cov    pid  1 [        .         .         .         .         :         .         .         . 80 
 1 YDAL_ECOLI      100.0% 100.0%    QASLNLL-RQPVEECRKMVFSFIQQALADGL--------------------RNVLIIHGKGRDDKSHANIVRSYVARWLT    
 2 YFCN_ECOLI       91.8%  17.4%    ELFLDLH-GLTQLQAKQELGALIAACRREH--------------------VFCACVMHGHGKHIL------KQQTPLWLA    
 3 YFCN_BUCAP       91.8%  18.4%    DIFLEFYIGLNQYQARKKLGQLIAICQKEK--------------------MFCAHIMHGYGKNIL------KKQIPFWLS    
 4 YC02_HAEIN       90.6%  17.6%    ELFLDLH-GLTREQAKQELAALLLACENEH--------------------VDCASIMTGYGTFTL------KKQIPRWLV    
 5 MSU2_HELPY/1-78  90.6%  30.6%    SLRLDLR-GQRSEEALDLLDAFLNDALLGG--------------------FEEVLICHGKGSGIL------EKFVKEFLK    
 6 AAF06041.1       88.2%  20.0%    KNTLDLR-GMRAEEAVHQLDMAIS-GRDSG---------------------SILFIIHGMGAGII------KELVLERLR    
 7 MSU2_SYNY3/1-77  90.6%  27.1%    KNTLDCR-GDRLERAESRLEKALNQALDAG----------------------VLWIIHGKGTGKL------RQGVQEYLS    
 8 MUS2_AQUAE       91.8%  30.2%    RDTLNLI-GKDVETAVRELEKFIEEAYSAG--------------------YKVVKVIHGIGSGKL------KSAVREALS    
 9 CAB40814.2/1-79  91.8%  25.6%    KSELDLR-GERYEDALQKVDKYLDEALLAG--------------------YPQVAIIHGKGTGAL------RTGVTEYLK    
10 CAA11403/1-79    91.8%  23.3%    KTELDLR-GYRYEDALIELDQYLDQAVLSN--------------------YEQVYIIHGKGTGAL------QKGVQQHLK    
11 AAD36353.1/1-79  91.8%  25.6%    RTEIDIR-GMTVEEAEPVVKKFIDDLMMNG--------------------ISKGYIIHGKGTGKL------ASGVWEILR    
12 MUS2_BORBU/1-78  90.6%  22.4%    SFTIDIR-GMRSVDALDFLNKKIDNIILNG--------------------INKFEIIHGKGEGHL------MREVHNLLK    
13 Y674_TREPA/1-12  94.1%  27.0%    EARLDLH-GMTCSEARSALDSFFAQARERLL--------------------QKVEIVHGKGHHSK-----GGSVLAPSVK    
14 2558655At/1-141  92.9%   7.4%    EGKLDLH-GMHLSSSYLILLQWMDETRLRFSEEK-------------CVIPAEIVVVSGSGKHSN---VRGESPVKALVK    
15 6165456/24-152   92.9%  16.5%    PDEIDLH-GLYIDEAVQAVQQRIENCIRRGD--------------------NHLHIIVGRGNHSA----NHVEKLRPAIV    
16 2132229/31-160   91.8%  17.2%    SNEIDLH-GLYVKEALFILQKRIKFAIDHNE--------------------PQLNVIVGKGLHSQ----NGIAKLKPSIE    
17 4972714/31-165   91.8%  13.2%    PDLLDLH-YLHTVEAISCLDLFLDRHITVLRNTTR--------------VYKHVFIITGRGLHSA----NGVSTIKNRVK    
18 3201477/32-160   90.6%  12.8%    VVTIDLH-GQHVKPAMKLLKLHLLFGSYVPSI-------------------QTLRVITGCGASGF-----GKSKVKQSVV    
19 3075391/37-176   94.1%   8.8%    ERMIDLH-GLHVSEALQVLKHELSVLRSTARATQER---------------LQIYICVGTGHHTR--GSRTPARLPVAVQ    
20 967093/31-164    91.8%  11.2%    DDYFDMH-GLRKEEAMTMLQFRVQRLRAKPSGT-----------------VTGFELITGAGHHSA----PGKKQLLKAAT    
21 3668150/37-169   90.6%  14.1%    SHSLDLH-GATVREAKTIVRERVAAWWAKEADTSPN-------------SIRPFVIVTGRGNHSI----GLEARLLPAIV    
22 YKJ0_YEAST/1-15  90.6%   8.6%    TYRLDFH-GFLPSEAVSTLKLALNKWWSKEVAERELNSHNINSYGSKVQFVSPLIVVTGRGIHSI----GGISKVRLQVK    
23 860691/1-131     89.4%  14.4%    PWFLDLH-YMSVDGAVKLVKEAIEAVKYHLKAARN--------------LDRRITVVTGSGNNSK-----CGAKIKPQVL    
24 2995584/35-162   91.8%   9.4%    TSTLDLH-GFHSTEVHDVLVRRVRVCQRHRI--------------------GHLRIVTGQGKHSR----HGHQSLYPTVM    
25 2315582_Ce/1-12  89.4%   9.3%    KDYYDLH-GMTTNGAVRFVLGIVENMQFY----------------------GKIKLETGRGNHSK----DNIPVIKNKLL    
26 3875939Ce/1-137  90.6%  11.0%    MLIFDLH-WFTLGGALDFVREIEKALKNCKNKLIEH--------------DEVVTLIIGKGNHSR----HQVPVIYNKLI    
27 3880795Ce/1-133  90.6%  14.0%    QPMLELH-HLKKDQVVYFVEKYLQRYTLGNK-------------------HKEIQLIVGKGSHSI----DNDSAIQRKIR    
28 AAD30226.1       84.7%   8.6%    AWSLDVR-NLSVGAALIAVVHTLHRFRKRMLYYG--------------VVPRRIKLVTG-------------PTLKIVIA    
29 AC007169_11      96.5%  13.5%    DSCLDLH-LMSSGAARAMVHAWLLNIRSIVYEGH--------------ELPKVLSILTGWGKHSK---VVGDGALRRAVE    
30 AC008263_32      96.5%  13.5%    YWLINLH-VMSEGTAVIALSRTLAWFRKQMLVSG--------------DCPSRIDIVTGWGRRSR---VTGTSMVRQAVE    
31 CAB10416.1       94.1%  10.3%    QWSLHLK-SLSLGAALTALHVWMNDLSEAALESG-------------EEFPPLLGINTGHGKHKY-----SDKGLAAVFE    
32 AC008263_22      95.3%   9.7%    VWSVDVH-RMSEGGMYTALSVWLNDINDMLLKG---------------DLPQLAVVVSVRGQLEK-SSAARESPIAKAAF    
   consensus/100%                   ...hphh...........l......h...........................h.l..s...............h...h.    
   consensus/90%                    ...lch+.h....tsh..l..hht.h...........................h.lhhG.G.t.h.......t.l...l.    
   consensus/80%                    ...lDl+.thp.ttAh.hlt.hlt.h..t........................h.lhpGhGptth.......t.l..hl.    
   consensus/70%                    p..lDL+.uhphtpAhphlpthlpthh.th.....................ttlhllpGpGptph......tptlh.hlt    

                      cov    pid 81          .         1         .    ] 115
 1 YDAL_ECOLI      100.0% 100.0%    EFDD----VQAYCTALP-----HHGGSGACYVALR    
 2 YFCN_ECOLI       91.8%  17.4%    QHPH----VMAFHQAPK-----EYGGDAALLVLIE    
 3 YFCN_BUCAP       91.8%  18.4%    QHPD----IVAFHQAPK-----MFGNDAAIMVIIE    
 4 YC02_HAEIN       90.6%  17.6%    QHPK----VRALHQAPR-----EWGGEAAILILV-    
 5 MSU2_HELPY/1-78  90.6%  30.6%    NHPK----VVSFSDAPI-----NLGGSGVKIVKL-    
 6 AAF06041.1       88.2%  20.0%    KNTR----VSRYEQAN-------PMNHGCTVAYIK    
 7 MSU2_SYNY3/1-77  90.6%  27.1%    HHPL----VKSYALAPQ-----NDGGAGVTIAYLR    
 8 MUS2_AQUAE       91.8%  30.2%    KNEK----VKFFRDAYP-----KEGGSGVTVVYLE    
 9 CAB40814.2/1-79  91.8%  25.6%    NHRM----VKSIRFGAA-----AEGGNGVTIVEFK    
10 CAA11403/1-79    91.8%  23.3%    KHKS----VSDFRGGMP-----SEGGFGVTVATLK    
11 AAD36353.1/1-79  91.8%  25.6%    KDKR----VVSFRFGTP-----SEGGTGVTVVEVK    
12 MUS2_BORBU/1-78  90.6%  22.4%    ELKF----IRKYYFAHP-----SDGGSGKTIVEI-    
13 Y674_TREPA/1-12  94.1%  27.0%    RYVQAHPHAGELFHPAE-----RRGGKGTTWVLLK    
14 2558655At/1-141  92.9%   7.4%    KIMV--RTGSPMRIDR--------KNVGSFIAKGK    
15 6165456/24-152   92.9%  16.5%    RMLE----QQSIKYNS-------EVNEGRIYVYLP    
16 2132229/31-160   91.8%  17.2%    EFCA--KHGIRNHLEK--------GNSGVLVLELQ    
17 4972714/31-165   91.8%  13.2%    ARLG----ERRLRWQE--------VNPGLLRVKVF    
18 3201477/32-160   90.6%  12.8%    KLLE----REGVRYCE--------ENRGTLLIKLD    
19 3075391/37-176   94.1%   8.8%    RYLL---EEEGLDYSE--------PQAGLLRVIIY    
20 967093/31-164    91.8%  11.2%    VAYL---QGEGIPFTE--------LSAGSLMATII    
21 3668150/37-169   90.6%  14.1%    RLLQ----QDHWRFDA---------EHGQITVYGI    
22 YKJ0_YEAST/1-15  90.6%   8.6%    SFLE----KNHYIFWE---------ESSYFRIEGK    
23 860691/1-131     89.4%  14.4%    AMLQ----HNDYNYEL--------VNDGCIRFKV-    
24 2995584/35-162   91.8%   9.4%    EDLR----TDTFLSAV--------VKVKSIKAGYI    
25 2315582_Ce/1-12  89.4%   9.3%    RTFN--CRSRCKIFED-------KLNPGVLILSL-    
26 3875939Ce/1-137  90.6%  11.0%    EIYS-----DRISVDV--------KNTGRVFLHFK    
27 3880795Ce/1-133  90.6%  14.0%    RNYA-----ENVRSHP--------KNYGILLLKVP    
28 AAD30226.1       84.7%   8.6%    QMLS----SVESPFEVSK---VVLRAPGELVMEWF    
29 AC007169_11      96.5%  13.5%    VLLR----GMDAPFHLSKCNMGRFTSSGSVVATWL    
30 AC008263_32      96.5%  13.5%    ELLN----IFNFPFFTENGNSGCFVGSGEPLKNWL    
31 CAB10416.1       94.1%  10.3%    SHLK----ELNAPFHEAPDKVGWFLTTSVAAKAWL    
32 AC008263_22      95.3%   9.7%    SFLQDH-VSSSFSFTG--------WNGGRIMCQRS    
   consensus/100%                   .........................t.t..hh.h.    
   consensus/90%                    t.........th..t..........t.u.hhh.h.    
   consensus/80%                    ph.t......th..t.........hs.G.hhh.h.    
   consensus/70%                    phhp.....tph.ht.........hssGhhhhhh.