Family alignment for the Ribosomal_S13_N domain, displayed in

                                                        cov    pid  1 [        .         .         .         .         :         .         .   ] 74
 1 88036.EFJ28020_from_1_to_60                       100.0% 100.0%    MGRMH--TPGK--GISSSALPYKRT--APSWLK--TSSQEVEEQIC----KLAKKGLTPSQIGVILRDS--HGI   
 2 67593.Physo108227_from_1_to_60                    100.0%  76.7%    MGRMH--SRGK--GMSKSARPYKRS--PPSWLK--VSAEDVEDHIC----KFAKKGLTPSQIGVILRDS--HGI   
 3 486041.XP_001885801.1_from_1_to_60                100.0%  76.7%    MGRMH--APGK--GISSSALPYRRA--PPSWLK--TTPEDVVDHIV----KLARKGLTPSQIGVTLRDS--HGI   
 4 5141.EFNCRP00000002377_from_1_to_60               100.0%  76.7%    MGRMH--SKGK--GISASAIPYSRN--PPSWLK--TTPEQVVDQIC----KLAKKGATPSQIGVILRDS--HGI   
 5 400682.PAC_15717094_from_1_to_60                  100.0%  76.7%    MGRMH--TPGK--GISKSSLPYRRS--VPTWLK--LSPEEVKEQIY----KLAKKGMTPSQIGVVLRDS--FGI   
 6 4641.GSMUA_AchrUn_randomP06950_001_from_1_to_60   100.0%  78.3%    MGRMH--SRGK--GISSSALPYKRT--PPSWLK--ISAADVEDNIC----KFARKGLSPSQIGVVLRDS--HGI   
 7 70448.Q01GC1_from_1_to_60                         100.0%  76.7%    MGRMH--TPGK--GMSGSALPYKRS--APSWLK--ITPTEVTELIT----KMAKKGMTPSQIGVVLRDN--HGI   
 8 573826.XP_002420858.1_from_1_to_60                100.0%  76.7%    MGRMH--SSGK--GISSSALPYSRN--APSWFK--LSSDDVVEQII----KYARKGLTPSQIGVILRDA--HGV   
 9 214684.XP_570220.1_from_1_to_60                   100.0%  68.3%    MGRMH--SKGK--GMSASALPYRRS--QPSWSK--ATPEEVCDQIF----KLARRGLSPSQIGVILRDS--QGI   
10 3055.EDP05683_from_1_to_60                        100.0%  66.7%    MGRMH--SKGK--GKASSAIPYKRS--PPSWCK--TTGAEVQEMIC----KFARKGMTPSQIGIVLRDQ--HGV   
11 7244.FBpp0237649_from_1_to_60                     100.0%  75.0%    MGRMH--APGK--GISQSALPYRRT--VPSWLK--LNAEDVKEQIK----KLGKKGLTPSKIGIILRDS--HGV   
12 425265.XP_001732505.1_from_1_to_60                100.0%  75.0%    MGRMH--SKGK--GISKSALPYSRT--PPSWLK--TSPEEVVQQIV----KLARKGVTPSQIGSQLRDS--QGI   
13 573063.Metin_1275_from_1_to_60                     98.3%  45.9%    MARMH--ARKR--GRSGSTKPYRTE--PPKWVSY--TPEQVEELVV----ELAKKGYQSAQIGLILRDN--YGI   
14 281687.CJA02893_from_1_to_60                      100.0%  66.7%    MGRMH--NPGK--GMAKSAIPYRRS--VPTWQK--LTAEEVQDQIV----KMAKKGLRPSQIGVILRDS--HGV   
15 7029.ACYPI008671-PA_from_1_to_60                  100.0%  75.0%    MGRMH--TPGK--GISKSALPYRRS--VATWLK--ASSEDVKDHIF----KLAKKGLTPSKIGVILRDS--HGV   
16 4558.Sb07g001670.1_from_1_to_60                   100.0%  76.7%    MGRMH--SRGK--GISSSALPYKRT--PPTWLK--TAATEVEEMIT----KAAKKGQMPSQIGVLLRDQ--HGI   
17 5762.XP_002675233.1_from_1_to_60                  100.0%  63.3%    MGRMH--GAGN--GKSQSVIPYRRS--PPTWLK--VTAEEVEDKIV----KLARKGYTPSQIGAILRDS--DGI   
18 402676.XP_002172385.1_from_1_to_60                100.0%  70.0%    MGRMH--SKGK--GISSSALPYVRS--PPSWCK--ADAEAVVEQII----KFSKKGMSPSQIGVTLRDS--HGI   
19 423536.XP_002784352.1_from_1_to_60                100.0%  68.3%    MGRMY--GRGK--GISSSALPYRRR--TPGWVK--MTPEDCAENIC----KLAKKGLTPSQIGVTLRDS--FGV   
20 208348.PTTG_04426P0_from_1_to_60                  100.0%  75.0%    MGRMH--NPHK--GIAGSALPYKRT--PARWLK--VTPQEVSEQIF----KLARKGMTPSQIGVVLRDS--HGI   
21 45157.CME054CT_from_1_to_60                       100.0%  66.7%    MGRLH--SKGK--GISSSAIPYRRA--APSWCK--TSRKECVDLIV----RLARKGMTPSQIGVQLRDQ--HGV   
22 5833.PF13_0316_from_1_to_60                       100.0%  68.3%    MGRMY--GKGK--GISSSTLPYKRK--QPSWLK--QKPSEIEDAII----KLAKKGQTPSQIGATLRDN--YGI   
23 572307.XP_003883878.1_from_1_to_60                100.0%  66.7%    MGRMY--GPGK--GMSASALPWRRK--PPTWLK--IKPSDVEEHIV----KLAKKGQTPSQIGVTLRDS--FGV   
24 162425.CADANIAP00007464_from_1_to_60              100.0%  63.3%    MGRLH--SKGK--GIASSALPYSRT--PAPWVK--ITPEQVVDHIC----KLARKGASPSQIGVVLRDS--HGV   
25 5786.XP_003285466.1_from_1_to_60                  100.0%  68.3%    MGRMH--SNGK--GISGSALPYNRK--PHSWTK--PTSTEVCETVC----KLAKRGYTPSRIGATLRDS--HGI   
26 572546.Arcpr_1076_from_1_to_60                     98.3%  42.6%    MARMH--ARRR--GKSGSKRVYRDH--PPEWVEM--KPEEVEKLVV----DLYKEGYEPSMIGMILRDR--YGI   
27 190192.MK1593_from_1_to_60                         98.3%  44.3%    MARMH--SRDR--GKSGSTRPPRVA--PPSWVEY--SPEEVESLVV----DLAKQGYEPAMIGIKLRDE--YGI   
28 353151.XP_667429.1_from_1_to_60                   100.0%  66.7%    MGRVY--GRGK--GISSSAKPYRRR--PPTWIK--LKPSEAEDLIT----KLARKGLTPSQIGVTLRDS--HGI   
29 391623.TERMP_00896_from_1_to_60                    98.3%  39.3%    MARIH--ARKR--GKSGSKRPPRTA--PPTWVEY--TAEEVENLVI----KLRKEGYSTAMIGTILRDQ--YGI   
30 39947.LOC_Os07g38540.1_from_1_to_60               100.0%  65.0%    MGRMH--SSGK--GMSCSVLPYRRA--APAWVK--TSASEVEEMIV----RVAKKGQLPSQIGAILRDA--HAV   
31 184922.XP_001707558.1_from_1_to_60                100.0%  61.7%    MGRMH--SKGK--GISRSAIPYTRA--PAPWNK--YTPEDVCEQIC----KLAKKGTPPSRIGLILRDQ--FAI   
32 880724.Metig_0392_from_1_to_60                     98.3%  42.6%    MARLH--SDRR--GSSGSKRPLRKE--VPEWVTL--KPEEVEELVV----KLAKEGYQSAMIGMILRDT--YGI   
33 39416.CAZ85690_from_1_to_60                       100.0%  66.7%    MGRLH--SNGK--GISASAIPYSRT--RPTWLK--TTAEQVEDMIC----KRAKKGDKPSEIGVYLRDQ--HGI   
34 10116.ENSRNOP00000067470_from_1_to_64             100.0%  68.8%    MGHMH--APSK--GLSQSALPYRRS--VPTWLK--LTSDDVKEQIYKLAKKLAKKGLTPSQIGVILRDS--HGV   
35 431895.XP_001742237.1_from_1_to_62                100.0%  69.4%    MGRMH--TPGK--GISRSAAPYVRT--APAWLKNLYGSDDVKELIY----NLARKGMTPSKIGVVLRDS--RGI   
36 15368.BRADI1G23960.1_from_1_to_60                 100.0%  65.0%    MGRMH--SHGK--GMSSSVLPYKRE--APAWVK--IAAPDVEEMIV----RAAKKGHLPSQIGAVLRDA--HGI   
37 368407.Memar_0430_from_1_to_60                     98.3%  39.3%    MARMY--ARRR--GTSSSVRPYRKE--APEWSNT--DATEIEKIVV----DLRKDGMSTSQIGLVLRDR--YAV   
38 436308.Nmar_1508_from_1_to_60                      98.3%  54.1%    MGRMH--THRH--GKSHSIRPATLR--APSWITQ--SPAEIEELVI----KYSKDGLTPSQIGIKLRDQ--HSI   
39 456442.Mboo_2235_from_1_to_60                      98.3%  39.3%    MARMH--ARRR--GKSSSVRPARNE--APAWSNT--DKAAIEKLIV----DLRKEGTSASMIGLVLRDR--YGV   
40 5691.AAQ16048_from_1_to_60                        100.0%  63.3%    MVRMH--GNGH--GKAASALPYRRT--PPTWLK--SSSRDVIDAVC----KLAKKGLSPSRIGMQLRDS--MGI   
41 644295.Metev_0205_from_1_to_60                     98.3%  41.0%    MAKMH--TRRK--GQSGSTRPMRNE--VPEWSPL--DVNEIEQKVI----ELWKNGYSSSEIGMILRDI--HGV   
42 333668.XP_766022.1_from_1_to_60                   100.0%  73.3%    MGRMY--GKGK--GISSSSIPYGRK--PPSWLK--TKPFEVEEQIA----KLAKKGQTPSQIGVSLRDS--MAI   
43 412133.XP_001318594.1_from_1_to_60                100.0%  56.7%    MGRLH--SQGK--GISSSTCPYRRS--APHWLQ--LSAENCVQMIC----DYAKKGVRPSQIGALLRDR--NGV   
44 188937.MA0949_from_1_to_60                         98.3%  39.3%    MAKMH--TKRK--GKSSSTRPIRTD--PPEWCKI--GADEVTTIVL----DLWKQGVSTAEIGMVLRDR--YGV   
45 4555.Si031390m_from_1_to_60                       100.0%  61.7%    MGRMY--GPGK--GMSSSVLPYARS--APGWVR--SSAAEVEDMIV----RAAKKGQQPSQIGTLLRDA--HGV   
46 679926.Mpet_2006_from_1_to_60                      98.3%  36.1%    MARMH--ARRR--GKSGSVRPLRTE--APEWSNK--DPSEIEKTII----DLRKEGMSSAGIGLVMRDK--YGV   
47 410358.Mlab_0290_from_1_to_60                      98.3%  45.9%    MARMH--ARRR--GIASSVRPYRKE--VPAWSNS--DVKEIEGKIV----ELRKAGLTCAQIGLVLRDK--HGV   
48 679901.Mzhil_1410_from_1_to_60                     98.3%  39.3%    MAKMH--TRKK--GKSMATRPYRTE--APAWSLT--DKDEITKIIM----DLWNQGYSTSKIGMILRDK--YGV   
49 384616.Pisl_0780_from_1_to_60                      98.3%  42.6%    MPHRS--RHKK--GRSRSVRPAHPT--VPTWIQY--TPDEVEQLVV----ELARRGFPPSQIGIILRDQ--YGI   
50 419665.Maeo_0606_from_1_to_60                      98.3%  42.6%    MARLH--SGKR--GSSGSTRPLRTE--VPAWANI--TAEETEEVIV----KMAKEGKQSAMIGLILRDS--YGI   
51 323259.Mhun_2511_from_1_to_60                      98.3%  36.1%    MARMH--ARRR--GISRSVRPYRTQ--APEWSNT--DKEAIIKQIV----DLRRQGSSTAEIGLVMRDK--YGV   
52 5759.rna_EHI_035460-1_from_1_to_60                100.0%  65.0%    MGRMY--NPGR--GISRRCIPYRRS--APSWLK--TSTLEVIDEMC----KLAKKGIAPSQIGAIMRDT--HGV   
53 351160.LRC56_from_1_to_60                          98.3%  42.6%    MAKMH--TRRK--GRSRSTRPVRKT--PPAWFTM--SKEEVEKLVV----KTYGQNATTSQVGIILRDK--YGV   
54 374847.Kcr_1419_from_1_to_60                       98.3%  42.6%    MARLH--SRKR--GKSESKRPPKSF--SLDWVQM--KKEEIEELVI----KLGKRGVPPSQIGMILRDE--YGV   
55 768679.TTX_0719_from_1_to_60                       98.3%  42.6%    MPHRS--RHKR--GRSSSTRPPHAT--APSWIQY--TPEEVEQLVL----ELYRRGFPPSQIGVVLRDQ--YGV   
56 647113.Metok_1155_from_21_to_80                    98.3%  39.3%    MARLH--SGKR--GSSGSKKPLRTE--APKWVNL--TAEEIENKIV----EMAKEGKQSALIGTILRDS--YGV   
57 572478.Vdis_1974_from_1_to_60                      98.3%  41.0%    MPHRS--RHKH--GRSGSTRPVSKV--TPSWVSY--TQEEVEQLVI----ELAKRGFSPSMIGIILRDQ--YGI   
58 267377.MMP1579_from_1_to_60                        98.3%  36.1%    MARLH--SGKR--GSSGSTRPLRTE--VPEWVSM--SAEDIEAKIV----EMAKDGKQSAIIGNILRDM--YGV   
59 263820.PTO0244_from_1_to_60                        98.3%  44.3%    MARMH--TRKR--GRSGSKRIEVRE--RPSWIQY--SDDEIKEMIV----KMRKQGMTKSMIGIRLRDQ--YAI   
60 228908.NEQ487_from_1_to_62                         98.3%  41.3%    MSRLH--AHKRYHGQSGSKRPLRTT--KPEWAPY--DKEFVENKII----ELAKQGYSPAMIGLILRDQ--YGI   
61 5661.XP_003864153.1_from_1_to_60                  100.0%  58.3%    MVRMH--GNGR--GKASSALPYRRT--PPAWLK--IASRNVVKMVC----KSSRKGMMPSQIGMELRDS--MGI   
62 304371.MCP_1742_from_1_to_60                       98.3%  37.7%    MAKMH--TRRK--GRARSVRPIRKT--PPTWLTI--KKDEVEKLVL----SLNAQNVPQAQIGLVLRDK--YGV   
63 259564.Mbur_2345_from_1_to_60                      98.3%  36.1%    MAKMH--TRTK--GKSGSTKPIRSE--SPAWSTA--TTEEITKVVL----DLWKQGNSTSVIGMVLRDN--YGV   
64 412030.XP_001430055.1_from_1_to_62                100.0%  64.5%    MGRMQAKGKGK--GISGSALPYKRK--APKWLT--LSSKSIVDQIV----NLAKKGLNGSQIGVYLRDQ--QGI   
65 439481.Aboo_1376_from_1_to_60                      98.3%  36.1%    MGRIH--ARRK--GKSGSRRPFRTE--KPEWVEM--EKDEIIEKVK----SLSREGYSQAMIGTILRDE--YGV   
66 59689.fgenesh1_pm.C_scaffold_9000081_from_1_to_60 100.0%  68.3%    MGRMY--SGGK--GFSASALLCKGT--SPSWVT--RPPQDVDESIC----KIAKKGLTPSHIGVILRDS--HGI   
67 5911.EAR83923_from_1_to_62                        100.0%  64.5%    MGRMQMKGKGK--GISGSALPFKRR--SPKWLH--MTPSTVVDLSV----KLAKKGLTPSQIGVILRDQ--HGI   
68 521011.Mpal_2661_from_1_to_60                      98.3%  39.3%    MARMH--ARCR--GKSGSVRPHRTE--APVWSTT--DSTEIEKLIV----ELKKNEKSTSEIGLILRDR--YSV   
69 547558.Mmah_1473_from_1_to_60                      98.3%  34.4%    MAKMH--TRRK--GQAGSTKPIRTE--VPAWSLQ--DAEEIEKVVL----DLWKQGNPTCVIGMKLRDN--YGV   
70 490899.DKAM_1338_from_1_to_60                      96.7%  48.4%    MNK----RRDK--GQSHSTRPARAG--PPRWLKLDMSPSDIELLIV----ELAKKGYTPSMIGVILRDQ--YGI   
71 666510.ASAC_1102_from_1_to_58                      95.0%  45.9%    MHK----KSRK--GQSHSTRPAHPR--PPSWLSL--TPDEIETIIE----QLAQKGYTPSQIGLILRDQ--FGV   
72 273057.SSO0408_from_1_to_58                        95.0%  44.3%    MNK----RRAK--GKSHSIRPARAG--APKWVRL--TREEVEMLVE----ELAKRGYTPSMIGIILRDQ--YGI   
73 397948.Cmaq_0598_from_1_to_60                      98.3%  44.3%    MPHRS--RHKR--GSSGSVRPATKT--IPPWLSY--SPEDVERLVV----ELARRGFTPSLIGVILRDQ--YGI   
74 456320.Mvol_1147_from_1_to_60                      98.3%  39.3%    MARLH--SGKR--GSSSSTRPLRTE--VPAWVIL--NAEEVEARII----EMAKEGKQSALIGNIMRDM--YGI   
75 453591.Igni_0860_from_1_to_58                      95.0%  39.3%    MNK----RKEK--GKSHSKRPVRNT--PPRWVPF--GPEEIKALIV----ELSKKGYGPSMIGIILRDQ--FGV   
76 349307.Mthe_0120_from_1_to_60                      98.3%  37.7%    MARMH--SRKK--GSSGSRPPVVDK--LPEWCDV--SKEELEKTIM----TLHERGMSNAMIGLTLRDQ--YGV   
77 415426.Hbut_0431_from_1_to_59                      96.7%  44.3%    MAGK---RRKK--GRSHSTRPATPT--VPKWIQY--DPEEIEEIIV----DLARKGYGPSMIGIILRDQ--FGI   
78 272557.APE_1139_from_1_to_58                       95.0%  44.3%    MNK----RREK--GQSHSTRPPHPQ--PPQWLVF--TPEEIELLIA----ELAKKGYGPSMIGIILRDQ--YGI   
79 333146.Faci_050500006349_from_1_to_59              98.3%  40.0%    MARMH--TRKR--GKSRSTRLVLAE--KPSWMQ---NDDEIKEEIL----KFRKDGLSNSMIGIKLRDQ--YAV   
80 368408.Tpen_0515_from_1_to_58                      95.0%  44.3%    MRK----SKEK--GRSGSTRPPQLK--KPEWVKM--RPEEVEELVV----SLYRKGYPPSMIGVILRDQ--YGI   
81 273075.Ta1131_from_1_to_59                         96.7%  45.9%    MARMH--TRKR--GRSGSKKVYGVQ---PSWIQY--SKDEVINTIV----NLKKSGVPPSVIGIKLRDQ--YGI   
82 990316.MCON_2092_from_1_to_60                      98.3%  41.0%    MAKMH--SRKG--GSSRSRPPMVTK--APEWSDV--SKEELEKTIM----KLHDTGMSPSRIGLTLRDQ--YGV   
83 284813.NP_597236.1_from_1_to_60                    98.3%  39.3%    MAKMH--SSGK--GRSGSVKPYATA--FPTWLTK--SVDEIKSDVI----QMGNKGVPAPDIGTRLRDE--YGI   
84 330779.Saci_0829_from_1_to_58                      95.0%  37.7%    MNK----KRAK--GNSHSIRPVRSG--PPKWVRF--TREEVELLVE----ELAKRGYPPSMIGMVLRDQ--YGV   
85 274854.MG2_1260_from_1_to_60                       98.3%  39.3%    MARMY--KSRK--GKSGSNKPFVSE--APEWSNT--DAKAVTELIL----DLGKAGHSTAEIGTILRDQ--HAV   
86 1006006.Mcup_0062_from_1_to_58                     95.0%  41.0%    MNK----RRAN--GSSHSTRPVRAG--SPKWVRF--SREEVEMLIE----ELAKKGYSPSMIGIALRDQ--YGV   
87 10141.ENSCPOP00000000019_from_1_to_59              98.3%  58.3%    MGRMH--APGK--GLSQSALPYRRS--VPTWLK---LSDDVKRQIY----NWPRRGLTSLTDRVILRDS--HGV   
88 547559.Nmag_2402_from_1_to_59                      96.7%  42.6%    MARMH--TRRR--GSSGSDKPAADE--PPEWSDV--DPADVEERVV----ELADQGHDPSQIGIKLRDE---GV   
89 348780.NP3204A_from_1_to_62                        98.3%  36.5%    MARMH--SRRR--GSSGSDRPTADE--PPEWSEV--DEDAIEDRVV----ELAEEGYDPSQIGLKLRDEGVQGV   
90 273116.TVN1208_from_1_to_59                        96.7%  37.7%    MARMH--TRKR--GKSGSKKVYGVE---PNWVQY--SKDEILNIAV----DLKKSGMTSSVVGIRLRDQ--YGV   
91 583356.Igag_1097_from_1_to_59                      96.7%  39.3%    MAGK---RRDK--GQSESIRPVRIG--PPKWVRY--SVDEIGTLAA----ELARLGYTPSMIGIILRDQ--YGI   
92 39946.BGIOSGA005847-PA_from_41_to_98               96.7%  58.3%    MGD----GRRK--GISSSALPCKRI--PPSLLK--NAASDVEEMIM----KAAKMGQMSSQIGVVLRHQ--HGI   
93 8364.ENSXETP00000055787_from_1_to_62               98.3%  57.1%    MGLGH--RMGL--TLSCSFSPPRELGFTFQWLKL--TSDDVKEQIY----KLAKKGLTPSQIGVILRDS--HGV   
   consensus/100%                                                     M......t.t...s.u.t............h.........h.........p..t.t......t..hRc....ul   
   consensus/90%                                                      Ms+h...t.t+..G.StShhPht.t...PtW.p...p.ppl.p.lh....phh+pG..su.IGhhLRDp..hGl   
   consensus/80%                                                      Mu+ha..stt+..G.StSshPhppp..sPpWhp...ssp-ltp.lh....cht+pGhssu.IGhhLRDp..aGl   
   consensus/70%                                                      MuRhH..spt+..GhStSshPh+pp..sPpWhp...ssc-lpchlh....cLu+cGhssS.IGllLRDp..aGl