Family alignment for the TOPEUc domain, displayed in

                     cov    pid   1 [        .         .         .         .         :         .         .         . 80 
 1 TOP1_HUMAN     100.0% 100.0%     LFRGRGNHPKMGMLKRRIM-PEDIIINCSKDAKVPS---PPPGH-KWKEVRHDNKVTWLVSWTENIQGS-IKYIMLNPSS    
 2 TOP1_CRIGR     100.0%  98.7%     LFRGRGNHPKMGMLKRRIM-PEDIIINCSKDAKVPS---PPPGH-KWKEVRHDNKVTWLVSWTENIQGS-IKYIMLNPSS    
 3 Q12855         100.0% 100.0%     LFRGRGNHPKMGMLKRRIM-PEDIIINCSKDAKVPS---PPPGH-KWKEVRHDNKVTWLVSWTENIQGS-IKYIMLNPSS    
 4 TOP1_MOUSE     100.0%  98.9%     LFRGRGNHPKMGMLKRRIM-PEDIIINCSKDAKVPS---PPPGH-KWKEVRHDNKVTWLVSWTENIQGS-IKYIMLNPSS    
 5 Q12856         100.0%  99.5%     LFRGRGNHPKTGMLKRRIM-PEDIIINCSKDAKVPS---PPPGH-KWKEVRHDNKVTWLVSWTENIQGS-IKYIMLNPSS    
 6 P79994         100.0%  95.8%     LFRGRGNHPKMGMLKRRIM-PEDIIINCSKDSKVPP---PPPGH-KWKEVRHDNKVTWLVSWTENIQGS-IKYIMLNPSS    
 7 TOP1_XENLA     100.0%  90.7%     LFRGRGDHPKMGKLKKRIM-PEDIIINCSKDSKIPV---APAGH-KWKEVRHDGKVTWLVSWTENIQGS-IKYIMLNPSS    
 8 TOP1_DROME      95.8%  69.3%     LFRGRGEHPKMGMIKRRIQ-ASDVSINCGKDSKVPS---PPPGS-RWKEVRHDNTVTWLASWIENVQGQ-VKYIMLNPSS    
 9 Q27529          97.1%  66.5%     VFRGRGGHPKMGLIKKRIM-PEDVIINCGKDTEIPK---PPPGH-KWKEVRHDNTVTWLCSWTESVLGQ-NKYIMLNPSS    
10 TOP1_YEAST      98.1%  41.8%     LFRGRGAHPKTGKLKRRVN-PEDIVLNLSKDAPVPP---APEGH-KWGEIRHDNTVQWLAMWRENIFNS-FKYVRLAANS    
11 O60013          98.1%  43.8%     LFRGRGDHPKTGKLKTRVV-PEQVIINIGKDSVIPS---PPPGH-NWKEVRHDNTVTWLATWNENVNNN-VKYVFLSAGS    
12 O59891          98.1%  43.0%     LFKGRGEHPKKGTVKNRLR-PEDIIINIGKEAPIPV---PNIPG-QWKGIQHDNTVTWLAHWKENVNGN-AKYVFLSAGS    
13 TOP1_SCHPO      98.1%  41.0%     LFRGRGSHPKTGSLKRRVY-PEQITINIGEGVPVPE---PLPGH-QWAEVKHDNTVTWLATWHENINNN-VKYVFLAAGS    
14 O13463          98.1%  39.7%     LFRGRGEHPKTGRVKARVQ-PEQITINIGKEARVPP---PPEGH-KWKEVKHDQEGTWLAMWQENINGN-YKYVMLAANS    
15 CAU41342_1      98.1%  39.9%     LFRGRGAHPKTGKLKRRVV-SEQVTLNLGKDAKIPE---PPAGH-QWGEIRHDNEVTWLAMWKENISDS-LKYVRFANNS    
16 TOP1_CANAL      98.1%  39.7%     LFRGRGAHPKTGKLKRRVV-SEQVTLNLGKDAKIPE---PPAGH-QWGEIRHDNEVTWLAMWKENISDS-LKYVRFANNS    
17 JC6519          98.1%  38.1%     LFRGRGEHPKTGRVKARVQ-PEQITINIGKEARVPP---PPEGH-KWKEVKHDQEGTWLAMWQENINGN-YKYVMLAANS    
18 TOP1_ARATH      95.0%  44.7%     LFRGRGEHPKMGKLKKRIH-PCEITLNIGKGAPIPEC--PIAGE-RWKEVKHDNTVTWLAFWADPINPKEFKYVFLGAGS    
19 Q94705          98.1%  43.1%     LFLGRGAHPKTGLVKKRIE-AEDITINIGKGVPVPE---PPPGH-KWCKVVHDDKVAWLAMWKENINNG-FKYVWLHASS    
20 O24307          95.0%  44.7%     LFRGRGEHPKMGRLKKRIH-PSDIVINIGSEAQVPEC--PIPGE-GWKDIRNDNTVTWLCYWSDPINPKLFKYVFLAASS    
21 P93119          97.9%  41.1%     VVQRSWRASKDPQVKKNVYSQIDITINIGKDAPIPEP--PIPGE-RWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASS    
22 Q26024          99.2%  35.6%     LFRGRGEHPKQGLLKKRIF-PEDVVINISKDAPVPRLYDNMCGH-NWGDIYHDNKVTWLAYYKDSINDQ-IKYTFLSAQS    
23 TOP1_USTMA      98.1%  28.2%     LFLGRGAHPKAGKVKRRIS-PGDITINHSGDHPAPQ---PPAGMGDWAEVVEKKDVTWLAYWKENINGQ-YKYVFLDATS    
   consensus/100%                   lh.tphttsK.s.lKtpl....pl.lNhutt..hP....s..s..tWttl.pctpstWLs.a.-sl.st..KYhhhtstS    
   consensus/90%                    LFpGRGtHPKhGhlKpRl..spplhlNhucts.lP....s..Gp.pWt-lhHDppVTWLs.Wp-slpsp.hKYlhLsssS    
   consensus/80%                    LFRGRGtHPKhGhlK+Rl..spplhINhuK-u.lP....P.sGc.pWtEl+HDspVTWLs.WpEsIpsp.hKYlhLsssS    
   consensus/70%                    LFRGRGpHPKhGhlK+Rlh.PE-IhINhuK-u.lPp...PPsGH.pWpEl+HDNpVTWLs.WpENIpsp.hKYlhLsssS    

                     cov    pid  81          .         1         .         .         .         .         :         . 160
 1 TOP1_HUMAN     100.0% 100.0%     RIKGEKDWQKYETARRLKKCVDKIR-NQYREDWKSKEMKVRQ--------------------RAVALYFIDKLALRAGNE    
 2 TOP1_CRIGR     100.0%  98.7%     RIKGEKDWQKYETARRLKKCVDKIR-NQYREDWKSKEMKVRQ--------------------RAVALYFIDKLALRAGNE    
 3 Q12855         100.0% 100.0%     RIKGEKDWQKYETARRLKKCVDKIR-NQYREDWKSKEMKVRQ--------------------RAVALYFIDKLALRAGNE    
 4 TOP1_MOUSE     100.0%  98.9%     RIKGEKDWQKYETARRLKKCVDKIR-NQYREDWKSKEMKVRQ--------------------RAVALYFIDKLALRAGNE    
 5 Q12856         100.0%  99.5%     RIKGEKDWQKYETARRLKKCVDKIR-NQYREDWKSKEMKVRQ--------------------RAVALYFIDKLALRAGNE    
 6 P79994         100.0%  95.8%     RIKGEKDWQKYETARRLKKCVDKIR-NQYREDWKSKEMKVRQ--------------------RAVALYFIDKLALRAGNE    
 7 TOP1_XENLA     100.0%  90.7%     RIKGEKDWQKYETARRLKMCVEKIR-NTYKEDWKSKEMKVRQ--------------------RAVALYFIDKLALRAGNE    
 8 TOP1_DROME      95.8%  69.3%     KLKGEKDHIKYETARRLDKVIDKIR-ATYRDEWKSKEMRVRQ--------------------RAVALYFIDKLALRAGNE    
 9 Q27529          97.1%  66.5%     KIKGEKDFEKYETARRLKKKIGGIR-ERYTDDFKSKEMRVRQ--------------------RATALYFIDKLALRAGNE    
10 TOP1_YEAST      98.1%  41.8%     SLKGQSDYKKFEKARQLKSYIDAIR-RDYTRNLKSKVMLERQ--------------------KAVAIYLIDVFALRAGGE    
11 O60013          98.1%  43.8%     SLKGQSDLKKYEKARELKLYIDNIR-KQYRKELEDKLMEVRQ--------------------RATAMYLIDLFALRAGNE    
12 O59891          98.1%  43.0%     AWKGQSDRAKFEKARELIKHVDKIR-KDYTADLKSKIMADRQ--------------------RATALYFIDRLALRAGNE    
13 TOP1_SCHPO      98.1%  41.0%     SLKGQSDLKKYEKSRKLKDYIDDIR-KGYRKDLKNELTVERQ--------------------RGTAMYLIDVFALRAGNE    
14 O13463          98.1%  39.7%     DVKGQSDYKKFEKARELKKHIARIR-KDYQKNLKHELMVERQ--------------------KATAVYLIDQFALRAGNE    
15 CAU41342_1      98.1%  39.9%     SVKGQSDFKKFETARKLRDHVDSIR-KDYTKMLKSEKMQDRQ--------------------MATAMYLIDVFALRAGGE    
16 TOP1_CANAL      98.1%  39.7%     SVKGQSDFKKFETARKLRDHVDSIR-KDYTKMLKSEKMQDRQ--------------------MATAMYLIDVFALRAGGE    
17 JC6519          98.1%  38.1%     DVKGQSDYKKFEKARELKKHIARIR-KDYQKNLKHELMVERQKATAVYLIDQFALRAMVERQKATAVYLIDQFALRAGNE    
18 TOP1_ARATH      95.0%  44.7%     SLKGLSDKEKYEKARNLTDHIDNIR-TTYTKNFTAKDVKMRQ--------------------IAVATYLIDKLALRAGNE    
19 Q94705          98.1%  43.1%     AVKGRSDMKKFEVARKLKDHIEKIR-KKYLKELGSEELEERQ--------------------RATAIYLIDRLALRVGNE    
20 O24307          95.0%  44.7%     SLKGQSDKEKYEKARMLKDYIGNIR-AYYTKDFTSKDITKQQ--------------------IAVATYLIDKLALRAGNE    
21 P93119          97.9%  41.1%     SLKGKVTREKYEKSRKLKDYIEGIRAAAYTKDFASKDSKKRQ--------------------IAVATYLIDKLALRAGNE    
22 Q26024          99.2%  35.6%     KFKGYKDLMKYENARKLKSCVHKIR-EDYKNKMKNKNIIDKQ--------------------LGTAVYLIDFLALRVGGE    
23 TOP1_USTMA      98.1%  28.2%     NFKTNSDREKFEKARKLDTVVKQIR-RDVNKNLKSKVRHERQ--------------------IATIVCLIDNFSLRAGNE    
   consensus/100%                   thKs..sh.KaE.uR.L..hlttIR.t.h.t.httc....pQ....................hushhhhID.huLRsGsE    
   consensus/90%                    phKGppDhtKaEpARpLcphlttIR.ttYpcphpsc.h..RQ....................hAsAhYhID.hALRAGsE    
   consensus/80%                    plKGppDhpKaEpARcL+phlcpIR.ppYpcphcsc.hh.RQ....................hAsAhYhIDhhALRAGNE    
   consensus/70%                    plKGppDhpKaEpARcLKchl-pIR.ppYpcshKSK.hp.RQ....................hAsAhYhIDphALRAGNE    

                     cov    pid 161          .         .         .         2         .         .         .         . 240
 1 TOP1_HUMAN     100.0% 100.0%     KEEGETADTVGCCSLRVEHINLHPELDG-----------------------------QEYVVEFDFLGKDSIRYYNKVPV    
 2 TOP1_CRIGR     100.0%  98.7%     KEEGETADTVSCCSLRVEHINLHPELDG-----------------------------QEYVVEFDFPGKDSIRYYNKVPV    
 3 Q12855         100.0% 100.0%     KEEGETADTVGCCSLRVEHINLHPELDG-----------------------------QEYVVEFDFLGKDSIRYYNKVPV    
 4 TOP1_MOUSE     100.0%  98.9%     KEEGETADTVGCCSLRVEHINLHPELDG-----------------------------QEYVVEFDFPGKDSIRYYNKVPV    
 5 Q12856         100.0%  99.5%     KEEGETADTVGCCSLRVEHINLHPELDG-----------------------------QEYVVEFDFLGKDSIRYYNKVPV    
 6 P79994         100.0%  95.8%     KEEGETADTVGCCSLRVEHIKLHPELDG-----------------------------QEYVVEFDFLGKDSIRYYNKVPV    
 7 TOP1_XENLA     100.0%  90.7%     KEEGETADTVGCCSLRVEHINLFQELDG-----------------------------QEFVVEFDFPGKDSIRYYNKVPV    
 8 TOP1_DROME      95.8%  69.3%     KDE-DQADTVGCCSLRVEHVQLHKELNG-----------------------------KENVVVFDFPGKDSIRYYNEVEV    
 9 Q27529          97.1%  66.5%     KDVDEAADTVGCCSLRVEHIKLFDSAKLNEDDKKE----------------------KEFVVEFDFLGKDSIRYFNRVSV    
10 TOP1_YEAST      98.1%  41.8%     KSE-DEADTVGCCSLRYEHVTLKPPNTV----------------------------------IFDFLGKDSIRFYQEVEV    
11 O60013          98.1%  43.8%     KGE-DEADTVGCCSLRYEHISLSPPNTV----------------------------------VFDFLGKDSIRYYNEVQV    
12 O59891          98.1%  43.0%     KGE-DEADTVGCCSLRYEHVTLSPPNTI----------------------------------IFDFLGKDSMRFHQEVEV    
13 TOP1_SCHPO      98.1%  41.0%     KGE-DEADTVGCCSLRYEHVTLKPPRTV----------------------------------VFDFLGKDSIRYYNEVEV    
14 O13463          98.1%  39.7%     KGE-DEAETVGCCSLKYENVTLKPPNKV----------------------------------IFDFLGKDSIRFYDEVEV    
15 CAU41342_1      98.1%  39.9%     KGE-DEADTVGCCSLRYEHVTLKPPNKV----------------------------------IFDFLGKDSIRFYQEVEV    
16 TOP1_CANAL      98.1%  39.7%     KGE-DEADTVGCCSLRYEHVTLKPPNKV----------------------------------IFDLLGKDSIRFYQEVEV    
17 JC6519          98.1%  38.1%     KGE-DEAETVGCCSLKYENVTLKPPNKV----------------------------------IFDFLGKDSIRFYDEVEV    
18 TOP1_ARATH      95.0%  44.7%     KDD-DEADTVGCCTLKVGNVECIPPNKIK----------------------------------FDFLGKDSIQYVNTVEV    
19 Q94705          98.1%  43.1%     KDE-DTADTVGCCSLRVEHVTLKEPASVT----------------------------------LDFLGKDSMRYHNTVDV    
20 O24307          95.0%  44.7%     KDD-DEADTVGCCTLKVENVTRETPNKLK----------------------------------FNFLGKDSIKYENTVEV    
21 P93119          97.9%  41.1%     KDD-DEADTVGCCTLKVENVETKRPNILK----------------------------------FDFLGKDSIRYQNEVEV    
22 Q26024          99.2%  35.6%     KDIDEEADTVGCCSLRVEHISFAHDIPFKSVDSKEQKTNDEKVNKIPLPTNLESISSEDCYITLDFLGKDSIRYFNTVKI    
23 TOP1_USTMA      98.1%  28.2%     KGE-DETETYGVCSLRCEHAQIKMPDTIH----------------------------------LEFLGKDSMKFEEDLKI    
   consensus/100%                   Kt..-ts-ThusCoL+htphph.....h...................................hph.GKDShpa.ppl.l    
   consensus/90%                    Kt-.-pA-TVGCCoL+hEplph....ph...................................hDF.GKDSh+a.ppV.V    
   consensus/80%                    Kt-.-pADTVGCCSL+hEplplp...ph...................................FDFLGKDSIRaapcV.V    
   consensus/70%                    KtE.-pADTVGCCSLRhEHlsLcs..ph...................................FDFLGKDSIRaascV.V    

                     cov    pid 241          :         .         .         .         .         3         .         . 320
 1 TOP1_HUMAN     100.0% 100.0%     E-KRVFKNLQLFMEN------------KQPEDDLFDRLNT----------GILNKHLQDLMEGLTAKVFRTYNASITLQQ    
 2 TOP1_CRIGR     100.0%  98.7%     E-KRVFKNLQLFMEN------------KQPEDDLFDRLNT----------GILNKHLQDLMEGLTAKVFRTYNASITLQQ    
 3 Q12855         100.0% 100.0%     E-KRVFKNLQLFMEN------------KQPEDDLFDRLNT----------GILNKHLQDLMEGLTAKVFRTYNASITLQQ    
 4 TOP1_MOUSE     100.0%  98.9%     E-KRVFKNLQLFMEN------------KQPEDDLFDRLNT----------GILNKHLQDLMEGLTAKVFRTYNASITLQQ    
 5 Q12856         100.0%  99.5%     E-KRVFKNLQLFMEN------------KQPEDDLFDRLNT----------GILNKHLQDLMEGLTAKVFRTYNASITLQQ    
 6 P79994         100.0%  95.8%     E-KRVFKNLQLFMEN------------KQPEDDLFDRLNT----------SILNKHLQDLMEGLTAKVFRTYNASITLQQ    
 7 TOP1_XENLA     100.0%  90.7%     E-KRVFKNLQLFMEN------------KQPDDDLFDRLNT----------SILNKHLQDLMEGLTAKVFRTYNASITLQQ    
 8 TOP1_DROME      95.8%  69.3%     E-KRVFKNLELFMEH------------KKEGDDLFDRLNT----------QVLNEHLKELMEGLTAKVFRTYNASKTLQS    
 9 Q27529          97.1%  66.5%     E-KRVYKNLKIFMEG------------KAPSDDLFDRLDT----------ATLNDHLRSLMDGLTVKVFRTYNASITLQE    
10 TOP1_YEAST      98.1%  41.8%     D-KQVFKNLTIFKRP-----------PKQPGHQLFDRLDP----------SILNKYLQNYMPGLTAKVFRTYNASKTMQD    
11 O60013          98.1%  43.8%     D-PQVFKNLKIFKRS-----------PKTEGDMLFDRLNT----------SKLNNHLTSLMPGLSAKVFRTHNASYTMSE    
12 O59891          98.1%  43.0%     D-PQVFKNIKLFKAD-----------PKKKGDDIFDRLTT----------TLLNKHLNGMMPGLTAKVFRTYNASWTFQE    
13 TOP1_SCHPO      98.1%  41.0%     D-PQVFKNLKIFKRP-----------PKKEGDLIFDRLST----------NSLNKYLTSLMDGLSAKVFRTYNASYTMAE    
14 O13463          98.1%  39.7%     D-PQVFKNLKIFKKP-----------PKKEGDEIFDRLTT----------SALNKHLSQYMPGLTAKVFRTYNASHTMSE    
15 CAU41342_1      98.1%  39.9%     D-KQVFKNLRIFKKS-----------PKQPGDDLFDRINP----------SLVNRQLQNYMKGLTAKVFRTYNASKTMQD    
16 TOP1_CANAL      98.1%  39.7%     D-KQVFKNLRIFKKS-----------PKQPGDDLFDRINP----------SLVNRQLQNYMKGLTAKVFRTYNASKTMQD    
17 JC6519          98.1%  38.1%     D-PQVFKNLKIFKKP-----------PKKEGDEIFDRLTT----------SALNKHLSQYMPGLTAKVFRTYNASHTMSE    
18 TOP1_ARATH      95.0%  44.7%     E-PLVYKAIGQFQAG------------KSKTDDLFDELDT----------SKLNAHLKELVPGLTAKVFRTYNASITLDE    
19 Q94705          98.1%  43.1%     D-PRVFKNLSEFMYKGGNKKA-----PKKPENDLFDQLTT----------SSLNKYLKGFMENLSAKVFRTYNASLTLEK    
20 O24307          95.0%  44.7%     E-LPVYNAILKFQKD------------KGPGDDLFDKLDT----------NKLNAHLKELMPGLTAKVFRTFNASITLDD    
21 P93119          97.9%  41.1%     E-PRVFSAIEQFRSG------------KEGGDDLFDQLDT----------SKLNAHLKELMPGLTAKVFRTYNASITLDE    
22 Q26024          99.2%  35.6%     D-KQAYINIIIFCKN------------KNRDEGVFDQITC----------SKLNEYLKEIMPTLSAKVFRTYNASITLDQ    
23 TOP1_USTMA      98.1%  28.2%     TNPDVFKNIAMFLKSNGMKDKSGNYVRKKPSDPIFCAPESGSGKMQPLQPNSVNQFLSKYMKGLSAKVFRTYNASVTFQG    
   consensus/100%                   p...sa.sl..F...............Kt.tp.lFst.ps..........t.lNt.Lpthh.sLosKVFRTaNAShThtt    
   consensus/90%                    -..pVapslt.Fhts............Kp.t-.lFDplss..........s.lNtaLpphM.GLoAKVFRTYNAShThpp    
   consensus/80%                    -..pVFKNlphFhcs............Kp.tDplFDcLso..........shLNpaLpphM.GLoAKVFRTYNAShThpp    
   consensus/70%                    -..pVFKNLplFhcs............Kp.tD-LFDRLsT..........uhLNcaLpphM.GLTAKVFRTYNAShThpp    

                     cov    pid 321          .         .         :         .         .         .         .         4 400
 1 TOP1_HUMAN     100.0% 100.0%     QLKELTA-------------------------------------------------------------------------    
 2 TOP1_CRIGR     100.0%  98.7%     QLKELTA-------------------------------------------------------------------------    
 3 Q12855         100.0% 100.0%     QLKELTA-------------------------------------------------------------------------    
 4 TOP1_MOUSE     100.0%  98.9%     QLKELTA-------------------------------------------------------------------------    
 5 Q12856         100.0%  99.5%     QLKELTA-------------------------------------------------------------------------    
 6 P79994         100.0%  95.8%     QLKELTN-------------------------------------------------------------------------    
 7 TOP1_XENLA     100.0%  90.7%     QLDELTN-------------------------------------------------------------------------    
 8 TOP1_DROME      95.8%  69.3%     QLDLLTD-------------------------------------------------------------------------    
 9 Q27529          97.1%  66.5%     QLIKLTN-------------------------------------------------------------------------    
10 TOP1_YEAST      98.1%  41.8%     QLDLIPN-------------------------------------------------------------------------    
11 O60013          98.1%  43.8%     QLKNTPK-------------------------------------------------------------------------    
12 O59891          98.1%  43.0%     QLKNTPT-------------------------------------------------------------------------    
13 TOP1_SCHPO      98.1%  41.0%     ELKKMPK-------------------------------------------------------------------------    
14 O13463          98.1%  39.7%     LLKSMHA-------------------------------------------------------------------------    
15 CAU41342_1      98.1%  39.9%     QIDIIEN-------------------------------------------------------------------------    
16 TOP1_CANAL      98.1%  39.7%     QIDIIEN-------------------------------------------------------------------------    
17 JC6519          98.1%  38.1%     LLKSMHA-------------------------------------------------------------------------    
18 TOP1_ARATH      95.0%  44.7%     MLSQ----------------------------------------------------------------------------    
19 Q94705          98.1%  43.1%     ELAKMPE-------------------------------------------------------------------------    
20 O24307          95.0%  44.7%     KLNK----------------------------------------------------------------------------    
21 P93119          97.9%  41.1%     MVRCKLLSR-----------------------------------------------------------------------    
22 Q26024          99.2%  35.6%     QLKRIKEVYGKTTYSLYSGETELHKSKKRKSSHLTSDTNILSDASDSTINDVNNEYDENGINKKLSYATTVGKENDVDDK    
23 TOP1_USTMA      98.1%  28.2%     LLEQTEEWLKSRPN------------------------------------------------------------------    
   consensus/100%                   .l..............................................................................    
   consensus/90%                    .lp.h...........................................................................    
   consensus/80%                    .Lcph.t.........................................................................    
   consensus/70%                    pLcph.t.........................................................................    

                     cov    pid 401          .         .         .         .         :         .         .         . 480
 1 TOP1_HUMAN     100.0% 100.0%     ------PDENIPAKILSYNRANRAVAILCNHQRAPPKTFE-KSMMNLQTKIDAKKEQLA---------------------    
 2 TOP1_CRIGR     100.0%  98.7%     ------PDENVPAKILSYNRANRAVAILCNHQRAPPKTFE-KSMMNLQSKIDAKKDQLA---------------------    
 3 Q12855         100.0% 100.0%     ------PDENIPAKILSYNRANRAVAILCNHQRAPPKTFE-KSMMNLQTKIDAKKEQLA---------------------    
 4 TOP1_MOUSE     100.0%  98.9%     ------PDENVPAKILSYNRANRAVAILCNHQRAPPKTFE-KSMMNLQSKIDAKKDQLA---------------------    
 5 Q12856         100.0%  99.5%     ------PDENIPAKILSYNRANRAVAILCNHQRAPPKTFE-KSMMNLQTKIDAKKEQLA---------------------    
 6 P79994         100.0%  95.8%     ------PDDNIPAKILSYNRANRAVAILCNHQRAPPKTFE-KSMMNLQSKIDAKKEQLA---------------------    
 7 TOP1_XENLA     100.0%  90.7%     ------SDDNVPAKILSYNRANRAVAILCNHQRAPPKTFE-KSMMNLQGKIDAKKDQLA---------------------    
 8 TOP1_DROME      95.8%  69.3%     ------PSATVPEKLLAYNRANRAVAILCNHQRSVPKSHE-KSMENLKEKIKAKREAIE---------------------    
 9 Q27529          97.1%  66.5%     ------PKDNVAAKILSYNRANRQVAILCNHQRAVSKGFD-ESMQKLEQKIKDKKKEVK---------------------    
10 TOP1_YEAST      98.1%  41.8%     -------KGSVAEKILKYNAANRTVAILCNHQRTVTKGHA-QTVEKANNRIQELEWQKIRCKRAILQLDKDLLKKE-PKY    
11 O60013          98.1%  43.8%     -------DASISDKVLAYNRANRMVAILCNHQRTISKTHS-AQMERIEDKILALKYQKIRLRKAILTLDPKLEKSR-PDL    
12 O59891          98.1%  43.0%     -------NGTVAEKIAAYNTANRDVAILCNHQKSVSKGFE-GSFAKAEDKIRALKYQRLKLRLQLFSLNPKIKKKH-PEL    
13 TOP1_SCHPO      98.1%  41.0%     -------NLTLADKILFYNRANRTVAILCNHQRSVTKNHD-VQMERFAERIKALQYQRMRLRKMMLNLEPKLAKSK-PEL    
14 O13463          98.1%  39.7%     -------TGNNAEKVKAYNDANRKVAILCNHKRTVGAVTR-DQMEKMSERIKGQRYQKWRLKQMMLDLDPSLKKKKGAQF    
15 CAU41342_1      98.1%  39.9%     -------EGTVAEKVAKFNAANRTVAILCNHQRTVSKTHG-DSVQRINDKLKKFMWQKIRLKKMILQLEPKLKKKD-SKY    
16 TOP1_CANAL      98.1%  39.7%     -------EGTVAEKVAKFNAANRTVAILCNHQRTVSKTHG-DSVQRINDKLKKFMWQKIRLKKMILQLEPKLKKKD-SKY    
17 JC6519          98.1%  38.1%     -------TGNNAEKVKAYNDANRKVAILCNHKRTVGAVTR-DQMEKMSERIKGQRYQKWRLKQMMLDLDPSLKKKKGAQF    
18 TOP1_ARATH      95.0%  44.7%     ---E-TKDGDVTQKIVVYQKANKEVAIICNHQRTVSKTHG-AQIEKLTARIEELKEVLKELKTNLDRAK-----------    
19 Q94705          98.1%  43.1%     ----SLIKATADEKVLFYNRCNREVAILCNHQRSLSKTHT-ETMGKIDEKIAEFKKEKLQQQIAYLKGKGKKPVLS----    
20 O24307          95.0%  44.7%     ---D-TKDGDAAEKIVVYQHANKQVAIICNHQRSVSKSHS-AQMTKLNEKIDELQDVLKELKVDLDRAR-----------    
21 P93119          97.9%  41.1%     ---E-TKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHS-AQMVRLNEKIEELKGLLKELQEDLTRVN-----------    
22 Q26024          99.2%  35.6%     NSPIEVDVSNINELINFYNNANREVAILCNHQRSIPKQHD-TTMSKIKKQIELYNEDIKEYKKYLQHLKKN---------    
23 TOP1_USTMA      98.1%  28.2%     ---AAEREINQTNLRLAYNEANRQVAILCNHQKTVNPMLLNRNLERTQDKIFQIRYEIMKEQQKILTFHKVSELKKEFKV    
   consensus/100%                   .........s.sthh..aptsN+.VAIlCNHp+s.s..h...ph.phttpl......h......................    
   consensus/90%                    .......pts.stKlh.YptAN+tVAIlCNHQRs.stsht.tph.phpp+Itthp..hh.....................    
   consensus/80%                    .......ptshstKlh.YNpANRtVAILCNHQRsssKsat.tph.phpp+Icthp.phh.....................    
   consensus/70%                    .......stslstKllsYNcANRtVAILCNHQRsssKsap.ppM.plppKIcth+.phh.....................    

                     cov    pid 481          .         5         .         .         .         .         :         . 560
 1 TOP1_HUMAN     100.0% 100.0%     ---------------DARR-----------------DLKSA------KADAKV---------------------------    
 2 TOP1_CRIGR     100.0%  98.7%     ---------------DARR-----------------DLKSA------KADAKV---------------------------    
 3 Q12855         100.0% 100.0%     ---------------DARR-----------------DLKSA------KADAKV---------------------------    
 4 TOP1_MOUSE     100.0%  98.9%     ---------------DARR-----------------DLKSA------KADAKV---------------------------    
 5 Q12856         100.0%  99.5%     ---------------DARR-----------------DLKSA------KADAKV---------------------------    
 6 P79994         100.0%  95.8%     ---------------DARR-----------------ELKSA------KADAKV---------------------------    
 7 TOP1_XENLA     100.0%  90.7%     ---------------DARR-----------------EFKSA------KADAKV---------------------------    
 8 TOP1_DROME      95.8%  69.3%     ---------------KCES-----------------EYHS----------------------------------------    
 9 Q27529          97.1%  66.5%     ---------------EAEA-----------------ALKSA------RGAEK----------------------------    
10 TOP1_YEAST      98.1%  41.8%     FEE-----------IDDLTKEDEATIHKRIIDREIEKYQRKFVRENDKRKFEK---------------------------    
11 O60013          98.1%  43.8%     SEA-----------VSDIDEDWIKEHQKVLIEKEYDKIKRKFQKDNEKLISQN---------------------------    
12 O59891          98.1%  43.0%     AED-----------ESDVDDEFMERHEAELLEKALENAKKKWDTDNVKLEGDG---------------------------    
13 TOP1_SCHPO      98.1%  41.0%     LAK-----------EEGITDSWIVKHHETLYELEKEKIKKKFDRENEKLAAEDP--------------------------    
14 O13463          98.1%  39.7%     FEL-----------DEDIDKEWIKEHQAFLIEEQAQKIKKKFEKDNEKLLAEG---------------------------    
15 CAU41342_1      98.1%  39.9%     FEE-----------IDDLLKEDIEHIHHTIIKRQREQAKKKLERDNEKLKLEG---------------------------    
16 TOP1_CANAL      98.1%  39.7%     FEE-----------IDDLIKEDIEHIHHTIIKRQREQAKKKLERDNEKLKLEG---------------------------    
17 JC6519          98.1%  38.1%     FEL-----------DEDIDKEWIKEHQAFLIEEQAQKIKKKFEKDNEKLLAEG---------------------------    
18 TOP1_ARATH      95.0%  44.7%     ---------------KGKP-----------------PLEGSDGK------------------------------------    
19 Q94705          98.1%  43.1%     ---------------DSESDEDTPKKATPKKATPKKETKSSDEATPNKKRKKD---------------------------    
20 O24307          95.0%  44.7%     ---------------KGKS-----------------PTKSSDGK------------------------------------    
21 P93119          97.9%  41.1%     ---------------KGKP-----------------PLKNSDGKPKRNLNLKR---------------------------    
22 Q26024          99.2%  35.6%     ---------------SDKK----------------FIFVSKVSTLDGTLRPNK---------------------------    
23 TOP1_USTMA      98.1%  28.2%     KEHPFMKQFDKIMQKQDLDAEKVKQYEEQMISDKKSKLESTFKRQQSELQYQLEQKGLTGDDGTPKKGKKAKNVEEEVRS    
   consensus/100%                   ...............ps....................h.t........................................    
   consensus/90%                    ...............ps....................hcpt.......................................    
   consensus/80%                    ...............csht.................th+pt......ph..p............................    
   consensus/70%                    ...............cshp.................phKpt......+hthc............................    

                     cov    pid 561          .         .         .         6         .         .         .         . 640
 1 TOP1_HUMAN     100.0% 100.0%     ------------------MKDAKTKKVVESKKK---------------AVQRLEEQLMKLEVQATDREENKQIALGTSKL    
 2 TOP1_CRIGR     100.0%  98.7%     ------------------MKDAKTKKVVESKKK---------------AVQRLEEQLMKLEVQATDREENKQIALGTSKL    
 3 Q12855         100.0% 100.0%     ------------------MKDAKTKKVVESKKK---------------AVQRLEEQLMKLEVQATDREENKQIALGTSKL    
 4 TOP1_MOUSE     100.0%  98.9%     ------------------MKDAKTKKVVESKKK---------------AVQRLEEQLMKLEVQATDREENKQIALGTSKL    
 5 Q12856         100.0%  99.5%     ------------------MKDAKTKKVVESKKK---------------AVQRLEEQLMKLEVQATDREENKQIALGTSKL    
 6 P79994         100.0%  95.8%     ------------------RRDEKSKKAVESKKK---------------AVQRIEEQLMKLEVQATDREENKQIALSTSKL    
 7 TOP1_XENLA     100.0%  90.7%     ------------------RRDEKTKKLVESKKK---------------AVQRIEEQLMKLEVQATDREENKQIALGTSKL    
 8 TOP1_DROME      95.8%  69.3%     -------------------RDEKKGK----------------------QLERLRDQLKKLELQETDRDENKTIALGTSKL    
 9 Q27529          97.1%  66.5%     ---------------------EKAQK----------------------KYDRLKEQLKKLKISRTDKDENKQIALGTSKL    
10 TOP1_YEAST      98.1%  41.8%     --EELLPESQLKEWLEKVDEKKQEFEKELKTGEVELKSSWNSVEKIKAQVEKLEQRIQTSSIQLKDKEENSQVSLGTSKI    
11 O60013          98.1%  43.8%     --ETPMPESRLEKFLEKINEMKEEFKIENEKGRVESKTRGITIETLDLQIKKINERIHQMKALMIDKAQNKTTALGTSKI    
12 O59891          98.1%  43.0%     --KKKKTKGELDERLSEIKAEFKELKKERKAKKIDPKRG-ATEEKLLAQIARIDERIATAKVQLQDRDKLKDVALGTSKI    
13 TOP1_SCHPO      98.1%  41.0%     --KSMLPESELEVRLKAADELKKALDAELKSKKVDPGRS--SMEQLEKRLNKLNERINVMRTQMIDKDENKTTALGTSKI    
14 O13463          98.1%  39.7%     --EKEMKASELETRLEAVKELEKKFNKENKTGKVEAEGRSPTVEKLEASITKLQQRIENMELQAQDKEDNKEVALGTSKI    
15 CAU41342_1      98.1%  39.9%     --KPLLTESDIKDKLDKIDELEKEYQKELKTGKPIVTKNA-TVEKLKQQIETLENKILNVSIQLKDKEDNSEVSLGTSKM    
16 TOP1_CANAL      98.1%  39.7%     --KPLLTESDIKDKLDKIDELEKEYQKELKTGKPIVTKNA-TVEKLKQQIETLENRILNVSIQLKDKEDNSEVSLGTSKM    
17 JC6519          98.1%  38.1%     --EKEMKASELETRLEAVKELEKKFNKENKTGKVEAEGRSPTVEKLEASITKLQQRIENMELQAQDKEDNKEVALGTSKI    
18 TOP1_ARATH      95.0%  44.7%     --------------------KIRSLEPNAWEKK----------------IAQQSAKIEKMERDMHTKEDLKTVALGTSKI    
19 Q94705          98.1%  43.1%     ------------------DDEEEADDFKETPKKKVKRALPDSVEKCKAAIERVDTSINKWNIKKTEKDELKSVALTTSKI    
20 O24307          95.0%  44.7%     --------------------SKRSLTPEVLEKK----------------ISQTNAKIEKMQRDMKTKVDLKTVALGTSKI    
21 P93119          97.9%  41.1%     ------YKGKL-LKLIQKLRKWSETRRLSVTKK----------------IAQTNTKIEKMERDKETKEDLKTVALGTSKI    
22 Q26024          99.2%  35.6%     --------------------VKENMKEESCKKK---------------LIT-LIKKVELLNNQMKVRDDNKTIALGTSKI    
23 TOP1_USTMA      98.1%  28.2%     SIKGFKDKKQVDEELKALNETAKRLEKERKTNK--SQATSCNFVSSAKKILSKYEMIKKQEAELVNKNNTSDVALSTSKL    
   consensus/100%                   ......................pt.p.......................h....t.l...p.....+.p.pphuLsTSKh    
   consensus/90%                    ......................cthp.....tc................ltphpppl.phphph.s+pc.ppluLuTSKl    
   consensus/80%                    ...................t.tcphp....ptK...............tlpplpppl.phphphps+--.KplALGTSKl    
   consensus/70%                    ...................c.t+phch..pptK...............tlpplpppl.phchphpD+--NKplALGTSKl    

                     cov    pid 641          :     ] 656
 1 TOP1_HUMAN     100.0% 100.0%     NYLDPRITVAWCKKWG    
 2 TOP1_CRIGR     100.0%  98.7%     NYLDPRITVAWCKKWG    
 3 Q12855         100.0% 100.0%     NYLDPRITVAWCKKWG    
 4 TOP1_MOUSE     100.0%  98.9%     NYLDPRITVAWCKKWG    
 5 Q12856         100.0%  99.5%     SYLDPRITVAWCKKWG    
 6 P79994         100.0%  95.8%     NYLDPRISVAWCKKWG    
 7 TOP1_XENLA     100.0%  90.7%     NYLDPRISVAWCKKYG    
 8 TOP1_DROME      95.8%  69.3%     NYLDPRISVAWCKKHD    
 9 Q27529          97.1%  66.5%     NYIDPRITVAWCKKFE    
10 TOP1_YEAST      98.1%  41.8%     NYIDPRLSVVFCKKYD    
11 O60013          98.1%  43.8%     NYIDPRLTYAWCAKYG    
12 O59891          98.1%  43.0%     NYIDPRLTVAWAKKFD    
13 TOP1_SCHPO      98.1%  41.0%     NYIDPRLTYSFSKRED    
14 O13463          98.1%  39.7%     NYIDPRLTVVFSKKFK    
15 CAU41342_1      98.1%  39.9%     NYIDPRLIVMFSKKFD    
16 TOP1_CANAL      98.1%  39.7%     NYIDPRLIVMFSKKFD    
17 JC6519          98.1%  38.1%     NYIDPRLTVVFSKKFK    
18 TOP1_ARATH      95.0%  44.7%     NYLDPRITVAWCKRHE    
19 Q94705          98.1%  43.1%     NYIDPRITAAWAKRVG    
20 O24307          95.0%  44.7%     NYLDPRITVAWCKRHE    
21 P93119          97.9%  41.1%     NYLDPRITVAWCKRHD    
22 Q26024          99.2%  35.6%     NYMDPRITVAFCKKFE    
23 TOP1_USTMA      98.1%  28.2%     NYIDPRITLAWLKEWD    
   consensus/100%                   sYhDPRl.h.a.tc.t    
   consensus/90%                    NYlDPRlohsasK+at    
   consensus/80%                    NYlDPRloVsasK+at    
   consensus/70%                    NYlDPRlTVAasKKas