cov pid 1 [ . . . . : . . . 80 1 gi|4759230|ref| 100.0% 100.0% CQPVRYGQCWVFAAVMCTVMRCLGIPTRVITNFDSGHDTDGNLIIDEYYDNTGRILGNKKKDTIWNFHVWNECWMARKDL 2 gi|4507477|ref| 98.9% 66.0% FSPVRYGQCWVFAGTLNTALRSLGIPSRVITNFNSAHDTDRNLSVDVYYDPMGNPL-DKGSDSVWNFHVWNEGWFVRSDL 3 gi|3915892|sp|P 100.0% 53.2% KQAVCFGQCWVFAGILTTVLRALGIPARSVTGFDSAHDTERNLTVDTYVNENGEKITSMTHDSVWNFHVWTDAWMKRPDL 4 gi|345423|pir|| 100.0% 60.6% GVPVKYGQCWVFAGVANTVSRALGIPSRTVTNYDSAHDTDDTLTIDKWFDKNGDKIEDATSDSIWNFHVWNDCWMARPDL 5 gi|1703311|sp|P 100.0% 51.0% KKPVKYGQCWVFAGVLTTVCRALGLPARTVTTYSAAHDTQNSLTVDYFVDDKGEIMEEMNSDSIWNFHVWTEVWMERPDL 6 gi|4558163|pdb| 100.0% 54.3% ENPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYFSAHDNDANLQMDIFLEEDGNVNSKLTKDSVWNYHCWNEAWMTRPDL 7 gi|339604/50-18 100.0% 57.4% GYSVPYGQCWVFAGVTTTVLRCLGLATRTVTNFNSAHDTDTSLTMDIYFDENMKPLEHLNHDSVWNFHVWNDCWMKRPDL 8 gi|2148922|gb|A 98.9% 66.0% CQPVKYGQCWVFAAVACTVMRCLGVPSRVVTNYNSAHDTNGNLVIDRYLSETGMEE-RRSTDMIWNFHCWVECWMTRPDL 9 gi|2133949|pir| 100.0% 60.6% AQRVRYGQCWVFSGVACTVLRCLGIPTRPVTNYSSAHDTDGNLNVDYLYDEQLESVSEGRKDMIWNYHCWVESWMDREDL 10 gi|4557559|ref| 100.0% 52.1% GRPVYDGQAWVLAAVACTVLRCLGIPARVVTTFASAQGTGGRLLIDEYYNEEGLQNGEGQRGRIWIFQTSTECWMTRPAL 11 gi|2496516|sp|Q 72.3% 19.1% ALHQCRGVCQDFAHLTLIVLRSMGIPGRYVSGYLHPKRDAVVGK-----------------TVEGRSHAWIQAWT----- 12 gi|3136019|emb| 79.8% 17.0% VLLAREGVCQDFARLAIACLRANGLAASYVSGYLATDPPPGKDRMV----------------GIDVTHAWASVWTPQQSG 13 gi|1653166/46-1 69.1% 17.0% TWRSREGSCRDLTVLFMEVCRAMGLAARFVSGYEVGDPEI----------------------SQWELHAWAEVYLPG--- 14 gi|2996036/37-1 69.1% 21.3% TLSQRTGTCRDFALLWVEACRVAGLAARFVSGYQRGDETT----------------------TQHELHAWGEVYMPG--- 15 gi|1460074|emb| 81.9% 16.0% TLRTGVGSCRDSAWLLVSILRQFGLAARFVSGYLVQLASDIEALDGPSGPAA----------DFTDLHAWAEAYIPG--- 16 gi|3256717|dbj| 73.4% 18.1% LFYTKRGVCLDFNTAFVILARIAGIPARLVTGYKIDPIPGEQIV------------------RAKQAHAWAEIYLKG--- 17 gi|2621884/43-1 67.0% 20.2% TLRLRKGNCVDQAHLMVALARTSGIPARYVRGYCRFIS------------------------GNWYSHVWAQVWIRG--- 18 gi|5689968|emb| 75.5% 21.3% FLKDKEGFCVHFSFAMAAMARSLGIPARVAVGFAPGSPQADGSVSV----------------GLRDAHAWPEVYFEG--- 19 gi|1708643/37-1 80.9% 21.3% LFETKMGYCDNFSSAMVVLLRSAGIPARWVKGYTSGEYKEAGNKNGSIYEV-----------TNNNAHSWVEVYFPE--- 20 gi|2650697/37-1 72.3% 16.0% LFKTKRGTAREFATAFVLLAQSIGIPARAVFGYLADPVETNQTI------------------FASDAYVWAEVRFK---- 21 gi|1652987/35-1 76.6% 18.1% LFEYEGGLPDHFATVLTIMLRSLDIPARLTVGFAPGQFNPFTGYYLV---------------HNTDAYALTEVLFPR--- 22 gi|2984185/37-1 75.5% 18.1% LFKTKRGNCEYFASATAVLLRLMDVPTRLVSGFYGAMKNEYGNYYIV---------------INAMAHVWVEAYDG---- 23 1707725/1-60 63.8% 16.0% SLIMGSGVCVNYSHVAIGILRALGIPARYVIGLIPF--------------------------STKEAHAWIEVKIG---- 24 2916971/1-70 74.5% 17.0% ALTCSVGNCNDIHALFVSLCRSVDIPARFVLGQALELPQPGAQDC-----------------EVCGYHCWAEFFVAG--- 25 2983528/1-75 79.8% 14.9% KGEKIGGKSADQSSLFVALCRSVGIPAREVFGIRVLPSSFSEGLSIK----------PGSKDITKAQHCRAEFWA----- 26 2621936/1-62 66.0% 14.9% TLHSGSANCCDHTHLLVALARASGIPARYMHGNCVFRS------------------------GNTYGHVWGQLYVN---- 27 1175402/1-84 89.4% 18.1% TTGVLKGKCTDINSVFVALARAAGIPAREIFGIRLGAAEKMGKYSKGAFGSANE---QGIANVSGGQHCRAEFYLAG--- 28 1651727/1-71 75.5% 14.9% ALRRGVGSCGEYVGVLLALARLNGIACRTAGRYKCPPHPLQRNLPM----------------EPDFNHVWFEFYLPG--- 29 1550668/1-79 84.0% 14.9% VIGHGVAFCMGKASSFVALCRAAGVPARIAFQTIDAPDKEFLSPQVRALWG-------GRTGRPFPWHSLGEAYLG---- 30 4049518/1-56 59.6% 17.0% LLDSRKGRCGEWANCFTFLCRALGSRARWIWN--------------------------------AEDHVWTEVYSNK--- 31 2650741/1-55 58.5% 14.9% IAYFKVGGCGELARLFCEAAKRAGFEARVVSDL-------------------------------GYDHAWVEVKIN---- 32 4980490/1-62 66.0% 13.8% VVNNLKGDCGFQALLFITMCRIAGVPARWQSGWYINPI-------------------------FGSPHDWALFYVEP--- 33 YDl117w/1-66 70.2% 8.5% ILYRKHCTPYELTWLFKKLANSLGITCEIVIGFLKTPSAINW--------------------EFKYNHCWLRILVN---- 34 sll1618/1-67 71.3% 17.0% VLARGETICSGYSNLYQALAKELGLDVVIIEGFAKGGDVIVG-------------------DDPDVNHAWNGVKID---- 35 Ye86_schpo/1-68 72.3% 12.8% VISEGQGTPFEVALLVKEMLQALDLWCEVIEGYLKSPDDIYYTR------------------DININHAWNVVTFD---- 36 K02c4.4/1-69 73.4% 11.7% LRGIKYG-TESYHVLFKRLCSYAGLHCVVIKGFSKSAGYQPGYSFD----------------DHRFRNTWNAVFLD---- 37 Q02890/1-56 59.6% 12.8% LLETRKGRCGEWCNLFTLILKSFGLDVRYVWN--------------------------------REDHVWCEYFSNFL-- 38 CAB49215/1-55 58.5% 10.6% VLHSKLANCEEYAKVFVYLMSQEGVKARIVRA-------------------------------PGEDHAWAEYYVE---- 39 O87990/1-63 67.0% 12.8% CLDGGFGICGNHQYLFLELMHRLGLEARSVGFWYIDPNAN-----------------------SRASHAAAEVLVD---- 40 AAD28463/1-61 64.9% 12.8% LWSTHMADCGGAAAWLVAEGRRRGLDVRFSFGLLVAKP-------------------------YSTPHCWAEFLVG---- 41 6018392 59.6% 14.9% LLQTRTGRCGEWANCFGLLLAALNLESRFIYD--------------------------------TTDHVWNEVYLLAE-- 42 2622144 61.7% 10.6% VEKTGYGDCWGLSDWSARKLAANGYKVKVVQG----------------------------ATSSSSRHRWLHVYSE---- 43 5458994 62.8% 11.7% IRKRSSVTPIEADILMVAYLRSLNIPARIVSIYSPP---------------------------DCTHYPFVEAYLS---- 44 3256865 62.8% 11.7% IMESSSISPTEAEILMVAYLRSLNIPARIVSVYSET---------------------------DCTYSPFVEAYLS---- 45 2650578 64.9% 13.8% FLIHRVGDCDDVAAAMAAVMKVKGYDVRFCVGQREGES-------------------------GDSKHAWVRIGDE---- consensus/100% ......h.s...........t..s..s..............................................h...... consensus/90% h.....u.s..hs.hhh.hhp..sl.sc.h.s...................................ash.phh...... consensus/80% hh..t.G.C..hs.hhhhhh+thGlssRhl.sh...............................h..HsWschhh..... consensus/70% hhththGpChthutlhstlhRshGlsuRhlhsh..s............................tt.HsWs-saht.... cov pid 81 . ] 98 1 gi|4759230|ref| 100.0% 100.0% PPA----YGGWQVLDATP 2 gi|4507477|ref| 98.9% 66.0% GPP----YGGWQVLDATP 3 gi|3915892|sp|P 100.0% 53.2% PKG----YDGWQAVDATP 4 gi|345423|pir|| 100.0% 60.6% PTG----YGGWQAYDSTP 5 gi|1703311|sp|P 100.0% 51.0% MPGDGAHYGGWQAVDSTP 6 gi|4558163|pdb| 100.0% 54.3% PVG----FGGWQAVDSTP 7 gi|339604/50-18 100.0% 57.4% PSG----FDGWQVVDATP 8 gi|2148922|gb|A 98.9% 66.0% APG----YDGWQALDPTP 9 gi|2133949|pir| 100.0% 60.6% PKG----YDGWQALDPTP 10 gi|4557559|ref| 100.0% 52.1% PQG----YDGWQILDPSA 11 gi|2496516|sp|Q 72.3% 19.1% --------GGWWNYDPTN 12 gi|3136019|emb| 79.8% 17.0% -------QCEWLGLDPTN 13 gi|1653166/46-1 69.1% 17.0% --------AGWRGYDPTH 14 gi|2996036/37-1 69.1% 21.3% --------GGWRGFDPTL 15 gi|1460074|emb| 81.9% 16.0% --------AGWIGLDPTS 16 gi|3256717|dbj| 73.4% 18.1% --------VGWIPIDATG 17 gi|2621884/43-1 67.0% 20.2% --------RGWVTADTTH 18 gi|5689968|emb| 75.5% 21.3% --------VGWTRFEPTP 19 gi|1708643/37-1 80.9% 21.3% --------QGWVTFEPTK 20 gi|2650697/37-1 72.3% 16.0% --------EGWMEFDPAP 21 gi|1652987/35-1 76.6% 18.1% --------LGWFMFDPIP 22 gi|2984185/37-1 75.5% 18.1% --------KKWVRVDTTP 23 1707725/1-60 63.8% 16.0% --------DVWFPVDPTN 24 2916971/1-70 74.5% 17.0% --------LGWLPADASC 25 2983528/1-75 79.8% 14.9% --------GEWIPVDPAD 26 2621936/1-62 66.0% 14.9% --------GRWYDADATS 27 1175402/1-84 89.4% 18.1% --------FGWVPVDSAD 28 1651727/1-71 75.5% 14.9% --------IGWLPMESNP 29 1550668/1-79 84.0% 14.9% --------RRWVKLDATI 30 4049518/1-56 59.6% 17.0% -------QQRWVHVDSGE 31 2650741/1-55 58.5% 14.9% --------NSWVVADPTV 32 4980490/1-62 66.0% 13.8% --------YGWLPADLSF 33 YDl117w/1-66 70.2% 8.5% --------KEWRFIDVIL 34 sll1618/1-67 71.3% 17.0% --------GQWYLLDTTW 35 Ye86_schpo/1-68 72.3% 12.8% --------NEVRLIDASF 36 K02c4.4/1-69 73.4% 11.7% --------GSWRFVQCNW 37 Q02890/1-56 59.6% 12.8% --------NRWVHVDSCE 38 CAB49215/1-55 58.5% 10.6% --------NYKIIFDPSN 39 O87990/1-63 67.0% 12.8% --------KKWRYVDITW 40 AAD28463/1-61 64.9% 12.8% --------GRWVPADPLL 41 6018392 59.6% 14.9% --------QRWCHVDPCE 42 2622144 61.7% 10.6% --------GRWTSFEPSL 43 5458994 62.8% 11.7% --------GKWYVIDFSH 44 3256865 62.8% 11.7% --------GKWYVIDFNH 45 2650578 64.9% 13.8% --------DVDYRYCVNR consensus/100% .............hp... consensus/90% .........tW..h-ss. consensus/80% ........ttW..hDss. consensus/70% ........ttWhhhDso.