Family alignment for the TFIIE domain, displayed in

                     cov    pid   1 [        .         .         .         .         :         .         .         . 80 
 1 A64397_pir/1-1 100.0% 100.0%     EKGFEVIDVLLEKGETTEEEIAKELGVKLNVVRKLLYKLYD--ARLVDYKRWKDEDTN----------------------    
 2 O27705_spt/1-1  98.6%  45.0%     EEAIPVLECLMK-GKVTDEEISEKTQLKLNIVRRILYRLYD--AGVASYKRSKDPETQ----------------------    
 3 CAB50336_s/1-1  99.3%  41.1%     DEAVEIVKALEKKGEATDEELAEITGIRVNTVRKILYALYD--EKLADFKRIKDEETG----------------------    
 4 O29501_spt/1-1  99.3%  34.3%     GEVGLILFSLGIEGEFTDDQLSLELGIEINEIRKALFALYE--IGLADYVRRRDDETG----------------------    
 5 Q9YAD5_spt/1-1 100.0%  22.3%     AHIFHLIYEETPNGGISDDDLESLTGYKQSDIRRILRLLGD--KRIIVSRKGRHPRKE----------------------    
 6 T2EA_YEAST/1-4 100.0%  16.9%     GSFVLVLDAILFHSVLAEDDLKQLLSINKTELGPLIARLRSDRLISIHKQREYPPNSKS---------------------    
 7 Q9ZVS9_spt/1-4 100.0%  15.3%     GIAAVVLDALARRQWVREEDLAKDLQLHAKQLRKIIRLFEEEKLIMRDHRKETAKGAKMYSAAVAATTDGRAEDKVKLHT    
 8 T2EA_HUMAN      99.3%  20.8%     IEHALALDILIRNSCVKEEDMLELLKFDRKQLRSVLNNLKGDKFIKCRMRVETAADGKTT--------------------    
 9 O96880          99.3%  20.8%     LEDALIIDMLVRNPCMKEDDIGELLRFEKKQLRARITTLRTDKFIQIRLKMETGPDGKAQ--------------------    
10 O62513          99.3%  14.1%     SEHFIIVYHIMRAQCIREENLKARIQFDQKMLRQLLASLKAEKLVKERTITQKNENNRTV--------------------    
   consensus/100%                   ...h.hl........ht--ph...hthp.p.lt.hl..h.t...h.....h.h..ttt......................    
   consensus/90%                    .phh.ll..lh.tt.hp--pltt.hthc.p.lRthlh.Lht..hh.hphhh.ps.pst......................    
   consensus/80%                    tchh.ll.hlhhpsthp---ltp.hthchp.lRpllhtLhs..hhhhchpptps.psp......................    
   consensus/70%                    tcthhllctLhcpuphp---ltphlthchpplRplLhtLhs..hhhhch++pps.csp......................    

                     cov    pid  81          .         1         .         .         .         .         :         . 160
 1 A64397_pir/1-1 100.0% 100.0%     -------WYSYTWLPTLEKLPYVVKKKINELIKDLEKKLEFEKNNMFFFCPN--CNVRFTFEEAMDYG--------FSCP    
 2 O27705_spt/1-1  98.6%  45.0%     -------WYTYTWKFEPEKVTEMIKRKHSEIVRKLREALEFEENNMFFVCVN-GHY-RFTFDEATEEN--------FTCP    
 3 CAB50336_s/1-1  99.3%  41.1%     -------WYYYYWHLETKRLPEIIRARKLRELERLKKMLQEETSEVYYHCGNPEHP-KLTFDEAFEYG--------FTCP    
 4 O29501_spt/1-1  99.3%  34.3%     -------WMEYYWRINYDKALDVLKRELEKTAKKLREKIEAETSTIYYICPN-MCV-KVSYNDAMELN--------FTCP    
 5 Q9YAD5_spt/1-1 100.0%  22.3%     -------ATRYFWRIDSDTINVSLLTLKKKVLEKLVVKEAHDSGNSYYTCPR--CGSKYSFDEAFTLD--------FTCP    
 6 T2EA_YEAST/1-4 100.0%  16.9%     -------VERVYYYVKYPHAIDAIKWKVHQVVQRLKDDLDKNSEPNGYMCPI--CLTKYTQLEAVQLLN-FDRTE-FLCS    
 7 Q9ZVS9_spt/1-4 100.0%  15.3%     HSYCCLDYAQARFISSFLQICDVVRFRLHRMKKRLKDELEDKNTVQEYGCPN--CQRKYNALDALRLISMVDDS--FHCE    
 8 T2EA_HUMAN      99.3%  20.8%     -------RHNYYF-INYRTLVNVVKYKLDHMRRRIETDERDSTNRASFKCPV--CSSTFTDLEANQLFDPMTGT--FRCT    
 9 O96880          99.3%  20.8%     -------KVNYYF-INYKTFVNVVKYKLDLMRKRMETEERDATSRASFKCSS--CSKTFTDLEADQLFDMATLE--FRCT    
10 O62513          99.3%  14.1%     -------SIIFYY-INYRAVLNVVRYKIDHMRQKLESREQMDTNRAHYRCGA--CQSSYDMLEINRILDAESGR--LICW    
   consensus/100%                   ..........hha..p..th...lhh.h...hpch....t.tpt...ahCs...p..phs..-h.p..........h.C.    
   consensus/90%                    .......hh.hha..p..ph..hl+hchpphhp+lcpt.p.pps...ahCs...p..phs..-A.ph.........FhC.    
   consensus/80%                    .......hhpaha.hphcph.psl+h+hpchhc+Lcpc.p.pssp..ahCss..C..pao..EA.ph.........FpCs    
   consensus/70%                    .......hhpYaahlshcplssll+h+lcchhc+Lcpc.ctcosphhahCss..C..+aoh.EAhplh........FpCs    

                     cov    pid 161          .         ] 180
 1 A64397_pir/1-1 100.0% 100.0%     GCGNMLQEFDNSELIKDLEE    
 2 O27705_spt/1-1  98.6%  45.0%     ECGSKMEFMDNSEIIQEIKD    
 3 CAB50336_s/1-1  99.3%  41.1%     ICGEILQEYDNSAVIEELKK    
 4 O29501_spt/1-1  99.3%  34.3%     RCGAMLDYLDCSKAIEKIEE    
 5 Q9YAD5_spt/1-1 100.0%  22.3%     RCGEVLEEADSREGLERLRR    
 6 T2EA_YEAST/1-4 100.0%  16.9%     LCDEPLVEDDSGKKNKEKQD    
 7 Q9ZVS9_spt/1-4 100.0%  15.3%     NCNGELVVECNKLTSEEVVD    
 8 T2EA_HUMAN      99.3%  20.8%     FCHTEVEEDESAMPKKDART    
 9 O96880          99.3%  20.8%     FCGSSVEEDSAAMPKKDSRL    
10 O62513          99.3%  14.1%     RCHGDVLADETVVPSRTTRT    
   consensus/100%                   .Ctt.h...ps....pp...    
   consensus/90%                    .Ctt.l...pst...cchpp    
   consensus/80%                    hCst.l...-ss...cchcp    
   consensus/70%                    hCss.lpt.-suhshc-hcc