cov    pid  1 [        .         .         .         .         :         .         .         . 80 
 1 RAD3A_ARATH/1088-1194  100.0% 100.0%    LPGFLQNHFVGLLNSIDRKMLHAD----DIFLQKQALKRIKLLIE-MMGHYLSTYVPK----LMVLLMHAIEKDA---LQ    
 2 Q5Z987_ORYSA/1112-1218 100.0%  65.4%    LPEFLKNDFVRLLNSIDKKMLHSS----DVNLQKQALQRIRKLVE-MMGPYLSTHAPK----IMVLLIFAIDKET---LQ    
 3 Q54ER4_DICDI/1531-1634  96.3%  21.3%    FDKFLIKEFLGSMNFFTMIMTNKQ---KSTQEKLTMMTSFHRLLG-LMGQSVDLFRPK----IMAFLRLAIKTP----ME    
 4 RAD3_SCHPO/862-968      97.2%  13.6%    LYDFFNNHILGILAEFSNILNDLK-GKTSINEKIKTIVGIEKMLS-LCGGAVKLGLPQ----ILSNLQSAFQNEH---LR    
 5 ATR_MOUSE/1119-1225     97.2%  20.0%    MADYLQPKLLGILAFFNMQLLSSS---VGIEDKKMALTSLMSLMKLMGPKHVSSVRVK----MMTTLRTGLRFKDD--FP    
 6 Q4RE20_TETNG/416-523    95.3%  17.7%    MADYLQPKLLGILAFFNMQLLSSSAGEKNR--KKLALTSVMELMRLMGSKHISTVRVK----MMTTLRTGLRYRED--FP    
 7 Q7Q0G1_ANOGA/211-319    95.3%  15.8%    IAEYIAERFLGVLANLEATLVNPD-GEKFL--KRLALLSLGDIIRLLGGEHITPFRFK----VIAVLRTALALPEGLALA    
 8 Q24135_DROME/792-899    94.4%  13.2%    FANFIAERFLGVITYFESCLSEPS-FEKPL--KEETLYSLGQIMRFVGSQHVTQFRFKII-AMLSFVHT-LQEPR---LQ    
 9 Q6C0Z0_YARLI/486-594    96.3%  16.1%    -ESLLKGTMLSLMLHVANILENPH----TVDEKTSALRALQKVTL-SVSKEISAIFPQ----LFVCLQSAIEVPE---LR    
10 Q5KGM7_CRYNE/412-522    97.2%  18.4%    LGAFLKPYMLGVISQLNDMLHDVL-GKKSVEYKKKIIRSMGVLIK-LVGDSMSSFSPQLTIQIMASLQSTLGIKE---LR    
11 Q4PFK3_USTMA/1055-1161  97.2%  23.6%    VATFLKGEILAILTWINQELSGEH-GRRTATDLAFALRSIGALVE-IIGPPISAVTPQ----IMATLNSHLEPDA---LS    
12 Q5AXK5_EMENI/762-868    97.2%  15.5%    VGHFIEEHVLGIITQFAHAINDFQ-IRQPLVEKKRNIMAIGAMIK-VAPGHVSSALPQ----ICACLRSALEIKE---LC    
13 Q4W9I9_ASPFU/841-947    97.2%  14.5%    LCHFIEEHVLGIITQFAHAINDFQ-IRQPLIEKRRNILAIGEMIK-VARGHISSALPQ----ICACLRSALSIEE---LS    
14 Q51M85_MAGGR/796-903    97.2%  16.2%    VARYLQIHALGLTATIAETLKESSSTHYPVHERKRSLRAMEEMIK-LCRFFIRIARPQ----ITAVLLTALAYDE---LR    
15 Q4I275_GIBZE/819-923    97.2%  13.0%    TARFIHSSLLGLMARLFDVINDQN---LPDPERRCYIRAMEEMIR-VSRGYASTARPQ----ISACLLSTLAQDA---LR    
16 Q6CT34_KLULA/784-891    97.2%  15.3%    FQQKLEQNVLGIFQVFSNDMHDSD-GKTSYYEKLRVLNGISFLMKYASKKSIISALAQ----LSICLQTGSEIPE---IQ    
17 Q75DB8_ASHGO/843-950    97.2%  11.7%    FQKKLKDNILGIFQVFSSDMHDIE-GKTTYFEKLRVISGISFLIKYASKECIISALAQ----VSICLQTGLEIPE---MR    
18 MEC1_YEAST/872-979      97.2%  13.5%    FQKKLQDNILGIFQVFSSDIHDVE-GRTTYYEKLRVINGISFLIIYAPKKSIISALAQ----ISICLQTGLGLKE---VR    
19 Q6FX42_CANGA/884-991    97.2%  11.7%    FQNNLQDNILGIFQVFSSDMHDVE-GKTTYYEKLRVINGISFLVKHASNKCIISALAQ----LSICLQSGLEIPE---VR    
20 Q6BND8_DEBHA/885-991    97.2%  11.8%    IENLLGDHVLELVQRFSENVHHIK-GTKPYLEKVSSLRAIEFLIS-NNTAAAASALGQ----ISTCLQATLENPD---FE    
21 Q59LR2_CANAL/847-953    97.2%  12.7%    INDLIEDQVLLLVQKFSDVTHSSR-GAKPYLELKNSFYAIEFLIK-GHIDAITSALGQ----LSTCLQATLEEPN---FH    
   consensus/100%                          ..t.h...hl..h..h...h.t..............h.th..hh.......h..h..p....h...l....t......h.    
   consensus/90%                           h.phlt.phLtlht.ht..h.p.p....sh..ph..l.uht.hht.h....h..hhsp....h.hhL.tslt..t...ht    
   consensus/80%                           htphlptphLulht.hsp.h.p.p....sh..+hpsl.ult.hhp.h.tt.ltshhsp....l.ssLpsslt..p...hp    
   consensus/70%                           htphlppphLGlht.hspthps.p.htpsh.-Khpslpult.llc.hstttlsshhsp....l.ssLpouLph.c...lp    

                             cov    pid 81          .         1         .         .    ] 125
 1 RAD3A_ARATH/1088-1194  100.0% 100.0%    SEGLLVLHFFTRKLADVSPSS--IKYVISQIFAALIPF----LEK    
 2 Q5Z987_ORYSA/1112-1218 100.0%  65.4%    MDGLDVLHFFIKRLAEVSCTS--IKYVMSQVVAAFIPS----LER    
 3 Q54ER4_DICDI/1531-1634  96.3%  21.3%    EIAIDAWFTFIQLLKL---DS--IGPILNQIVFSILPF----VQS    
 4 RAD3_SCHPO/862-968      97.2%  13.6%    FYAIKAWFSLILATKE---PE--YSSIAGLSLVILPPL----FPY    
 5 ATR_MOUSE/1119-1225     97.2%  20.0%    ELCCRAWDCFVRCLDH---AY--LGPLLSHVIVALLPL----IHM    
 6 Q4RE20_TETNG/416-523    95.3%  17.7%    LLCCQMWECFVKSVEP---AH--LGPLLSHVIVALLPL----IPL    
 7 Q7Q0G1_ANOGA/211-319    95.3%  15.8%    KHCVNTWRIFVCTVDV---RQ--LGSLLSTIFVTLEPL----IDT    
 8 Q24135_DROME/792-899    94.4%  13.2%    RICLKIWHIFLHVVNV---QE--LGPSLGRIVATLQPL----LAD    
 9 Q6C0Z0_YARLI/486-594    96.3%  16.1%    SSCVELLICLGKYLPE---EHYLIASLFTGWLSLIGSRDRQLINK    
10 Q5KGM7_CRYNE/412-522    97.2%  18.4%    HETLNTWAVFTSTLKY---AD--IGPFVGRTTGALVAN----WPT    
11 Q4PFK3_USTMA/1055-1161  97.2%  23.6%    LATLESWKIFIRTLRF---DD--VGPFVGQTAAALLSA----WDR    
12 Q5AXK5_EMENI/762-868    97.2%  15.5%    NNAFRVWGVLVSSLHK---EE--VEPLLDQTLAIVIKH----WVT    
13 Q4W9I9_ASPFU/841-947    97.2%  14.5%    DHAFSAWSVLVSSLHE---EE--LEPLIDQTFSIVIRY----WDA    
14 Q51M85_MAGGR/796-903    97.2%  16.2%    SAAMSCWAVLLTNLED---DD--VDALLETTFFIIGQY----WQL    
15 Q4I275_GIBZE/819-923    97.2%  13.0%    EASFSCWVSMLTHLGS---ED--VEALLETTFFVVTRY----WPS    
16 Q6CT34_KLULA/784-891    97.2%  15.3%    HNTLECWHLLIKLLNE---EQ--ITAIINDLFCLILQK----WST    
17 Q75DB8_ASHGO/843-950    97.2%  11.7%    YNTLRCWLHLVKYLSE---EE--LSTVIDVLICFILQK----WDE    
18 MEC1_YEAST/872-979      97.2%  13.5%    YEAFRCWHLLVRHLND---EE--LSTVIDSLIAFILQK----WSE    
19 Q6FX42_CANGA/884-991    97.2%  11.7%    YLSMRCWFLLIQRLNE---EE--LTTVIDAPVAFILRK----WPT    
20 Q6BND8_DEBHA/885-991    97.2%  11.8%    LPAIRCWNVLVQNLQT---NH--LISLFDIIISLIFQK----FNK    
21 Q59LR2_CANAL/847-953    97.2%  12.7%    VLSLRCWNELIKKVPP---SH--LISLIDIIISIILQK----FES    
   consensus/100%                          ..sh..h..hh..h.........h...ht..h..h.......h..    
   consensus/90%                           ..shphh..hhp.lt....tp..ltshhs.hh.hl..h....h..    
   consensus/80%                           ..shpsW.hhlp.lt....pp..ltsllsthhshlh.h....h.t    
   consensus/70%                           ..shpsWthhlppLp....pc..ltsllsphhshlh.h....hsp