------------    
 69 AAK22490/237-8  90.8%  30.2%     LADMLKGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PELKLHECGLPKKMALELFKPFIYARLDAKGL-------------    
 70 RPOC_TREPA/224  90.8%  27.9%     ISDMLKGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PELKLWQCGLPTKMALELFKPFIMKKLVEKEI-------------    
 71 CAC33856/129-7  99.0%  63.2%     ISARLKGKE--GRIRGNLMGKRVDFSARSVISPD-SNLSLDEVGVPLQIAKIHTFPEKVTSFNLEKLQKLIDNG------    
 72 7189607/242-83  90.8%  29.5%     LSEMLKGKN--GRFRQNLLGKRVDYSGRSVIIVG-PELKFNQCGLPKEMALELFEPFIIKRLKDQGS-------------    
 73 Q9PA87/258-854  90.8%  30.8%     LADMIKGKQ--GRFRQNLLGKRVDYSARSVIIVG-PNLRLHQCGLPKKMALELFKPFVFAKLQRRGL-------------    
 74 BAB41732/224-8  90.8%  30.5%     LSHMLKGKQ--GRFRQNLLGKRVDYSGRSVIAVG-PSLKMYQCGLPKEMALELFKPFVMKELVQREI-------------    
 75 A45597/244-101  99.3%  32.3%     ICQRLKGKE--GRFRCNLSGKRVDFSSRTVISPD-PNISIDEVVIPKIIAMRLTYPETVNKYNIDKLKMLIKNG------    
 76 14021284/237-8  90.8%  29.5%     LSDMLKGKQ--GRFRQNLLGKRVDYSGRSVIVTG-PELKLHQCGLPKKMALELFKPFIYARLDAKGY-------------    
 77 RPOC_MYCLE/310  90.8%  28.6%     LSDLLKGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PQLKLHQCGLPKLMALELFKPFVMKRLVDLNH-------------    
 78 RPOC_THEMA/519  92.8%  29.6%     LTDLLKGKK--GRFRRNLLGKRVDYSGRAVIVVG-PNLKIHQCGIPKKMAMELFKPFVLAKLLGEGSSS-----------    
 79 RPOC_CAMJE/257  90.8%  30.5%     LSEIIKGKQ--GRFRQNLLGKRVDFSGRSVIVVG-PKLRMDQCGLPKKMALELFKPHLLAKLEEKGY-------------    
 80 RPOC_BROTH/224  90.8%  30.8%     LSHMLKGKQ--GRFRQNLLGKRVDYSGRSVIVCG-PSLKMYQCGLPREMAIELFKPFVMRELTQRGL-------------    
 81 12724824/216-8  90.8%  31.8%     LSHMLKGKQ--GRFRQNLLGKRVDYSGRSVIAVG-PTLKMYQCGVPREMAIELFKPFVMAQLVKKEL-------------    
 82 Q26793/371-105  98.0%  30.6%     IVNSFAKKE--GLFRMNMMGKRVNQACRSVISPD-PFVEPNEVLLPRPLARALSFPEQVTCFAPARMNLLKHCVVNG---    
 83 Q9L0K9/310-901  90.8%  28.2%     LSDMLKGKQ--GRFRQNLLGKRVDYSARSVIVVG-PQLKLHQCGLPKAMALELFKPFVMKRLVDLNH-------------    
 84 Q89506/216-991  99.7%  28.5%     LRERLTGKE--GQIRNNLLGKRCEMSARTVIGPD-PTLKIDEVIVPKEIAQSLTFPDFVNKHNIDRLTKLVNSGNAI-RL    
 85 AAK33217/225-8  90.8%  31.2%     LSHMLKGKQ--GRFRQNLLGKRVDFSGRSVIAVG-PTLKMYQCGVPREMAIELFKPFVMREIVAKEY-------------    
 86 RPOC_BUCAI/235  90.8%  29.9%     LADMIKGKQ--GRFRQNLLGKRVDYSGRSVITVG-PYLHLHQCGLPKKMALELFKPFIYGKLEVRGL-------------    
 87 RPOC_MYCGE/297  93.8%  28.8%     LTDRLKGKQ--GLFRHNLLGKRVDYSGRSVIVVG-PELKMYEVGIPALMILKLFKPFIIHGLINKFD----ENG------    
 88 T10432/224-835  90.8%  29.9%     LSHMLKGKQ--EGFRQNLLGKRVDYSGRSVIDVG-PSLKMNQMGLPVPMAMELFKPFIMKELVSRNL-------------    
 89 RPOC_WEIPA/158  90.8%  30.2%     LSHMLKGKQ--GRFRQNLLGKRVDYSGRSVIDVG-PFLKMNQMGLPRQMAMELFRPFIMKELVKRDL-------------    
 90 RPOC_OENOE/159  92.1%  31.5%     LSHLLKGKQ--GRFRQNLLGKRVDYSGRSVIDVG-PFLKMNQMGLPRQMAVELFKPFIYNRLIELGT----ENG------    
 91 RPO1_ASFB7/194  98.4%  32.2%     IMRRLPRKE--GRIRKSLLGSQVWSISRSTICGN-SDLHLDEVGYPISFARTLQVAETVQHYNINRLMPYFLNG------    
 92 Q9VXP9/247-780  99.7%  45.9%     IVQRLKGKQ--GRFRCNLSGKRVDFSGRTVISPD-PNLMINQVGVPVRVAKILTYPERVNPANIRHMRELVRNG------    
 93 RPOC_LEUPS/158  90.8%  30.2%     LSHMLKGKQ--GRFRQNLLGKRVDYSGRSVIDVG-PFLKMNQMGLPVPMAIELFRPFIMKELTTRKL-------------    
 94 Q83066/153-772  94.1%  30.5%     IKERLSKKT--GILRQNMMGKRRNQTARSVVGPD-TTLKLDEVAIPYEIANNLTIPIKITPFNYKLISSYKIAAVIKANG    
 95 Q9KWU6/510-112  91.1%  27.3%     LTDILSGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PQLKLHQCGLPKRMALELFKPFLLKKMEEKAF-------------    
 96 Q9SVY0/339-106  96.4%  32.2%     ICQLLEKKE--GLFRQKMMGKRVNHACRSVISPD-PYIAVNDIGIPPCFALKLTYPERVTPWNVEKLREAIING------    
 97 Q9F3X7/244-828  91.1%  28.0%     LTDSLKGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PEPKMHECGLPKYMAAELYKPFVIRKLLERGI-------------    
 98 RPC1_GIALA/304  98.7%  24.3%     IIDRLKGKA--GRFRSNLSGKRVNFSGRTVISPN-PYLSMQQVAIPRLIAQNLTFPEIVTSRNIRFLRELILNG------    
 99 O21238/230-831  91.4%  22.4%     LIKRLSGKK--GRFRKDILGKRINFSGRTVITSG-PRLHLNQCGLPIELVLELFKPFIILKMRDLNICS-----------    
100 Q9RVW0/527-114  91.1%  26.4%     LTDLLGGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PQLKLHQCGVPKRMALELFKPFLFKVLEEKGE-------------    
101 AAK39916/209-8  98.4%  38.0%     VFQRLKGKN--GRFRGTLIGKRVDFSARTVISPD-PNLFLSQIGIPIIICKNLSFPEKLNFYNYERLKRCILRG------    
102 Q9PQV5/293-939  92.1%  28.8%     LSNHLKGKQ--GLFRQNLLGKRVDYSGRSVIVVG-PELKMYEVGIPALMILKLFRPYIISELIRKRD-------------    
103 RPO1_VACCV/188  90.1%  22.4%     LSYITSGKN--NMIRSYIVARRKDQTARSVIGPS-TSITVNEVGMPAYIRNTLTEKIFVNAFTVDKVKQLLASNQ-----    
104 Q98246/187-789  90.5%  23.4%     LSYITSGKN--NMIRSYMVARRKDQTARSVLGPD-PELSITEVGIPDYVRNTLTEKVFVNAFTVPAVEELFRRNE-----    
105 O04206/155-765  94.7%  26.6%     ISDSSSSKAWTEKMRTLFIRKGSGFSSRSVITGD-AYRHVNEVGIPIEIAQRITFEERVSVHNRGYLQKLVDDK------    
106 Q9QBB0/186-787  90.1%  22.8%     LSYITSGKN--NMIRSYIVARRKDQTARSVIGPD-TSLTINEVGVPEYIRNTLTEKIFVNPFTVKYVKKMFTNNE-----    
107 Q9Q8N2/186-787  90.1%  22.4%     LSYITSGKN--NMIRSYIVARRKDQTARSVIGPD-TFITINEVGVPAYIRNTLTEKIFVNPFTLKTVQKLFTDNH-----    
108 AAK43568/143-7  90.1%  22.8%     LSYITSGKN--NMIRSYIVARRKDHNARSVIGPD-ITLTINEVGVPFYIRNTLTEKIFVNPFTTDEVQRLFTNNE-----    
109 Q9YW50/209-820  91.4%  18.5%     LNTEVAGNKKEGILRSYILARRSDNTGRGVAGPI-IA-KIGYLGIPEIVASTLTESIYYNRFTEQKVRDLIYNS------    
110 Q9QTF4/174-755  92.1%  34.6%     IKECISKKG--GLLRQNLMGKRRNYTARSVVGPE-STLALDQVGVPPQVADTLTIEEPVTKYNIEHVRRMRATGH-----    
111 Q26008/632-193  92.8%  30.4%     IRQILDKKE--GILRKNIMGKRVNNCARTVISPD-TFIETNQIGMPIEFAKVLTIDEYITQNNFTYIKKLIENG------    
112 AAK28423/204-7  90.8%  27.9%     FSSSIKGKY--GRFRQNLLGKRVDFSARSVISVD-PNLFLYQCSIPIIIALELFKPFIYFELKKKKL-------------    
113 AAK28421/207-7  90.5%  25.6%     LSSSIKGKY--GRFRQNLLGKRVDFSGRSVIVVD-PSLLIYQCKIPILICLELFKPFLFYELKKKNL-------------    
114 AAK28425/204-7  90.8%  27.6%     FSNSIKGKY--GRFRQNLLGKRVDFSARSVISVN-PNLFLYQCSIPILIALELFKPFIYFELKKKKL-------------    
115 Q9J593/186-790  90.1%  21.2%     LSYITSGKT--NMLRSFVVARRKDQTARSVLGPD-SSLDITEVGIPDYVRNTLTEKIFINAFTIDKVKDMFQRGE-----    
116 CAC27032/308-1  89.5%  25.1%     IKNQLEKKS--GLIRMNIMGKRVLNSARSVIAPD-PFLKTFEVGVPKEFAKDLYVPESINLINILKV-------------    
117 AAK17076/209-7  89.8%  25.1%     FSSLIKGKY--GRFRQNLLGKRVDFSGRSVITVE-PNLFLYECKIPIYIALELFKPILYYELKKKKI-------------    
118 RPOC_ANASP/242  90.8%  29.2%     LSDIIEGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PKLKIHQCGLPREMAIELFQPFVINRLIRSGM-------------    
119 Q9EMI5/198-807  90.8%  20.3%     LNIQVGGNKKGSIVRSNIMARRADNTARCVAGPT-MD-KIGYIYIPKIVAKTLTSSIYYNRFTENMIKDMLVNDN-----    
120 RPOC_GUITH/241  90.8%  29.5%     LSDIIEGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PQLELNQCGLPREMALELFQPFVIHKLIQQGL-------------    
121 RPOC_PORPU/247  90.8%  30.2%     LSDIIEGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PHLKLHQCGLPREMALELFQPFVIHRLILQGL-------------    
122 RPOC_SYNY3/242  90.8%  28.6%     LSDIIEGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PNLKIYQCGLPREMAIELFQPFVIHRLIKLGI-------------    
123 O19897/243-633  90.8%  27.9%     LSNIIEGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PDLKLNECGIPKEMAIELFQPFLIHQIIKEGL-------------    
124 RPOC_MESVI/280  90.8%  27.6%     LSDIIKGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PNLKLHQCGLPKEMAIELFQPFVIHTLINEGL-------------    
125 RPOC_CYAPA/246  90.8%  27.3%     LSDIIEGKQ--GRFRQNLLGKRVDYSGRSVIVVG-LQLKLYQCGLPWEMAIELFQPFVIHRLIHQGL-------------    
126 Q9TL05/385-847  90.8%  27.0%     LADALKGKQ--GRFRQNLLGKRVDYSGRSVIVVG-PKLRLHQCGLPKEMALELFQPLVIRLLLKRKV-------------    
127 RPOC_ODOSI/461  90.8%  28.9%     LSDIIKGKH--GRFRQNLLGKRVDYSGRSVIVVG-PSLRLNECGLPYEMALELFQPFLIREMINQGL-------------    
128 RPOC_MARPO/262  91.1%  27.5%     FSDLIEGKE--GRFRENLLGKRVDYSGRSVIVVG-PFLPLHQCGLPREMAIELFQAFVIRGLIGRNF-------------    
129 RPOC_PINTH/278  90.8%  28.5%     FSDVIEGKE--GRFRENLLGKRVDYSGRSVIVVG-PFLSLYQCGLPSEIAIELFQAFLIRSLIGRHI-------------    
130 BAB33195/264-6  91.4%  27.9%     FSDIIEGKE--GRFRETLLGKRVDYSGRSVIVVG-PSLSLHRCGLPREIAIELFQTFLIRSLIRKHF-------------    
131 RPOC_CHLVU/398  89.5%  27.2%     LLDGLKGKK--GRFRQHLLGKRVDYSGRSVIVVG-PKLKLHQCGLPKEMAVELFQPFIIQQLRLQGI-------------    
132 RPOC_MAIZE/262  91.1%  27.8%     LSDVIEGKE--GRFRETLLGKRVDYSGRSVIVVG-PSLSLHQCGLPLEIAIKLFQLFVIRDLITKRA-------------    
133 RPOC_SINAL/270  91.4%  28.2%     FSDVIEGKE--GRFRETLLGKRVDYSGRSVIVVG-PSLSLHRCGLPREIAIELFQTFVIRGLIRQHL-------------    
134 Q9MTM4/262-679  91.1%  27.2%     FSDVIEGKE--GRFRETLLGKRVDYSGRSVIVVG-PTLPLHRCGLPREIAIELFQTFLIRGLIRQHH-------------    
135 CAC24618/217-5  89.8%  26.5%     ITENIKGKE--GIIRENMLGKTVNFSGRSVIVVE-PTLNLNECGLPKEMAINLFYPFIIKELIKLKL-------------    
136 RPOC_EUGGR/223  92.1%  28.0%     ITEGLKGKK--GRFRENLLGKTVDYSGRSVIVVE-PKLLLHECGMPLDIALELFHPILIKMLIRFKF-------------    
137 Q9MTD4/224-565  87.5%  20.6%     FT--LQGKK--GKFRQYILGKRIDFSGRSVILPG-SDLIYKNIGLPLNLSLDLFKPMLLNFLKKDLS-------------    
138 RPOC_PLAFA/237  89.1%  19.4%     FSKTFQGKY--STIKYKLLGKRVDFSGRSVITVN-PSIIYNNIGLPYYISINLFKPFLIN-ILKYNS-------------    
    consensus/100%                   h.....tp...t.h+..h.tpt....sRssh.s.........h.hP..h.........h.....................    
    consensus/90%                    htthlpuKp..GhhRtpl.GKRls.ouRoVIsss.s.lth.phulP..hu..Lh.s.hht.h..t.h.............    
    consensus/80%                    ltphlcGKp..G+hRtsLhGKRVDaSuRoVIsss.PplphppsGlPh.hAhpLhhP.hhp.h..pth.............    
    consensus/70%                    lsphl+GKp..GRhRtNLhGKRVDaSuRoVIsss.PpLplppsGlPhphAhpLhhP.hlpthphpth.............    

                      cov    pid 241          :         .         .         .         .         3         .         . 320
  1 RPB1_SCHPO/238 100.0% 100.0%     -PDEHPG-------AKYIIR--------DTGE-------RIDLRYHKR--------------------------------    
  2 RPB0_ARATH/236 100.0%  66.0%     -PHPPPGK----TGAKYIIR--------DDGQ-------RLDLRYLKK--------------------------------    
  3 O59227/211-876  99.7%  55.2%     -PDKYPG-------ANYVID--------PEGR-------RIRIMESNKEN------------------------------    
  4 RPA1_THECE/211 100.0%  55.1%     -PEKYPG-------ANYVID--------PEGR-------RIRLMENNLE-------------------------------    
  5 RPA1_METTH/201  99.7%  53.9%     -PDVHPG-------ANYVIR--------PDGR-------KIRIYNETKEV------------------------------    
  6 I38186/246-895 100.0%  70.4%     -NSQYPG-------AKYIIR--------DNGD-------RIDLRFHPK--------------------------------    
  7 RPA1_SULAC/205 100.0%  56.9%     -PDKWPG-------ANYVIK--------PDGR-------RIDLRYVKDRK------------------------------    
  8 O28391/200-840  99.3%  53.1%     ---EHPK-------ANYIVR--------PDGR-------RIRVIESNKE-------------------------------    
  9 RPB1_YEAST/232 100.0%  77.6%     -PNEHPG-------AKYVIR--------DSGD-------RIDLRYSKR--------------------------------    
 10 O96446/203-874  99.3%  67.8%     -PNEYPG-------ANYVIR--------NDGQ-------RIDLNFN----------------------------------    
 11 AAK40566/205-8 100.0%  57.5%     -PDKWPG-------ANYVIR--------PDGR-------RIDLRYVKDRK------------------------------    
 12 O00820/160-801 100.0%  71.5%     -PTEHPG-------AKYIIR--------DDGQ-------RLDLRFARK--------------------------------    
 13 Q9HGZ5/244-892 100.0%  74.9%     -PNEHPG-------ARYIVR--------DNGE-------RIDLRHAKR--------------------------------    
 14 RPC1_HUMAN/248  99.7%  46.3%     -PEVHPG-------ANFIQQ-------RHTQM-------KRFLKYGNRE-------------------------------    
 15 AAK00312/167-8 100.0%  68.5%     -TNEYPG-------ANRVIR--------ANGD-------IVSLKHTAG--------------------------------    
 16 Q18566/244-902  99.7%  45.6%     -SDVHPG-------ANYLVE-------KKTGN-------KKLLKYGKRD-------------------------------    
 17 Q23699/157-806 100.0%  66.8%     -ANQYPG-------AKYIIR--------DNGE-------RIDLRFHPK--------------------------------    
 18 RPA1_METVA/208 100.0%  51.4%     -SDKHPG-------VNYVIKKV----KTKDGKEE---EYKIKITDTNKK-------------------------------    
 19 Q25203/160-809 100.0%  66.4%     -ANVYPG-------AKYIIR--------DNGE-------RIDLRFHPK--------------------------------    
 20 RPC1_SCHPO/244  99.3%  44.8%     -PDVHPG-------ANYVID-------RESGF-------KRFLRFGNRN-------------------------------    
 21 RPC1_YEAST/254 100.0%  45.2%     -PNVHPG-------ANYLLK-------RNEDA-------RRNLRYGDRM-------------------------------    
 22 RPA1_HALHA/277 100.0%  52.5%     -PEGHPG-------ANYVTR--------PDGR-------RVRVTEKVCE-------------------------------    
 23 O96452/201-827  99.3%  65.8%     -PNKYPG-------ANYLIR--------RDGQ-------RIDLNFS----------------------------------    
 24 Q17085/158-807 100.0%  67.1%     -NSQYPG-------AKYIIR--------ENGE-------RIDLRYHPK--------------------------------    
 25 Q25151/153-802 100.0%  64.5%     -ANQYPG-------AKFILR--------ETGD-------RIDLRYHPK--------------------------------    
 26 AAK00310/218-8 100.0%  62.8%     -PNEYPG-------AKYIER--------LDGS-------KVNLAFVKN--------------------------------    
 27 RPA1_THEAC/207 100.0%  48.7%     FGRYVTG-------VNYVIR--------PDGR-------RIKITDQNAA-------------------------------    
 28 Q27095/244-890 100.0%  54.4%     -HDDLGG-------ANFVIN--------DHGT-------RTDLSCCTD--------------------------------    
 29 Q20090/240-885  98.7%  65.5%     -DTQYPG-----------AK--------ENGA-------RVDLRYHPR--------------------------------    
 30 O09451/140-784  99.7%  65.6%     -PDEYPG-------AKYIER--------EDGF-------KVNLAYVRN--------------------------------    
 31 AAK00309/141-7  99.7%  65.2%     -PTEYPG-------AKYIER--------DDGQ-------KVNLSYVAD--------------------------------    
 32 O04142/158-802 100.0%  69.1%     -PDEYPD-------AKYIQR--------DDGY-------QVNLAYVRN--------------------------------    
 33 RPB2_TRYBB/242  98.7%  53.3%     -RTVYPS-------ANYIHH--------PNGT-------ITKLALLRD--------------------------------    
 34 Q9YAU1/216-866 100.0%  49.8%     -PDKWPG-------ALFVYK--------ASER------KKYDLRFFKDYE------------------------------    
 35 RPC1_TRYBB/256  98.4%  41.4%     -PHVHPG-------ATTVYL-------AQEGS-------KKSLKNERDRH------------------------------    
 36 RPA1_MOUSE/302  99.3%  28.0%     -PNVHPG-------ASMVIN--------EDGS-------RTALSSVDAAQ------------------------------    
 37 4995/358-1067   99.3%  30.4%     -PHKWPG-------ASHIQN--------EDGT-------LISLMPLTIEQ------------------------------    
 38 O77375/266-102  99.7%  60.9%     -PYEWPG-------AKYIIR--------DNGT-------KYDLRHVRR--------------------------------    
 39 AAK00311/165-8 100.0%  60.2%     -PTQHPG-------ARYIIQ--------EDGT-------RIDLHIARS--------------------------------    
 40 AAK00313/133-7 100.0%  63.2%     -PNIWPG-------AKYIIR--------HDDR-------QIDLSQMRN--------------------------------    
 41 O61119/163-757 100.0%  77.0%     -PSEHPG-------AKYIIR--------EDGT-------RFDLRFVKK--------------------------------    
 42 13310932/218-8  98.7%  52.6%     -RTTYPS-------ANYIIR--------PNGN-------VTKLALVKD--------------------------------    
 43 O17628/351-105  99.7%  29.8%     -PHQHPG-------ANFFVE--------PSGK-------KTMLGDKPEEKK-----------------------------    
 44 RPA1_HUMAN/295  99.3%  28.3%     -PNVHPG-------ASMVIN--------EDGS-------RTALSAVDMTQ------------------------------    
 45 RPA1_DROME/293  98.7%  32.2%     -PDVHPG-------ANYIQD--------KNGF-------TTYIPADNASK------------------------------    
 46 RPA1_YEAST/353  99.7%  34.2%     -PDKWPG-------ATQIQN--------EDGS-------LVSLIGMSVEQ------------------------------    
 47 AAK15346/218-8  98.7%  52.3%     ---TYPS-------ANYIMR--------PNGN-------VTKLALVKD--------------------------------    
 48 G69698/224-835  90.8%  31.2%     ---------------------------------------AHNIKSAKR--------------------------------    
 49 CAC33868/123-8  99.3%  65.5%     -PNKWPG-------ANFVTR--------EDGQ-------RIDLRFNRN--------------------------------    
 50 O77165/146-800  98.0%  57.2%     -PGTYPG-------AKYVIR--------DDGA-------RIALTSR----------------------------------    
 51 Q9HWC9/235-831  90.8%  30.2%     ---------------------------------------ATTIKAAKK--------------------------------    
 52 RPOC_AQUPY/366  90.5%  28.9%     ---------------------------------------ATSIKHAKK--------------------------------    
 53 12722150/236-8  90.8%  28.9%     ---------------------------------------ASTIKAAKK--------------------------------    
 54 CAC27103/217-8 100.0%  61.2%     -PYKHPG-------AKYLIR--------NDNN-------RIDLRYVKY--------------------------------    
 55 RPOC_BACHD/224  90.8%  31.2%     ---------------------------------------AHNIKSAKR--------------------------------    
 56 RPOC_BACAN/224  90.8%  31.5%     ---------------------------------------AHNIKSAKR--------------------------------    
 57 RPOC_ECOLI/235  90.8%  30.2%     ---------------------------------------ATTIKAAKK--------------------------------    
 58 CAC33863/114-7  99.0%  66.4%     -PAQYPG-------ANYVIR--------GDGM-------KIDLRFTRS--------------------------------    
 59 RPOC_RICPR/235  91.1%  29.0%     ---------------------------------------ATTIKAAKR--------------------------------    
 60 Q9KV29/235-831  90.8%  30.5%     ---------------------------------------ATTIKAAKK--------------------------------    
 61 Q9KW13/235-831  90.8%  30.8%     ---------------------------------------ATTIKAAKK--------------------------------    
 62 CAC33864/178-8  98.7%  62.7%     -PNRWPG-------ANFVTR--------EDEQ-------KIGLRFNRNSV------------------------------    
 63 Q9LVH0/251-907  98.7%  42.7%     -PNKYPG-------ARNVRY--------PDGS------SRTLVGDYRK--------------------------------    
 64 RPOC_PSEPU/246  90.8%  28.9%     ---------------------------------------ATTIKAAKK--------------------------------    
 65 O25806/1624-21  90.8%  32.8%     ---------------------------------------ATTLKQAKR--------------------------------    
 66 RPOC_LISMU/224  90.8%  31.2%     ---------------------------------------AHNIKSAKR--------------------------------    
 67 RPOC_BORBU/224  90.8%  28.2%     ---------------------------------------VFNIKRAKN--------------------------------    
 68 Q9K1J1/237-833  90.8%  28.9%     ---------------------------------------ASTVKAAKK--------------------------------    
 69 AAK22490/237-8  90.8%  30.2%     ---------------------------------------SGTVKQSKR--------------------------------    
 70 RPOC_TREPA/224  90.8%  27.9%     ---------------------------------------VSNIKKAKM--------------------------------    
 71 CAC33856/129-7  99.0%  63.2%     -PFKYPG-------ANFVTR--------EDGQ-------KIDLRYN----------------------------------    
 72 7189607/242-83  90.8%  29.5%     ---------------------------------------VYTIRSAKK--------------------------------    
 73 Q9PA87/258-854  90.8%  30.8%     ---------------------------------------ATTIKAAKK--------------------------------    
 74 BAB41732/224-8  90.8%  30.5%     ---------------------------------------ATNIKNAKS--------------------------------    
 75 A45597/244-101  99.3%  32.3%     -CNKWPG-------ANYIIKK------SKKGTDP---YSDISTSYNNNSNNISSIGCSNIFNVVNNYINNNCKNVRYNIK    
 76 14021284/237-8  90.8%  29.5%     ---------------------------------------SSTVKQAKK--------------------------------    
 77 RPOC_MYCLE/310  90.8%  28.6%     ---------------------------------------AQNIKSAKR--------------------------------    
 78 RPOC_THEMA/519  92.8%  29.6%     ---------------------------------------KTMRKVKKA--------------------------------    
 79 RPOC_CAMJE/257  90.8%  30.5%     ---------------------------------------ATTVKQAKK--------------------------------    
 80 RPOC_BROTH/224  90.8%  30.8%     ---------------------------------------AHNIKSAKR--------------------------------    
 81 12724824/216-8  90.8%  31.8%     ---------------------------------------AANIRAAKR--------------------------------    
 82 Q26793/371-105  98.0%  30.6%     -PRKYPG-------ATHIELR------HANGEI-----RSVDLNVPEQTR------------------------------    
 83 Q9L0K9/310-901  90.8%  28.2%     ---------------------------------------AQNIKSAKR--------------------------------    
 84 Q89506/216-991  99.7%  28.5%     VKKNESGQEIKNNLAAAINNHG----TPLQHDDI---IKRPKITNNHEEKHNYEEKHN----------------------    
 85 AAK33217/225-8  90.8%  31.2%     ---------------------------------------AGNVKAAKR--------------------------------    
 86 RPOC_BUCAI/235  90.8%  29.9%     ---------------------------------------ATTIKAAKK--------------------------------    
 87 RPOC_MYCGE/297  93.8%  28.8%     -NEIRPI--------------------------------AASIRQAED--------------------------------    
 88 T10432/224-835  90.8%  29.9%     ---------------------------------------ASNIKNAKR--------------------------------    
 89 RPOC_WEIPA/158  90.8%  30.2%     ---------------------------------------AGNIRAAKR--------------------------------    
 90 RPOC_OENOE/159  92.1%  31.5%     ------G--------------------------------ANNLRSARR--------------------------------    
 91 RPO1_ASFB7/194  98.4%  32.2%     -KRQYPG-------CSRVYK-------------------QITQSVHDIEG------------------------------    
 92 Q9VXP9/247-780  99.7%  45.9%     -PSMHPG-------ANYVQQ-------RGSSF-------KKYLAYGNRE-------------------------------    
 93 RPOC_LEUPS/158  90.8%  30.2%     ---------------------------------------AGNVKSAKR--------------------------------    
 94 Q83066/153-772  94.1%  30.5%     AKYCIPT-----DRQKYVLIHGDSIACSKNGQ-------EFMVTDCNAVVPDN---------------------------    
 95 Q9KWU6/510-112  91.1%  27.3%     ---------------------------------------APNVKAARR--------------------------------    
 96 Q9SVY0/339-106  96.4%  32.2%     -PDIHPG-------ATHYSD-------------------KSSTMKLPSTEK-----------------------------    
 97 Q9F3X7/244-828  91.1%  28.0%     ---------------------------------------VKTVKSARR--------------------------------    
 98 RPC1_GIALA/304  98.7%  24.3%     --KTYPG-------ANEVLL--------LNDTIRYNPALKRLGIDVKQSRDMEAKAMELVSRCVDTFNLNSLCADLPELQ    
 99 O21238/230-831  91.4%  22.4%     ---------------------------------------QTSLKNLKTYDD-----------------------------    
100 Q9RVW0/527-114  91.1%  26.4%     ---------------------------------------VTNIKQARK--------------------------------    
101 AAK39916/209-8  98.4%  38.0%     -NDRYPG-------VVSVIT--------RDNK-------KIFLNKSNKK-------------------------------    
102 Q9PQV5/293-939  92.1%  28.8%     ----------------------------ELGNEI--QPICANIKLAEQ--------------------------------    
103 RPO1_VACCV/188  90.1%  22.4%     --------------VKFYFN-------------------KRLNQLTRIRQG-----------------------------    
104 Q98246/187-789  90.5%  23.4%     --------------VKFYFN-------------------KRLGQLTRIKPN-----------------------------    
105 O04206/155-765  94.7%  26.6%     ------------LCLSYTQG-------------------STTYSLRDGS-------------------------------    
106 Q9QBB0/186-787  90.1%  22.8%     --------------IKFYFN-------------------KRLNQLTRIKPG-----------------------------    
107 Q9Q8N2/186-787  90.1%  22.4%     --------------IKFYFN-------------------KRLNQLTRIKQG-----------------------------    
108 AAK43568/143-7  90.1%  22.8%     --------------IKFYFN-------------------KRLNQLTRIKQG-----------------------------    
109 Q9YW50/209-820  91.4%  18.5%     -PD-----------VKFIVLY-----NYEALK------PATILEVRPEA-------------------------------    
110 Q9QTF4/174-755  92.1%  34.6%     ---------------------------------------LKALYDVDG--------------------------------    
111 Q26008/632-193  92.8%  30.4%     -PNIYPG-----------------------ALSYRDSNGRVFKLSHKYE-------------------------------    
112 AAK28423/204-7  90.8%  27.9%     ---------------------------------------ISNINFIDD--------------------------------    
113 AAK28421/207-7  90.5%  25.6%     ---------------------------------------ITTISFIEY--------------------------------    
114 AAK28425/204-7  90.8%  27.6%     ---------------------------------------ISNINYIDE--------------------------------    
115 Q9J593/186-790  90.1%  21.2%     --------------IKYYFN-------------------KQLHQLTKIKQN-----------------------------    
116 CAC27032/308-1  89.5%  25.1%     -----------------------------------------FLDFLKIKN------------------------------    
117 AAK17076/209-7  89.8%  25.1%     ---------------------------------------ITTISFIDDYYK-----------------------------    
118 RPOC_ANASP/242  90.8%  29.2%     ---------------------------------------VNNIKAAKK--------------------------------    
119 Q9EMI5/198-807  90.8%  20.3%     ------------NKIKYILLY-----RYDQLK------PTTLLKIKPQS-------------------------------    
120 RPOC_GUITH/241  90.8%  29.5%     ---------------------------------------VNNIKAAKR--------------------------------    
121 RPOC_PORPU/247  90.8%  30.2%     ---------------------------------------VNNIKAAKK--------------------------------    
122 RPOC_SYNY3/242  90.8%  28.6%     ---------------------------------------VNNIKAAKK--------------------------------    
123 O19897/243-633  90.8%  27.9%     ---------------------------------------ANNMKSAKK--------------------------------    
124 RPOC_MESVI/280  90.8%  27.6%     ---------------------------------------ANNIKGAKK--------------------------------    
125 RPOC_CYAPA/246  90.8%  27.3%     ---------------------------------------VNNIKAAKK--------------------------------    
126 Q9TL05/385-847  90.8%  27.0%     ---------------------------------------APNIRYAKK--------------------------------    
127 RPOC_ODOSI/461  90.8%  28.9%     ---------------------------------------ASNMKIARN--------------------------------    
128 RPOC_MARPO/262  91.1%  27.5%     ---------------------------------------APNLRAAKT--------------------------------    
129 RPOC_PINTH/278  90.8%  28.5%     ---------------------------------------APNLRTAKS--------------------------------    
130 BAB33195/264-6  91.4%  27.9%     ---------------------------------------ASNIGVAKS--------------------------------    
131 RPOC_CHLVU/398  89.5%  27.2%     ---------------------------------------VFTVTAAKV--------------------------------    
132 RPOC_MAIZE/262  91.1%  27.8%     ---------------------------------------TSNVRIAKR--------------------------------    
133 RPOC_SINAL/270  91.4%  28.2%     ---------------------------------------ASNIGVAKS--------------------------------    
134 Q9MTM4/262-679  91.1%  27.2%     ---------------------------------------ASDIVGAKS--------------------------------    
135 CAC24618/217-5  89.8%  26.5%     ------------------------------------------IKRLYK--------------------------------    
136 RPOC_EUGGR/223  92.1%  28.0%     ---------------------------------------SVGIREAKR--------------------------------    
137 Q9MTD4/224-565  87.5%  20.6%     -----------------------------------------IITLLRA--------------------------------    
138 RPOC_PLAFA/237  89.1%  19.4%     ---------------------------------------KLNIIFKSL--------------------------------    
    consensus/100%                   ................................................................................    
    consensus/90%                    ..........................................ht....................................    
    consensus/80%                    .......................................t.tlp.hpt................................    
    consensus/70%                    .......................................thslphscp................................    

                      cov    pid 321          .         .         :         .         .         .         .         4 400
  1 RPB1_SCHPO/238 100.0% 100.0%     --------------------------------------------------------------------------------    
  2 RPB0_ARATH/236 100.0%  66.0%     --------------------------------------------------------------------------------    
  3 O59227/211-876  99.7%  55.2%     --------------------------------------------------------------------------------    
  4 RPA1_THECE/211 100.0%  55.1%     --------------------------------------------------------------------------------    
  5 RPA1_METTH/201  99.7%  53.9%     --------------------------------------------------------------------------------    
  6 I38186/246-895 100.0%  70.4%     --------------------------------------------------------------------------------    
  7 RPA1_SULAC/205 100.0%  56.9%     --------------------------------------------------------------------------------    
  8 O28391/200-840  99.3%  53.1%     --------------------------------------------------------------------------------    
  9 RPB1_YEAST/232 100.0%  77.6%     --------------------------------------------------------------------------------    
 10 O96446/203-874  99.3%  67.8%     --------------------------------------------------------------------------------    
 11 AAK40566/205-8 100.0%  57.5%     --------------------------------------------------------------------------------    
 12 O00820/160-801 100.0%  71.5%     --------------------------------------------------------------------------------    
 13 Q9HGZ5/244-892 100.0%  74.9%     --------------------------------------------------------------------------------    
 14 RPC1_HUMAN/248  99.7%  46.3%     --------------------------------------------------------------------------------    
 15 AAK00312/167-8 100.0%  68.5%     --------------------------------------------------------------------------------    
 16 Q18566/244-902  99.7%  45.6%     --------------------------------------------------------------------------------    
 17 Q23699/157-806 100.0%  66.8%     --------------------------------------------------------------------------------    
 18 RPA1_METVA/208 100.0%  51.4%     --------------------------------------------------------------------------------    
 19 Q25203/160-809 100.0%  66.4%     --------------------------------------------------------------------------------    
 20 RPC1_SCHPO/244  99.3%  44.8%     --------------------------------------------------------------------------------    
 21 RPC1_YEAST/254 100.0%  45.2%     --------------------------------------------------------------------------------    
 22 RPA1_HALHA/277 100.0%  52.5%     --------------------------------------------------------------------------------    
 23 O96452/201-827  99.3%  65.8%     --------------------------------------------------------------------------------    
 24 Q17085/158-807 100.0%  67.1%     --------------------------------------------------------------------------------    
 25 Q25151/153-802 100.0%  64.5%     --------------------------------------------------------------------------------    
 26 AAK00310/218-8 100.0%  62.8%     --------------------------------------------------------------------------------    
 27 RPA1_THEAC/207 100.0%  48.7%     --------------------------------------------------------------------------------    
 28 Q27095/244-890 100.0%  54.4%     --------------------------------------------------------------------------------    
 29 Q20090/240-885  98.7%  65.5%     --------------------------------------------------------------------------------    
 30 O09451/140-784  99.7%  65.6%     --------------------------------------------------------------------------------    
 31 AAK00309/141-7  99.7%  65.2%     --------------------------------------------------------------------------------    
 32 O04142/158-802 100.0%  69.1%     --------------------------------------------------------------------------------    
 33 RPB2_TRYBB/242  98.7%  53.3%     --------------------------------------------------------------------------------    
 34 Q9YAU1/216-866 100.0%  49.8%     --------------------------------------------------------------------------------    
 35 RPC1_TRYBB/256  98.4%  41.4%     --------------------------------------------------------------------------------    
 36 RPA1_MOUSE/302  99.3%  28.0%     --------------------------------------------------------------------------------    
 37 4995/358-1067   99.3%  30.4%     --------------------------------------------------------------------------------    
 38 O77375/266-102  99.7%  60.9%     --------------------------------------------------------------------------------    
 39 AAK00311/165-8 100.0%  60.2%     --------------------------------------------------------------------------------    
 40 AAK00313/133-7 100.0%  63.2%     --------------------------------------------------------------------------------    
 41 O61119/163-757 100.0%  77.0%     --------------------------------------------------------------------------------    
 42 13310932/218-8  98.7%  52.6%     --------------------------------------------------------------------------------    
 43 O17628/351-105  99.7%  29.8%     --------------------------------------------------------------------------------    
 44 RPA1_HUMAN/295  99.3%  28.3%     --------------------------------------------------------------------------------    
 45 RPA1_DROME/293  98.7%  32.2%     --------------------------------------------------------------------------------    
 46 RPA1_YEAST/353  99.7%  34.2%     --------------------------------------------------------------------------------    
 47 AAK15346/218-8  98.7%  52.3%     --------------------------------------------------------------------------------    
 48 G69698/224-835  90.8%  31.2%     --------------------------------------------------------------------------------    
 49 CAC33868/123-8  99.3%  65.5%     --------------------------------------------------------------------------------    
 50 O77165/146-800  98.0%  57.2%     --------------------------------------------------------------------------------    
 51 Q9HWC9/235-831  90.8%  30.2%     --------------------------------------------------------------------------------    
 52 RPOC_AQUPY/366  90.5%  28.9%     --------------------------------------------------------------------------------    
 53 12722150/236-8  90.8%  28.9%     --------------------------------------------------------------------------------    
 54 CAC27103/217-8 100.0%  61.2%     --------------------------------------------------------------------------------    
 55 RPOC_BACHD/224  90.8%  31.2%     --------------------------------------------------------------------------------    
 56 RPOC_BACAN/224  90.8%  31.5%     --------------------------------------------------------------------------------    
 57 RPOC_ECOLI/235  90.8%  30.2%     --------------------------------------------------------------------------------    
 58 CAC33863/114-7  99.0%  66.4%     --------------------------------------------------------------------------------    
 59 RPOC_RICPR/235  91.1%  29.0%     --------------------------------------------------------------------------------    
 60 Q9KV29/235-831  90.8%  30.5%     --------------------------------------------------------------------------------    
 61 Q9KW13/235-831  90.8%  30.8%     --------------------------------------------------------------------------------    
 62 CAC33864/178-8  98.7%  62.7%     --------------------------------------------------------------------------------    
 63 Q9LVH0/251-907  98.7%  42.7%     --------------------------------------------------------------------------------    
 64 RPOC_PSEPU/246  90.8%  28.9%     --------------------------------------------------------------------------------    
 65 O25806/1624-21  90.8%  32.8%     --------------------------------------------------------------------------------    
 66 RPOC_LISMU/224  90.8%  31.2%     --------------------------------------------------------------------------------    
 67 RPOC_BORBU/224  90.8%  28.2%     --------------------------------------------------------------------------------    
 68 Q9K1J1/237-833  90.8%  28.9%     --------------------------------------------------------------------------------    
 69 AAK22490/237-8  90.8%  30.2%     --------------------------------------------------------------------------------    
 70 RPOC_TREPA/224  90.8%  27.9%     --------------------------------------------------------------------------------    
 71 CAC33856/129-7  99.0%  63.2%     --------------------------------------------------------------------------------    
 72 7189607/242-83  90.8%  29.5%     --------------------------------------------------------------------------------    
 73 Q9PA87/258-854  90.8%  30.8%     --------------------------------------------------------------------------------    
 74 BAB41732/224-8  90.8%  30.5%     --------------------------------------------------------------------------------    
 75 A45597/244-101  99.3%  32.3%     DVNNNVLLKDMCDINNMNNDINN-----------------------------------------------NINNIYKNTS    
 76 14021284/237-8  90.8%  29.5%     --------------------------------------------------------------------------------    
 77 RPOC_MYCLE/310  90.8%  28.6%     --------------------------------------------------------------------------------    
 78 RPOC_THEMA/519  92.8%  29.6%     --------------------------------------------------------------------------------    
 79 RPOC_CAMJE/257  90.8%  30.5%     --------------------------------------------------------------------------------    
 80 RPOC_BROTH/224  90.8%  30.8%     --------------------------------------------------------------------------------    
 81 12724824/216-8  90.8%  31.8%     --------------------------------------------------------------------------------    
 82 Q26793/371-105  98.0%  30.6%     --------------------------------------------------------------------------------    
 83 Q9L0K9/310-901  90.8%  28.2%     --------------------------------------------------------------------------------    
 84 Q89506/216-991  99.7%  28.5%     --------------------------------------------------------------------------------    
 85 AAK33217/225-8  90.8%  31.2%     --------------------------------------------------------------------------------    
 86 RPOC_BUCAI/235  90.8%  29.9%     --------------------------------------------------------------------------------    
 87 RPOC_MYCGE/297  93.8%  28.8%     --------------------------------------------------------------------------------    
 88 T10432/224-835  90.8%  29.9%     --------------------------------------------------------------------------------    
 89 RPOC_WEIPA/158  90.8%  30.2%     --------------------------------------------------------------------------------    
 90 RPOC_OENOE/159  92.1%  31.5%     --------------------------------------------------------------------------------    
 91 RPO1_ASFB7/194  98.4%  32.2%     --------------------------------------------------------------------------------    
 92 Q9VXP9/247-780  99.7%  45.9%     --------------------------------------------------------------------------------    
 93 RPOC_LEUPS/158  90.8%  30.2%     --------------------------------------------------------------------------------    
 94 Q83066/153-772  94.1%  30.5%     --------------------------------------------------------------------------------    
 95 Q9KWU6/510-112  91.1%  27.3%     --------------------------------------------------------------------------------    
 96 Q9SVY0/339-106  96.4%  32.2%     --------------------------------------------------------------------------------    
 97 Q9F3X7/244-828  91.1%  28.0%     --------------------------------------------------------------------------------    
 98 RPC1_GIALA/304  98.7%  24.3%     AAIQHLVSESSNAINSELKAEDLPQNQPLFAKEVYDPAQKGESNNIDNNVCEIDELKLEDTADYQVGESAGQASTVAVEQ    
 99 O21238/230-831  91.4%  22.4%     --------------------------------------------------------------------------------    
100 Q9RVW0/527-114  91.1%  26.4%     --------------------------------------------------------------------------------    
101 AAK39916/209-8  98.4%  38.0%     --------------------------------------------------------------------------------    
102 Q9PQV5/293-939  92.1%  28.8%     --------------------------------------------------------------------------------    
103 RPO1_VACCV/188  90.1%  22.4%     --------------------------------------------------------------------------------    
104 Q98246/187-789  90.5%  23.4%     --------------------------------------------------------------------------------    
105 O04206/155-765  94.7%  26.6%     --------------------------------------------------------------------------------    
106 Q9QBB0/186-787  90.1%  22.8%     --------------------------------------------------------------------------------    
107 Q9Q8N2/186-787  90.1%  22.4%     --------------------------------------------------------------------------------    
108 AAK43568/143-7  90.1%  22.8%     --------------------------------------------------------------------------------    
109 Q9YW50/209-820  91.4%  18.5%     --------------------------------------------------------------------------------    
110 Q9QTF4/174-755  92.1%  34.6%     --------------------------------------------------------------------------------    
111 Q26008/632-193  92.8%  30.4%     --------------------------------------------------------------------------------    
112 AAK28423/204-7  90.8%  27.9%     --------------------------------------------------------------------------------    
113 AAK28421/207-7  90.5%  25.6%     --------------------------------------------------------------------------------    
114 AAK28425/204-7  90.8%  27.6%     --------------------------------------------------------------------------------    
115 Q9J593/186-790  90.1%  21.2%     --------------------------------------------------------------------------------    
116 CAC27032/308-1  89.5%  25.1%     --------------------------------------------------------------------------------    
117 AAK17076/209-7  89.8%  25.1%     --------------------------------------------------------------------------------    
118 RPOC_ANASP/242  90.8%  29.2%     --------------------------------------------------------------------------------    
119 Q9EMI5/198-807  90.8%  20.3%     --------------------------------------------------------------------------------    
120 RPOC_GUITH/241  90.8%  29.5%     --------------------------------------------------------------------------------    
121 RPOC_PORPU/247  90.8%  30.2%     --------------------------------------------------------------------------------    
122 RPOC_SYNY3/242  90.8%  28.6%     --------------------------------------------------------------------------------    
123 O19897/243-633  90.8%  27.9%     --------------------------------------------------------------------------------    
124 RPOC_MESVI/280  90.8%  27.6%     --------------------------------------------------------------------------------    
125 RPOC_CYAPA/246  90.8%  27.3%     --------------------------------------------------------------------------------    
126 Q9TL05/385-847  90.8%  27.0%     --------------------------------------------------------------------------------    
127 RPOC_ODOSI/461  90.8%  28.9%     --------------------------------------------------------------------------------    
128 RPOC_MARPO/262  91.1%  27.5%     --------------------------------------------------------------------------------    
129 RPOC_PINTH/278  90.8%  28.5%     --------------------------------------------------------------------------------    
130 BAB33195/264-6  91.4%  27.9%     --------------------------------------------------------------------------------    
131 RPOC_CHLVU/398  89.5%  27.2%     --------------------------------------------------------------------------------    
132 RPOC_MAIZE/262  91.1%  27.8%     --------------------------------------------------------------------------------    
133 RPOC_SINAL/270  91.4%  28.2%     --------------------------------------------------------------------------------    
134 Q9MTM4/262-679  91.1%  27.2%     --------------------------------------------------------------------------------    
135 CAC24618/217-5  89.8%  26.5%     --------------------------------------------------------------------------------    
136 RPOC_EUGGR/223  92.1%  28.0%     --------------------------------------------------------------------------------    
137 Q9MTD4/224-565  87.5%  20.6%     --------------------------------------------------------------------------------    
138 RPOC_PLAFA/237  89.1%  19.4%     --------------------------------------------------------------------------------    
    consensus/100%                   ................................................................................    
    consensus/90%                    ................................................................................    
    consensus/80%                    ................................................................................    
    consensus/70%                    ................................................................................    

                      cov    pid 401          .         .         .         .         :         .         .         . 480
  1 RPB1_SCHPO/238 100.0% 100.0%     ---------------------------------------------AGDIPLRYGW-------------------------    
  2 RPB0_ARATH/236 100.0%  66.0%     ---------------------------------------------SSDQHLELGYRYVLLSYSIHSTHKRLF--------    
  3 O59227/211-876  99.7%  55.2%     ----------------------------------------------LAKMIDIGW-------------------------    
  4 RPA1_THECE/211 100.0%  55.1%     ---------------------------------------------TVAEKLDIGW-------------------------    
  5 RPA1_METTH/201  99.7%  53.9%     ----------------------------------------------VLENLKPGY-------------------------    
  6 I38186/246-895 100.0%  70.4%     ---------------------------------------------PSDLHLQTGY-------------------------    
  7 RPA1_SULAC/205 100.0%  56.9%     ---------------------------------------------ELASSITAGY-------------------------    
  8 O28391/200-840  99.3%  53.1%     ---------------------------------------------ELAEKLEPGW-------------------------    
  9 RPB1_YEAST/232 100.0%  77.6%     ---------------------------------------------AGDIQLQYGW-------------------------    
 10 O96446/203-874  99.3%  67.8%     ---------------------------------------------RGDIKLEEGY-------------------------    
 11 AAK40566/205-8 100.0%  57.5%     ---------------------------------------------ELASTLAPGY-------------------------    
 12 O00820/160-801 100.0%  71.5%     ---------------------------------------------ASDLHLEYGY-------------------------    
 13 Q9HGZ5/244-892 100.0%  74.9%     ---------------------------------------------AGGQQLLYGW-------------------------    
 14 RPC1_HUMAN/248  99.7%  46.3%     ---------------------------------------------KMAQELKYGD-------------------------    
 15 AAK00312/167-8 100.0%  68.5%     ---------------------------------------------SGETLLNIGD-------------------------    
 16 Q18566/244-902  99.7%  45.6%     ---------------------------------------------ELAKNLRMGD-------------------------    
 17 Q23699/157-806 100.0%  66.8%     ---------------------------------------------ASDLHLQIGY-------------------------    
 18 RPA1_METVA/208 100.0%  51.4%     ---------------------------------------------MWVENIVDGM-------------------------    
 19 Q25203/160-809 100.0%  66.4%     ---------------------------------------------ASDLHLQIGY-------------------------    
 20 RPC1_SCHPO/244  99.3%  44.8%     ---------------------------------------------RIADDLKIGD-------------------------    
 21 RPC1_YEAST/254 100.0%  45.2%     ---------------------------------------------KLAKNLQIGD-------------------------    
 22 RPA1_HALHA/277 100.0%  52.5%     ---------------------------------------------ELAERVEPGW-------------------------    
 23 O96452/201-827  99.3%  65.8%     ---------------------------------------------RGDVILEEGY-------------------------    
 24 Q17085/158-807 100.0%  67.1%     ---------------------------------------------TTDLHLQFGY-------------------------    
 25 Q25151/153-802 100.0%  64.5%     ---------------------------------------------STDLHLQFGY-------------------------    
 26 AAK00310/218-8 100.0%  62.8%     ---------------------------------------------RSDIHLNNGE-------------------------    
 27 RPA1_THEAC/207 100.0%  48.7%     ---------------------------------------------ENADRIDIGW-------------------------    
 28 Q27095/244-890 100.0%  54.4%     ---------------------------------------------LSTITLSPGY-------------------------    
 29 Q20090/240-885  98.7%  65.5%     ---------------------------------------------AADLHLQPGY-------------------------    
 30 O09451/140-784  99.7%  65.6%     ---------------------------------------------RSELQLELGY-------------------------    
 31 AAK00309/141-7  99.7%  65.2%     ---------------------------------------------RTSTNLEIGF-------------------------    
 32 O04142/158-802 100.0%  69.1%     ---------------------------------------------RADVQLEIGY-------------------------    
 33 RPB2_TRYBB/242  98.7%  53.3%     ---------------------------------------------RSKVTLNIGD-------------------------    
 34 Q9YAU1/216-866 100.0%  49.8%     ---------------------------------------------KLAESLEPGD-------------------------    
 35 RPC1_TRYBB/256  98.4%  41.4%     ---------------------------------------------RLAARLAVGD-------------------------    
 36 RPA1_MOUSE/302  99.3%  28.0%     -------------------------------------------REAVAKQLLTPATG-----------------------    
 37 4995/358-1067   99.3%  30.4%     -------------------------------------------RTALANQLLTPQSNLISSPYSYSRLI-----------    
 38 O77375/266-102  99.7%  60.9%     ---------------------------------------------NSEKELEYGY-------------------------    
 39 AAK00311/165-8 100.0%  60.2%     ---------------------------------------------HSDRTLQPGF-------------------------    
 40 AAK00313/133-7 100.0%  63.2%     ---------------------------------------------RSEATIHPGF-------------------------    
 41 O61119/163-757 100.0%  77.0%     ---------------------------------------------VSDTHLECGY-------------------------    
 42 13310932/218-8  98.7%  52.6%     ---------------------------------------------RNAVHLDVGD-------------------------    
 43 O17628/351-105  99.7%  29.8%     ------------------------------------------RRMQMAKTLNAATTE-----------------------    
 44 RPA1_HUMAN/295  99.3%  28.3%     -------------------------------------------REAVAKQLLTPATG-----------------------    
 45 RPA1_DROME/293  98.7%  32.2%     -------------------------------------------RESLAKLLLSNP-------------------------    
 46 RPA1_YEAST/353  99.7%  34.2%     -------------------------------------------RKALANQLLTPSSN-----------------------    
 47 AAK15346/218-8  98.7%  52.3%     ---------------------------------------------RSAVHLDVGD-------------------------    
 48 G69698/224-835  90.8%  31.2%     ---------------------------------------------KIERVQPEVW-------------------------    
 49 CAC33868/123-8  99.3%  65.5%     -----------------------------------------------SILLTEGC-------------------------    
 50 O77165/146-800  98.0%  57.2%     ----------------------------------------------GDMPIVPGY-------------------------    
 51 Q9HWC9/235-831  90.8%  30.2%     ---------------------------------------------MVERELPEVW-------------------------    
 52 RPOC_AQUPY/366  90.5%  28.9%     ---------------------------------------------LVEQKTPEVW-------------------------    
 53 12722150/236-8  90.8%  28.9%     ---------------------------------------------MVEREDAIVW-------------------------    
 54 CAC27103/217-8 100.0%  61.2%     ---------------------------------------------LSNINLENGY-------------------------    
 55 RPOC_BACHD/224  90.8%  31.2%     ---------------------------------------------KVERVQPEVW-------------------------    
 56 RPOC_BACAN/224  90.8%  31.5%     ---------------------------------------------KIERVQPEVW-------------------------    
 57 RPOC_ECOLI/235  90.8%  30.2%     ---------------------------------------------MVEREEAVVW-------------------------    
 58 CAC33863/114-7  99.0%  66.4%     ------------------------------------------------VELQIGW-------------------------    
 59 RPOC_RICPR/235  91.1%  29.0%     ---------------------------------------------MVEAEKPEVW-------------------------    
 60 Q9KV29/235-831  90.8%  30.5%     ---------------------------------------------MVEREEAVVW-------------------------    
 61 Q9KW13/235-831  90.8%  30.8%     ---------------------------------------------MVEREVPEVW-------------------------    
 62 CAC33864/178-8  98.7%  62.7%     -------------------------------------------------LLTEGC-------------------------    
 63 Q9LVH0/251-907  98.7%  42.7%     ---------------------------------------------RIADELAIGC-------------------------    
 64 RPOC_PSEPU/246  90.8%  28.9%     ---------------------------------------------MVERELPEVW-------------------------    
 65 O25806/1624-21  90.8%  32.8%     ---------------------------------------------MIEQKSNEVW-------------------------    
 66 RPOC_LISMU/224  90.8%  31.2%     ---------------------------------------------KIERMAAEVW-------------------------    
 67 RPOC_BORBU/224  90.8%  28.2%     ---------------------------------------------LIEQEVDEVW-------------------------    
 68 Q9K1J1/237-833  90.8%  28.9%     ---------------------------------------------LVEQEVPEVW-------------------------    
 69 AAK22490/237-8  90.8%  30.2%     ---------------------------------------------MVEREQPQVW-------------------------    
 70 RPOC_TREPA/224  90.8%  27.9%     ---------------------------------------------LVEQESPKVF-------------------------    
 71 CAC33856/129-7  99.0%  63.2%     ---------------------------------------------KSNLILTIGC-------------------------    
 72 7189607/242-83  90.8%  29.5%     ---------------------------------------------MIQRGAPEVW-------------------------    
 73 Q9PA87/258-854  90.8%  30.8%     ---------------------------------------------LVEREEAEVW-------------------------    
 74 BAB41732/224-8  90.8%  30.5%     ---------------------------------------------KIERMDDEVW-------------------------    
 75 A45597/244-101  99.3%  32.3%     ETNLCNVNNHNNNNNIYCNNQTQDNEEERKNSQFNKISLKYANKNHVIQNLNIGD-------------------------    
 76 14021284/237-8  90.8%  29.5%     ---------------------------------------------LVEKERPEVW-------------------------    
 77 RPOC_MYCLE/310  90.8%  28.6%     ---------------------------------------------MVERQRPQVW-------------------------    
 78 RPOC_THEMA/519  92.8%  29.6%     ---------------------------------------------IIEKEMPEAW-------------------------    
 79 RPOC_CAMJE/257  90.8%  30.5%     ---------------------------------------------MIENKTNEVW-------------------------    
 80 RPOC_BROTH/224  90.8%  30.8%     ---------------------------------------------KIERHSPEIW-------------------------    
 81 12724824/216-8  90.8%  31.8%     ---------------------------------------------KVERQDSDVW-------------------------    
 82 Q26793/371-105  98.0%  30.6%     -------------------------------------------RQHAARFFAMAQSG-----------------------    
 83 Q9L0K9/310-901  90.8%  28.2%     ---------------------------------------------MVERGRTVVY-------------------------    
 84 Q89506/216-991  99.7%  28.5%     ----------------------------------FDTFETIVIKDPKNFVLKEGDILFRNNFQQKVVLP-----------    
 85 AAK33217/225-8  90.8%  31.2%     ---------------------------------------------MVERGDERIW-------------------------    
 86 RPOC_BUCAI/235  90.8%  29.9%     ---------------------------------------------MVEREEAIVW-------------------------    
 87 RPOC_MYCGE/297  93.8%  28.8%     ---------------------------------------------MIKNQDDLIW-------------------------    
 88 T10432/224-835  90.8%  29.9%     ---------------------------------------------KIDRKDEEVY-------------------------    
 89 RPOC_WEIPA/158  90.8%  30.2%     ---------------------------------------------KIDRRDDDVM-------------------------    
 90 RPOC_OENOE/159  92.1%  31.5%     ---------------------------------------------LVERHEDVVQ-------------------------    
 91 RPO1_ASFB7/194  98.4%  32.2%     --------------------------------------------LKQDFRLEVGD-------------------------    
 92 Q9VXP9/247-780  99.7%  45.9%     ---------------------------------------------KVAQELKCGD-------------------------    
 93 RPOC_LEUPS/158  90.8%  30.2%     ---------------------------------------------KIDKADGDVM-------------------------    
 94 Q83066/153-772  94.1%  30.5%     ---------------------------------------FEPIKKLVPFPLPTIEIG-----------------------    
 95 Q9KWU6/510-112  91.1%  27.3%     ---------------------------------------------MLERQRDIKD-------------------------    
 96 Q9SVY0/339-106  96.4%  32.2%     ------------------------------------------ARRAIARKLLSSRGATTEL-------------------    
 97 Q9F3X7/244-828  91.1%  28.0%     ---------------------------------------------IVDKKGPEVW-------------------------    
 98 RPC1_GIALA/304  98.7%  24.3%     PPESRTVLKLNSIASLQLTNASSQHLSTFKLNTVSLLQKDRRGRQAIANSLRPND-------------------------    
 99 O21238/230-831  91.4%  22.4%     ------------------------------------------FKQILFNKFTINLVF-----------------------    
100 Q9RVW0/527-114  91.1%  26.4%     ---------------------------------------------MLERYRDTRD-------------------------    
101 AAK39916/209-8  98.4%  38.0%     ---------------------------------------------NMMFFSKIGN-------------------------    
102 Q9PQV5/293-939  92.1%  28.8%     ---------------------------------------------KILAQDNEIW-------------------------    
103 RPO1_VACCV/188  90.1%  22.4%     ------------------------------------------KFIKNKIHLLPGD-------------------------    
104 Q98246/187-789  90.5%  23.4%     ------------------------------------------KFVKNKIHLLPGD-------------------------    
105 O04206/155-765  94.7%  26.6%     ---------------------------------------------KGHTELKPGQ-------------------------    
106 Q9QBB0/186-787  90.1%  22.8%     ------------------------------------------KFIKNKIHMLPGD-------------------------    
107 Q9Q8N2/186-787  90.1%  22.4%     ------------------------------------------KFIKNKIHMLSGD-------------------------    
108 AAK43568/143-7  90.1%  22.8%     ------------------------------------------KFIKNKIHMLPGD-------------------------    
109 Q9YW50/209-820  91.4%  18.5%     ---------------------------------------------KINNLLKIKYGD-----------------------    
110 Q9QTF4/174-755  92.1%  34.6%     ---------------------------------------------QVRHVVRCGL-------------------------    
111 Q26008/632-193  92.8%  30.4%     -----------------------------------DRLKVIEKIEKLNFQTENSY-------------------------    
112 AAK28423/204-7  90.8%  27.9%     ---------------------------------------------YYKNNKKKII-------------------------    
113 AAK28421/207-7  90.5%  25.6%     -------------------------------------------FYKKNKKITLFY-------------------------    
114 AAK28425/204-7  90.8%  27.6%     ---------------------------------------------YYKNNKKKII-------------------------    
115 Q9J593/186-790  90.1%  21.2%     ------------------------------------------KFIKNKIHLLPGD-------------------------    
116 CAC27032/308-1  89.5%  25.1%     -------------------------------------------FKKKKLILEILNGNKISISQQDFLFKLKKISISYKYF    
117 AAK17076/209-7  89.8%  25.1%     -----------------------------------------------KNKKQIIL-------------------------    
118 RPOC_ANASP/242  90.8%  29.2%     ---------------------------------------------LISRNDPSVW-------------------------    
119 Q9EMI5/198-807  90.8%  20.3%     ---------------------------------------------RLNNLLKMKYGD-----------------------    
120 RPOC_GUITH/241  90.8%  29.5%     ---------------------------------------------LIQKNELIVW-------------------------    
121 RPOC_PORPU/247  90.8%  30.2%     ---------------------------------------------MIQKNESSIW-------------------------    
122 RPOC_SYNY3/242  90.8%  28.6%     ---------------------------------------------LILKGDPQIW-------------------------    
123 O19897/243-633  90.8%  27.9%     ---------------------------------------------LMQKHTSVTI-------------------------    
124 RPOC_MESVI/280  90.8%  27.6%     ---------------------------------------------IIQNSDPILW-------------------------    
125 RPOC_CYAPA/246  90.8%  27.3%     ---------------------------------------------LIQSNDPIIR-------------------------    
126 Q9TL05/385-847  90.8%  27.0%     ---------------------------------------------LMHHAVARGP-------------------------    
127 RPOC_ODOSI/461  90.8%  28.9%     ---------------------------------------------LIEQNEAIID-------------------------    
128 RPOC_MARPO/262  91.1%  27.5%     ---------------------------------------------MIQNKEPIIW-------------------------    
129 RPOC_PINTH/278  90.8%  28.5%     ---------------------------------------------MIRDKGPIVW-------------------------    
130 BAB33195/264-6  91.4%  27.9%     ---------------------------------------------KIREKEPIVW-------------------------    
131 RPOC_CHLVU/398  89.5%  27.2%     ---------------------------------------------LIADRKPIVW-------------------------    
132 RPOC_MAIZE/262  91.1%  27.8%     ---------------------------------------------KIWEKEPIVW-------------------------    
133 RPOC_SINAL/270  91.4%  28.2%     ---------------------------------------------QIREKKPIVW-------------------------    
134 Q9MTM4/262-679  91.1%  27.2%     ---------------------------------------------QIREKEPIVW-------------------------    
135 CAC24618/217-5  89.8%  26.5%     ----------------------------------------------IKKITKILD-------------------------    
136 RPOC_EUGGR/223  92.1%  28.0%     ---------------------------------------------HIYNASNFVI-------------------------    
137 Q9MTD4/224-565  87.5%  20.6%     ---------------------------------------------SYITQYNPIL-------------------------    
138 RPOC_PLAFA/237  89.1%  19.4%     ---------------------------------------------LINKNLFIIQ-------------------------    
    consensus/100%                   ................................................................................    
    consensus/90%                    ...............................................t.....h..........................    
    consensus/80%                    .............................................h.t.t...s..........................    
    consensus/70%                    .............................................hhppph..sh.........................    

                      cov    pid 481          .         5         .         .         .         .         :         . 560
  1 RPB1_SCHPO/238 100.0% 100.0%     --------------RVERHIRDGDVVIFNRQPSLHKMSMMGHRIRVMPY------STFRLNLSVTSPYNADFDGDEMNMH    
  2 RPB0_ARATH/236 100.0%  66.0%     ---LEVVIFMLSWSQVERHLQDGDFVLFNRQPSLHKMSIMGHRIRIMPY------STFRLNLSVTSPYNADFDGDEMNMH    
  3 O59227/211-876  99.7%  55.2%     --------------TVERHLVDGDIVLFNRQPSLHRMSIMAHRVRVMPY------KTFRLNLAVCPPYNADFDGDEMNLH    
  4 RPA1_THECE/211 100.0%  55.1%     --------------TVERHLLDGDVVLFNRQPSLHRMSIMAHRVRVMPY------RTFRLNLSVCPPYNADFDGDEMNLH    
  5 RPA1_METTH/201  99.7%  53.9%     --------------IVERHLKDGDIVLFNRQPSLHRMSMMAHQVRVLPY------KTFRLNLCVCPPYNADFDGDEMNMH    
  6 I38186/246-895 100.0%  70.4%     --------------KVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPW------STFRLNLSVTTPYNADFDGDEMNLH    
  7 RPA1_SULAC/205 100.0%  56.9%     --------------VVERHLVDGDVVLFNRQPSLHRISMMAHKVRVLPG------RTFRLNLLDCPPYNADFDGDEMNLH    
  8 O28391/200-840  99.3%  53.1%     --------------IVERQLMDGDIVLFNRQPSLHRMSIMAHYVRVLPY------KTFRLNPAVCPPYNADFDGDEMNLH    
  9 RPB1_YEAST/232 100.0%  77.6%     --------------KVERHIMDNDPVLFNRQPSLHKMSMMAHRVKVIPY------STFRLNLSVTSPYNADFDGDEMNLH    
 10 O96446/203-874  99.3%  67.8%     --------------VVERHMQDGDVVLFNRQPSLHKMSMMAHFVRVMEG------KTFRLNLSCVSPYNADFDGDEMNLH    
 11 AAK40566/205-8 100.0%  57.5%     --------------IIERHLIDGDIVLFNRQPSLHRISMMAHRVRVLKG------LTFRLNLLVCPPYNADFDGDEMNLH    
 12 O00820/160-801 100.0%  71.5%     --------------KVERHIQDGDVIIFNRQPSLHKMSMMGHKVKIMPY------STFRLNLSVTTPYNADFDGDEMNMH    
 13 Q9HGZ5/244-892 100.0%  74.9%     --------------KVERHVMDGDVILFNRQPSLHKESMMGHRVRVMPY------STFRLNLSVTTPYNADFDGDEMNLH    
 14 RPC1_HUMAN/248  99.7%  46.3%     --------------IVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPH------RTFRFNECVCTPYNADFDGDEMNLH    
 15 AAK00312/167-8 100.0%  68.5%     --------------RVERHLVDGDYIIFNRQPSLHKMSMMGHKVRVMPF------STFRLNLSVTSPYNADFDGDEMNLH    
 16 Q18566/244-902  99.7%  45.6%     --------------TIERHLDDNDVVLFNRQPSLHKISIMSHRAKVMPG------RTFRFNECACTPYNADFDGDEMNLH    
 17 Q23699/157-806 100.0%  66.8%     --------------KVERHMQDNDYIVFNRQPTLHKMSMMCHKVKVLPW------STFRLNLSVTTPYNADFDGDEMNLH    
 18 RPA1_METVA/208 100.0%  51.4%     --------------VVERHLGDGDVVLYNRQPSLHRMSIMAHKVKVLPY------RTFRHNLCVCPPYNADFDGDEMNVH    
 19 Q25203/160-809 100.0%  66.4%     --------------KVERHMQDNDVVIFNRQPTLHKMSMMCHRVKVLPW------STFRMNLSVTTPYNADFDGDEMNLH    
 20 RPC1_SCHPO/244  99.3%  44.8%     --------------IVERHLHDNDVVLFNRQPSLHKLSIMAHLVKVRPW------RTLRFNECVCGPYNADFDGDEMNLH    
 21 RPC1_YEAST/254 100.0%  45.2%     --------------VVERHLEDGDVVLFNRQPSLHRLSILSHYAKIRPW------RTFRLNECVCTPYNADFDGDEMNLH    
 22 RPA1_HALHA/277 100.0%  52.5%     --------------EVQRHLIDGDIIIFNRQPSLHRMSIMAHEVVVMPY------KTFRLNTVVCPPYNADFDGDEMNMH    
 23 O96452/201-827  99.3%  65.8%     --------------VVERHMLNGDLVLFNRQPSLHKMSMMAHKVKVMDG------LTFRLNLSATAPYNADFDGDEMNLH    
 24 Q17085/158-807 100.0%  67.1%     --------------KVERHIRDGDLVIFNRQPTLHKMSMMGHRVRVLPW------STFRMNLSCTTPYNADFDGDEMNLH    
 25 Q25151/153-802 100.0%  64.5%     --------------RVERHMQDNDYVIFNRQPTLHKMSMMCHRVKILPW------STFRLNLSVTTPYNADFDGDEMNLH    
 26 AAK00310/218-8 100.0%  62.8%     --------------KVIRHLLDGDYVIFNRQPSLHKMSIMGHRVKVMRY------SSFRLNLSCTSPYNADFDGDEMNLH    
 27 RPA1_THEAC/207 100.0%  48.7%     --------------TVERQLMEGDIVLFNRQPSLHRMSMMGHTVRILPG------QTFRFNLAVCTPYNADFDGDEMNLH    
 28 Q27095/244-890 100.0%  54.4%     --------------IVERHLRDDDIVIFNRQPSLHKMSMMGHRALIMSG------RTFRLNPCDTTPYNADFDGDEMNLH    
 29 Q20090/240-885  98.7%  65.5%     --------------RVERHMKDGDIIVFNRQPTLHKMSMMGHRVKILPW------STFRMNLSVTSPYNADFDGDEMNLH    
 30 O09451/140-784  99.7%  65.6%     --------------KVIRHIRDGDYVLFNRQPSLHKMSIMGHRIRVLPY------STFRLNLSVTSPYNADFDGDEMNLH    
 31 AAK00309/141-7  99.7%  65.2%     --------------KVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVLPY------STFRLNLSVTSPYNADFDGDEMNLH    
 32 O04142/158-802 100.0%  69.1%     --------------KVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPY------STFRLNLSVTSPYNADFDGDEMNLH    
 33 RPB2_TRYBB/242  98.7%  53.3%     --------------VVERHVINGDVVLFNRQPTLHRMSMMGHRVRVLNY------STFRLNLSCTTPYNADFDGDEMNLH    
 34 Q9YAU1/216-866 100.0%  49.8%     --------------VVERHLINGDIVLFNRQPSLHRMSIMGHIVRVMPG------KTFRLNLLVCPPYNADFDGDEMNLH    
 35 RPC1_TRYBB/256  98.4%  41.4%     --------------IVERHVMNGDLVLFNRQPSLHRVSMMAHRARVLPF------RTFRFNECCCAPYNADFDGDEMNVH    
 36 RPA1_MOUSE/302  99.3%  28.0%     ------APKPQGTKVVCRHVKNGDILLLNRQPTLHRPSIQAHRARILPEE-----KVLRLHYANCKAYNADFDGDEMNAH    
 37 4995/358-1067   99.3%  30.4%     ----------NTNKKVYRHVRNGDMLILNRQPTLHKPSMMAHKARILPGE-----KTIRMHYANCNSYNADFDGDEMNMH    
 38 O77375/266-102  99.7%  60.9%     --------------KVERHMTDEDYILFNRQPSLHKMSIMGHKAKILPY------STFRLNLSVTSPYNADFDGDEMNLH    
 39 AAK00311/165-8 100.0%  60.2%     --------------IVERHLQDNDVIIFNRQPTLHKMSMMGHRVKVLPW------STFRMNLSVTSPYNADFDGDEMNLH    
 40 AAK00313/133-7 100.0%  63.2%     --------------KVERHLRDNDYVIFNRQPSLHKMSLMGHRVKVLPF------STFRLNLSVTTPYNADFDGDEMNMH    
 41 O61119/163-757 100.0%  77.0%     --------------KVERHINDGDVVIFNRQPSLHKMSMMGHRIKVMPY------STFRLNLSVTSPYNADFDGDEMNLH    
 42 13310932/218-8  98.7%  52.6%     --------------VVERHVIDGDVVLFNRQPTLHRMSMMGHRVRVLNY------NTFRLNLSCTTPYNADFDGDEMNLH    
 43 O17628/351-105  99.7%  29.8%     --------NLRQTPKVLRHMKNGDMIMMNRQPSLHKPSILGHRARVLTGQ-----RALRMNYAPCKAYNADFDGDEMNGH    
 44 RPA1_HUMAN/295  99.3%  28.3%     ------APKPQGTKIVCRHVKNGDILLLNRQPTLHRPSIQAHRARILPEE-----KVLRLHYANCKAYNADFDGDEMNAH    
 45 RPA1_DROME/293  98.7%  32.2%     ---------KDGIKIVHRHVLNGDVLLLNRQPSLHKPSIMGHKARILHGE-----KTFRLHYSNCKAYNADFDGDEMNAH    
 46 RPA1_YEAST/353  99.7%  34.2%     ------VSTHTLNKKVYRHIKNRDVVLMNRQPTLHKASMMGHKVRVLPNE-----KTLRLHYANTGAYNADFDGDEMNMH    
 47 AAK15346/218-8  98.7%  52.3%     --------------VVERHVIDGDVVLFNRQPTLHRMSMMGHRVRVLNY------NTFRLNLSCTTPYNADFDGDEMNLH    
 48 G69698/224-835  90.8%  31.2%     --------------DVLESVIKEHPVLLNRAPTLHRLGIQAFEPTLVEG------RAIRLHPLVCTAYNADFDGDQMAVH    
 49 CAC33868/123-8  99.3%  65.5%     --------------VVERHMTAGDVVLFNRQPSLHKMSMMAHRARVMKG------KTFRLNLSVTSPYNADFDGDEMNLH    
 50 O77165/146-800  98.0%  57.2%     --------------IIERHLMDGDHVVFNRQPSLHKMSMMGHQVRVLPY------SSFRLNLSVTTPYNADFDGDEMNMH    
 51 Q9HWC9/235-831  90.8%  30.2%     --------------DVLAEVIREHPVLLNRAPTLHRLGIQAFEPVLIEG------KAIQLHPLVCAAYNADFDGDQMAVH    
 52 RPOC_AQUPY/366  90.5%  28.9%     --------------ECLEEVVKQHPVLLNRAPTLHRPSIQAFEPVLVEG------KAIQLHPLVCPPFNADFDGDQMAVH    
 53 12722150/236-8  90.8%  28.9%     --------------DILADVIREHPILLNRAPTLHRLGIQAFEPLLIEG------KAIQLHPLVCAAFNADFDGDQMAVH    
 54 CAC27103/217-8 100.0%  61.2%     --------------CVERHLQNGDLVLFNRQPSLHKMSMMGHIVKVMKF------STFRLNLSATSPYNADFDGDEMNLH    
 55 RPOC_BACHD/224  90.8%  31.2%     --------------DVLEEVIKEHPVLLNRAPTLHRLGIQAFEPTLVEG------RAIKLHPLVCTAYNADFDGDQMAVH    
 56 RPOC_BACAN/224  90.8%  31.5%     --------------DVLESVIKEHPVLLNRAPTLHRLGIQAFEPTLVEG------RAIRLHPLVCTAYNADFDGDQMAVH    
 57 RPOC_ECOLI/235  90.8%  30.2%     --------------DILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEG------KAIQLHPLVCAAYNADFDGDQMAVH    
 58 CAC33863/114-7  99.0%  66.4%     --------------TVERHMVDGDYVLFNRQPSLHKMSMMCHRVRVMEG------KSFRLNLSVTTPYNADFDGDEMNLH    
 59 RPOC_RICPR/235  91.1%  29.0%     --------------DVLEEVIREHPVLLNRAPTLHRLGIQAFEPLLIEG------KAIQLHPLVCAAFNADFDGDQMAVH    
 60 Q9KV29/235-831  90.8%  30.5%     --------------DILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEG------KAIQLHPLVCAAYNADFDGDQMAVH    
 61 Q9KW13/235-831  90.8%  30.8%     --------------DVLDDVIREHPVMLNRAPTLHRLGIQAFEPVLIEG------KAIQLHPLVCAAYNADFDGDQMAVH    
 62 CAC33864/178-8  98.7%  62.7%     --------------VVERHMADNDIVLFNRQPTLHKMSMMAHRARIMKG------KTFRLNLSVTTPYNADFDGDEMNLN    
 63 Q9LVH0/251-907  98.7%  42.7%     --------------IVDRHLQEGDVVLFNRQPSLHRMSIMCHRARIMPW------RTLRFNESVCNPYNADFDGDEMNMH    
 64 RPOC_PSEPU/246  90.8%  28.9%     --------------DVLAEVIREHPVLLNRAPTLHRLGIQAFEPVLIEG------KAIQLHPLVCARYNADFDGDQMAVD    
 65 O25806/1624-21  90.8%  32.8%     --------------ECLQEITEGYPVLLNRAPTLHKQSIQAFHPKLIDG------KAIQLHPLVCSAFNADFDGDQMAVH    
 66 RPOC_LISMU/224  90.8%  31.2%     --------------DVLEEVIREHPVLLNRAPTLHRLGIQAFEPTLVEG------RAIRLHPLVCTAYNADFDGDQMAVH    
 67 RPOC_BORBU/224  90.8%  28.2%     --------------QILDLVIKEHPILLNRAPTLHRLGIQAFEPVLVEG------KAIKLHPLVCHAYNADFDGDQMAVH    
 68 Q9K1J1/237-833  90.8%  28.9%     --------------DILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEG------KAIQLHPLVCAAFNADFDGDQMAVH    
 69 AAK22490/237-8  90.8%  30.2%     --------------DILEEVIREHPVLLNRAPTLHRLGIQAFEPKLIEG------KAIQLHPLVCAAFNADFDGDQMAVH    
 70 RPOC_TREPA/224  90.8%  27.9%     --------------SVLDEVVKEHPVMLNRAPTLHRLGIQAFEPVLVEG------KAIRLHPLVCKPFNADFDGDQMAVH    
 71 CAC33856/129-7  99.0%  63.2%     --------------IVERHMTSEDVVLFNRQPSLHKMSMMAHKPRIMEG------RTFRL-LSVTSPYNADFDGDEMILQ    
 72 7189607/242-83  90.8%  29.5%     --------------DVLEEIIKGHPVLLNRAPTLHRLGIQAFEPVLIEG------KAIRIHPLVCAAFNADFDGDQMAVH    
 73 Q9PA87/258-854  90.8%  30.8%     --------------DILEEVISEHPVVLNRAPTLHRQGIQAFEPVLIEG------KAIQLHPLVCTAFNADFDGDQMAVH    
 74 BAB41732/224-8  90.8%  30.5%     --------------DVLEEVIREHPVLLNRAPTLHRLGIQAFEPTLVEG------RAIRLHPLVTTAYNADFDGDQMAVH    
 75 A45597/244-101  99.3%  32.3%     --------------VVERHICDGDIVLFNRQPSLHRMSIMCHKAKIMDF------KTFRFNECVCSPYNADFDGDEMNLD    
 76 14021284/237-8  90.8%  29.5%     --------------DILDEVIREHPVLLNRAPTLHRLGIQAFEPILIEG------KAIQLHPLVCTAFNADFDGDQMAVH    
 77 RPOC_MYCLE/310  90.8%  28.6%     --------------DVLEEVIAEHPVLLNRAPTLHRLGIQAFEPMLVEG------KAIQLHPLVCEAFNADFDGDQMAVH    
 78 RPOC_THEMA/519  92.8%  29.6%     --------------EVLEEVIKGSVVLLNRAPTLHRMSIQAFEPKLVEG------NAIQLHPVVCPPFNADFDGDQMAVH    
 79 RPOC_CAMJE/257  90.8%  30.5%     --------------ECLEEVVKGHPVMLNRAPTLHKLSIQAFHPVLVEG------KAIQLHPLVCAAFNADFDGDQMAVH    
 80 RPOC_BROTH/224  90.8%  30.8%     --------------DVLEDVIREHPVLLNRAPTLHRLGIQAFEPILVEG------RAIRLHPLVCTAYNADFDGDQMAVH    
 81 12724824/216-8  90.8%  31.8%     --------------DVLETVVKEHPVLLNRAPTLHRLGIQAFEPVLIDG------KAIRLHPLACEAYNADFDGDQMAIH    
 82 Q26793/371-105  98.0%  30.6%     -----------VTLIVYRHILNGDRVIFNRQPTLHKPSMMGYRVKVLSGS-----KTIRFHYVNGNSFNADFDGDEMNVH    
 83 Q9L0K9/310-901  90.8%  28.2%     --------------DVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEG------KAIQIHPLVCTAFNADFDGDQMAVH    
 84 Q89506/216-991  99.7%  28.5%     ---SKKFIKLEEGWIVHRYLQNGDILVLNRQPTLHKASMMALRVKIMDV------KTFKFNLACTKPYNADFDGDEMNAH    
 85 AAK33217/225-8  90.8%  31.2%     --------------DILEEVIKEHPVLLNRAPTLHRLGIQAFEPVLIDG------KALRLHPLVCEAYNADFDGDQMAIH    
 86 RPOC_BUCAI/235  90.8%  29.9%     --------------DILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEG------KAIQLHPLVCAAYNADFDGDQMAVH    
 87 RPOC_MYCGE/297  93.8%  28.8%     --------------GIVYDVIKDRPVLLNRAPTLHRLGIQAFEPRIVDG------KAIRLHPLVTTAFNADFDGDQMAVH    
 88 T10432/224-835  90.8%  29.9%     --------------DVLEDVIKEHPVLLNRAPTLHRLGIQAFEPVLVSG------KAMRLHPLACEAYNADFDGDQMAIH    
 89 RPOC_WEIPA/158  90.8%  30.2%     --------------DVLEDVIKEHPVLLNRAPTLHRLGIQAFEPVLVSG------KAMRLHPLVTEAYNADFDGDQMAIH    
 90 RPOC_OENOE/159  92.1%  31.5%     --------------DVLEEVVKEHPVLLNRAPTLHRLGIQAFEPVLVSG------KAMRLHPLVTTAYNADFDGDQMAIH    
 91 RPO1_ASFB7/194  98.4%  32.2%     --------------ILYRDVVTGDVAFFNRQPSLERSSIGVHRIVVLENPK---ISTFQMNVSACAWYNADFDGDQMNLW    
 92 Q9VXP9/247-780  99.7%  45.9%     --------------VVERHLRDGDIVLFNRQPSLHKMSIMCHRAKVQPQ------RTFRFNECACTPYNADFDGDEMNLH    
 93 RPOC_LEUPS/158  90.8%  30.2%     --------------DVLEDVIKEHPVLLNRAPTLHRLGIQAFEPVLVSG------KAMRLHPLVTEAYNADFDGDQMAIH    
 94 Q83066/153-772  94.1%  30.5%     -------------DTIERFLEDGDPVILNRQPTLHRNSMLGMKIVKKLG------KTIRVNLAVTHGFNMDFDGDEGNLY    
 95 Q9KWU6/510-112  91.1%  27.3%     -----------EVWDALEEVIHGKVVLLNRAPTLHRLGIQAFQPVLVEG------QSIQLHPLVCEAFNADFDGDQMAVH    
 96 Q9SVY0/339-106  96.4%  32.2%     ---GKTCDINFEGKTVHRHMRDGDIVLVNRQPTLHKPSLMAHKVRVLKGE-----KTLRLHYANCSTYNADFDGDEMNVH    
 97 Q9F3X7/244-828  91.1%  28.0%     --------------DILEHVIKGHPVLLNRAPTLHRLGIQAFQPKLIEG------KAIQLHPLACTAFNADFDGDQMAVH    
 98 RPC1_GIALA/304  98.7%  24.3%     --------------IVYRHLLPNDTLLFNRQPSLHRMSIMQFNAVIHEN------RTFSFNPVVCSPFNADFDGDEMNIF    
 99 O21238/230-831  91.4%  22.4%     --------------KLINSIISKHPVLLNRAPTLHRMNIQTFSPLLIYT------KAIQLHPLVCSSFNADFDGDTMAIY    
100 Q9RVW0/527-114  91.1%  26.4%     -----------SVWDALEEVIEDKVVLLNRAPTLHRLGIQAFEPVLVEG------QSIQLHPLVCEAFNADFDGDQMAIH    
101 AAK39916/209-8  98.4%  38.0%     --------------SIQRHLVKNDIILFNRQPSLHRLSIMAHRIRIFKE------KTFRLNHCVCKPYNADFDGDEMNLH    
102 Q9PQV5/293-939  92.1%  28.8%     --------------PVVEKVIKQRPVILNRAPTLHRLGIQAFEPKMVDG------KAIRLHPLVTTAFNADFDGDQMAVH    
103 RPO1_VACCV/188  90.1%  22.4%     --------------WVEVAVQEYTSIIFGRQPSLHRYNVIASSIRATEG------DTIKISPGIANSQNADFDGDEEWMI    
104 Q98246/187-789  90.5%  23.4%     --------------WVETRVREFTSIIFGRQPSLHKYNVISSSVRATSG------DTIKIPPGIANSQNADFDGDEEWMI    
105 O04206/155-765  94.7%  26.6%     --------------VVHRRVMDGDVVFINRPPTTHKHSLQALRVYVHED------NTVKINPLMCSPLSADFDGDCVHLF    
106 Q9QBB0/186-787  90.1%  22.8%     --------------WVEVSLRENSSIIFGRQPSLHRYNVIASTVKYTEG------DTIKIPPGIANSQNADFDGDEEWMI    
107 Q9Q8N2/186-787  90.1%  22.4%     --------------WVEVALKENTSIIFGRQPSLHRYNVIASTVKYTEG------DTIKIPPGIANSQNADFDGDEEWMI    
108 AAK43568/143-7  90.1%  22.8%     --------------WVEVPLKENTSIIFGRQPSLHRYNVIASTVKYIEG------DTIKIPPGIANSQNADFDGDEEWMI    
109 Q9YW50/209-820  91.4%  18.5%     --------------RIEIPLQNYSMILFSRQPSLHKFNIQCAFCLIHKA------QTFSTPTAIANSMNLDYDGDELNIY    
110 Q9QTF4/174-755  92.1%  34.6%     --------------TLHRSLRDGDVVVLNRQPTLHRNSMLGMRVKVLPG------NTIRVNLAVTHGFNMDFDGDEGNLY    
111 Q26008/632-193  92.8%  30.4%     --------------ILHRHARDGDVVIMNRQPTLHKFSIMAHYLKIFEKE-----KVFRLNYVNCSSYNADFDGDEMNLH    
112 AAK28423/204-7  90.8%  27.9%     --------------KILKKICNKKSILLNRAPTLHRMGFQSFKILLSQD------KTIKLHPLVCLSYNADFDGDQMAIH    
113 AAK28421/207-7  90.5%  25.6%     ----------------LNKIIKNHTILLNRAPTLHRMGFQSFEIILTED------KVIKLHPLMCLSYNADFDGDQMAIH    
114 AAK28425/204-7  90.8%  27.6%     --------------NILKLICDKKSILLNRAPTLHRMGIQSFKILLTQD------KTIKLHPLVCLSYNADFDGDQMAIH    
115 Q9J593/186-790  90.1%  21.2%     --------------WVETNIQEFTNIIFGRQPSLHRYNVISSSVRKTEE------DTIKIPPGIANSQNADFDGDEEWTI    
116 CAC27032/308-1  89.5%  25.1%     KLFSLFSKNKYGFNKFLRNLKKNDISILNRQPSLHKTSIMAHKVRILKSS-----KCLKLHYSNCNSYNADFDGDEMNLH    
117 AAK17076/209-7  89.8%  25.1%     ---------------LLKNKVKSYFIMLNRAPTLHRMNFQSFKILLTED------KTIKIHPLVCLSYNADFDGDQMAIH    
118 RPOC_ANASP/242  90.8%  29.2%     --------------DVLEEVIEGHPVMLNRAPTLHRLGIQAFEPILVEG------RAIQLHPLVCPAFNADFDGDQMAVH    
119 Q9EMI5/198-807  90.8%  20.3%     --------------RIEVELEDNDVILFSRQPSLHKFNIQAGICKIWDN------NTIATPTPIANSMNLDYDGDEMNVY    
120 RPOC_GUITH/241  90.8%  29.5%     --------------NVLEEVIQGHPILLNRAPTLHRLGIQAFEPILVEG------RAIKLHPLVCPAFNADFDGDQMAVH    
121 RPOC_PORPU/247  90.8%  30.2%     --------------NVLNEVIQGHPVLLNRAPTLHRLGIQAFEPILVEG------RAIKLHPLVCPAFNADFDGDQMAVH    
122 RPOC_SYNY3/242  90.8%  28.6%     --------------SVLEEVITGHPVMLNRAPTLHRLGIQAFEPILVEG------RAIQLHPLVCPAFNADFDGDQMAVH    
123 O19897/243-633  90.8%  27.9%     --------------ELLQKIIKWHPVLLNRAPTLHRLGIQAFDPVLVDG------RAIRLHPLVCPAFNADFDGDQMAVH    
124 RPOC_MESVI/280  90.8%  27.6%     --------------EILNQVIQGHPVLLNRAPTLHRLGIQAFEPILVEG------RAIQLHPLVCPAFNADFDGDQMAVH    
125 RPOC_CYAPA/246  90.8%  27.3%     --------------DILEEVIQNHPVLLNRAPTLHRLSIQAFEPILVEG------RAIQLHPLVCPAFNADFDGDQMAVH    
126 Q9TL05/385-847  90.8%  27.0%     ---ENPTIIDAVVWDTLAAVVEGYPILLNRAPTLHRLGIQAFEPVLING------RAIQLHPLVCTGFNADFDGDQMGVH    
127 RPOC_ODOSI/461  90.8%  28.9%     --------------PVLEKVLSNHPIFLNRAPTLHRLGIQAFEPILVQG------RAIKLHPLVCSAFNADFDGDQMAVH    
128 RPOC_MARPO/262  91.1%  27.5%     --------------KVLQEVMQGHPILLNRAPTLHRLGIQAFQPILVNG------RAIHLHPLVCGGFNADFDGDQMAVH    
129 RPOC_PINTH/278  90.8%  28.5%     --------------EVLQEVMQGHPILLNRAPTLHKLGIQAFQPILVEG------RAIRLHPSVCGGFNADFDGDQMAVH    
130 BAB33195/264-6  91.4%  27.9%     --------------EILQEVMRGHPILLNRAPTLHRLGIQAFQPILVEG------RAICLHPLVCKGFNADFDGDQMAIH    
131 RPOC_CHLVU/398  89.5%  27.2%     --------------SVLGEILKRHPVLLNRAPTLHRLGIQAFLPRLVEG------KAILLHPLVCPAFNADFDGDQMAVH    
132 RPOC_MAIZE/262  91.1%  27.8%     --------------EILQEVMRGHPVLLNRAPTLHRLGIQAFQPTLVEG------RTICLHPLVCKGFNADFDGDQMAVH    
133 RPOC_SINAL/270  91.4%  28.2%     --------------EILQEVMQGHPVLLNRAPTLHRLGIQSFQPILVEG------RTICLHPLVCKGFNADFDGDQMAVH    
134 Q9MTM4/262-679  91.1%  27.2%     --------------EILQQVMQGHPVLLNRAPTLHRLGIQAFQPFLVKG------DAICLHPLVCKGFNADFDGDQMAVH    
135 CAC24618/217-5  89.8%  26.5%     --------------IILENIIKNHYILLNRAPTLHRLNIQAFQPKLTIG------KSIKLHPLVCSAFNADFDGDQMGVH    
136 RPOC_EUGGR/223  92.1%  28.0%     --------------PVLEKVLNSYFILLNRAPTLHRLGIQSFQPKVTFE------KAILLHPLVCSAFNADFDGDQMGIH    
137 Q9MTD4/224-565  87.5%  20.6%     ------------LKRILKFLITKEIVLLNRAPTLHRMNIQAFKPYLIEF------EGIKLYPVGCSSFNADFDGDQMGLF    
138 RPOC_PLAFA/237  89.1%  19.4%     --------------KFLNRLLQNQFIIINRAPTLHRMNLQSFKPLLTEG------YSLKFYPLGCTSFNADFDGDQMSIF    
    consensus/100%                   ...................h......hhsR.Pohc+.sh......h..........sh.h....s...shDaDGDp..h.    
    consensus/90%                    ...............l.pph.ptc.llhNRtPoLH+.uh.uap.hlh........pshphp..ss.saNADFDGDpMsha    
    consensus/80%                    ...............l.cclhptc.llhNRtPoLH+huh.uapshlh.h......pshplp..ssssaNADFDGDpMslH    
    consensus/70%                    ...............l.cclhctc.llhNRtPoLH+hul.uacshlh.t......csh+Lp.hVsssaNADFDGDpMslH    

                      cov    pid 561          .         .         .         6    ] 605
  1 RPB1_SCHPO/238 100.0% 100.0%     VPQSEETRAEIQEITMVPKQIVSPQSNKPVMGIVQDTLAGVRKFS    
  2 RPB0_ARATH/236 100.0%  66.0%     VPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKIT    
  3 O59227/211-876  99.7%  55.2%     VPQTEEAQAEAKILMEVQNHIISPRYGGPIIGGIQDHISGGYLLT    
  4 RPA1_THECE/211 100.0%  55.1%     VPQTEEAQAEAKILMEVQNHIISPRYGGPLIAGIQDHISGGYLLT    
  5 RPA1_METTH/201  99.7%  53.9%     VFQTEESRAEAKTLMRVQEHILSPRFGGPIIGGIHDHISGAYLLT    
  6 I38186/246-895 100.0%  70.4%     LPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFT    
  7 RPA1_SULAC/205 100.0%  56.9%     VPQSEEAIAEARELMLVHKNIITPRYGGPIIGGGQDYISGAYLLS    
  8 O28391/200-840  99.3%  53.1%     VPQSLEAQAEAKILMAVQEHILSPRFGGPIIGGIHDHISGLYLLT    
  9 RPB1_YEAST/232 100.0%  77.6%     VPQSEETRAELSQLCAVPLQIVSPQSNKPCMGIVQDTLCGIRKLT    
 10 O96446/203-874  99.3%  67.8%     MPQSYNSKAELEELCLVSKQVLSPQSNKPVMGIVQDSLTALRLFT    
 11 AAK40566/205-8 100.0%  57.5%     VPQSEEAIAEAKEIMLVHKNIITPRYGGPIIGAAQDYISGAYLLT    
 12 O00820/160-801 100.0%  71.5%     VPQTPGARAEVIELMMVPKQIVTAQSNKPVIGIVQDTLLGGCLLT    
 13 Q9HGZ5/244-892 100.0%  74.9%     VPQSEESRAELLQLALVPMNIVSPQRNGPLMGIVQDTLCGIYKIC    
 14 RPC1_HUMAN/248  99.7%  46.3%     LPQTEEAKAEALVLMGTKANLVTPRNGEPLIAAIQDFLTGAYLLT    
 15 AAK00312/167-8 100.0%  68.5%     APQSYETRAEIMEIMRVPRQIISPKHNQPVMGIVQDTLCGIRKFT    
 16 Q18566/244-902  99.7%  45.6%     LPQTYEAKAEASELMNVKNNLITPRSGEPLVAAIQDFITGGYLLT    
 17 Q23699/157-806 100.0%  66.8%     LPQSLETKAEISNLALVPRMIITPQANRPVMGIVQDTLTAVRKMT    
 18 RPA1_METVA/208 100.0%  51.4%     VPQSEEARAEAETLMLVEKHIISPRYGGPIIGAIHDFVSGAYVLT    
 19 Q25203/160-809 100.0%  66.4%     LPQSLETRAEIMNLCAVPRMIITPQANRPVMGIVQDTLTAVRKMT    
 20 RPC1_SCHPO/244  99.3%  44.8%     VPQTEEAKTEALELMGIKNNLVSPRNGEPIIAATQDFITAAYLLS    
 21 RPC1_YEAST/254 100.0%  45.2%     VPQTEEARAEAINLMGVKNNLLTPKSGEPIIAATQDFITGSYLIS    
 22 RPA1_HALHA/277 100.0%  52.5%     ALQNEEARAEARVLMRVQEQILSPRFGENIIGAIQDHISGTYLLT    
 23 O96452/201-827  99.3%  65.8%     MPQSYNSKAELSELMLVSKHIISPQSNKPVMGIIQDTLLGVCRLT    
 24 Q17085/158-807 100.0%  67.1%     VAQSLETRAELENIHITPRQIITPQANRPVMGIVQDTLCAVRKMT    
 25 Q25151/153-802 100.0%  64.5%     LAQSLETRAEISQLASVKRMIITPQANRPVMGIVQDSLTAVNKMT    
 26 AAK00310/218-8 100.0%  62.8%     VPQSPQARAEVMQLMMVPRCIVSPQGNKPVMGIVQDTLVGTMLFT    
 27 RPA1_THEAC/207 100.0%  48.7%     VIQKEEARAEARIIMKVQEQIMSPRFGGPIIGGIHDHVTALFLLT    
 28 Q27095/244-890 100.0%  54.4%     VPQSQTARTEVRHIMAVPKQIISPQANKPVIGLVQDALLGCRLLS    
 29 Q20090/240-885  98.7%  65.5%     LPQSLETRAEIEEIAMVPRQLITPQANKPVMGIVQDTLCAVRMMT    
 30 O09451/140-784  99.7%  65.6%     VPQTHQTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFT    
 31 AAK00309/141-7  99.7%  65.2%     VPQSHGTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFT    
 32 O04142/158-802 100.0%  69.1%     VPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFT    
 33 RPB2_TRYBB/242  98.7%  53.3%     VPQSLLTKAELIEMMMVPKNFVSPNKSAPCMGIVQDSLLGSYRLT    
 34 Q9YAU1/216-866 100.0%  49.8%     VPRLEEAQAEAREIMLVEKHILTPRYGGPIIGGRQDYVSGAYLLT    
 35 RPC1_TRYBB/256  98.4%  41.4%     FVQTEKARAEALQLMSTARNIISAKNGEPIIACTQDFLAAAYLVT    
 36 RPA1_MOUSE/302  99.3%  28.0%     FPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMT    
 37 4995/358-1067   99.3%  30.4%     FPQSTNARSEAQFIANTDSQYLVPTSGDPLRGLIQDHVVMGVWLT    
 38 O77375/266-102  99.7%  60.9%     LAQSHETRSEIKHLMIVQRQIVSPQGNKPVMGIVQDSLLAIRKFT    
 39 AAK00311/165-8 100.0%  60.2%     VPQSLGSRAEIEEIMMVHKNILTPQSNRPVMGIIQDTLTVARRMT    
 40 AAK00313/133-7 100.0%  63.2%     VPQSYETMAEIKEIMAVPNQIVSPQSNKPVMGIVQDSLLGVMLFT    
 41 O61119/163-757 100.0%  77.0%     VPQTLETRAEVIEIMMVPRQIVSPQSNRPVMGIVQDTLLGSRLFT    
 42 13310932/218-8  98.7%  52.6%     VPQSLLTKAELIEMMMVPKNFVSPNKSAPCMGIVQDSLLGSYRLT    
 43 O17628/351-105  99.7%  29.8%     LVQSHIAQTEVREIANVGSNFLVPKDATPLLGLIQDHVVSGVLLS    
 44 RPA1_HUMAN/295  99.3%  28.3%     FPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMT    
 45 RPA1_DROME/293  98.7%  32.2%     YPQSEVARAEAYNLVNVASNYLVPKDGTPLGGLIQDHVISGVKLS    
 46 RPA1_YEAST/353  99.7%  34.2%     FPQNENARAEALNLANTDSQYLTPTSGSPVRGLIQDHISAGVWLT    
 47 AAK15346/218-8  98.7%  52.3%     VPQSLLTKAELIEMMMVPKNFVSPNKSAPCMGIVQDSLLGSYRLT    
 48 G69698/224-835  90.8%  31.2%     VPLSAEAQAEARILMLAAQNILNPKDGKPVVTPSQDMVLGNYYLT    
 49 CAC33868/123-8  99.3%  65.5%     MPQNHNTRAELENICGVDRNVLSCQGNKPVMGIVQDSLVGVRKMT    
 50 O77165/146-800  98.0%  57.2%     VPNSLEAISEVKNLMAVPFQIVTPQKNSPCMGVVQDSLLGCSLIS    
 51 Q9HWC9/235-831  90.8%  30.2%     VPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVMGLYYMT    
 52 RPOC_AQUPY/366  90.5%  28.9%     VPLGIEAQLESYILMLSTQNILSPAHGKPLTMPSQDMVLGTYYMT    
 53 12722150/236-8  90.8%  28.9%     VPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMT    
 54 CAC27103/217-8 100.0%  61.2%     FPQNVESKSELKNLLMVSNCIVSPQGNKPIMGIVQDSLLGSMLIT    
 55 RPOC_BACHD/224  90.8%  31.2%     VPLSAEAQAEARILMLAAQNILNPKDGKPVVTPSQDMVLGNYYLT    
 56 RPOC_BACAN/224  90.8%  31.5%     VPLSSEAQAEARLLMLAAQNILNPKDGKPVVTPSQDMVLGNYYLT    
 57 RPOC_ECOLI/235  90.8%  30.2%     VPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMT    
 58 CAC33863/114-7  99.0%  66.4%     MPQSYITAVELRRLTHVPLHILSPQSNKPIMGIVQDTLVGVYIMS    
 59 RPOC_RICPR/235  91.1%  29.0%     IPLSIEAQLEARVFMMSTNNILSPANGRPIIVPDKDIVLGLYYLT    
 60 Q9KV29/235-831  90.8%  30.5%     VPLTLEAQLEARTLMMSTNNILSPASGDPIIVPSQDVVLGLYYMT    
 61 Q9KW13/235-831  90.8%  30.8%     VPLTLEAQLEARSLMMSTNNILSPANGEPVITPSQDVVLGLYYAS    
 62 CAC33864/178-8  98.7%  62.7%     MPQSFNTRAELENLCIVAKNVVSCQGNKPVMGIVQDSLVGVRKMT    
 63 Q9LVH0/251-907  98.7%  42.7%     VPQTEEARTEAITLMGVQNNLCTPKNGEILVASTQDFLTSSFLIT    
 64 RPOC_PSEPU/246  90.8%  28.9%     VPLTLEAQLENGALMMSTNNILSPANGEPIIVPSQDVVLGLYYMT    
 65 O25806/1624-21  90.8%  32.8%     VPLSQEAIAECKVLMLSSMNILLPASGKAVAIPSQDMVLGLYYLS    
 66 RPOC_LISMU/224  90.8%  31.2%     VPLSAEAQAEARLLMLAAQNILNPKDGKPVVTPSQDMVLGNYYLT    
 67 RPOC_BORBU/224  90.8%  28.2%     VPLTPAAQAESWALMLSTNNLLNPANGHPIVFPSQDIVLGLYYLT    
 68 Q9K1J1/237-833  90.8%  28.9%     VPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMT    
 69 AAK22490/237-8  90.8%  30.2%     VPLSLEAQLEARVLMMSTNNILSPANGRPIIVPSQDIVLGLYYLS    
 70 RPOC_TREPA/224  90.8%  27.9%     VPLTQAAQMECWTLMLSNRNLLDPANGRTIVYPSQDMVLGLYYLT    
 71 CAC33856/129-7  99.0%  63.2%     HATEYNTRAEWEYLVKVKHNVISCQGNKPVMGIVQDSLVGVRIMT    
 72 7189607/242-83  90.8%  29.5%     VPLSVEAQLEAKVLMMAPDNIFLPSSGKPVAIPSKDMTLGLYYLM    
 73 Q9PA87/258-854  90.8%  30.8%     VPLSLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMS    
 74 BAB41732/224-8  90.8%  30.5%     VPLSKEAQAEARMLMLAAQNILNPKDGKPVVTPSQDMVLGNYYLT    
 75 A45597/244-101  99.3%  32.3%     VPQTEEARAEALYLMNVKHNLITPKNGEVIIALTQDFLSASYIIT    
 76 14021284/237-8  90.8%  29.5%     VPLSLEAQLEARVLMMSTNNILHPASGAPIIVPSQDMVLGLYYLS    
 77 RPOC_MYCLE/310  90.8%  28.6%     LPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLT    
 78 RPOC_THEMA/519  92.8%  29.6%     VPLSAAAQAEARFLMLSRYNIISPAHGKPISLPTQDIIIGSYYLT    
 79 RPOC_CAMJE/257  90.8%  30.5%     VPLSQEAIAECKVLMLSSMNILLPASGKSVTVPSQDMVLGIYYLS    
 80 RPOC_BROTH/224  90.8%  30.8%     VPLSPEAQAEARILMLAANHILNPKDGKPVVTPSQDMVLGNYYLT    
 81 12724824/216-8  90.8%  31.8%     LPLSEEAQAEARLLMLAAEHILNPKDGKPVVTPSQDMVLGNYYLT    
 82 Q26793/371-105  98.0%  30.6%     VPQSIETRAEVETLMDANINYLVPTSGRPIRGLIQDHVAAGVLVT    
 83 Q9L0K9/310-901  90.8%  28.2%     LPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLT    
 84 Q89506/216-991  99.7%  28.5%     APQSEESKAELFTLSTPKQCIMSCQSGKPNLTIVQDSLTGAYLMS    
 85 AAK33217/225-8  90.8%  31.2%     VPLSEEAQAEARLLMLAAEHILNPKDGKPVVTPSQDMVLGNYYLT    
 86 RPOC_BUCAI/235  90.8%  29.9%     VPLTLESQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMT    
 87 RPOC_MYCGE/297  93.8%  28.8%     VPLSENAVNEARAVLLASKHILGLKDGRPIVTPTQDMVLGNYYLT    
 88 T10432/224-835  90.8%  29.9%     VPLSNEAQAEARLLMLAAHHILAPKDGKPVVTPSQDMVIGNYWLT    
 89 RPOC_WEIPA/158  90.8%  30.2%     VPLSDEAQAEARLLMLAAGHILAPKDGKPIVAPSQDMVIGNYYLT    
 90 RPOC_OENOE/159  92.1%  31.5%     VPLSDEAQAEARLLMLAASHILAPKDGKPIVAPSQDMTIGNYYLT    
 91 RPO1_ASFB7/194  98.4%  32.2%     VPWSVMSRVEAELLCSVRNWFISTKSSGPVNGQVQDSTVGSFLLT    
 92 Q9VXP9/247-780  99.7%  45.9%     LPQTEEARAEALILMGNQSNLVTPKNGEILIAATQDFITGGYLLT    
 93 RPOC_LEUPS/158  90.8%  30.2%     VPLSDEAQAEARLLMLAAGHILAPKDGKPIVAPSQDMVIGNYYLT    
 94 Q83066/153-772  94.1%  30.5%     LPQSEEARFEVAELMNPKKLIISNKYPQAEIFPVQDAVLGAYLMT    
 95 Q9KWU6/510-112  91.1%  27.3%     VPLSSFAQAEARIQMLSAHNLLSPASGEPLAKPSRDIILGLYYIT    
 96 Q9SVY0/339-106  96.4%  32.2%     FPQDEISRAEAYNIVNANNQYARPSNGEPLRALIQDHIVSSVLLT    
 97 Q9F3X7/244-828  91.1%  28.0%     LPLSNEAILEAQMLMLASHNILNPANGAPITVPSQDMVLGLYYIT    
 98 RPC1_GIALA/304  98.7%  24.3%     YMQGQEARAEAGILMGSHENIISPRHGECMIGLTQDFLTGIYLLS    
 99 O21238/230-831  91.4%  22.4%     IPHTLRSQIESRVLMMSSTNIISPSTQEPIISPTQDIVFGLYYAT    
100 Q9RVW0/527-114  91.1%  26.4%     VPLSAQAQAEARIQMLASHNLLSPANGEPNVKPSRDIILGIFTLT    
101 AAK39916/209-8  98.4%  38.0%     VPQSETSRTEAITLLNSYNNFYTPRNGEILIACSQDFLSYSFILT    
102 Q9PQV5/293-939  92.1%  28.8%     IPLSKEAVAEARSILLASWHILGPKDGKPIITPTQDMILGIYYLT    
103 RPO1_VACCV/188  90.1%  22.4%     LEQNPKAVIEQSILMYPTTLLKHDIHGAPVYGSIQDEIVAAYSLF    
104 Q98246/187-789  90.5%  23.4%     LEQNPKSVLEQSILMYPATLLKHDVHGMPVYGAIQDEILAAYALF    
105 O04206/155-765  94.7%  26.6%     YPQSLSAKAEVMELFSVEKQLLSSHTGQLILQMGSDSLLSLRVML    
106 Q9QBB0/186-787  90.1%  22.8%     LEQNPKAIIEQSILMYPTTLLKHDIHGAPVYGSIQDEIVAAYSLF    
107 Q9Q8N2/186-787  90.1%  22.4%     LEQNPKAVIEQSILMYPTTLLKHDIHGAPVYGSIQDEIVAAYSLF    
108 AAK43568/143-7  90.1%  22.8%     LEQNPKAVIEQSILMYPTTLLKHDVNGSPVYGSIQDEIVAAYSLF    
109 Q9YW50/209-820  91.4%  18.5%     KPKSPSS-IEACFLMLSSAILKNNYNFSPAFGLIQDQLIAIHMLY    
110 Q9QTF4/174-755  92.1%  34.6%     LPRSLSARAEVATLMSPYTNILSDCSKGVEVLLVQDTVLALYMMS    
111 Q26008/632-193  92.8%  30.4%     LLQTPLARAEATHLMNCDFLFTSFKDGSPLRGLAQDFILGGLHLT    
112 AAK28423/204-7  90.8%  27.9%     LPLTINSQIESNYLLLSINNIISPSNGGPIIIPTQDIVMGIYCLT    
113 AAK28421/207-7  90.5%  25.6%     LPLTVNSQLESKFLLLSINNIISPSNGEFIIIPSQDIIMGIYYLT    
114 AAK28425/204-7  90.8%  27.6%     LLLTINSQLESNYILLSINNIISPSNGEPIIVPTQDIVMGIYCLT    
115 Q9J593/186-790  90.1%  21.2%     VEQNPKSVIEQSILMYPTTLLKHDVHGMPVYGSIQDEILAAYNLF    
116 CAC27032/308-1  89.5%  25.1%     IPQNYLSISESLYIAYVTNQNTIPSNGLPLRGLIQDQIISGVLLT    
117 AAK17076/209-7  89.8%  25.1%     LPLTNNAKVESNYLLLSINNIISPSNGNAIIIPTQDIIMGIYYFT    
118 RPOC_ANASP/242  90.8%  29.2%     VPLSLESQAEARLLMLASNNILSPATGRPIITPSQDMVLGAYYLT    
119 Q9EMI5/198-807  90.8%  20.3%     KLKSSVS-VESLFTMLSVNMIKNNYNFSPIFGLIQDQIISVHMIY    
120 RPOC_GUITH/241  90.8%  29.5%     IPLSLEAQAEARMLMLAPYNFLSPATGDPIIMPSQDMVLGCYYLT    
121 RPOC_PORPU/247  90.8%  30.2%     VPLSLEAQAEARLLMLAPHNFLSPATGQPIIMPSQDMVLGCYYLT    
122 RPOC_SYNY3/242  90.8%  28.6%     VPLSLEAQCEARLLMLACHNVLSPATGKPIVAPSQDMVLGCYYLT    
123 O19897/243-633  90.8%  27.9%     IPLSIEAQTEARLLMLAPNNFLSPATGQPIITPSQDMVLGCYYLT    
124 RPOC_MESVI/280  90.8%  27.6%     IPLSLEAQTEARLLMLASSNLLSPATGLPIISPSQDMVLGCYYLT    
125 RPOC_CYAPA/246  90.8%  27.3%     VPLSLEAQTEARLLMLASNNLLSPATGQPIVTPSQDMVLGCYYLT    
126 Q9TL05/385-847  90.8%  27.0%     IPLSAEARAEAKLLMLASHNLLSPATGQPIVVPSQDMVLGWYYLT    
127 RPOC_ODOSI/461  90.8%  28.9%     IPLSLESQSECYMLMLAPYNFLSPANGEPIILPSQDMVLGCYYLT    
128 RPOC_MARPO/262  91.1%  27.5%     IPLSLEAQAEARLLMLSHKNLLSPATGEPISVPSQDMLLGLYILT    
129 RPOC_PINTH/278  90.8%  28.5%     VPLSLEARAEARLLMFSETNLLSPAIGDPISIPTQDMLLGLYIST    
130 BAB33195/264-6  91.4%  27.9%     VPLSLEAQAEARLLMFSHTNLLSPAIGDPIAVPTQDMLIGLYILT    
131 RPOC_CHLVU/398  89.5%  27.2%     VPLSAKTRAEALSLLWSRNQLLAPSSGQPQHLPTQDMVLGFYYLT    
132 RPOC_MAIZE/262  91.1%  27.8%     LPLSLEAQAEARLLMFSHMNLLSPAIGDPICVPTQDMLIGLYVLT    
133 RPOC_SINAL/270  91.4%  28.2%     VPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLT    
134 Q9MTM4/262-679  91.1%  27.2%     VPLSLEAQTEARLLMFSHMNLLSPAMGDPISVPTQDMLIGLYILT    
135 CAC24618/217-5  89.8%  26.5%     IPLSLKAQAEARNILISINNCNSLKNGDPNILPSQDIILGCYFSN    
136 RPOC_EUGGR/223  92.1%  28.0%     IPLSLKSLAEARSMLISINNCVLPANGLPSILPSQDMVLGCYYVT    
137 Q9MTD4/224-565  87.5%  20.6%     LILSKIAKQEAKKLMAFDKNIFSPTYLRNMFKLSQSIILGISTLL    
138 RPOC_PLAFA/237  89.1%  19.4%     LPLIKTSKFESNINLNFDKNIISPSNNKNLFSNLQYYKLGINTLL    
    consensus/100%                   h.....s..E...........................h.......    
    consensus/90%                    h..s..s.hE...lh.s...hhtst.stshhh..QD.lhu.hhhs    
    consensus/80%                    lP.o.puphEh..lhhs.ppllsPttspPlhs..QDhlhuhhhho    
    consensus/70%                    lP.o.pupsEsp.LMhstpplloPtsGpPlhs.sQDhlhGhahlT