cov pid 1 [ . . . . : . . . 80 1 7245.FBpp0260913_from_38_to_106 100.0% 100.0% CMDTL--TGRQLYIGEVFTREDQ---CVRIQC-LESQ------QLWEDSCQVPK--LTHGDCKPI-PSTNVRAEYPRCCP 2 7244.FBpp0230051_from_25_to_93 100.0% 63.8% CSDTL--SGRQLYVGEVFTRSGQ---CVRVQC-LGTL------QLWEDSCKVPG--ALKGACNVL-PPTEANEDYPRCCP 3 7237.FBpp0285614_from_39_to_107 100.0% 68.1% CMDTQ--TGRQLYVGEVFTRLEQ---CMRVQC-LGTL------QLWEDSCLVPS--SIKGDCRSI-PPTESNLEYPRCCP 4 7217.FBpp0123481_from_38_to_106 100.0% 68.1% CMDTV--TGRQLYVGEVFTRPGQ---CIRIQC-LGTL------QLWEDSCLVPK--LSKGNCRPV-QPEEENLEYPRCCP 5 6945.ISCW018759-PA_from_37_to_100 91.3% 22.9% CAYD----GHLLSHNSALDRQSP---CEKVICDTEQR------VVYIGLCSPV---ANPENCEI----RTRDERYPYCCP 6 6945.ISCW007091-PA_from_5_to_71 92.8% 22.2% CSFE----GHLMSHGEVVKKGEP---CESYECDAENE------LMAIKRCHYGVYQGAPPNCTL----QKNPGEFPTCCP 7 121224.XP_002426862_from_45_to_120 100.0% 22.4% CFAST--KCTTVEPGKSWDLTPF---CGRSTCVVAEGEQAGRLLELVEDCGPLP--KANPKCKLS-EKTNKTAPFPDCCP 8 7165.AGAP002085-PA_from_59_to_134 100.0% 23.7% CFAST--KCATFEPGQYWDLTPF---CGRSTCVLSDDAQPRL-LELVEDCGPLP--LANDKCKLDTEKTNKTAPFPACCP 9 7222.FBpp0157897_from_59_to_136 100.0% 21.8% CFAST--RCATVEPGKTWELTPF---CGRSTC-VQNEENPAKLLELVEDCGPLPLSLANDKCKLDTEKTNKTAPFPFCCP 10 7222.FBpp0151824_from_51_to_115 92.8% 21.4% CIYR----GDELKLGINNGIPP----CQRLTC-NEDG------SMLVEGCGK----VRFQKCNQG-ERIHQTDPFPDCCL 11 7237.FBpp0285607_from_41_to_105 92.8% 22.9% CTYR----GDVLESGVNNGISP----CQRLTC-NEDG------SILIEGCGK----LRIENCNRG-ERIYHGKPFPECCK 12 7217.FBpp0123480_from_44_to_108 92.8% 22.9% CIYR----GDTLQLGVNNGISP----CQRLTC-HEDG------SILIEGCGK----PRFVDCNRG-ERINPGEPFPDCCK 13 7217.FBpp0118256_from_46_to_109 92.8% 17.1% KKYDI----FALQPGEEVNDPNT---CGTTVCMNAEG------LAYVYYCPST---LPSSGCLVD-QAMDTLLKFPECC- 14 7227.FBpp0289674_from_46_to_109 87.0% 5.4% KQYDV-----FALQPGEEVSDPNT---CGVQVCMNSEG------LTHVYYCPRT---LPSSGCQDD-KAMDLLLKFPECC 15 7260.FBpp0251164_from_309_to_372 91.3% 21.4% CKGKS---GD-IEVGGTQKDPNV---CGVYVCQNTEG------DALIHYCQQP---AAYQDCEE--SGVSTVMEFPMCC- 16 7222.FBpp0154650_from_131_to_195 92.8% 21.4% CKSK---EGAEMKVGEVVDDPLT---CGVFVCQNVDG------DALIHYCQKP---APFENCLT--DGVSTITPFPECC- 17 6945.ISCW000806-PA_from_37_to_104 92.8% 17.8% CIWK----KYVIPDGGHLNLANP---CISLTCDGKLK------YLRGASCGRIAHEGIPKNCTL----GKGKGIYPKCCK 18 6945.ISCW004916-PA_from_39_to_103 92.8% 18.6% CVFE----NLTIATGTSIRQELP---CRRLTCVGQHK------TVFIQECTTYH--CPTSKCRL----ERREGPYPDCCP 19 6945.ISCW011045-PA_from_34_to_97 91.3% 18.6% CKYG----NHLIADGASLNLENP---CQTFYCNAQLG------TISSLGCALM---PNPSNCRV----YKGTGPYPKCCN 20 6945.ISCW003087-PA_from_38_to_101 91.3% 20.0% CKYK----NRLVADGASLRFENP---CQSWTCDVRSR------SFAILPCGII---ANPMNCPV----FKGTGPYPSCCY 21 6945.ISCW019353-PA_from_37_to_100 91.3% 20.0% CTYE----NHTVANGESLKWADP---CQTWECNVEER------SFAVLGCGLV---ANPSGCEL----VRGTGPYPDCCY 22 6945.ISCW023495-PA_from_37_to_100 91.3% 22.9% CKWG----NYLVPDGESLNLEDP---CQTWQCSVEDR------SFAVLGCGLI---GNPYNCEI----VRGTGPYPNCCY 23 7260.FBpp0245117_from_32_to_102 97.1% 20.5% CYYEE--LKQPIPKNQSYKPINRDGHCESIYC-RPDF------VLEIAYCGRHNL-RPTGNCKI---DSDMRRSFPDCCP 24 7227.FBpp0073294_from_37_to_107 97.1% 17.8% CYYEE--LNQAIPKKQSYKPINREGYCQSIYC-RPDY------VLEISYCGRHNL-VPTEKCRI---ASDMRRTFPECCP 25 7260.FBpp0246367_from_37_to_106 97.1% 19.4% CYYEE--LEMSIALNATNYPVDYDSYCVKVHC-RDDY------VLVIRHCDRM---QLPNGCSF--TSNDYAQPYPDCCA 26 7244.FBpp0231349_from_44_to_113 97.1% 19.4% CYYAE--LELAVPRNGTVFPLDRLDFCAQVYC-REDY------VLMIKHCDRM---QLADGCHF--TPNDYTKPYPDCCP 27 7222.FBpp0158480_from_42_to_111 97.1% 19.4% CYYAE--LELAVRRNDTSFPVDVPHFCAQVHC-RDDY------VLMIKHCDRI---QLANGCVF--TSNDYSLPYPDCCA 28 7245.FBpp0262327_from_46_to_116 98.6% 22.2% CLYEE--LDVAVPLHGSVLPSGQQGYCIRLEC-TDDY------LLLIHHCDKQP--WPRPGCHL--SPNDYDFKYPECCP 29 7237.FBpp0283296_from_42_to_112 98.6% 22.2% CYYEE--LDLAVPLNGEVLPVNHKDYCVKVLC-ADDY------LLMIKHCEPQP--FPLPGCRL--SSGNYAVQFPECCP 30 7217.FBpp0123584_from_40_to_110 98.6% 22.2% CIYEE--LDLAVPLYGSALPTGYRGYCVKAMC-TEDY------LLMIRHCDPLP--FPRNGCRL--SAGNFELQHPHCCP 31 6945.ISCW019355-PA_from_37_to_100 91.3% 21.4% CFFN----NVTIEHGTAHLSENP---CESWRCDATTL------DITIFGCGVV---GVGEGCRL----IPGHGVYPECCP 32 7159.AAEL000165-PB_from_35_to_103 98.6% 27.1% CYDTE--TKIHFKPGENRQRPGM---CEEMSC-GTDF------SIHFFGCGLAIL-DDDPDCEP--IVQDFTKDYPQCCH 33 7176.CPIJ000699-PA_from_37_to_104 98.6% 20.3% CYDEG--TQTVVAPLESAKLPKS---CTKVFC-STNL------SLTYTTCGSVL--VNDPHCEK--IEQDLTKDFPECCH 34 7159.AAEL000200-PA_from_36_to_103 98.6% 23.2% CYDPT--SKLVLDPDEEKSIPGA---CTEAYC-SRDY------SLTFTSCVLSI--VADPNCEK--IKQDLTKDYPECCH 35 6945.ISCW023807-PA_from_37_to_101 91.3% 21.1% CTYR----NITLKDGHSDNFQYP---CEFWTCNATAK------TLTVEGCGV----ARYGSCRY---VHHPRFYWPHCCR 36 6945.ISCW006059-PA_from_37_to_101 91.3% 22.5% CTYR----NITLKDGHSEPFKFP---CEYWSCNATAK------TLTIDGCGV----PRYGSCLY---VHNYNFYWPLCCR 37 7165.AGAP010047-PA_from_44_to_107 97.1% 21.4% CYDES--LKINVPVNEVRQRTGK---CESMSC-SDDY------SLHVAGCGSI---AVGPGMII--TPTDYSKPYPDCCP 38 7165.AGAP010046-PA_from_45_to_108 97.1% 18.6% CYDES--LQINVPVNEERQRPGK---CESIRC-SDDY------SLHGIGCGFF---AVGPGMVL--TKIDYSKPFPDCCP 39 7176.CPIJ006227-PA_from_37_to_100 92.8% 23.2% CYDGQ--TKTTVKKGFSKYKN-----CEKWTC-SNDY------TLSVTGCGVA---AVPKGCRT---TKDTSKKYPDCCP 40 7176.CPIJ012666-PA_from_37_to_100 92.8% 24.6% CYDPD--SKTVVEKGSAVYQN-----CEKWSC-SDDY------FLQITGCGLA---VADGDCRL---ETDSSKQYPECCP 41 7222.FBpp0150291_from_39_to_105 95.7% 24.3% CYDKL--TRRSMLPNKEYKPKGI---CAAMTCDIEAR------QINIETCPY----IEMPGCEE--LPSDLNWSFPKCCP 42 7217.FBpp0127712_from_13_to_79 95.7% 24.3% CFDKF--TRKALLPDKEYKPKGI---CASMTCSLEAR------EISIETCPY----VEAPGCEE--LPTDPNWSFPKCCP 43 7425.XP_001599562_from_36_to_93 82.6% 15.7% CTNT------------PTKAENE---CSSFRCNKDNT------KIIGVTCTEAR--CSGKPVSF---KGDPSKPYPHCCM 44 121224.XP_002429893_from_51_to_122 95.7% 20.0% CYDKD--ENVFYKPGQEMKWNGEE--CARKICAVSFGTGPS--YIEIQTCAKI---DVSPECYI---KINSSKPYPECCG 45 7237.FBpp0283309_from_27_to_90 92.8% 26.1% CEFR----GLKLLRGQSYQPADQ---CMQYTC-QEAK------LMVGKACPLV---AGPKRCKL---VSDATKPYPKCCP 46 7222.FBpp0158481_from_24_to_87 92.8% 24.6% CQIA----GRRLQPGETYQPPGR---CVLNTC-GSNG------ITTSKTCPSL---SSLQPCKI---VEDASKPFPKCCP 47 7227.FBpp0073330_from_25_to_88 92.8% 27.5% CEIG----GHQFKTGEKYTPEGR---CLQYTC-QAPK------QVTALGCPAI---ASLKPCKM---EEDLSKPYPGCCP 48 7245.FBpp0262328_from_25_to_88 91.3% 22.9% CNFA----GHKFNAGEKYTPEGR---CLQYTCAGRN-------AVTAVGCPAV---ASLKPCKM---EEDLSKPFPGCCP 49 7217.FBpp0123585_from_25_to_89 92.8% 27.1% CEIA----GQKLNKGETYKPPDR---CIQHTCLGAPR------RIQTVMCPSV---ASLKPCKL---VSDTSKPYPACCP 50 7260.FBpp0246378_from_25_to_88 92.8% 26.1% CESG----GHKLKVGESYKPADR---CVQYTC-TAPG------SITGKTCASA---ASLKPCRI---VQDVTKPFPQCCP 51 7244.FBpp0231350_from_24_to_87 92.8% 27.5% CEVG----GQSLKVGQTYKPPDR---CIEHTC-QPNG------SIKGKTCPHV---ATLKPCKL---VENVNEPFPKCCP 52 7244.FBpp0234402_from_40_to_109 98.6% 21.1% CVIS---SELILNEGASIKDPTHE--CRQIVC-GSHG------STIFQSCGIIS--GLPTTCRFG-SFINMDLPYPHCCE 53 7222.FBpp0144032_from_52_to_120 98.6% 22.9% CAIT---SRLILNEGVTIKDPTHE--CRQIVC-GANG------VTVFQSCGAIS--GIPALCRFG-DYVNVELPYPQCSY 54 7260.FBpp0253492_from_36_to_104 97.1% 21.1% CTIS---PNMILNEGVSVKDPNHK--CRQIIC-GHNG------MTIVQNCGVS---ALSRPCRYG-DYKNIMLPYPKCCV 55 7227.FBpp0111283_from_38_to_106 97.1% 23.9% CTIN---PGLVLNPGVSIKDPTHE--CRKILC-GLNG------RVVYHSCGVS---ILSPPCRYG-DYINPDLPYPDCCS 56 7217.FBpp0124392_from_38_to_106 97.1% 22.5% CTIS---PKLILDPGVSIKDPTHD--CRQIVC-GMNG------WAVFHSCGVS---IPHPPCRNG-DYMDPELPYPECCT 57 7244.FBpp0234413_from_41_to_109 97.1% 28.2% CYIK---PNLILNPGERAKYPDME--CARIIC-AEHS------MAEIHTCGVE---APPPGCKMG-ATKFPDADYPKCCE 58 7222.FBpp0144033_from_40_to_107 95.7% 22.5% CYVN---ANLIMNPGDKAKYPDMD--CARIIC-ENDS------MAEIHTCGV----VSIEGCTFG-AVKFPDADYPDCCE 59 7227.FBpp0111323_from_37_to_103 95.7% 27.1% CVLE----GLVLEKGQSARHPQR---CERIIC-GENS------AAEIQSCGAY---GLPPGKKFG-KYTNPNADYPDCCN 60 7237.FBpp0280838_from_39_to_101 95.7% 22.9% CVVD----GLVLNDGQSARHPNM---CARVVC-GKNS------EGQIQTCGVV---GLQPKQKFG-KYTAPNADYPECCN 61 7245.FBpp0262617_from_43_to_111 97.1% 23.9% CVLD---TNTILSPGQTGLAPNLQ--CVRAEC-HADG------VVTFKTCDAV---APPPGCKQR-DFVNINRDFPECCE 62 7217.FBpp0124631_from_42_to_110 97.1% 18.3% CVLG---PNSVMSPGQTGKAPNHP--CAGVEC-HGDG------HATITTCAAV---APPKGCKLR-DFVNTNRDFPACCE 63 7222.FBpp0158467_from_42_to_110 97.1% 19.7% CVVT---SDVIMSPGQTGKAPNHP--CASVTC-MDNG------HVEFHTCAAV---APPKGCKQR-DFVNTNRSFPECCE 64 7237.FBpp0273297_from_40_to_108 97.1% 19.7% CVLD---SNTVMSPGQKGKHPNHP--CAGVTC-MEGG------LVEFKTCDAT---APPKGCKMR-DFVNTKRSFPECCE 65 7260.FBpp0248936_from_43_to_111 97.1% 18.3% CVLD---LNTVMSPGQTGKAPNHP--CAGVSC-MDGG------HVEFRTCAAV---APPKGCKLR-DFVNTNRPYPECCE 66 7244.FBpp0232154_from_38_to_104 95.7% 22.9% CVLD---GNTILSKGETKTLPN----CQLLTC-NGDG------AATIATCGTK---AVPPPCKLG-DAKYPDADYPKCCI 67 7222.FBpp0145568_from_38_to_104 95.7% 28.6% CVIN---ADTILSEGETKTDSN----CQLISC-HANG------DASFSSCGVK---GAPDPCKIG-DKKYPKAEYPKCCI 68 7222.FBpp0144032_from_127_to_191 98.6% 20.5% CVVDMGTSVVLLKFAESVKLESLP--CTRIFC-MGDG------WGMLQTCNDI---FVPPGCKYV-ARNSPDTDFPKCCE 69 7227.FBpp0111286_from_40_to_111 98.6% 24.7% CVLDIDSTRILLKMGQKFRPKFLP--CTTILC-IGDG------YGMLFTCDKK---EPPEHCHFK-DYLNGDANYPDCCY 70 7237.FBpp0279594_from_115_to_186 98.6% 21.9% CVIDTPSSVVLLESGQAFKLPNID--CATIFC-ISNG------WGSLFTCENK---APPDDCRFS-DALDPNALYPECCK consensus/100% p..............................s.................h........................h..ps. consensus/90% C..t....t..h..s...........C.th.C..tt........h.h..C...........C.......t.th.aPtCC. consensus/80% Ch.p....th.h..stpht..s....C.ph.C..tsh.......h.h.tCs.....h...sCph.....p.ph.aPpCC. consensus/70% Chhp....shhlt.Gpshp.ss....CtphhC.tpst.......hhhpsCshh...ss..sCch....hshstsaPcCC. cov pid 81 ] 86 1 7245.FBpp0260913_from_38_to_106 100.0% 100.0% Q-YEC- 2 7244.FBpp0230051_from_25_to_93 100.0% 63.8% M-YEC- 3 7237.FBpp0285614_from_39_to_107 100.0% 68.1% L-YEC- 4 7217.FBpp0123481_from_38_to_106 100.0% 68.1% L-YEC- 5 6945.ISCW018759-PA_from_37_to_100 91.3% 22.9% Q-PYC- 6 6945.ISCW007091-PA_from_5_to_71 92.8% 22.2% W-PQC- 7 121224.XP_002426862_from_45_to_120 100.0% 22.4% I-FEC- 8 7165.AGAP002085-PA_from_59_to_134 100.0% 23.7% T-FTC- 9 7222.FBpp0157897_from_59_to_136 100.0% 21.8% K-FIC- 10 7222.FBpp0151824_from_51_to_115 92.8% 21.4% LRYKC- 11 7237.FBpp0285607_from_41_to_105 92.8% 22.9% LKYKC- 12 7217.FBpp0123480_from_44_to_108 92.8% 22.9% LRFKC- 13 7217.FBpp0118256_from_46_to_109 92.8% 17.1% --WTC- 14 7227.FBpp0289674_from_46_to_109 87.0% 5.4% ---WTC 15 7260.FBpp0251164_from_309_to_372 91.3% 21.4% --WHC- 16 7222.FBpp0154650_from_131_to_195 92.8% 21.4% --WKC- 17 6945.ISCW000806-PA_from_37_to_104 92.8% 17.8% TQLTC- 18 6945.ISCW004916-PA_from_39_to_103 92.8% 18.6% M-PVY- 19 6945.ISCW011045-PA_from_34_to_97 91.3% 18.6% Q-INC- 20 6945.ISCW003087-PA_from_38_to_101 91.3% 20.0% E-VNC- 21 6945.ISCW019353-PA_from_37_to_100 91.3% 20.0% R-AVC- 22 6945.ISCW023495-PA_from_37_to_100 91.3% 22.9% R-TNC- 23 7260.FBpp0245117_from_32_to_102 97.1% 20.5% K-LIC- 24 7227.FBpp0073294_from_37_to_107 97.1% 17.8% K-LVC- 25 7260.FBpp0246367_from_37_to_106 97.1% 19.4% R-LVC- 26 7244.FBpp0231349_from_44_to_113 97.1% 19.4% T-RIC- 27 7222.FBpp0158480_from_42_to_111 97.1% 19.4% R-LEC- 28 7245.FBpp0262327_from_46_to_116 98.6% 22.2% Q-LEC- 29 7237.FBpp0283296_from_42_to_112 98.6% 22.2% Q-LEC- 30 7217.FBpp0123584_from_40_to_110 98.6% 22.2% Q-MEC- 31 6945.ISCW019355-PA_from_37_to_100 91.3% 21.4% Q-LTC- 32 7159.AAEL000165-PB_from_35_to_103 98.6% 27.1% K-YKC- 33 7176.CPIJ000699-PA_from_37_to_104 98.6% 20.3% K-YKC- 34 7159.AAEL000200-PA_from_36_to_103 98.6% 23.2% K-YKC- 35 6945.ISCW023807-PA_from_37_to_101 91.3% 21.1% MTRVC- 36 6945.ISCW006059-PA_from_37_to_101 91.3% 22.5% MSRLC- 37 7165.AGAP010047-PA_from_44_to_107 97.1% 21.4% HPALS- 38 7165.AGAP010046-PA_from_45_to_108 97.1% 18.6% KAIKQ- 39 7176.CPIJ006227-PA_from_37_to_100 92.8% 23.2% K-VVC- 40 7176.CPIJ012666-PA_from_37_to_100 92.8% 24.6% K-TVC- 41 7222.FBpp0150291_from_39_to_105 95.7% 24.3% Q-FKC- 42 7217.FBpp0127712_from_13_to_79 95.7% 24.3% Q-FKC- 43 7425.XP_001599562_from_36_to_93 82.6% 15.7% V-PIC- 44 121224.XP_002429893_from_51_to_122 95.7% 20.0% Q-IIC- 45 7237.FBpp0283309_from_27_to_90 92.8% 26.1% K-LQC- 46 7222.FBpp0158481_from_24_to_87 92.8% 24.6% R-FDC- 47 7227.FBpp0073330_from_25_to_88 92.8% 27.5% K-FNC- 48 7245.FBpp0262328_from_25_to_88 91.3% 22.9% Y-FNC- 49 7217.FBpp0123585_from_25_to_89 92.8% 27.1% K-YEC- 50 7260.FBpp0246378_from_25_to_88 92.8% 26.1% K-FEC- 51 7244.FBpp0231350_from_24_to_87 92.8% 27.5% Y-YDC- 52 7244.FBpp0234402_from_40_to_109 98.6% 21.1% RTIIC- 53 7222.FBpp0144032_from_52_to_120 98.6% 22.9% P-GRC- 54 7260.FBpp0253492_from_36_to_104 97.1% 21.1% RHIIC- 55 7227.FBpp0111283_from_38_to_106 97.1% 23.9% RTLLC- 56 7217.FBpp0124392_from_38_to_106 97.1% 22.5% RTLFC- 57 7244.FBpp0234413_from_41_to_109 97.1% 28.2% REIIC- 58 7222.FBpp0144033_from_40_to_107 95.7% 22.5% REVIC- 59 7227.FBpp0111323_from_37_to_103 95.7% 27.1% REIIN- 60 7237.FBpp0280838_from_39_to_101 95.7% 22.9% REILD- 61 7245.FBpp0262617_from_43_to_111 97.1% 23.9% RKYNC- 62 7217.FBpp0124631_from_42_to_110 97.1% 18.3% RNYDC- 63 7222.FBpp0158467_from_42_to_110 97.1% 19.7% RAYDC- 64 7237.FBpp0273297_from_40_to_108 97.1% 19.7% RSYHC- 65 7260.FBpp0248936_from_43_to_111 97.1% 18.3% RSHDC- 66 7244.FBpp0232154_from_38_to_104 95.7% 22.9% NAVHC- 67 7222.FBpp0145568_from_38_to_104 95.7% 28.6% NVLHC- 68 7222.FBpp0144032_from_127_to_191 98.6% 20.5% RDVIC- 69 7227.FBpp0111286_from_40_to_111 98.6% 24.7% RKLEC- 70 7237.FBpp0279594_from_115_to_186 98.6% 21.9% RRVIC- consensus/100% ...... consensus/90% ..h.C. consensus/80% ..h.C. consensus/70% p.h.C.