cov pid 1 [ . . . . : . . . 80 1 G2707219/1-133 100.0% 100.0% PGQDGAQAGVDGT-------VSGWEEARINSSS--PLRYNRQIGE--FIVTRAGLYYLYCQVHFDE----------GKAV 2 TNFA_BOVIN/1-1 100.0% 16.4% PVAHVVADINSPG-------QLRWWDSYANALM--ANGVKLEDNQ--LVVPADGLYLIYSQVLFRGQGCP------STPL 3 P79374/1-147 100.0% 14.4% PVAHLIADQLAEG-------QLLWVGDVANTLL--MNGMELVDNQ--LVLPSTGLYLVYSQLLYKGSQCG------KESL 4 TNFC_HUMAN/1-1 100.0% 20.5% PAAHLIGAPLKGQ-------GLGWETTKEQAFL--TSGTQFSDAE-GLALPQDGLYYLYCLVGYRGRAPPGGGDPQGRSV 5 TRAI_HUMAN/1-1 97.0% 14.7% KNEKALGRKI-----------NSWESSRSGHSF--LSNLHLRNGE--LVIHEKGFYYIYSQTYFRFQEEI---KENTKND 6 OX4L_HUMAN/1-1 90.2% 5.9% QSIKVQFTEYKKE--------KGFILTSQKED----EIMKVQNNS--VIINCDGFYLISLKGYFS--------------Q 7 O02765/1-124 91.7% 6.0% TQLQILTSHECE--------EDSFILPLQKRD----GTMEVQNNS--VVIQCDGFYLLSLKGYFS--------------Q 8 TNFB_BOVIN/1-1 100.0% 18.2% PAAHLVGDPSTQD-------SLRWRANTDRAFL--RHGFSLSNNS--LLVPTSGLYFVYSQVVFSGRGCFP--RATPTPL 9 OX4L_MOUSE/1-1 93.2% 11.6% PIQRLRGAVTRCE------DGQLFISSYKNEY----QTMEVQNNS--VVIKCDGLYIIYLKGSFF--------------Q 10 FASL_HUMAN/1-1 96.2% 13.4% KVAHLTGKSNSRSM------PLEWEDTYGIVLL---SGVKYKKGG--LVINETGLYFVYSKVYFRGQSCNN--------L 11 G2815624/1-148 98.5% 18.8% PAAHLTGANSSLTGSG---GPLLWETQLGLAFL---RGLSYHDGA--LVVTKAGYYYIYSKVQLGGVGCPLG-----LAS 12 G2411498/1-151 98.5% 20.4% PFAHLTINAASIPSGSHKVTLSSWYHDRGWAKI---SNMTLSNGK--LRVNQDGFYYLYANICFRHHETSGS----VPTD 13 CD4L_BOVIN/1-1 97.0% 18.1% IAAHVISEASSKTT-----SVLQWAPKGYYTLS--NNLVTLENGK-QLAVKRQGFYYIYTQVTFCSNRETLS------QA 14 CD2L_HUMAN/1-1 93.9% 12.2% QLNHTGPQQDP---------RLYWQGGPALGRS-FLHGPELDKGQ--LRIHRDGIYMVHIQVTL--------------AI 15 CD3L_HUMAN/1-1 93.2% 14.8% SWAYLQVAKHLNKT------KLSWNKDGILH------GVRYQDGN--LVIQFPGLYFIICQLQFLVQCPNN-------SV 16 41BL_HUMAN/1-1 96.2% 15.5% MFAQLVAQNVLLIDG-----PLSWYSDPGLAGVSLTGGLSYKEDTKELVVAKAGVYYVFFQLELRRVVAGEG------SG 17 41BL_MOUSE/1-1 96.2% 16.8% VFAKLLAKNQASLCN----TTLNWHSQDGAGSSYLSQGLRYEEDKKELVVDSPGLYYVFLELKLSPTFTNTG-----HKV consensus/100% ....h..t...............a...............ph..st..hhl...GhYhl...h.h................ consensus/90% ...ph..t...............a..t...t.......hphppst..lhl.t.GhYhl..ph.h................ consensus/80% .htclhst...............W.ts.t.t.....tshphppsp..lhl.psGhYhla.ph.ht............... consensus/70% .hs+lhspt.t..........htW.sshths.....pshphpssp..LllppsGhYhla.plhap............... cov pid 81 . 1 . . . . : . 160 1 G2707219/1-133 100.0% 100.0% YLKLDLLVDGVLA------LRCLEE-FSATAASSL--------GPQLRLCQ-VSGLLALRPGSSLRIRT------LPWAH 2 TNFA_BOVIN/1-1 100.0% 16.4% FLTHTISRIAVSYQ---TKVNILSA-IKSPCHRETPEW--AEAKPWYEPIY-QGGVFQLEKGDRLSAEI------NLPDY 3 P79374/1-147 100.0% 14.4% VLTHKISRFTLSYQ---KKVTLLAN-IRSSCRKAAEDD--GEPSAWYEPVY-LAGVFQLTEGDKLVVDT------NYPEN 4 TNFC_HUMAN/1-1 100.0% 20.5% TLRSSLYRAGGAYG--PGTPELLLEGAETVTPVLDPARRQGYGPLWYTSVG-FGGLVQLRRGERVYVNI------SHPDM 5 TRAI_HUMAN/1-1 97.0% 14.7% KQMVQYIYKYTSY---PDPILLMKS-ARNSCWSKDA-------EYGLYSIY-QGGIFELKENDRIFVSV------TNEHL 6 OX4L_HUMAN/1-1 90.2% 5.9% EVNISLHYQKDEE---PLFQLKKVR-SVNSLMVASLT--------YKDKVY-LNVTTDNTSLDDFHVNG------GELIL 7 O02765/1-124 91.7% 6.0% EVSISLHYRKGEE---PFPILKKTK-FANSNVVLK--------LGYKDKVY-LNVTTDSASCKQLSVNA------GELIV 8 TNFB_BOVIN/1-1 100.0% 18.2% YLAHEVQLFSPQY---PFHVPLLSA-QKSVCPGPQ--------GPWVRSVY-QGAVFLLTRGDQLSTHT------DGISH 9 OX4L_MOUSE/1-1 93.2% 11.6% EVKIDLHFREDHN---PISIPMLNDGRRIVFTVVAS-------LAFKDKVY-LTVNAPDTLCEHLQIND------GELIV 10 FASL_HUMAN/1-1 96.2% 13.4% PLSHKVYMRNSKY---PQDLVMMEGKMMSYCTTG---------QMWARSSY-LGAVFNLTSADHLYVNV------SELSL 11 G2815624/1-148 98.5% 18.8% TITHGLYKRTPRY---PEELELLVS-QQSPCGRATSS-----SRVWWDSSF-LGGVVHLEAGEEVVVRV------LDERL 12 G2411498/1-151 98.5% 20.4% YLQLMVYVVKTSIKI-PSSHNLMKG-GSTKNWSGNS--------EFHFYSINVGGFFKLRAGEEISIQV------SNPSL 13 CD4L_BOVIN/1-1 97.0% 18.1% PFIASLCLKSPSG----SERILLRA-ANTHSSS----------KPCGQQSIHLGGVFELQSGASVFVNV------TDPSQ 14 CD2L_HUMAN/1-1 93.9% 12.2% CSSTTASRHHPTT----LAVGICSPASRSISLL--------RLSFHQGCTIVSQRLTPLARGDTLCTNL------TGTLL 15 CD3L_HUMAN/1-1 93.2% 14.8% DLKLELLINKHIK-----KQALVTV-CESGMQT-----------KHVYQNLSQFLLDYLQVNTTISVNV------DTFQY 16 41BL_HUMAN/1-1 96.2% 15.5% SVSLALHLQPLRSAAGAAALALTVDLPPASSEA-----------RNSAFGF-QGRLLHLSAGQRLGVHL------HTEAR 17 41BL_MOUSE/1-1 96.2% 16.8% QGWVSLVLQAKPQVDDFDNLALTVELFPCSMEN-----------KLVDRSW--SQLLLLKAGHRLSVGLRAYLHGAQDAY consensus/100% .....h.h.............hh....................................t..tph.ht............ consensus/90% ...hth.h.............hh.....s.....................h..thhh..t.sppl.hph........... consensus/80% .hthpl.h.t.t.......h.hh.t...s................hht.sh..shhh.Lptsppl.lph......st..h consensus/70% .lphplhhptsph.....tl.lhts.hpsss.s............ahppsh..uslhtLptucpl.lps......sp.th cov pid 161 . ] 179 1 G2707219/1-133 100.0% 100.0% LKAA----PFLTYFGLFQV 2 TNFA_BOVIN/1-1 100.0% 16.4% LDYA---ESGQVYFGIIAL 3 P79374/1-147 100.0% 14.4% LDFA---EPGQLYFGAIAL 4 TNFC_HUMAN/1-1 100.0% 20.5% VDFA----RGKTFFGAVMV 5 TRAI_HUMAN/1-1 97.0% 14.7% IDMD----HEASFFGAFLV 6 OX4L_HUMAN/1-1 90.2% 5.9% IHQN------PGEFCVL-- 7 O02765/1-124 91.7% 6.0% ILQN------PGGYCAP-- 8 TNFB_BOVIN/1-1 100.0% 18.2% LLLS----PSSVFFGAFAL 9 OX4L_MOUSE/1-1 93.2% 11.6% VQLT-------PGYCAPEG 10 FASL_HUMAN/1-1 96.2% 13.4% VNFE----ESQTFFGLYKL 11 G2815624/1-148 98.5% 18.8% VRLR---DGTRSYFGAFMV 12 G2411498/1-151 98.5% 20.4% LDPD----QDATYFGAFKV 13 CD4L_BOVIN/1-1 97.0% 18.1% VSHG----TGFTSFGLLKL 14 CD2L_HUMAN/1-1 93.9% 12.2% PSRN----TDETFFGVQWV 15 CD3L_HUMAN/1-1 93.2% 14.8% IDTS--TFPLENVLSIFLY 16 41BL_HUMAN/1-1 96.2% 15.5% ARHAWQLTQGATVLGLFRV 17 41BL_MOUSE/1-1 96.2% 16.8% RDWE-LSYPNTTSFGLFLV consensus/100% ...t.........hsh... consensus/90% h..t.......s.hsh... consensus/80% lphs.......shauhh.h consensus/70% lphs.....ttshFGhhhl